low-density lipoprotein receptor-like
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016312 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13Note: Hover over icons to view figure legend
Homology
BLAST of low-density lipoprotein receptor-like vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 367.081 bits (941), Expect = 1.129e-111 Identity = 256/759 (33.73%), Postives = 369/759 (48.62%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI----ENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRV 2340
RC R +F CQ+GKCI CDG C D SDE + + TC + I + CDG+ DCDN D + C CS D+F C CIS+ +C+ + DC DGSDE+ +C ++ P QC++S CI +++ CD DC D SDE + + L S+ C EF+C +G CI WRCDG DC + DE NC+ C PD+ +C +C ++CD DC D SDE C N + C+ N+FKC + CI +VC+ DC D SDE + C N C NNG C C + +CLC G+++ + + +C DIDEC D CS C N G YKC+C EGF + K C AVG +L ++ ++ +R++ L R Y ++ + +N + +D + S I+W+ + ++ L G T++ I +P GLA DWIH ++W+D +SV + RKTL R N SK R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ AH F + VFED ++ +D NE I ++ TG L++ P + LFH L QP + N CQYLCLP + KF C CPD L D ++C T++E T S+ LK + V
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG--KCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCNSST---------CIPQLWACDNDPDCEDGSDEW--------PQRCRGLYVFQGDSSPCSAFEFHCLSGE---CIHSSWRCDGGPDCKDK-SDEENCAVATCRPDE-FQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVTL----CEGPNKFKC-HSGECITLDKVCNMARDCRDWSDE----PIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNV------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL-TEAEAAVATQETSTVRLKVSSTAV 736
BLAST of low-density lipoprotein receptor-like vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 366.696 bits (940), Expect = 1.340e-111 Identity = 256/759 (33.73%), Postives = 369/759 (48.62%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI----ENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRV 2340
RC R +F CQ+GKCI CDG C D SDE + + TC + I + CDG+ DCDN D + C CS D+F C CIS+ +C+ + DC DGSDE+ +C ++ P QC++S CI +++ CD DC D SDE + + L S+ C EF+C +G CI WRCDG DC + DE NC+ C PD+ +C +C ++CD DC D SDE C N + C+ N+FKC + CI +VC+ DC D SDE + C N C NNG C C + +CLC G+++ + + +C DIDEC D CS C N G YKC+C EGF + K C AVG +L ++ ++ +R++ L R Y ++ + +N + +D + S I+W+ + ++ L G T++ I +P GLA DWIH ++W+D +SV + RKTL R N SK R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ AH F + VFED ++ +D NE I ++ TG L++ P + LFH L QP + N CQYLCLP + KF C CPD L D ++C T++E T S+ LK + V
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG--KCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCNSST---------CIPQLWACDNDPDCEDGSDEW--------PQRCRGLYVFQGDSSPCSAFEFHCLSGE---CIHSSWRCDGGPDCKDK-SDEENCAVATCRPDE-FQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVTL----CEGPNKFKC-HSGECITLDKVCNMARDCRDWSDE----PIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNV------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL-TEAEAAVATQETSTVRLKVSSTAV 736
BLAST of low-density lipoprotein receptor-like vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 367.851 bits (943), Expect = 3.539e-111 Identity = 256/759 (33.73%), Postives = 369/759 (48.62%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI----ENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRV 2340
RC R +F CQ+GKCI CDG C D SDE + + TC + I + CDG+ DCDN D + C CS D+F C CIS+ +C+ + DC DGSDE+ +C ++ P QC++S CI +++ CD DC D SDE + + L S+ C EF+C +G CI WRCDG DC + DE NC+ C PD+ +C +C ++CD DC D SDE C N + C+ N+FKC + CI +VC+ DC D SDE + C N C NNG C C + +CLC G+++ + + +C DIDEC D CS C N G YKC+C EGF + K C AVG +L ++ ++ +R++ L R Y ++ + +N + +D + S I+W+ + ++ L G T++ I +P GLA DWIH ++W+D +SV + RKTL R N SK R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ AH F + VFED ++ +D NE I ++ TG L++ P + LFH L QP + N CQYLCLP + KF C CPD L D ++C T++E T S+ LK + V
Sbjct: 111 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG--KCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCNSST---------CIPQLWACDNDPDCEDGSDEW--------PQRCRGLYVFQGDSSPCSAFEFHCLSGE---CIHSSWRCDGGPDCKDK-SDEENCAVATCRPDE-FQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVTL----CEGPNKFKC-HSGECITLDKVCNMARDCRDWSDE----PIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNV------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL-TEAEAAVATQETSTVRLKVSSTAV 821
BLAST of low-density lipoprotein receptor-like vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 367.466 bits (942), Expect = 5.130e-111 Identity = 256/761 (33.64%), Postives = 369/761 (48.49%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI----ENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNV 2346
RC R +F CQ+GKCI CDG C D SDE + + TC + I + CDG+ DCDN D + C CS D+F C CIS+ +C+ + DC DGSDE+ +C ++ P QC++S CI +++ CD DC D SDE + + L S+ C EF+C +G CI WRCDG DC + DE NC+ C PD+ +C +C ++CD DC D SDE C N + C+ N+FKC + CI +VC+ DC D SDE + C N C NNG C C + +CLC G+++ + + +C DIDEC D CS C N G YKC+C EGF + K C AVG +L ++ ++ +R++ L R Y ++ + +N + +D + S I+W+ + ++ L G T++ I +P GLA DWIH ++W+D +SV + RKTL R N SK R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ AH F + VFED ++ +D NE I ++ TG L++ P + LFH L QP + N CQYLCLP + KF C CPD L D ++C T++E T S+ LK + V
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG--KCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCNSST---------CIPQLWACDNDPDCEDGSDEW--------PQRCRGLYVFQGDSSPCSAFEFHCLSGE---CIHSSWRCDGGPDCKDK-SDEENCAVATCRPDE-FQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVTL----CEGPNKFKC-HSGECITLDKVCNMARDCRDWSDE----PIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNV------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL-TEAEAAVATQETSTVRLKVSSTAVRT 738
BLAST of low-density lipoprotein receptor-like vs. Ensembl Human
Match: LRP4 (LDL receptor related protein 4 [Source:HGNC Symbol;Acc:HGNC:6696]) HSP 1 Score: 369.392 bits (947), Expect = 2.428e-107 Identity = 255/752 (33.91%), Postives = 362/752 (48.14%), Query Frame = 1
Query: 127 CRRFQFLCQNGK-----CIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCD----NSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDS---------ENSKSKSQSLADLVKQSTI-----------------CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNL----CKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMK-PRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPK--PMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICP 2226
C R F C CIP CDG ++CGD+SDE C + F C + I ++ +CDG DC++D D + C +C D+F C+ CI C+ +NDC D SDE QCD + F+C + CI+ +YCDG +DC D SDE+NCP + E + + + D+ C++ EF C +G CI WRCDG DC + DE NC+ C+ ++ RC + C RCDG DC DNSDEE C N + D +F C N CI +++C+ NDCGD SDE P +NC C +NNG C QKC +C C GYR+ T C D++ECA+ CS C N G+++C C G+ + D + C A+G E LL++ + IR++ R Y +L + +N I +DF ++ + +FW+ V +D ++ N +V + + SP GLA DW+H L+W+D + I V N+ RK L+ N K R+I +HP I+WTDWG P+IE MDG R+++ L+ PNGL +DY +YWVDAK I NL R+ V+S H F I VFED LY +DW + I +K TGK + ++ + PM + H QP +N C N C +LCLP+ N + C CP
Sbjct: 27 CGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCILPTCSPLD-FHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNG--YCIRSLWHCDGDNDCGDNSDE--------------QCDMRKCSDKEFRCSDGS-CIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCDSGL---CINAGWRCDGDADC-DDQSDERNCTTSMCTAEQ-FRCHS-GRCVRLSWRCDGEDDCADNSDEENCENTGSPQCALD---QFLCW-NGRCIGQRKLCNGVNDCGDNSDESP---QQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLTEDGHT-CQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENA------IALDFHHRRELVFWSD-------VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQNLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAG-KNRCGDNNGGCTHLCLPSGQN------YTCACP 725 HSP 2 Score: 184.111 bits (466), Expect = 1.469e-46 Identity = 119/409 (29.10%), Postives = 178/409 (43.52%), Query Frame = 1
Query: 1069 KNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLV-SKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTG--KQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFF 2286
KN C NNG C C+ + C C G+R + SH CA L +KFLL++ + IR + + P + + +D+D + +++WT V D + +K +V + + SP GLA DW+ L+W+D + I V N MR L+ N + R IVV P ++WTDWG PKIE GMD R+V+I L PNGLA+DY LYW DA + I L +R+ ++ H F + ++ + +Y +DW + I + TG ++ + + M + +FH+ PV+ A N C +LCL + N F C CP LL+DGKTCSP + F
Sbjct: 699 KNRCGDNNGGCTHLCLPSGQNYTCACPTGFR------------------KISSHACAQSL------------------------DKFLLFARRMDIRRISFDTEDLSDDVIPLADVRS--AVALDWDSRDDHVYWTD-------VSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLI-WENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRRRPPVSTPCAMENGGCSHLCLRSP----NPSGFSCTCPTGINLLSDGKTCSPGMNSFL 1051 HSP 3 Score: 166.777 bits (421), Expect = 3.722e-41 Identity = 112/363 (30.85%), Postives = 167/363 (46.01%), Query Frame = 1
Query: 1222 CSHKCANYL--GSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPT-SNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTG--NMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIEN-ACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFF 2286
CSH C + C C G + D K C FL+++ + IR + L Y + P N T N + IG+D + ++W+ H +S+ + ++ + + + GLA D I ++W+D N I V N+ MRK LV N R+IV++ + ++WTDWG+ K+E GMDG DR VLI + L PNGL +D L W DA T +I +L R +VS + H + + + + ++Y +DW I + K TG ILV S P M ++ + AQP+ N C +LCLP F C CP L DGKTC P+ +
Sbjct: 1013 CSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARRIDIRMVSLDIPYFADVVVPINITMKNTIAIGVD--PQEGKVYWSD--------STLHRISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLV-WQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVSPVQ-HPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNLPGLMDMQAVDR-AQPLGFNKCGSRNGGCSHLCLPRPSG------FSCACPTGIQLKGDGKTCDPSPETYL 1356 HSP 4 Score: 156.377 bits (394), Expect = 6.505e-38 Identity = 107/365 (29.32%), Postives = 172/365 (47.12%), Query Frame = 1
Query: 1150 PGYR-IDSINETKCIDIDECAD-HMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTG-NMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPD 2229
PG + +++ + + ++C + CSH C + C C G + D K C E +LL+S++ SIR + L ++ P +N I +D+D +++T + + G NM+ T++ + + GLA DW+ L+W+D N I + RK L+ + + R+I V P+ +FWTDWG KIE +DG +RKVLI L PNGL LDY +YWVDA +I +L R+ +VSH+ +H F + + W+Y +DW + I ++ K +G+ K V + + + Q NAC N C +LC + + F C CPD
Sbjct: 1294 PGLMDMQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNV--ISLDYDSVDGKVYYTDV-----FLDVIRRADLNGSNME--TVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN-NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHV-SHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTGTNACGVNNGGCTHLCFARASD------FVCACPD 1641 HSP 5 Score: 75.0998 bits (183), Expect = 6.494e-13 Identity = 45/122 (36.89%), Postives = 64/122 (52.46%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKN---KCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPE 456
++ CR +F+C +G CI CDG +C D SDE +C E F C + + CDG+ DC ++ D + C +C++DQF+C CI + LCN NDC D SDESP+
Sbjct: 228 HQPCRSGEFMCDSGLCINAGWRCDGDADCDDQSDERNCTTSMCT-AEQFRCHSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCALDQFLCWNG--RCIGQRKLCNGVNDCGDNSDESPQ 346
BLAST of low-density lipoprotein receptor-like vs. Ensembl Celegans
Match: T13C2.6 (pep chromosome:WBcel235:II:6783427:6788255:1 gene:WBGene00020481.1 transcript:T13C2.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T13C2.6) HSP 1 Score: 294.278 bits (752), Expect = 4.162e-85 Identity = 232/737 (31.48%), Postives = 358/737 (48.58%), Query Frame = 1
Query: 160 KCIPETLHCDGHDNCGDNSDEI------CDHRETFTCSD-----SNIILKTELCDGKADCDNDEDPKICVK--NKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNR-CKTIDSCYDNDQR----------CDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNN-TCIAFQRVCDKTN-DCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMS-KDNK--------QCLAVG-EKFLLYSTKNSIRELRLL-RHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPR-------------TLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIK-DGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHG-----FDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLE 2196
KCIP CDG +C D SDE C ++ F C + S I +T +CDG+ DC N +D + C +KC + F C NCI K +C+ DCSDGSDE A N+ V QC ++C + + CI + CD + DC D SDEKNC Q T EF C A CI K + CDG DC + DE +C++ R C Y + C+G DC D DE+ C+ + V+C E++C CI ++C DCGDG+ K +CK ++ C + + C CK GY++++ +CIDI+EC VC C N GSY+C C G+ +S D K +C A+G + +L + +++IR+ L+ + + + SP + + +DF + + W+ +++ L GN+ L +IH+P GLA DW+H LLFW+D ++I+VL++ NG ++ L + + R+I V P+ IFWTDWGK+ +IE GMDGQ R V+++ D + PNGLALDY +YW DAK + I + + +++ + L++H F + VFED L+ +DW+++ +I ++K TG + ++ PM V+++H+ AQP+ ++N C N C +LCLP ++ E
Sbjct: 92 KCIPNKWVCDGEFDCEDKSDEFQCKNVSCQEKQ-FQCEELSGDYSLCIPETWVCDGQRDCTNGKDEQNCTSKTSKCPDNNFQCSNG--NCIFKNWVCDGEEDCSDGSDELLTAPSNCNR-TVNQCPPGEMWKCGSGE-CIPSRWRCDAEVDCKDHSDEKNC---------------TAIQHTCKLAEEFACKASHN--CINKAFVCDGELDCSDG-SDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCPDGGDEKECNMTAP--VTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDGNMSVCSQKKI---IEMCKPSSEGCVCRPSFVRGNNVCHCKDGYKLEN---GQCIDINECEIAGVCDQICLNIPGSYRCACHAGYQISFGDTKIGSGRIANKCRAMGGDPLVLLTNRHTIRQFDLVNKMHFPVSSSPGSA------VAMDFHILNGTLIWS------DVLSKQILKCSIGNVSNAFLGTDMCDKKHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLDQINVLDMKNGKQRVLYS-SDLEEPRAIAVDPEVGLIFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGLALDYVDKRVYWADAKIKSIFSCD---YWGKNIKTVLHSHQYLRHPFSMAVFEDRLFYTDWEHDGVITVNKFTGADIRTVMDQVKSPMTVRIYHKQAQPL-MQNKCENSECDHLCLPRAVYRE 780 HSP 2 Score: 111.309 bits (277), Expect = 1.131e-24 Identity = 98/294 (33.33%), Postives = 130/294 (44.22%), Query Frame = 1
Query: 226 CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMC--------RTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN----SIHFQCE----NKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL-----NCSNF--ECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
CD +F C D I + CDG DC N+ED K C K C ++ C + CI +C+ DC D SDE QC N FQCE + LCI + CDG+ DC++ DE+NC +++ C +N F C G+ CI K W CDG DC + DEL NC+ +C P + +C + C + RCD DC D+SDE+ C+ QH +C EF C ++ CI VCD DC DGSDE
Sbjct: 32 CDATNSFQCQDGRCIPMSWRCDGDIDCQNEEDEKNCPK-VCGAEEHKCGEVKSARSSLERFKCIPNKWVCDGEFDCEDKSDE-------------FQCKNVSCQEKQFQCEELSGDYSLCIPETWVCDGQRDCTNGKDEQNC----------------TSKTSKCPDNNFQCSNGN---CIFKNWVCDGEEDCSDG-SDELLTAPSNCNRTVNQCPPGEMWKCGS-GECIPSRWRCDAEVDCKDHSDEKNCT-AIQH--TCKLAEEFACKASHNCINKAFVCDGELDCSDGSDE 287 HSP 3 Score: 77.0258 bits (188), Expect = 5.366e-14 Identity = 64/228 (28.07%), Postives = 100/228 (43.86%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-------------CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKIC--VKNKCSI-DQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEA---CEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNC----PDSENSKSKSQ---SLADLVKQSTICQNNEFYCGAGSTVPCIAKE 729
+C F C NG CI + CDG ++C D SDE+ C E + C I CD + DC + D K C +++ C + ++F C+ NCI+K +C+ DCSDGSDE A E + + +CI +C+G+ DC D DEK C P + ++ + + ++ S +C + +F CG G+ C K+
Sbjct: 165 KCPDNNFQCSNGNCIFKNWVCDGEEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGECIPSRWRCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKAS-HNCINKAFVCDGELDCSDGSDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCPDGGDEKECNMTAPVTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDGNMSVCSQKK 391
BLAST of low-density lipoprotein receptor-like vs. Ensembl Celegans
Match: T13C2.6 (pep chromosome:WBcel235:II:6783427:6788255:1 gene:WBGene00020481.1 transcript:T13C2.6b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T13C2.6) HSP 1 Score: 294.278 bits (752), Expect = 4.176e-85 Identity = 232/737 (31.48%), Postives = 358/737 (48.58%), Query Frame = 1
Query: 160 KCIPETLHCDGHDNCGDNSDEI------CDHRETFTCSD-----SNIILKTELCDGKADCDNDEDPKICVK--NKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNR-CKTIDSCYDNDQR----------CDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNN-TCIAFQRVCDKTN-DCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMS-KDNK--------QCLAVG-EKFLLYSTKNSIRELRLL-RHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPR-------------TLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIK-DGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHG-----FDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLE 2196
KCIP CDG +C D SDE C ++ F C + S I +T +CDG+ DC N +D + C +KC + F C NCI K +C+ DCSDGSDE A N+ V QC ++C + + CI + CD + DC D SDEKNC Q T EF C A CI K + CDG DC + DE +C++ R C Y + C+G DC D DE+ C+ + V+C E++C CI ++C DCGDG+ K +CK ++ C + + C CK GY++++ +CIDI+EC VC C N GSY+C C G+ +S D K +C A+G + +L + +++IR+ L+ + + + SP + + +DF + + W+ +++ L GN+ L +IH+P GLA DW+H LLFW+D ++I+VL++ NG ++ L + + R+I V P+ IFWTDWGK+ +IE GMDGQ R V+++ D + PNGLALDY +YW DAK + I + + +++ + L++H F + VFED L+ +DW+++ +I ++K TG + ++ PM V+++H+ AQP+ ++N C N C +LCLP ++ E
Sbjct: 94 KCIPNKWVCDGEFDCEDKSDEFQCKNVSCQEKQ-FQCEELSGDYSLCIPETWVCDGQRDCTNGKDEQNCTSKTSKCPDNNFQCSNG--NCIFKNWVCDGEEDCSDGSDELLTAPSNCNR-TVNQCPPGEMWKCGSGE-CIPSRWRCDAEVDCKDHSDEKNC---------------TAIQHTCKLAEEFACKASHN--CINKAFVCDGELDCSDG-SDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCPDGGDEKECNMTAP--VTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDGNMSVCSQKKI---IEMCKPSSEGCVCRPSFVRGNNVCHCKDGYKLEN---GQCIDINECEIAGVCDQICLNIPGSYRCACHAGYQISFGDTKIGSGRIANKCRAMGGDPLVLLTNRHTIRQFDLVNKMHFPVSSSPGSA------VAMDFHILNGTLIWS------DVLSKQILKCSIGNVSNAFLGTDMCDKKHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLDQINVLDMKNGKQRVLYS-SDLEEPRAIAVDPEVGLIFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGLALDYVDKRVYWADAKIKSIFSCD---YWGKNIKTVLHSHQYLRHPFSMAVFEDRLFYTDWEHDGVITVNKFTGADIRTVMDQVKSPMTVRIYHKQAQPL-MQNKCENSECDHLCLPRAVYRE 782 HSP 2 Score: 111.694 bits (278), Expect = 1.014e-24 Identity = 97/295 (32.88%), Postives = 130/295 (44.07%), Query Frame = 1
Query: 226 CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKIC-VKNKCSIDQFMC--------RTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN----SIHFQCE----NKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL-----NCSNF--ECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
CD +F C D I + CDG DC N+ED K C + C ++ C + CI +C+ DC D SDE QC N FQCE + LCI + CDG+ DC++ DE+NC +++ C +N F C G+ CI K W CDG DC + DEL NC+ +C P + +C + C + RCD DC D+SDE+ C+ QH +C EF C ++ CI VCD DC DGSDE
Sbjct: 32 CDATNSFQCQDGRCIPMSWRCDGDIDCQNEEDEKNCPISEVCGAEEHKCGEVKSARSSLERFKCIPNKWVCDGEFDCEDKSDE-------------FQCKNVSCQEKQFQCEELSGDYSLCIPETWVCDGQRDCTNGKDEQNC----------------TSKTSKCPDNNFQCSNGN---CIFKNWVCDGEEDCSDG-SDELLTAPSNCNRTVNQCPPGEMWKCGS-GECIPSRWRCDAEVDCKDHSDEKNCT-AIQH--TCKLAEEFACKASHNCINKAFVCDGELDCSDGSDE 289 HSP 3 Score: 76.6406 bits (187), Expect = 5.752e-14 Identity = 64/228 (28.07%), Postives = 100/228 (43.86%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-------------CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKIC--VKNKCSI-DQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEA---CEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNC----PDSENSKSKSQ---SLADLVKQSTICQNNEFYCGAGSTVPCIAKE 729
+C F C NG CI + CDG ++C D SDE+ C E + C I CD + DC + D K C +++ C + ++F C+ NCI+K +C+ DCSDGSDE A E + + +CI +C+G+ DC D DEK C P + ++ + + ++ S +C + +F CG G+ C K+
Sbjct: 167 KCPDNNFQCSNGNCIFKNWVCDGEEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGECIPSRWRCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKAS-HNCINKAFVCDGELDCSDGSDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCPDGGDEKECNMTAPVTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDGNMSVCSQKK 393
BLAST of low-density lipoprotein receptor-like vs. Ensembl Celegans
Match: lrp-1 (Low-density lipoprotein receptor-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q04833]) HSP 1 Score: 289.271 bits (739), Expect = 1.166e-80 Identity = 232/748 (31.02%), Postives = 341/748 (45.59%), Query Frame = 1
Query: 127 CRRFQFLCQNGK-CIPETLHCDGHDNCGDNSDE-----------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKI--CVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKD-ELNC-SNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDE--EFCSNPSQHNVSCDPFNEFKCVKNN-TCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLA---VGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKK----TGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFF 2286
C C+N K CIP CDG ++CGD SDE +C ++ F C + I + CD DC + D K+ C C+ +QF C CI LC+ +NDC DG+DE E C VQC +++ F+C N + C+ +CDG+SDC D SDE +C + S C ++F C S+ CI W+CDG DC + + + C S +CS D+ +C C N+ CDG DC D SDE E S + C PF C + TCI ++CD C G+DE GG+ C ++LC + C KC N + C C G ++ +N+TKC +EC D CS +C + + C C EG+ + D + C V + + S +N I H +D ++ N I + +D + I+W+ +I + L + + + G+A DW+ L+W D N I V N+ + ++TL+ N S+ R I V P+ +FWTDWG+ P IE MDG DR++++K ++ PN +ALDY D +Y+ D+K I N R V+ S H + +FED +Y SD +K +Q++ K T + + K +GV H + QPV N C + C +LCL L N F C CP L GK C F
Sbjct: 1101 CAENTIKCRNTKKCIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKK-FQCDNHRCIPEQWKCDSDNDCGDGSDEKLEMCGNATCAANQFSCANG--RCIPIYWLCDGDNDCYDGTDEDKERCP------PVQC-SALQFRCANGRQCVPLRNHCDGQSDCEDGSDEDSCAVTAES----------------CTPDQFKCV--SSGLCIPASWKCDGQQDCDDGSDEPKFGCTSGRQCSSDQ-FKCGN-GRCILNNWLCDGENDCGDGSDESSERGCKTSMNARKC-PFEHVACENDQETCIPLHQLCDGKTHCPGGTDE--GGR---CARDLCSADRAGCSFKCHNSPNGPICSCPFGEQL--VNKTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCKVADNVKDTRIYVSNRNRIY---YSDHKLDNWHTFGAIVEN--AIALAWDSLTDRIYWS------DIREKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVMFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDFIDFVNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDRRLQK-LQVYPKYPNGTTSEYPSHTFSKALGVVAVHPVLQPVIKNNPCSTNPCSHLCL-----LNNKNTFTCKCPMGEKLDASGKKCIDDAKPFL 1793 HSP 2 Score: 280.411 bits (716), Expect = 8.172e-78 Identity = 240/782 (30.69%), Postives = 365/782 (46.68%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDN--SDEIC--------DHRET-FTCSDSNI-ILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--------KNCPDSENSKSKSQSLA---------------DLV------KQSTICQNNEFYCGAG----STVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFC---SNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGN-CEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMV-CSHKCANYLGSYKCECFEGFYMSKDNKQCLAV---GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDG----QDRKV-LIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILV--SSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSE 2280
C F C NG CI +T CDGH++C D SDE D R C ++NI I +LCDG DC + DE+ C+ +C+ Q R CI +T C+ +NDCSDG DE+ C + C FQC+N + CISR + CDG+ DC D SDE + C D E + + LA D+ + + +C+ + C G S CI W CDG DC + + NC+ C PD +C C N +CDG DC D SDE+ C S +Q C +F+C + CI +VCD+ DC D SDE S C + C + CEQKC++ KC C G+ ID ++ C +++EC + + CS KC + +GSYKC C +G+ +S D+ C E F L + K+ IR++ + + ++ N + + ID K K Q + V +D + S + + T++ ++ G+A DW+ L+ + I V + KTL+R + ++IVVHP +F+T+W +P I + +DG QD L + L PN +A+DY+ D L+W DA +I + RR + + +H + VF+D+LY +DW+ ++++ K TGK + ++ + P +++ H + QP N C N C +LCL + + C CPD LL+D KTC P +E
Sbjct: 2874 CAEGTFPCSNGHCINQTKVCDGHNDCHDEQVSDESLATCPGLPIDCRGVKVRCPNTNICIQPADLCDGYDDCGDKADENQLFCMNQQCA--QHYVRCPSGRCIPETWQCDGDNDCSDGWDETHTNCTDTAGKKI--CVGDYLFQCDNLK-CISRAFICDGEDDCGDGSDEHSRHGCGNRTCTDQEFHCTSNAKLAQPKYECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSNQHCIHSTWECDGDNDCLDGSDEHANCTYSSCQPDF-FQCAN-HKCVPNSWKCDGNDDCEDGSDEKDCPKNSASAQKASKCSN-GQFQCT-SGECIDDAKVCDRNFDCTDRSDE-----SSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEGFAIDISDQKSCHNVNECYEGISGCSQKCDDKIGSYKCGCVDGYQLSSDDHSCKRTEMEPEPFFLLANKHYIRKISIDGNKYELA---AQGFDNVVSLDIDLTEK-KAYLIDQGKLRLLRVDLDEMDSPLSSYE--TVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIR-DRIQQPKAIVVHPGKGYLFFTEWSLQPYIGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVVFDDYLYWADWNLREVLRCDKWTGKNETILKKTVQLPNDLRIVHPMRQPA-YPNPCGDNNGGCSHLCLIGAGG----NGYTCSCPDQFVLLSDQKTCEPNCTE 3629 HSP 3 Score: 270.011 bits (689), Expect = 2.380e-74 Identity = 207/705 (29.36%), Postives = 313/705 (44.40%), Query Frame = 1
Query: 244 FTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRT---KPMNCISKTSLCNHNNDCSDGSDES--PEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLY--SPKNP-------TSNFLPIGIDFDYKSKNIFWTQFEPNPEI---VQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA--HGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPK----PMGVKLFHQLAQP---------VNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
F C+D I CDG DC + ED K C C DQ+ C T ++CI++ C++ DC+DGSDE P + V C + F C + + C CDGK DC D SDEK+ + T C +F C CI K W CDGS DC + + C +C+ ++ +CK C RCD Y DC DNSDE+ C C P ++ C CI ++CD + DC DG+DE + C +NLC + C+ C +C C GY++D C DI+ECA+ C CAN+ + C C + + Y N+ +++L + LY +PKNP S GIDFDY + IFWT + V + +S+ + ++LVY R LA DWI L+ + I V + +G R+T++ + I + P +F+T+ + K+E MDG +R+ L+ +G+ +D +YWVD K ++ + + RR V +N H F + +F+ +LY +DW +IQ+ K K+L S+ + PMG+ +H +AQP + IEN C N C+ +C+ + N + ++C CP L+N GK C
Sbjct: 58 FRCNDGKCIRTEWKCDGSGDCSDGEDEKDCPHPGCKSDQWQCDTYTWHSVSCIAEYQRCDNITDCADGSDEKDCPAS--------TVDCSSQNVFMCADGRQCFDVSKKCDGKYDCRDLSDEKD---------------SCSRNHTACFQYQFRCA--DKTQCIQKSWVCDGSKDCADGSDEPDTCEFKKCTANE-FQCKN-KRCQPRKFRCDYYDDCGDNSDEDECGE-----YRCPP-GKWNCPGTGHCIDQLKLCDGSKDCADGADE------QQCSQNLCP--SLGCQAGCHPSPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMEHGPGKDNLTMRGYCVSNNADKMKLFVARREGLYRLNPKNPDEEVKKLASGEFIYGIDFDYGDRKIFWTDRLAHSAFSADVDDEGEISQIKKLSLKSLVYPRC-----LAVDWITNTLYIIESGSRRIDVSSY-DGERRTVLLADGLTLPLDIALDPLRGEMFFTN---QLKLEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQYLYWTDWTRLGVIQVEKFGSDTKLLWSNTENNVFPMGISAYHPMAQPGPGQSECLAMKIENPCTNADCEGMCILSKDNGGFGVGYKCACPIGQKLVN-GKRC 711 HSP 4 Score: 219.164 bits (557), Expect = 6.652e-58 Identity = 211/748 (28.21%), Postives = 335/748 (44.79%), Query Frame = 1
Query: 160 KCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSN-IILKTELCDGKADC--DNDEDPKIC--VKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELN--CSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDN--SDEEF--CSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKI--NNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGF-----YMSKDNKQCLAVGEKF-LLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTL---VYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKT----------------------LVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDY-YFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP---KPMGVKLFHQLAQPVN-IENACINHTCQYLC--LPTSMNLENYIKFRCICPD 2229
+CIP C+G D+C DNSDE CD F C+ S I + +CD + DC ++DE C CS +F C CI + +C+ CSDG DES C + P QCD+ CI+ +CD K DC + +DE +C D V + T C EF C + CI +++ CDG DC + DE + C + +C P RC C + Q C+G+ DC N SDE CS+ S++ C ++FKC N C+ CD+ +DCGD SDE G S++ K C+ NNG C+ C + C C+ G+R D + +CIDIDECA + C+ C N GSY C C E + S K C A G+ ++ +S+ +L L + + K + IGI FD + + ++W + + + + + + + + L + P +A D+ G LF + + N + L R + + G+ + +++ P RI ++D G KIEC MDG R++++KD +++P +A+D + +YWVD K R++ N+ +R VV H + +DVFE+ +Y ++ K + + K G+ ++ V + V++ + A+ + C C +LC LP++ F C+CPD
Sbjct: 3805 RCIPNWAFCNGQDDCRDNSDEDKQRCPTCDDVGEFRCATSGKCIPRRWMCDTENDCGDNSDELDASCGGTTRPCSESEFRCNDG--KCIPGSKVCDGTIQCSDGLDES--QCTLRRCLPGHRQCDDGT---------CIAEHKWCDRKKDCPNAADELHCED--------------VSRRT-CSPFEFEC---ANSVCIPRKFMCDGDNDCGDN-SDETSSECRSAQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPNDFSDEHLSMCSSFSEYG-DCSS-DQFKCA-NGKCVNGTVACDRKDDCGDASDEI--GCSKHGGKTSCEAFGNNGGCKHICTDVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMTGKDCRAKGDAANVMIGADDSLVQLSLHGSGTNRHAAAKANDDDNDIIGIAFDPRKELMYW--IDGSERTIYRSAIANGNQSHEGQKLDVDFAAMGVVPTAIAVDYTTGNLFIAAVSENIENGLVTARKKRMSEPIDNQNTGFIFVCLPDGRYLKKIVAGHLQQPTALITAPSAGRICYSDAGLHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERTTVV-HDRHIPYAVDVFENHIYWLSRES-KTLYVQDKFGRGRVSVLASDLEDGHTVRVSQKYAKDTQRTVSGCERAQCSHLCVSLPST-------GFACLCPD 4504 HSP 5 Score: 101.293 bits (251), Expect = 2.874e-21 Identity = 110/359 (30.64%), Postives = 140/359 (39.00%), Query Frame = 1
Query: 319 DPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSI----HFQCENKQLCISRIYYCDGKSDCSDQSDEKNC------------------PDSENSKSKSQSLADLVKQSTICQNNEFYCGAG----STVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERP---GGKSENCDKNLCKINNGNC---------EQKCINFYSHRKCL---CKPGYRIDSINETKCIDIDECADHMVCSHK--CANYLGSYKCE 1266
D K C N C+ QF C CI K C+ DC DGSDE E+ C I FQC N C CDG DC D SDE+NC P + T+C + E C A + CIAK WRCD DC + + C+ EC RC + C N C+G DC DNSDE+ Q +CD EF+C + CI + +CD NDCGD SDE GG + C ++ + N+G C +C + +C C PG+R +C D A+H C K C N CE
Sbjct: 3619 DQKTCEPN-CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESI----------CGQRICPVGEFQCTNHN-CTRPFQICDGNDDCGDSSDEQNCDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGW-TRCSSSYRCIPNWAFCNGQDDCRDNSDED-----KQRCPTCDDVGEFRCATSGKCIPRRWMCDTENDCGDNSDELDASCGGTTRPCSESEFRCNDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCLPGHR-------QCDDGTCIAEHKWCDRKKDCPNAADELHCE 3952 HSP 6 Score: 99.7525 bits (247), Expect = 8.004e-21 Identity = 104/423 (24.59%), Postives = 166/423 (39.24%), Query Frame = 1
Query: 1078 CKINNGNCEQKCINF-YSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYS---PKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSK--TGNMKPRTLVYSRIHSPV--GLAYDWIHGLLFW--SDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLK-TFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVS------SPKPMG-VKLFH-----QLAQPVNIENACINHTCQYLCL-------PTSMNLENYIKFR-CICPDFSYLLNDG 2253
C INNGNC+ CI ++ R C C GY D G C+ F+ E F++ +TK +++ + +D S P G+D+DY+SK I+ E I+ ++ G PR ++ I S LA DWI+ +++ D I V + RK L+ + SI V P R ++W D G++P I+ +DG R+V++ G+ P L +D +YW DAK I Y ++ T ++V A + + +Y +D EK+ + K + +L+S S K +G V +F + + P I + C LC PT +K R C PD + +DG
Sbjct: 2084 CHINNGNCDHICIPLMFAQRTCTCANGYVKD---------------------------GQTSCKLFD---------------ESFVIVATKT-----KVIGYPIDETQSKGVAMEPIGGLSITGVDYDYESKTIYVA------EASGINKGITAYTIGESSPRAVIRDSIGSLTIKSLAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETP-SSIAVDPVSRYLYWADQGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGI--YRVRSTGGTPELVRSDIASAAGVALHGQNMYWTDNRLEKLFRATSKPNQTSLLLSPTTVAASLKDIGDVAVFSSNNQPRASSPCQITDNLRKSPCTQLCFATPGTQTPTCSCARGVLKGRTCEEPDTYIMFSDG 2450 HSP 7 Score: 94.7449 bits (234), Expect = 2.571e-19 Identity = 115/395 (29.11%), Postives = 166/395 (42.03%), Query Frame = 1
Query: 127 CRRFQFLC--QNGKCIPETLHCDGHDNCGDNSDE----ICDHR----ETFTCSDSNIILKTELCDGKADCDNDEDPKICVK------------NKCSIDQF-----------------MCRTKPMNCISKTSLCNHNNDC-------------SDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSEN-SKSKSQSLADLVKQSTICQNNEFYCG----------AGSTVPCIAKEWR------------CDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGG-KSENCDKNL 1077
C QF C + KCIP+ +CDG +C D SDE IC R F C++ N ++CDG DC + D + C K +C +F +C + NC ++ CN NN C DGSDE+PE +I K +C +S CI +C+G+ DC D SDE + CP ++ + + + + + +C + E CG G+T PC E+R CDG+ C + DE C+ C P +R +C + CD DC + +DE C + S+ +C PF EF+C N+ CI + +CD NDCGD SDE +S CD L
Sbjct: 3627 CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRPFQICDGNDDCGDSSDEQNCDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNCTAEEFRCN-NNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYR--------CIPNWAFCNGQDDCRDNSDEDKQRCPTCDDVGEFRCATSGKCIPRRWMC-DTENDCGDNSDELDASCGGTTRPCSESEFRCNDGKCIPGSKVCDGTIQCSDGL-DESQCTLRRCLPG--HRQCDDGTCIAEHKWCDRKKDCPNAADELHCEDVSRR--TCSPF-EFECA-NSVCIPRKFMCDGDNDCGDNSDETSSECRSAQCDPPL 4004 HSP 8 Score: 73.1738 bits (178), Expect = 1.131e-12 Identity = 56/257 (21.79%), Postives = 110/257 (42.80%), Query Frame = 1
Query: 1429 PIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGK-------EPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLC 2172
P+G++ + S N N E ++ SK + K I + DW+ ++++ ++ ++ T G + + G+ + ++ + P +FW+D G EP+IE + G RKV++ + + P +A+D+ +YW D I V + R+ + S A DI ++ WLY+SD + + +I K++G + ++ P +++F + V N N LC
Sbjct: 2497 PVGVNISWFSMN--------NAENPRLVFGASKQPHAK-------EIRHISDMKLDWLTQKIYFTTGRGGKVMAID-TAGEHLSTIASGDWT--YALAIDPCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVIASGYRAKSLDI--WDRWLYMSDPLSNGVFRIDKESGSGLENVVSDRRIPGALRVFASESD-VRTRNQVCNALTSQLC 2732 HSP 9 Score: 66.6254 bits (161), Expect = 1.098e-10 Identity = 59/179 (32.96%), Postives = 84/179 (46.93%), Query Frame = 1
Query: 613 ENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFEC-----SPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEE--FCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQ-KCINFY 1125
EN+ S + A+ ++Q + +F C G CI KEW+CDG DC + DE++ +C + +C+ C CDG DC D SDE+ +C + + + +F+C N+ CI Q CD NDCGDGSDE K E C C N +C +CI Y
Sbjct: 1037 ENNHSCQKDPAEKIEQLCSSNSTQFQCKNGR---CIPKEWKCDGENDCLDE-SDEIDEKGDKCFHETECAENTIKCRNTKKCIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAA---KKFQC-DNHRCIPEQWKCDSDNDCGDGSDE----KLEMCGNATCAANQFSCANGRCIPIY 1203 HSP 10 Score: 64.3142 bits (155), Expect = 4.808e-10 Identity = 87/372 (23.39%), Postives = 153/372 (41.13%), Query Frame = 1
Query: 1177 ETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIREL--RLLRHYMDMLYSPKNPTSNFLPIGIDF----DYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNIT-NGMRK--TLVRLGNHSKVR---SIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSH--LNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLA-----QPV---NIENACINHTCQYLCLPT-SMNLENYIKFRCIC 2223
E C + D C + S + YKC C G + + K+C+ + +LL+S+ +R + + + P +P S IG+ F D + F+ N + + G LV + +++DWI L++ D N + V+ I G+ LVR +++R S+VVHP +F+ + + I +DGQ+ +V+ L P+ +A+D+ + L W D + IS + F ++VV N I + +++Y I ++HKK G +V +F A QP+ + E+ C C LC T S + N ++ +C C
Sbjct: 670 ENPCTNAD-CEGMCILSKDNGGFGVGYKCACPIGQKLV-NGKRCIDSID-YLLFSSNKIVRGIFPEINEKALAEAVLPISPISQRR-IGMYFEVECDVHGNSFFYADIMDN-----TIYRIRPDGEGAAPVLV-THNDGLFSMSFDWISKQLYYVDNIRNSLEVVKIGETGLVHPDELVRRQLITELRDPVSVVVHPWKGLLFYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLKTISCMD---FDGKNVVKLDIDNPIPVAITIMNEYIYYVHQRPYSIRRVHKKNGGGSKIVREFGADERSIFSLKACSHQNQPIPDDSREHPCRASQCTQLCFATPSESHPNELEAKCAC 1028 HSP 11 Score: 53.1434 bits (126), Expect = 1.269e-6 Identity = 54/176 (30.68%), Postives = 73/176 (41.48%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESP----EACEIINKPLVVQ--CDNSIHFQC---ENKQLCISRIYYC-------DGKSDCSDQSDEK 597
Y C+ F C N KC+P + CDG+D+C D SDE DC + +KCS QF C + CI +C+ N DC+D SDES + C + KPL Q D I ++C E + IS C +G S CS + D+K
Sbjct: 3137 YSSCQPDFFQCANHKCVPNSWKCDGNDDCEDGSDE-------------------------KDCPKNS-ASAQKASKCSNGQFQCTSG--ECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEGFAIDISDQKSCHNVNECYEGISGCSQKCDDK 3284 HSP 12 Score: 51.6026 bits (122), Expect = 3.736e-6 Identity = 30/85 (35.29%), Postives = 44/85 (51.76%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTC--------SDSNIILKTELCDGKADCDNDEDPKICVKNKC 348
+K+C +F C+N +C P CD +D+CGDNSDE D + C + I + +LCDG DC + D + C +N C
Sbjct: 220 FKKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSDE--DECGEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLC 302
BLAST of low-density lipoprotein receptor-like vs. Ensembl Celegans
Match: lrp-2 (Low-density lipoprotein RecePtor related [Source:UniProtKB/TrEMBL;Acc:O01768]) HSP 1 Score: 248.825 bits (634), Expect = 1.653e-67 Identity = 220/744 (29.57%), Postives = 324/744 (43.55%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE---ICDHR-------ETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNK-CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCEN-KQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSC---DPFNEFKC-VKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEK--FLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDY---KSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE-PKIECMGMDGQDRKVL-----IKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN-----AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVS--SPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDG 2253
+C +F C C+P CDG +C D +DE IC F CS + I+K++ C+G +CDN D + C ++K C D+F C T CI ++ +C+ C DG DE E C K C F+C N K C+ I+ CDG +DC D SDE + E K S S T + N+F C G C+ CDG DC T +DE C C C C CDG DC DNSDE+ C+ + P ++C N CI+ + +CD TNDC +G DE C N ++ C C C C + +D N C D C CS C+ + S+ C C + F + D C++ + FL+YS ++ IR ++ Y L N + I +DF Y S +I+WT + LV + + RT+V + + G+A DWI G ++W D + I V++ +G ++ V N RS+ + + +FWTDW + P+IE + G +R ++ I W PNG+ALD +YW DAK+ I T+ RD V H F IDV+E +Y SDW I ++ K G ++ + +P +K+ H+ Q + I+N+C C +CL N K C C + +DG
Sbjct: 968 KCVGNKFQCDGTTCLPMEFICDGKSDCYDGTDELEKICKKAPIVKCSVSQFQCSKTKCIIKSKRCNGVQECDNGADEEDCPRSKLCDPDEFRCGTGL--CIKQSQVCDGKMQCLDGLDE--EHCNEEEK-----CLQGRQFRCANGKSTCLDLIFRCDGVADCEDSSDESD----EFCKGNSSS--------TCGKMNQFMCADGK---CLRSFQLCDGFPDC-LTGEDETECPPSMCDSTTHLSCLNGQKCISKQLECDGVDDCGDNSDEKHCTEIRLDEAALRCQSPM--YQCDGPNFKCISDKHLCDGTNDCEEGDDE-----GLWCTFNCTDADDLGCSHTCRPTPVGPICSCPDDHYLDK-NGVTCSKKDPCR-FGQCSQYCSPHGSSHFCYCEDSFKLGADRSSCISDDPRKPFLIYSNRHEIRMIQ--SKYPGSLPMITNLVN---AIALDFKYHQNGSVSIYWTDLSADKIYTG---LVDQRTILYQRTIVSYGVFNAEGIAVDWISGNIYWIDSFLDTIQVVS-EDGTKRATVINQNMGNARSLAIDVEEGFMFWTDWEESNPRIERASLAGNNRAIIWKISNIAQAGW-PNGIALDTIAKRVYWADAKSDSIHTI---TYDGRDHVIVFRDPERLGHCFGIDVYEGHVYFSDWRTNTISKVDKWFGSNVSIIERVATQPFSLKIVHRSKQKMQIKNSCDGFKCNGICLNNGKN-----KATCQCTNLQSTTDDG 1659 HSP 2 Score: 231.491 bits (589), Expect = 7.222e-62 Identity = 223/816 (27.33%), Postives = 343/816 (42.03%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE---ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSL------CNHNNDCSDGSDESPEACEIINKPLVVQ----CDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSE--------NSKSKSQSLADLVKQSTICQN--NEFYC-------GAGSTVPC-----IAKEWRCDGSYDCPETYK----DELNCSNFECSPDKPNRCKT---IDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE-----------RPG-------------------------------GKSENCD--KNLCKINNGNCEQK--CINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLG-SYKCECFEGFYMSKDNKQCLA--VGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKD-GLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK-QKILVSSP--KPMGVKLFHQLAQPVN----IENACINHT-CQYLCLPTSMN--LENYIKFRCICPDFSYLLNDGKTC 2262
+ CR F C NG CIPE C+ ++C + +DE C+ E F C I C+ DC++ D C CS T +NC + + C+ NDC DGSDE E V CD F C + C+ + + CDG+ DC+D SDEKNC + S K L C + +E C G +T C I WRCDG+ DC + K DE++C+ S P+RC + +C CDG DC+D DE+ C++ + C P NE+ C + CI R+CD + DC DGSDE R G G E CD + C +C+Q C C C GY + ++ C+ C CSH C + ++C C G+ +S++ K C E +L + ++ + H L S N T+ + +D+D KS ++WT + I + ++ R + G+A DW+ ++++D + + I+V ++ + L++ + R+IV+ P +FWTDWG I M MDG + +V+++D + PN LA+D LY+ DA I+ N +RR V+ H F + VFED++Y SDW N I ++HK TG +K+L+ +PMG K+ H Q + + C C LC+P + + F C+C ++G++C
Sbjct: 2679 RVCRPGYFNCGNGLCIPEQKVCNRINDCANFADESNCTCNENE-FRCQSGACIPSKARCNHMQDCNDASDEIGCPFRNCSALNEFGMTGLINCATTSQCIHPSWKCDGTNDCYDGSDEKDCFVEFDATGGSVSAPRSCDAKTQFACLATRTCMPKHWQCDGQPDCADGSDEKNCDAKKCTSFEFSCESSKKCIPLEQKCDGRRDCPDGEDEHQCETECDSKGGNATFRCTNHRCIPMAWRCDGTDDCMDNAKSLGSDEVDCAAGRTSFHVPSRCADETCVVACELTAVLCDGIQDCSDGFDEKNCASLDRQ---CKP-NEWMC-DSGQCIDSGRLCDASVDCVDGSDEWVEICSLSEPPRRGCPSGWSCLLTNGTIGCLQEQQLCDGRRDCMSGIDEQCDNPQGNCSSTRNSCDQTWNCQRHAGFESCSCDDGYHLSPYDKKTCLRSPSCP-KANCSHFCIDRRDVGHQCFCAPGYILSENQKDCRRNDTIEAEILMVYGHRLKLFTIDGHAKATLLS--NLTNG---VALDYDVKSDLVYWTDVAHDGNKAGITSMSNQPNTY--RVINSLPTKGIDGIAVDWLGRNIYYTDRNHDAIAVCDMRGRFNRILLKGTPLNDPRAIVLDPLQALVFWTDWGASAHIGRMNMDGSNEQVILQDRTIRWPNALAVDAPAQRLYFGDAHRDYIASCNYDGSKRRMVLRGSVRHIFALAVFEDYVYWSDWHNHTIERVHKITGTNRKVLIQDKQYRPMGFKIVHPSLQSMGSLKTARHPCSQPARCDNLCIPANTPDLTTSSDNFTCMCA--QGFRSEGRSC 3478 HSP 3 Score: 178.333 bits (451), Expect = 5.997e-45 Identity = 201/732 (27.46%), Postives = 293/732 (40.03%), Query Frame = 1
Query: 127 CRRFQFLCQNG----KCIPETLHCDGHDNCGDNSDEI--------CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLA-------DLVKQSTICQNN---EFYCGAGSTVPCIAKEWR-CDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQ-------RCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKC-ANYLGSYKCECFEGFYMSK-DNKQCLAVGEKFLLYSTK-NSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGL-AYDWIHGLLFWSD-------IHFNE---ISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDG-----------QDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS-HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINH 2154
C+ F C NG KCIP+ +CDG D+C + DE C H E F C+ I K CDG DC + D K C K +C+I +C +C+ LC+ C+DGSDE EAC I K L+ + EN++ + CDG DC D SDEK CPD E + ++SL K C NN F+ + T+ KEW+ CDG +DC D L+ S C+ K RC I C D Q CDG DC D SDE NP C +++C N CI CD +DCGDGSDE G EC VC+ KC + + +C C G+ +K D +C + + ++ T N + + L + +L N N +P GIDF Y ++F T I + + S GL YD++H +++++ + F+ I V + +TL+ + + + S+ V P R IFWT P+I +DG Q K L++ ++ P + LD+ + LYW+D R I + RR V L +DV ++YL I ++HK TGK V + + ++ ++A P + I H
Sbjct: 3614 CKPDFFACFNGTAISKCIPKEFYCDGEDDCPEGQDEPDSCFGIGECTH-EQFQCTSGKCIPKRRQCDGTLDCRDGSDEKGC-KKECAI---VCDN---SCVHADDLCDGKKKCNDGSDEDEEACVI--KQLLEK---------ENRKC---GGFACDGIVDCEDGSDEKGCPDLECHLASNKSLICDGTIDCSSGKDENNCHNNGESNFFQCSMQTI----KEWQVCDGRWDC----ADGLDESPEMCASRKA-RCFRIGYCDDKKQCLDVSTALCDGIRDCFDGSDE----NPIHCKDMCK--GKYRCT-NGRCIDVSARCDGRDDCGDGSDEDTCGA-------------------------------------------------ECHHFGVCAQKCWMAFNHTARCHCAPGYARTKNDENECEPLSKSAEMFITNGNRLHLMSLENSQVSVLRPVFNIKMNLIPGGIDFGY---DVFRTTLMYTVGIGNSRVDIRSKKWSDGLIGSWGEEESTAGLITYDFMHNNVYFTESSEQNRGVLFDRQANIYVAKAKDTSTRTLI-VNSTGTINSLAVDPIKRLIFWTTSAPVPRILSANLDGKPIAQPFKTGSQPHKALVERNIFEPTSMVLDFSNERLYWIDVLKRTIETVSFDGRDRRTVRKFELGDTPVTMDVLGGYIYLITRQGS-IHRMHKFTGKTNKYVQKIREVSPRIQIRVAHPAKHTVSHITH 4253 HSP 4 Score: 100.908 bits (250), Expect = 4.007e-21 Identity = 100/322 (31.06%), Postives = 143/322 (44.41%), Query Frame = 1
Query: 121 KRCRRFQFLC-QNGKCIPETLHCDGHDNCGDNSDEICDHRET-------FTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFN---EFKCVKNNTCIAFQRVCDKTNDCGD-----GSDE 1038
K+C +F C + +CI CD +++C DE + T F C + I + ++C+ DC N D C C+ ++F C++ CI + CNH DC+D SDE C N + + + C CI + CDG +DC D SDEK+C ++ S S T +F C A T C+ K W+CDG DC + DE NC +C+ + + C++ C +Q+CDG DC D DE C CD F+C N+ CI CD T+DC D GSDE
Sbjct: 2637 KKCAENEFKCLHSDRCIRYEDTCDRYNDCPMFDDEDTKYCSTRVCRPGYFNCGNGLCIPEQKVCNRINDCANFADESNCT---CNENEFRCQSGA--CIPSKARCNHMQDCNDASDEI--GCPFRNCSALNEFGMTGLINCATTSQCIHPSWKCDGTNDCYDGSDEKDCFVEFDATGGSVSAPRSCDAKT-----QFACLATRT--CMPKHWQCDGQPDCADG-SDEKNCDAKKCTSFEFS-CESSKKCIPLEQKCDGRRDCPDGEDEHQC------ETECDSKGGNATFRCT-NHRCIPMAWRCDGTDDCMDNAKSLGSDE 2935 HSP 5 Score: 100.523 bits (249), Expect = 4.909e-21 Identity = 83/261 (31.80%), Postives = 113/261 (43.30%), Query Frame = 1
Query: 286 CDGKADCDNDEDPK-----ICVKNKCSIDQFMCRTKPMN----CISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVP-CIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
CDG+ DC + ED +C C QF+C N C+ + LC+ DCS G DE P CE +C + F+C +K+ CI CD + DC D SDE NC + T C+ + F C G+ + CI KE+ CDG DCPE + +C + +C T C ++CDG DC D SDE+ C E V +N+C+ +CD C DGSDE
Sbjct: 3502 CDGQDDCGDGEDEGYFVEGVCPPFPCIAGQFVCGRTAQNATAQCLYASKLCDGVKDCSGGDDEEPAFCENF------ECTEA-QFKCGDKKKCIPLTSVCDKEKDCDDGSDELNC------------------EITSCKPDFFACFNGTAISKCIPKEFYCDGEDDCPEGQDEPDSCFGIGECTHEQFQC-TSGKCIPKRRQCDGTLDCRDGSDEKGCK------------KECAIVCDNSCVHADDLCDGKKKCNDGSDE 3724 HSP 6 Score: 88.1965 bits (217), Expect = 3.168e-17 Identity = 79/248 (31.85%), Postives = 112/248 (45.16%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGD-------NSDEICDHRETFTCSDS-----NIILKTELCDGKADCDN--DEDPKICVKNKCS----IDQFMCRTKPMNCISKTSLCNHNNDCSDGSDES--PEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECS 804
K C +F C G CI ++ CDG C D N +E C F C++ ++I + CDG ADC++ DE + C N S ++QFMC C+ LC+ DC G DE+ P + CD++ H C N Q CIS+ CDG DC D SDEK+C + L + + CQ+ + C G CI+ + CDG+ DC E + L C+ F C+
Sbjct: 1051 KLCDPDEFRCGTGLCIKQSQVCDGKMQCLDGLDEEHCNEEEKCLQGRQFRCANGKSTCLDLIFR---CDGVADCEDSSDESDEFCKGNSSSTCGKMNQFMCADG--KCLRSFQLCDGFPDCLTGEDETECPPS----------MCDSTTHLSCLNGQKCISKQLECDGVDDCGDNSDEKHCTEIR-----------LDEAALRCQSPMYQCD-GPNFKCISDKHLCDGTNDCEEGDDEGLWCT-FNCT 1270 HSP 7 Score: 84.3445 bits (207), Expect = 4.102e-16 Identity = 81/367 (22.07%), Postives = 153/367 (41.69%), Query Frame = 1
Query: 1219 VCSHKCANYLG-SYKCECFEGFYMSKDNKQCLAVG-----EKFLLYSTKNS-IRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE--------PKIECMGMDGQDRKVLI-KDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKI--IQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIK-FRCICPDFSYLLNDGK 2256
+C C ++ + C C +G+ ++N +C A E F+L + S I+ L ++Y + + + P + FD K + + + +VQ K G+ + I + G+AYD+ L+ +D I+V ++N + +V GN S R+I +H +FW W ++ IE +DG +RK L+ K+ +W NGL LD D LYW DA I R VV + +H + + F++ ++ +++ + + + Q++ S + +F + ++ C++ C +S + +C C D +L +GK
Sbjct: 555 MCDDMCIGHINQTSSCFCRDGYI--QNNTKCSASKDLKDEELFVLAQLRPSRIKILGFDKNYRTEIIGVSDLLNVKRPSAMTFDPKGEQLLMYDLRRHSLVVQ------KIGSTNYTVHGLTGIMNCEGMAYDFTSDNLYMTDQRRKIITVQRLSNLSIQKVVVSGNMSNPRAIAIHIAKSYLFWGSWNEDNNDDEKIPAMIERSKLDGSERKTLVSKNAMWI-NGLTLDLKNDYLYWCDAYRNVIERIRWNGADREVVVHGADKISHPYGLAFFDNHIFYTEFKKGAVKRVNVDFPDDVQEVFQYSATVFELLVFKNSNPETTSPCSTSSNICEHFCFASSCKGSVGCEPVKCGCADGMKVLKNGK 912 HSP 8 Score: 67.781 bits (164), Expect = 4.381e-11 Identity = 113/484 (23.35%), Postives = 179/484 (36.98%), Query Frame = 1
Query: 715 CIAKEWRCDGSYDC------PETYK-----DELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINN----GNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHM-----VCSHKCA-NYLGSYKCECFEGFYMSKDNKQCLA-----VGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIG-IDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQ---DRKVLIKDGLW-----------------TPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFD-IDVFEDWLYLSDWDN 2022
C ++W CDG DC P T K +E C +C P R DS YD + +G D +D + E C+ P + CD +NE+ C K+ C+ + CD DC DGSDE ++C + + +CE KC C ++ + KC ++ C VCS C N G++ C CF+ + C+A + +L K + + + Y M P + L I DF + I P+ I +P T Y+ + IH ++ + +I N I T+ + N ++ S R + D G ++ G++GQ +++ G+W T LA+D + + LY+VD R I + R +VS A ID E L+L+ DN
Sbjct: 54 CYPEQWYCDGFPDCQDSSDEPSTCKRTCLENEFVCKTGKCLP----RGYLCDSQYDCGRLPNGDRDLSDEA-PELCNQP----LHCD-YNEYACSKSAQCVPLFKFCDGKRDCSDGSDEH----------SMCHVEDPKTADSCEYGAAMTIDGIKCYCPKNKFLN--EQGKCEFVNHCERTKNGLPPVCSQDCTDNKNGTFTCSCFDPRLTVVNGTHCVADKDQTIPSVAILTKKKLFVLQKNKMSSYSSMPRPLGKPGAMTLVIQHPDFPEATVPILCLSESPSANDSYI--TCGNVEGSEPATKTYA-----IDFDLSSIH-IIRFDNIGNNWI----FTDASYYVFICKHNSVRISSC------RTVTAGDMGTIQDMKYDGLNGQLLVSEVDVLQQGIWRIDVASGQRYRLSYQPITSPALAIDPFTETLYFVDIGARSIKAVDYNANYSRTIVSGRIAKEVKMIDYAEGRLFLTLKDN 497 HSP 9 Score: 64.3142 bits (155), Expect = 5.995e-10 Identity = 65/197 (32.99%), Postives = 83/197 (42.13%), Query Frame = 1
Query: 571 DCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCP----ETYKDELNCSNFECSPDKPNRCKTIDS----CYDNDQRCDGYPDCTDNSDEE--FCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKIN-----NGNCEQKCI 1116
D + SD C ++ +S+ +S + C+ N+F C T CI+ WRCDG DC E Y E C F C + +T + C + CDG DC+ DEE FC N C +FKC CI VCDK DC DGSDE NC+ CK + NG KCI
Sbjct: 3455 DLTTSSDNFTCMCAQGFRSEGRSCV------SECKPNDFVCT--KTYKCISSWWRCDGQDDCGDGEDEGYFVEGVCPPFPCIAGQFVCGRTAQNATAQCLYASKLCDGVKDCSGGDDEEPAFC-----ENFECTE-AQFKCGDKKKCIPLTSVCDKEKDCDDGSDEL------NCEITSCKPDFFACFNGTAISKCI 3631 HSP 10 Score: 63.1586 bits (152), Expect = 1.064e-9 Identity = 45/187 (24.06%), Postives = 89/187 (47.59%), Query Frame = 1
Query: 1585 LAYDWIHGLLFWSDIHFNEISVLNITNG-------MRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWG-KEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA---HGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLF 2106
+AYD +H L++ + I +N+ + K ++ L + R I +HP +F+T+ IE + G R ++++ L GL +D + LY+ D+K KIS + R VVS+ + H F++ +++D + +DW ++ ++K TG + I ++ P+G+ +
Sbjct: 2396 MAYDEVHTELYFVRANPASIWRINVADNNLESYPTEPKIVLTLTVRDRPRHIAIHPCRMLLFFTNNAITGSVIERVYFSGFKRDQIVQEDLHDLRGLTIDLDSEKLYFSDSKDFKISRCDFDGSHRELVVSNTDIPSIHPFELSIYDDEIIFTDWVRRSVVGVNKITGSDNRNINRATDVPVGLVVV 2582 HSP 11 Score: 60.077 bits (144), Expect = 1.038e-8 Identity = 43/121 (35.54%), Postives = 60/121 (49.59%), Query Frame = 1
Query: 286 CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCS-------DGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKS 627
CDG DC + D K C ++F+C+T C+ + LC+ DC D SDE+PE C N+PL CD + + C C+ +CDGK DCSD SDE + E+ K+
Sbjct: 61 CDGFPDCQDSSDEPSTCKRTCLENEFVCKTG--KCLPRGYLCDSQYDCGRLPNGDRDLSDEAPELC---NQPL--HCDYN-EYACSKSAQCVPLFKFCDGKRDCSDGSDEHSMCHVEDPKT 173 HSP 12 Score: 54.299 bits (129), Expect = 6.527e-7 Identity = 84/296 (28.38%), Postives = 116/296 (39.19%), Query Frame = 1
Query: 493 CDNSIHFQCENKQLCISRIYYCDGKSD------------CSD--------QSDEKNCPDSE---NSKS----KSQSLADLVKQSTI--CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFE-CSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKN-NTCIAFQRVCDKTNDCGDGSDER----PGGKSENCDK-NLCKINNGNCEQK---------CINFYSHRKC---LCKPGYRIDSINETKCID-------IDECADH 1215
CDN I F C N + C+ + CDG D C D Q D C E + KS + L + K++ I C ++F C S CI K RC+G +C + DE +C + C PD+ RC T C Q CDG C D DEE C+ + C +F+C +TC+ CD DC D SDE G S C K N +G C + C+ +C +C + +N KCI +D+C D+
Sbjct: 925 CDNEIEFTCLNSKKCVPKSNLCDGDDDCGDGSDEDANGICKDYKCVGNKFQCDGTTCLPMEFICDGKSDCYDGTDELEKICKKAPIVKCSVSQFQC---SKTKCIIKSKRCNGVQEC-DNGADEEDCPRSKLCDPDE-FRCGT-GLCIKQSQVCDGKMQCLDGLDEEHCNEEEK----CLQGRQFRCANGKSTCLDLIFRCDGVADCEDSSDESDEFCKGNSSSTCGKMNQFMCADGKCLRSFQLCDGFPDCLTGEDETECPPSMCDSTTHLSCLNGQKCISKQLECDGVDDCGDN 1210 HSP 13 Score: 53.9138 bits (128), Expect = 6.983e-7 Identity = 37/111 (33.33%), Postives = 54/111 (48.65%), Query Frame = 1
Query: 160 KCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCD---------NDEDPKICVKN-KCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE 447
KC PE +CDG +C D+SDE + T F C + + LCD + DC +DE P++C + C +++ C +K C+ C+ DCSDGSDE
Sbjct: 53 KCYPEQWYCDGFPDCQDSSDEPSTCKRTCLENEFVCKTGKCLPRGYLCDSQYDCGRLPNGDRDLSDEAPELCNQPLHCDYNEYAC-SKSAQCVPLFKFCDGKRDCSDGSDE 162 HSP 14 Score: 50.447 bits (119), Expect = 9.062e-6 Identity = 79/294 (26.87%), Postives = 105/294 (35.71%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTE------LCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN---SIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPD---SENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCK---------TIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSC 939
K C++ + + C+ CDG C D SDE + C ++ K CDG DC++ D K C +C + +K+ +C+ DCS G DE+ C N S FQC + I CDG+ DC+D DE P+ S ++ D KQ C ST CDG DC F+ S + P CK T C D RCDG DC D SDE+ C H C
Sbjct: 3691 KGCKKECAIVCDNSCVHADDLCDGKKKCNDGSDE-----DEEACVIKQLLEKENRKCGGFACDGIVDCEDGSDEKGCPDLECHLAS-----------NKSLICDGTIDCSSGKDEN-------------NCHNNGESNFFQCSMQT--IKEWQVCDGRWDCADGLDES--PEMCASRKARCFRIGYCDDKKQ----------CLDVSTA-------LCDGIRDC------------FDGSDENPIHCKDMCKGKYRCTNGRCIDVSARCDGRDDCGDGSDEDTCGAECHHFGVC 3922
BLAST of low-density lipoprotein receptor-like vs. Ensembl Celegans
Match: rme-2 (Receptor Mediated Endocytosis [Source:UniProtKB/TrEMBL;Acc:O44191]) HSP 1 Score: 198.749 bits (504), Expect = 3.656e-52 Identity = 182/692 (26.30%), Postives = 294/692 (42.49%), Query Frame = 1
Query: 358 QFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCP--------DSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCS-----NFECSPDKPNRCKTIDSCY--DNDQRC-DGYPDCTDN------------------------------SDEEFCSNPSQHNVSCDPFNEFKCVKNNT----CIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADH-MVCSHKCANYLGSYKCECFEGFYMSKDNKQC----LAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPI-GIDFDYKSKNIFWT----QFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNI--TNGM--RKTLVRLGNHSKVRSIVVHPKYRRIFWTD-WGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKI-IQ--IHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPD 2229
+F C + CI C++ DC +G DES C + C S C+N LC++ + CDG+ DC D SDE++C D N + + + C C +G CI + CDG DC DE+NC+ N + S D + +D + + D +C GY C S+EE+ S + H SC + C + CI C+ +C G DE S++C + K C+ C+N +C+C+ GY++ T C D DECA H +C H C + LGS+ C+C G+ + D C E +L S +R++ L YSP + I IDF +++ +F + +P E+ VS G M+ ++ + +A DWI G +F++ + + ++I +GM R+ + R +VVHP I W D + K +I MDG ++L+ + L P+ LA+DY D+Y+ D + + I N+ T +RR V+S+ H +D+ F +LY +DW +E + +Q H + Q I + P G+ + H L Q N C+ C +LC+ + + + +C+CPD
Sbjct: 37 EFDCGNGRLRCIPAEWQCDNVADCDNGRDES--GCSYAH-----HCSTSFML-CKNG-LCVANEFKCDGEDDCRDGSDEQHCEYNILKSRFDGSNPSAPTTFVG---HNGPECHPPRLRCRSGQ---CIQPDLVCDGHTDC-SGGDDEVNCTRRGHENMQSSTDFHDDVHLVDPTFFANEDNKCRSGYTMCHSGDVCIPDSFLCDGDLDCDDASDEKNCQTNAPSEEEYLSGQADHMHSCSAAGMYSCGTKGSEIGVCIPMNATCNGIKECPLGDDE-----SKHCSECARK----RCDHTCMNTPHGARCICQEGYKLADDGLT-CEDEDECATHGHLCQHFCEDRLGSFACKCANGYELETDGHSCKYETTTTPEGYLFISLGGEVRQMPLADFTDGSNYSPIQKFAGHGTIRSIDFMHRNNKMFMSISDEHGDPTGELS-----VSDNGLMR---VLRENVIGVSNVAVDWIGGNVFFTQKSPSPSAGISICTMSGMFCRRVIEGKEQGQSYRGLVVHPMRGLIIWIDSYQKYHRIMMANMDGSQVRILLDNKLEVPSALAIDYIRHDVYFGDVERQLIERVNIDTKERRVVISNGVHHPYDMAYFNGFLYWADWGSESLKVQEMTHHHSSPQVIHTFNRYPYGIAVNHSLYQTGPPSNPCLELECPWLCVIVPKS-DFIMTAKCVCPD 693 HSP 2 Score: 60.8474 bits (146), Expect = 4.733e-9 Identity = 56/155 (36.13%), Postives = 68/155 (43.87%), Query Frame = 1
Query: 628 KSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFC-----------SNPSQ------HN-VSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
K+ + A V ST Q EF CG G + CI EW+CD DC + +DE CS CK C N+ +CDG DC D SDE+ C SNPS HN C P +C ++ CI VCD DC G DE
Sbjct: 19 KNTAQAPAVNNSTCDQAKEFDCGNGR-LRCIPAEWQCDNVADC-DNGRDESGCSYAHHCSTSFMLCKN-GLCVANEFKCDGEDDCRDGSDEQHCEYNILKSRFDGSNPSAPTTFVGHNGPECHP-PRLRC-RSGQCIQPDLVCDGHTDCSGGDDE 168 HSP 3 Score: 55.0694 bits (131), Expect = 2.555e-7 Identity = 73/256 (28.52%), Postives = 104/256 (40.62%), Query Frame = 1
Query: 115 YYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKN---KCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDES----------------PEACEIINKPLVVQCDN---SIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFY-CGA-GSTVP-CIAKEWRCDGSYDCPETYKDELNCSNFECS 804
Y C LC+NG C+ CDG D+C D SDE C++ ILK+ D N P V + +C + CR+ CI +C+ + DCS G DE + +++ DN S + C + +CI + CDG DC D SDEKNC N+ S+ + L+ C Y CG GS + CI C+G +CP + +CS EC+
Sbjct: 71 YAHHCSTSFMLCKNGLCVANEFKCDGEDDCRDGSDEQHCEYN----------ILKSRF-----DGSNPSAPTTFVGHNGPECHPPRLRCRSG--QCIQPDLVCDGHTDCSGGDDEVNCTRRGHENMQSSTDFHDDVHLVDPTFFANEDNKCRSGYTMCHSGDVCIPDSFLCDGDLDCDDASDEKNC--QTNAPSEEEYLSGQADHMHSCSAAGMYSCGTKGSEIGVCIPMNATCNGIKECPLGDDESKHCS--ECA 305
BLAST of low-density lipoprotein receptor-like vs. Ensembl Fly
Match: LpR1 (gene:FBgn0066101 transcript:FBtr0301471) HSP 1 Score: 333.569 bits (854), Expect = 1.217e-98 Identity = 246/768 (32.03%), Postives = 350/768 (45.57%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDH---------RETFTCSDSNIILKTELCDGKADC--DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESP--EACEI----------INKPL------------------VVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDE-LNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNV---SCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMS-KDNKQCLAV-GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS----PKPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
+C QF C +G CIP CDG +C D+SDE + F C + N I CD ++DC +DE ++C CS D++ C++ C+ +C+ + DCSDGSDE + C I K VV CD+ C N CI++ + CDG DCSD SDE++C A++ K +T C ++E+ C + C+ W CDG DCP+ + NC N C D+ +C SC C+G DC D SDE C + C+ +EF C C+ +VCDK DC DG DE P GK C N C NG C +CI+ C C GY++ S ++ C DI+EC CS C N +G +KCEC G+ K++ +C A G LL + ++ IR++ L M + + S +DF +++ IFW+ I GN K L S + S GLA DWI+ ++++D H I + N M K LV+ + RSI + P ++W+DWG P+IE GMDG R +I + PNG+ LD +YWVD K IS N QR V+ H F I FED +Y +DWD + + + +K TG+ V++ PM V ++H QP + N C +N C +LCLP E + C CP L+ DG C
Sbjct: 135 KCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGA-CIAKRWVCDGDPDCSDGSDERSC-------------ANVTKTTTPCLSHEYQCK--DRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQ-FQCGD-RSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDC-GGGQCVPLSKVCDKRKDCPDGEDE-PAGK---CGINECASKNGGCMHQCIDLKVGHHCECHEGYKL-SPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVN-----STKAATALDFVFRTGMIFWSDVTTQ----SIYKAPIDEGNEKTVVLTKSSVTSD-GLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVK-DSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGV-NHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMC 866
BLAST of low-density lipoprotein receptor-like vs. Ensembl Fly
Match: LpR1 (gene:FBgn0066101 transcript:FBtr0301470) HSP 1 Score: 335.109 bits (858), Expect = 1.660e-98 Identity = 246/763 (32.24%), Postives = 345/763 (45.22%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-------CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESP--EACEI----------INKPL------------------VVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDE-LNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNV---SCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYM-SKDNKQCLAV-GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS----PKPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C QF C NG CIP CD +C D SDE C + E + I ++ LCDG DC + D C CS D++ C++ C+ +C+ + DCSDGSDE + C I K VV CD+ C N CI++ + CDG DCSD SDE++C A++ K +T C ++E+ C + C+ W CDG DCP+ + NC N C D+ +C SC C+G DC D SDE C + C+ +EF C C+ +VCDK DC DG DE P GK C N C NG C +CI+ C C GY++ S ++ C DI+EC CS C N +G +KCEC G+ K++ +C A G LL + ++ IR++ L M + + S +DF +++ IFW+ I GN K L S + S GLA DWI+ ++++D H I + N M K LV+ + RSI + P ++W+DWG P+IE GMDG R +I + PNG+ LD +YWVD K IS N QR V+ H F I FED +Y +DWD + + + +K TG+ V++ PM V ++H QP + N C +N C +LCLP E + C CP L+ DG C
Sbjct: 179 CSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGA-CIAKRWVCDGDPDCSDGSDERSC-------------ANVTKTTTPCLSHEYQCK--DRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQ-FQCGD-RSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDC-GGGQCVPLSKVCDKRKDCPDGEDE-PAGK---CGINECASKNGGCMHQCIDLKVGHHCECHEGYKL-SPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVN-----STKAATALDFVFRTGMIFWSDVTTQ----SIYKAPIDEGNEKTVVLTKSSVTSD-GLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVK-DSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGV-NHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMC 905 HSP 2 Score: 90.8929 bits (224), Expect = 3.785e-18 Identity = 70/215 (32.56%), Postives = 98/215 (45.58%), Query Frame = 1
Query: 469 INKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKN-NTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQK 1110
I + L +CD FQC + CI + CDG +DC D SDE+ + + C +++F CG G+ CI +WRCD DC + DE N P+ +C+T+D C CDG DC D SDE C +C P +E+ C C+ +CD++ DC DGSDE ++ D+ C NG C QK
Sbjct: 128 IGQSLEAKCDEK-QFQCHSGD-CIPIRFVCDGDADCKDHSDEQ--------------IKECKFIEATCSSDQFRCGNGN---CIPNKWRCDQESDCADG-SDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHC-----RARTCSP-DEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTC--GNGRCIQK 314
BLAST of low-density lipoprotein receptor-like vs. Ensembl Fly
Match: LpR1 (gene:FBgn0066101 transcript:FBtr0301467) HSP 1 Score: 333.569 bits (854), Expect = 3.150e-98 Identity = 246/768 (32.03%), Postives = 350/768 (45.57%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDH---------RETFTCSDSNIILKTELCDGKADC--DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESP--EACEI----------INKPL------------------VVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDE-LNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNV---SCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYM-SKDNKQCLAV-GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS----PKPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
+C QF C +G CIP CDG +C D+SDE + F C + N I CD ++DC +DE ++C CS D++ C++ C+ +C+ + DCSDGSDE + C I K VV CD+ C N CI++ + CDG DCSD SDE++C A++ K +T C ++E+ C + C+ W CDG DCP+ + NC N C D+ +C SC C+G DC D SDE C + C+ +EF C C+ +VCDK DC DG DE P GK C N C NG C +CI+ C C GY++ S ++ C DI+EC CS C N +G +KCEC G+ K++ +C A G LL + ++ IR++ L M + + S +DF +++ IFW+ I GN K L S + S GLA DWI+ ++++D H I + N M K LV+ + RSI + P ++W+DWG P+IE GMDG R +I + PNG+ LD +YWVD K IS N QR V+ H F I FED +Y +DWD + + + +K TG+ V++ PM V ++H QP + N C +N C +LCLP E + C CP L+ DG C
Sbjct: 135 KCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGA-CIAKRWVCDGDPDCSDGSDERSC-------------ANVTKTTTPCLSHEYQCK--DRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQ-FQCGD-RSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDC-GGGQCVPLSKVCDKRKDCPDGEDE-PAGK---CGINECASKNGGCMHQCIDLKVGHHCECHEGYKL-SPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVN-----STKAATALDFVFRTGMIFWSDVTTQ----SIYKAPIDEGNEKTVVLTKSSVTSD-GLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVK-DSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGV-NHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMC 866
BLAST of low-density lipoprotein receptor-like vs. Ensembl Fly
Match: LpR2 (gene:FBgn0051092 transcript:FBtr0113384) HSP 1 Score: 332.798 bits (852), Expect = 4.703e-98 Identity = 266/877 (30.33%), Postives = 387/877 (44.13%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDH---------RETFTCSDSNIILKTELCDGKADC--DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN--------------------------------SIHFQCENKQLCISRIYYCDGKSDCSDQSDE-KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETY-KDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFY-MSKDNKQCLAV-GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP----KPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC-SPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLI 2589
C QF C G+CIP CDG +C D+SDE + +E F C + I + +CD + DC +DE C + CS ++F C++ CI + +C+ N DC DGSDE+ C + C N S F C++ CI + CDG SDC + DE +NC V CQ EF C + C+ K W CDG DCP+ + + NC C PD+ +C SC C+G DC D SDE C + S +C+ EF C CI +VC++ DC +G DE P GK C N C NG C +C+N +C C GY++ + T C+DIDEC +CS C N +G++KCEC G+ + K++ +C A G LL + ++ IR++ L R M + + S +DF +++ IFW+ I GN + L S + S GLA DWI+ ++++D H I + N M K LV+ + RSI + P ++W+DWG P+IE GMDG R +I + PNG+ LD LYWVD K IS N QR V+ H F I FED++Y +DWD + + + +K G V++ PM V ++H QP + N C +N C +LCLP E + C CP L+ DG C +++ S+ K N Y+ + L + L + ++ + +YR R V + NF NP Y++ + ++ N P IY D N L
Sbjct: 193 CDEKQFQCSTGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPRRWVCDRENDCADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEA--QCNRTCRSDEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGP-CIPNQWVCDGDSDCRNGEDEMQNC---------------TVSLLNFCQAGEFQC--SDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQ-FQCND-QSCIAGHLTCNGKRDCADGSDEIMC-DISATPRTCNATTEFDC-GGGLCIPNAKVCNRRKDCPNGEDE-PAGK---CGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHT-CVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLARRHDIRKIALDRPEMTSIVN-----STKAATALDFVFRTGMIFWSDVATQ----SIYKAPIDEGNDRTVVLTKSSVTSD-GLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVK-DSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSGEYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQPDGV-NHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMCVEDLETKTGNNRTDTSNQVHKSDAESENDYVEIALHVIASLAGTALVASVIYVVYRRCTRAV--NSMNFENPVYHKTTEDHFSLEK-NGTP---HIYAAANDEEAVNPLF 1022
BLAST of low-density lipoprotein receptor-like vs. Ensembl Fly
Match: LpR2 (gene:FBgn0051092 transcript:FBtr0113386) HSP 1 Score: 330.872 bits (847), Expect = 4.356e-97 Identity = 244/767 (31.81%), Postives = 347/767 (45.24%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDH---------RETFTCSDSNIILKTELCDGKADC--DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN--------------------------------SIHFQCENKQLCISRIYYCDGKSDCSDQSDE-KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETY-KDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFY-MSKDNKQCLAV-GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP----KPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C QF C G+CIP CDG +C D+SDE + +E F C + I + +CD + DC +DE C + CS ++F C++ CI + +C+ N DC DGSDE+ C + C N S F C++ CI + CDG SDC + DE +NC V CQ EF C + C+ K W CDG DCP+ + + NC C PD+ +C SC C+G DC D SDE C + S +C+ EF C CI +VC++ DC +G DE P GK C N C NG C +C+N +C C GY++ + T C+DIDEC +CS C N +G++KCEC G+ + K++ +C A G LL + ++ IR++ L R M + + S +DF +++ IFW+ I GN + L S + S GLA DWI+ ++++D H I + N M K LV+ + RSI + P ++W+DWG P+IE GMDG R +I + PNG+ LD LYWVD K IS N QR V+ H F I FED++Y +DWD + + + +K G V++ PM V ++H QP + N C +N C +LCLP E + C CP L+ DG C
Sbjct: 193 CDEKQFQCSTGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPRRWVCDRENDCADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEA--QCNRTCRSDEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGP-CIPNQWVCDGDSDCRNGEDEMQNC---------------TVSLLNFCQAGEFQC--SDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQ-FQCND-QSCIAGHLTCNGKRDCADGSDEIMC-DISATPRTCNATTEFDC-GGGLCIPNAKVCNRRKDCPNGEDE-PAGK---CGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHT-CVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLARRHDIRKIALDRPEMTSIVN-----STKAATALDFVFRTGMIFWSDVATQ----SIYKAPIDEGNDRTVVLTKSSVTSD-GLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVK-DSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSGEYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQPDGV-NHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMC 918
BLAST of low-density lipoprotein receptor-like vs. Ensembl Zebrafish
Match: ldlra (low density lipoprotein receptor a [Source:ZFIN;Acc:ZDB-GENE-031217-1]) HSP 1 Score: 379.793 bits (974), Expect = 1.196e-116 Identity = 251/736 (34.10%), Postives = 373/736 (50.68%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINH-TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPT 2271
C Q+ C NGKCI CD D+CGD +DE+ TC S I K+ CDGKADC+N+ D + C +C +F C + C++ +C+ DC DGSDE P C S F+C N Q C+ R++ CDG +DC+D SDE + C + +K+ C + EF+CG+G CI W+CDG DC + + DE NCS C PD+ +C SC ++C+ DC D SDE C N + C+P FKC ++ CI+ ++VC+K DC D SDE CD N C NNG C C + +CLC G+R+ +++ +C DIDECA+ CS C N +GSYKCEC +G+ M +K C A+G +L ++ ++ +R++ L R Y+ ++ KN + +D + S++I+W+ + + + + + + + +V S + +P G+A DWIHG ++W+D ISV RKTL + N +K R+IVV P +FWTDWG KIE G++G DR L+ D + PNG+ LD + LYWVD+K +S +++ RR ++ AH + VFE+ ++ +D N I+ ++ TG K+ P + LFH L QP I IN+ C++LCL K+ C CPD L D + C P
Sbjct: 24 CDSRQYQCGNGKCITARWVCDETDDCGDGTDELPAACLAKTCRPSQFSCGGRLNQCIPKSWKCDGKADCENNADEEGCDPRQCHDGEFRCGSG--QCVTAAFVCDDEIDCEDGSDEVSCPPTTC------------GSSSFRCNNAQ-CVPRLWVCDGDADCADNSDELPEKCGPGTSKPTKNP-----------CTSMEFHCGSGE---CIHGSWKCDGGADCLD-HSDEQNCSLPTCRPDE-FQCGD-GSCIHGSRQCNHVYDCKDMSDELGCVNATH----CEPPYRFKC-RSGECISMEKVCNKQRDCRDWSDE----PLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFRL--VDKRRCEDIDECANPDTCSQICVNQMGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYIRVIPRLKNV------VALDMNIASRDIYWSDL--SLKKIYRAPMDTADNSSQHSIVVGSDLDAPEGIAVDWIHGNIYWTDSIRGAISVATADGSRRKTLFK-ENLAKPRAIVVDPIKNFMFWTDWGTPAKIEKSGLNGVDRSTLVADDIVWPNGITLDLLTERLYWVDSKLHTLSSISVQGDGRRTLIIDQGKLAHPLSLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAEHLSSPEDIVLFHNLKQPTGINWCRINNGGCEFLCLAAPQINRFSPKYTCACPDNMMLARDMRKCVPA 707
BLAST of low-density lipoprotein receptor-like vs. Ensembl Zebrafish
Match: ldlrb (low density lipoprotein receptor b [Source:ZFIN;Acc:ZDB-GENE-040426-1254]) HSP 1 Score: 362.844 bits (930), Expect = 3.713e-111 Identity = 228/690 (33.04%), Postives = 345/690 (50.00%), Query Frame = 1
Query: 244 FTCSD--SNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG--EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ--KILVSSPKPMGVKLFHQLAQPVN----IENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSP 2268
F+C D + + CDGK+DC+N D + C + CS ++F C + C+S + +C+ ++DCSDGSDE+ AC P FQC + +C+ +++ CDG DC+D SDE ++C + ++ +C + C +G VP WRCDG++DC + DE NC+ C PD+ C C ++CDG+PDC D SDE C+ S CD + FKC + CI+ +RVCD DCGD SDE +C+ N C +NG C C++ +C C G+R+ N T C D+DEC D CS C N GSYKC C EG+ + + C A E FLL+ST++ +R+L L R Y +L +N + +D D + ++W+ + + + + + RT++ S I P GLA DW+H ++W+D +SV RKTL+ R+IV+ P+ +FW+DWG +IE G++G DR L+ D + PNG+ALD LYWVD+K +S + R ++ H + VFE+ ++ +D N I ++ TG + +L P + L+H L QP E+A +N C++LCLP + K+ C CPD L D +TC P
Sbjct: 10 FSCGDRLNQCVSSRWRCDGKSDCENGADEQNCAQKNCSAEEFRCGSG--QCVSLSFVCDGDSDCSDGSDEA--AC-----PTHTHTCGPTAFQCSSPAVCVPQLWACDGDPDCADGSDEWLQHCGGA---------------RARVCPEQQMQCRSGECVP---DSWRCDGAFDCSD-RSDEDNCTVHTCRPDE-FLCAD-GGCVPGLRQCDGHPDCGDRSDELDCTPVS----VCDAPSRFKC-SSGECISAERVCDGQRDCGDASDE----PIRDCNVNECLSSNGGCSHLCVDLRLGFECSCPAGFRL--ANHTHCEDVDECVDADACSQMCVNLPGSYKCVCAEGYELDHMTRDCRAATGPEAFLLFSTRHEVRKLALGSREYTAVLRQQRNV------VALDVDVQRDTLYWSDLSQ-----RKIYSTTASNPTQNRTVIDSWISRPEGLAVDWVHRNIYWTDSEQRSVSVATADGSKRKTLIH--GLQNPRAIVLDPQSNFMFWSDWGVSARIERCGLNGADRTALVTDNIVWPNGIALDVLGRRLYWVDSKLHTLSSIGVDGNGRHTLIHDQQTLPHPLALAVFEEKVFWTDVANHGIWSANRLTGHEISAVLKHLQSPEDIVLYHSLTQPSGRDWCRESALLNGGCEFLCLPAPAINTHSPKYTCACPDHMTLAEDMRTCVP 645 HSP 2 Score: 63.1586 bits (152), Expect = 1.454e-9 Identity = 34/83 (40.96%), Postives = 43/83 (51.81%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE-------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKI--CVKNKC 348
CR +FLC +G C+P CDGH +CGD SDE +CD F CS I +CDG+ DC + D I C N+C
Sbjct: 171 CRPDEFLCADGGCVPGLRQCDGHPDCGDRSDELDCTPVSVCDAPSRFKCSSGECISAERVCDGQRDCGDASDEPIRDCNVNEC 253
BLAST of low-density lipoprotein receptor-like vs. Ensembl Zebrafish
Match: vldlr (very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]) HSP 1 Score: 363.614 bits (932), Expect = 1.100e-110 Identity = 263/864 (30.44%), Postives = 403/864 (46.64%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN----SIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSK----------------------------SQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKS-EFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXA--MYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
C + QF C NG+CIP CDG +C D SDE R+T F C I K CDG+ DC++ DE ++C C +++F C CI C+ DC +G DE + C N + F C + + C+SR + C+G+ DC D SDE++C S S S+ + C +E CG+G CI ++WRCDG DC + DE NCS C PD+ +C SC ++C+G+ DC D +DE C N +Q C+ ++FKC ++ CI +VC+K DC D SDE + C+ N C INNG C C + +C C PG ++ I+ C D++EC + +CS C N G YKCEC G+ M C AVG E L+++ + IR+L L R Y ++ +N + +D D+ + IFW + ++ K + V + PVG+A DWI+ ++WSD+ I+V N NG +K ++ + SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L RR V+ + AH F + VFED ++ +D +NE I +K TG L++S +P + ++H+L Q ++ N C N C ++CLP ++ K+ C+CP+ L +DG C S + +L VN +L + L+ + M+RN+ + K++ NF+NP Y + +L I + + Y +
Sbjct: 28 ECEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDETSCVRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDE-------------INCGNITCAPLEFTCSSGR-CVSRKFVCNGEDDCGDGSDEQDCAPSSCSPSEIPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGHNPTPPAKCSPSEMQCGSGE---CIHRKWRCDGDPDCKDG-SDEKNCSARNCRPDQ-FKCDD-GSCIHGSRQCNGFRDCVDGTDEVNCKNLTQ----CNSSDQFKC-RSGECIEMSKVCNKVRDCPDWSDE----PIKECNMNECLINNGGCSHICRDLTIGFECDCTPGLQL--IDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNT------VALDADFIQQMIFWADLG---QKAIFSTVLDKQDESHKK--VIDDVQMPVGIAVDWIYKNIYWSDLGSKSITVANF-NGTKKKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGNDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENEAIYGANKFTGSDVTLLASNLNEPQDIIVYHELIQ-LSGTNWCNEKMENGGCSFMCLPAPQINKHSPKYTCVCPEGQTLASDGLRCRAASSVSKVASEPVHTEGNLSTSIHEVNTSARGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKN-KKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAI 846
BLAST of low-density lipoprotein receptor-like vs. Ensembl Zebrafish
Match: vldlr (very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]) HSP 1 Score: 361.688 bits (927), Expect = 5.937e-110 Identity = 262/871 (30.08%), Postives = 406/871 (46.61%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN----SIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSK----------------------------SQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC-SPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXX---------XXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
C + QF C NG+CIP CDG +C D SDE R+T F C I K CDG+ DC++ DE ++C C +++F C CI C+ DC +G DE + C N + F C + + C+SR + C+G+ DC D SDE++C S S S+ + C +E CG+G CI ++WRCDG DC + DE NCS C PD+ +C SC ++C+G+ DC D +DE C N +Q C+ ++FKC ++ CI +VC+K DC D SDE + C+ N C INNG C C + +C C PG ++ I+ C D++EC + +CS C N G YKCEC G+ M C AVG E L+++ + IR+L L R Y ++ +N + +D D+ + IFW + ++ K + V + PVG+A DWI+ ++WSD+ I+V N NG +K ++ + SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L RR V+ + AH F + VFED ++ +D +NE I +K TG L++S +P + ++H+L Q ++ N C N C ++CLP ++ K+ C+CP+ L +DG C + S + V++ PK+ ++ + + + G M+RN+ + K++ NF+NP Y + +L I + + Y +
Sbjct: 28 ECEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDETSCVRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDE-------------INCGNITCAPLEFTCSSGR-CVSRKFVCNGEDDCGDGSDEQDCAPSSCSPSEIPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGHNPTPPAKCSPSEMQCGSGE---CIHRKWRCDGDPDCKDG-SDEKNCSARNCRPDQ-FKCDD-GSCIHGSRQCNGFRDCVDGTDEVNCKNLTQ----CNSSDQFKC-RSGECIEMSKVCNKVRDCPDWSDE----PIKECNMNECLINNGGCSHICRDLTIGFECDCTPGLQL--IDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNT------VALDADFIQQMIFWADLG---QKAIFSTVLDKQDESHKK--VIDDVQMPVGIAVDWIYKNIYWSDLGSKSITVANF-NGTKKKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGNDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENEAIYGANKFTGSDVTLLASNLNEPQDIIVYHELIQ-LSGTNWCNEKMENGGCSFMCLPAPQINKHSPKYTCVCPEGQTLASDGLRCRAEATSAAPQDGGQVTTRPSHPKEGNLSTSIHEVNTSARGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKN-KKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAI 853
BLAST of low-density lipoprotein receptor-like vs. Ensembl Zebrafish
Match: vldlr (very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]) HSP 1 Score: 361.303 bits (926), Expect = 6.325e-110 Identity = 261/864 (30.21%), Postives = 407/864 (47.11%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDN----SIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSK----------------------------SQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDS 2568
C + QF C NG+CIP CDG +C D SDE R+T F C I K CDG+ DC++ DE ++C C +++F C CI C+ DC +G DE + C N + F C + + C+SR + C+G+ DC D SDE++C S S S+ + C +E CG+G CI ++WRCDG DC + DE NCS C PD+ +C SC ++C+G+ DC D +DE C N +Q C+ ++FKC ++ CI +VC+K DC D SDE + C+ N C INNG C C + +C C PG ++ I+ C D++EC + +CS C N G YKCEC G+ M C AVG E L+++ + IR+L L R Y ++ +N + +D D+ + IFW + ++ K + V + PVG+A DWI+ ++WSD+ I+V N NG +K ++ + SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L RR V+ + AH F + VFED ++ +D +NE I +K TG L++S +P + ++H+L Q ++ N C N C ++CLP ++ K+ C+CP+ L +DG C + +I ++S + + + +L+ + G M+RN+ + K++ NF+NP Y + +L I + + Y + ++
Sbjct: 28 ECEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDETSCVRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDE-------------INCGNITCAPLEFTCSSGR-CVSRKFVCNGEDDCGDGSDEQDCAPSSCSPSEIPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGHNPTPPAKCSPSEMQCGSGE---CIHRKWRCDGDPDCKDG-SDEKNCSARNCRPDQ-FKCDD-GSCIHGSRQCNGFRDCVDGTDEVNCKNLTQ----CNSSDQFKC-RSGECIEMSKVCNKVRDCPDWSDE----PIKECNMNECLINNGGCSHICRDLTIGFECDCTPGLQL--IDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNT------VALDADFIQQMIFWADLG---QKAIFSTVLDKQDESHKK--VIDDVQMPVGIAVDWIYKNIYWSDLGSKSITVANF-NGTKKKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGNDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENEAIYGANKFTGSDVTLLASNLNEPQDIIVYHELIQ-LSGTNWCNEKMENGGCSFMCLPAPQINKHSPKYTCVCPEGQTLASDGLRCRAEGN--LSTSIHEVNTSARGSAAAWAIL---------PVLLLAMAAAGGYLMWRNWQIKN-KKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAVSNA 835
BLAST of low-density lipoprotein receptor-like vs. Ensembl Xenopus
Match: pigs (phosphatidylinositol glycan anchor biosynthesis class S [Source:Xenbase;Acc:XB-GENE-1005014]) HSP 1 Score: 391.349 bits (1004), Expect = 4.081e-121 Identity = 261/767 (34.03%), Postives = 380/767 (49.54%), Query Frame = 1
Query: 112 QYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKT-IXXXXXXLKPKQSRVNV 2346
Q +C R +F C +GKCIP CDG C D SDE + + TC + L CDG+ DC+N D C + C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE++C E +K C EF+CG+G CI W+CDG YDC + DE +C C PD+ +C +C ++CD DC D SDEE C N ++ C+ + FKC ++ CI +VC+K DC D SDE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + CS C N G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y + KN + +D + S I+W+ + + T++ S+I +P G+A DWIHG ++W+D F+ ISV N RKTL + +K R IVV P ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S ++ R V+S HL AH F + VFED ++ +D +NE I ++ TG K+ P + L+H L QP EN C +H C+YLCLP + KF C CPD +L D ++C + + T + + + +PK + V
Sbjct: 10 QNGGKCDRSEFQCGDGKCIPYKWICDGSAECKDGSDESPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRSG--KCISLDFVCDEDLDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDPDCEDGSDEQHCEGREP-----------IKTDKPCSPLEFHCGSGE---CIHMSWKCDGGYDCKDK-SDEKDCVKPTCRPDE-FQCND-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CEGPDVFKC-RSGECITMDKVCNKKRDCRDWSDE----PIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRL--VDKKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMDKADNTSHHETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFS-DDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSCIDVTGQNRITVISDETHL-AHPFGLTVFEDLVFWTDIENEAIFSANRLTGSNITKVAEDLLSPEDIVLYHNLRQP-KAENWCESHHLGNGGCEYLCLPAPLITSRSPKFTCACPDGMHLGADMRSCVKGSTTLAKITSTTSTVAPQRPKMASTTV 726
BLAST of low-density lipoprotein receptor-like vs. Ensembl Xenopus
Match: pigs (phosphatidylinositol glycan anchor biosynthesis class S [Source:Xenbase;Acc:XB-GENE-1005014]) HSP 1 Score: 391.734 bits (1005), Expect = 8.354e-121 Identity = 256/735 (34.83%), Postives = 369/735 (50.20%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
++C R +F C +GKCIP CDG C D SDE + + TC + L CDG+ DC+N D C + C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE++C E +K C EF+CG+G CI W+CDG YDC + DE +C C PD+ +C +C ++CD DC D SDEE C N ++ C+ + FKC ++ CI +VC+K DC D SDE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + CS C N G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y + KN + +D + S I+W+ + + T++ S+I +P G+A DWIHG ++W+D F+ ISV N RKTL + +K R IVV P ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S ++ R V+S HL AH F + VFED ++ +D +NE I ++ TG K+ P + L+H L QP EN C +H C+YLCLP + KF C CPD +L D ++C
Sbjct: 9 RKCDRSEFQCGDGKCIPYKWICDGSAECKDGSDESPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRSG--KCISLDFVCDEDLDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDPDCEDGSDEQHCEGREP-----------IKTDKPCSPLEFHCGSGE---CIHMSWKCDGGYDCKDK-SDEKDCVKPTCRPDE-FQCND-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CEGPDVFKC-RSGECITMDKVCNKKRDCRDWSDE----PIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRL--VDKKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMDKADNTSHHETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFS-DDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSCIDVTGQNRITVISDETHL-AHPFGLTVFEDLVFWTDIENEAIFSANRLTGSNITKVAEDLLSPEDIVLYHNLRQP-KAENWCESHHLGNGGCEYLCLPAPLITSRSPKFTCACPDGMHLGADMRSC 693
BLAST of low-density lipoprotein receptor-like vs. Ensembl Xenopus
Match: pigs (phosphatidylinositol glycan anchor biosynthesis class S [Source:Xenbase;Acc:XB-GENE-1005014]) HSP 1 Score: 390.193 bits (1001), Expect = 9.605e-121 Identity = 256/735 (34.83%), Postives = 369/735 (50.20%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
++C R +F C +GKCIP CDG C D SDE + + TC + L CDG+ DC+N D C + C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE++C E +K C EF+CG+G CI W+CDG YDC + DE +C C PD+ +C +C ++CD DC D SDEE C N ++ C+ + FKC ++ CI +VC+K DC D SDE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + CS C N G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y + KN + +D + S I+W+ + + T++ S+I +P G+A DWIHG ++W+D F+ ISV N RKTL + +K R IVV P ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S ++ R V+S HL AH F + VFED ++ +D +NE I ++ TG K+ P + L+H L QP EN C +H C+YLCLP + KF C CPD +L D ++C
Sbjct: 5 RKCDRSEFQCGDGKCIPYKWICDGSAECKDGSDESPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRSG--KCISLDFVCDEDLDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDPDCEDGSDEQHCEGREP-----------IKTDKPCSPLEFHCGSGE---CIHMSWKCDGGYDCKDK-SDEKDCVKPTCRPDE-FQCND-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CEGPDVFKC-RSGECITMDKVCNKKRDCRDWSDE----PIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRL--VDKKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMDKADNTSHHETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFS-DDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSCIDVTGQNRITVISDETHL-AHPFGLTVFEDLVFWTDIENEAIFSANRLTGSNITKVAEDLLSPEDIVLYHNLRQP-KAENWCESHHLGNGGCEYLCLPAPLITSRSPKFTCACPDGMHLGADMRSC 689
BLAST of low-density lipoprotein receptor-like vs. Ensembl Xenopus
Match: pigs (phosphatidylinositol glycan anchor biosynthesis class S [Source:Xenbase;Acc:XB-GENE-1005014]) HSP 1 Score: 391.349 bits (1004), Expect = 1.690e-120 Identity = 256/735 (34.83%), Postives = 369/735 (50.20%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
++C R +F C +GKCIP CDG C D SDE + + TC + L CDG+ DC+N D C + C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE++C E +K C EF+CG+G CI W+CDG YDC + DE +C C PD+ +C +C ++CD DC D SDEE C N ++ C+ + FKC ++ CI +VC+K DC D SDE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + CS C N G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y + KN + +D + S I+W+ + + T++ S+I +P G+A DWIHG ++W+D F+ ISV N RKTL + +K R IVV P ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S ++ R V+S HL AH F + VFED ++ +D +NE I ++ TG K+ P + L+H L QP EN C +H C+YLCLP + KF C CPD +L D ++C
Sbjct: 27 RKCDRSEFQCGDGKCIPYKWICDGSAECKDGSDESPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRSG--KCISLDFVCDEDLDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDPDCEDGSDEQHCEGREP-----------IKTDKPCSPLEFHCGSGE---CIHMSWKCDGGYDCKDK-SDEKDCVKPTCRPDE-FQCND-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CEGPDVFKC-RSGECITMDKVCNKKRDCRDWSDE----PIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRL--VDKKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMDKADNTSHHETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFS-DDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSCIDVTGQNRITVISDETHL-AHPFGLTVFEDLVFWTDIENEAIFSANRLTGSNITKVAEDLLSPEDIVLYHNLRQP-KAENWCESHHLGNGGCEYLCLPAPLITSRSPKFTCACPDGMHLGADMRSC 711
BLAST of low-density lipoprotein receptor-like vs. Ensembl Xenopus
Match: pigs (phosphatidylinositol glycan anchor biosynthesis class S [Source:Xenbase;Acc:XB-GENE-1005014]) HSP 1 Score: 390.193 bits (1001), Expect = 4.800e-120 Identity = 256/736 (34.78%), Postives = 370/736 (50.27%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNI-ENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
++C R +F C +GKCIP CDG C D SDE + + TC + L CDG+ DC+N D C + C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE++C E +K C EF+CG+G CI W+CDG YDC + DE +C C PD+ +C +C ++CD DC D SDEE C N ++ C+ + FKC ++ CI +VC+K DC D SDE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + CS C N G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y + KN + +D + S I+W+ + + T++ S+I +P G+A DWIHG ++W+D F+ ISV N RKTL + +K R IVV P ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S ++ R V+S HL AH F + VFED ++ +D +NE I ++ TG K+ P + L+H L QP + EN C +H C+YLCLP + KF C CPD +L D ++C
Sbjct: 23 RKCDRSEFQCGDGKCIPYKWICDGSAECKDGSDESPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRSG--KCISLDFVCDEDLDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDPDCEDGSDEQHCEGREP-----------IKTDKPCSPLEFHCGSGE---CIHMSWKCDGGYDCKDK-SDEKDCVKPTCRPDE-FQCND-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CEGPDVFKC-RSGECITMDKVCNKKRDCRDWSDE----PIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRL--VDKKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMDKADNTSHHETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFS-DDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSCIDVTGQNRITVISDETHL-AHPFGLTVFEDLVFWTDIENEAIFSANRLTGSNITKVAEDLLSPEDIVLYHNLRQPKGMTENWCESHHLGNGGCEYLCLPAPLITSRSPKFTCACPDGMHLGADMRSC 709 HSP 2 Score: 60.077 bits (144), Expect = 1.923e-8 Identity = 47/143 (32.87%), Postives = 68/143 (47.55%), Query Frame = 1
Query: 613 ENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL-NCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
E++ S +L L + C +EF CG G CI +W CDGS +C + + C C D + ++ C +CDG DC + SDE C+ V D ++F C ++ CI+ VCD+ DC DGSDE
Sbjct: 6 EHTTLFSVALFALYLEVRKCDRSEFQCGDGK---CIPYKWICDGSAECKDGSDESPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCT----RKVCAD--DQFTC-RSGKCISLDFVCDEDLDCDDGSDE 138
BLAST of low-density lipoprotein receptor-like vs. Ensembl Mouse
Match: Ldlr (low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:96765]) HSP 1 Score: 374.4 bits (960), Expect = 1.149e-114 Identity = 254/734 (34.60%), Postives = 371/734 (50.54%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSD---------SNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI---ENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C R +F C++GKCI CDG C D SDE + + TC S I + CDG+ DC+ND D + C CS D F C+ CIS +C+ + DC DGSDE+ C+ C HF+C N +CI ++ CDG DC D SDE +NC + + S+ + S+ C + EF+CG+ CI + W CDG DC + DE +C+ C PD+ +C SC ++CD DC D SDE C N +Q CD N+FKC + CI+ +VCD DC D SDE + C N C NNG C C + +CLC G+R+ ++ +C DIDEC + CS C N GSYKCEC GF+M + C AVG +LL++ ++ +R++ L R Y +L + KN + +D + + I+W+ + L+ + N+ T++ +H+P GLA DWIH ++W+D +SV + R+TL + S+ R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ N AH F + ++ED +Y +D NE I ++ TG LV+ P + LFH++ QP + E + N CQYLCLP + KF C CPD L D ++C
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPDSWRCDGQVDCENDSDEQGCPPKTCSQDDFRCQDG--KCISPQFVCDGDRDCLDGSDEA--HCQ------ATTC-GPAHFRC-NSSICIPSLWACDGDVDCVDGSDEWPQNC---QGRDTASKGV------SSPCSSLEFHCGSSE---CIHRSWVCDGEADCKDK-SDEEHCAVATCRPDE-FQCAD-GSCIHGSRQCDREHDCKDMSDELGCVNVTQ----CDGPNKFKC-HSGECISLDKVCDSARDCQDWSDE----PIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL--VDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVGSIGYLLFTNRHEVRKMTLDRSEYTSLLPNLKNV------VALDTEVTNNRIYWSDLS---QKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAG-SRPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSLAIYEDKVYWTDVINEAIFSANRLTGSDVNLVAENLLSPEDIVLFHKVTQPRGVNWCETTALLPNGGCQYLCLPAPQIGPHSPKFTCACPDGMLLAKDMRSC 712
BLAST of low-density lipoprotein receptor-like vs. Ensembl Mouse
Match: Vldlr (very low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:98935]) HSP 1 Score: 360.533 bits (924), Expect = 1.409e-109 Identity = 265/838 (31.62%), Postives = 397/838 (47.37%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTI---CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEI-VQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ--KILVSSPKPMGVKLFHQLAQPVN---IENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
K C F+C+NG+C+P CDG +C D SDE + TC + I I + CDG+ DCDN ED + C CS D+F C + C+S+ +CN +DC DGSDE +P C + FQC CI + CD +DCSDQSDE SL +Q I C +E CG+G CI K+WRCDG DC + DE+NC + C PD+ C+ SC ++C+G DC D SDE C N +Q C +FKC ++ CI +VCD+ DC D SDE + C N C +NNG C C + +C C G+ + I+ C DIDEC + +CS C N G YKCEC G+ M C AVG E L+++ + IR++ L R Y+ ++ +N + +D D ++ +FW ID V + M +++P +A DW++ ++W+D ISV + RK L + + SI V P ++W+DWG+ KIE GM+G DR+ L+ + + PNG+ LD LYW+D+K +S +L RR V+ L AH + +FED +Y D +NE + +K TG + ++ + + ++H+L QP E+ N C+YLCLP ++ K+ C CP+ L +G+ C + T +VS S+ PK + + LL+ ++ G M+RN+ + +K + NF+NP Y + +L I + + Y +
Sbjct: 70 KTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSG--RCVSRNFVCNGQDDCDDGSDELDCAPPTC------------GAHEFQCSTSS-CIPLSWVCDDDADCSDQSDE--------------SLEQCGRQPVIHTKCPTSEIQCGSGE---CIHKKWRCDGDPDCKDG-SDEVNCPSRTCRPDQ-FECED-GSCIHGSRQCNGIRDCVDGSDEVNCKNVNQ----CLGPGKFKC-RSGECIDMSKVCDQEQDCRDWSDE----PLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL--IDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNT------VALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKM------IDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFN-SDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGREC-----QRINVTTAVSEVSVPPKGTSA-------AWAILPLLLLVMAAVGGYLMWRNWQHKNMK-SMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAI 835 HSP 2 Score: 94.7449 bits (234), Expect = 3.017e-19 Identity = 84/234 (35.90%), Postives = 109/234 (46.58%), Query Frame = 1
Query: 337 KNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
K KC QF C CI+ C+ + DC+DGSDE K V + F C+N Q C+ + CDG DC D SDE P+ + ++ C+ NE CGA ST CI WRCDG DC + +DE NC N CS D+ C + C + C+G DC D SDE C+ P+ +EF+C ++CI VCD DC D SDE
Sbjct: 30 KAKCDSSQFQCTNG--RCITLLWKCDGDEDCADGSDE---------KNCVKKTCAESDFVCKNGQ-CVPNRWQCDGDPDCEDGSDES--PEQCHMRT--------------CRINEISCGARST-QCIPVSWRCDGENDC-DNGEDEENCGNITCSADEFT-CSS-GRCVSRNFVCNGQDDCDDGSDELDCAPPTCG------AHEFQC-STSSCIPLSWVCDDDADCSDQSDE 224 HSP 3 Score: 58.9214 bits (141), Expect = 3.277e-8 Identity = 49/161 (30.43%), Postives = 76/161 (47.20%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-CDHR----ETFTCSDSNIILKTELCDGKADCDNDEDPKICVK-NKC-SIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEI------------INKPLVV--QCDNSIHFQCENKQLC 537
+ +C + C +G+CI + CDG +C D SDE+ C R + F C D + I + C+G DC + D C N+C +F CR+ CI + +C+ DC D SDE + C I I K LV+ +CD + F+ +++ C
Sbjct: 236 HTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSG--ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTC 394
BLAST of low-density lipoprotein receptor-like vs. Ensembl Mouse
Match: Vldlr (very low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:98935]) HSP 1 Score: 359.762 bits (922), Expect = 5.229e-109 Identity = 266/854 (31.15%), Postives = 396/854 (46.37%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTI---CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEI-VQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSSPK-PMGVKLFHQLAQPVN---IENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEF-------FRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXX---------XXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
K C F+C+NG+C+P CDG +C D SDE + TC + I I + CDG+ DCDN ED + C CS D+F C + C+S+ +CN +DC DGSDE +P C + FQC CI + CD +DCSDQSDE SL +Q I C +E CG+G CI K+WRCDG DC + DE+NC + C PD+ C+ SC ++C+G DC D SDE C N +Q C +FKC ++ CI +VCD+ DC D SDE + C N C +NNG C C + +C C G+ + I+ C DIDEC + +CS C N G YKCEC G+ M C AVG E L+++ + IR++ L R Y+ ++ +N + +D D ++ +FW ID V + M +++P +A DW++ ++W+D ISV + RK L + + SI V P ++W+DWG+ KIE GM+G DR+ L+ + + PNG+ LD LYW+D+K +S +L RR V+ L AH + +FED +Y D +NE + +K TG + LV++ + ++H+L QP E+ N C+YLCLP ++ K+ C CP+ L +G+ C T + T + +S L P V + V + ++ G M+RN+ + +K + NF+NP Y + +L I + + Y +
Sbjct: 70 KTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSG--RCVSRNFVCNGQDDCDDGSDELDCAPPTC------------GAHEFQCSTSS-CIPLSWVCDDDADCSDQSDE--------------SLEQCGRQPVIHTKCPTSEIQCGSGE---CIHKKWRCDGDPDCKDG-SDEVNCPSRTCRPDQ-FECED-GSCIHGSRQCNGIRDCVDGSDEVNCKNVNQ----CLGPGKFKC-RSGECIDMSKVCDQEQDCRDWSDE----PLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL--IDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNT------VALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKM------IDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFN-SDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDINTTDILRTSGLVPGGINVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMK-SMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAI 863 HSP 2 Score: 95.1301 bits (235), Expect = 2.130e-19 Identity = 84/234 (35.90%), Postives = 109/234 (46.58%), Query Frame = 1
Query: 337 KNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
K KC QF C CI+ C+ + DC+DGSDE K V + F C+N Q C+ + CDG DC D SDE P+ + ++ C+ NE CGA ST CI WRCDG DC + +DE NC N CS D+ C + C + C+G DC D SDE C+ P+ +EF+C ++CI VCD DC D SDE
Sbjct: 30 KAKCDSSQFQCTNG--RCITLLWKCDGDEDCADGSDE---------KNCVKKTCAESDFVCKNGQ-CVPNRWQCDGDPDCEDGSDES--PEQCHMRT--------------CRINEISCGARST-QCIPVSWRCDGENDC-DNGEDEENCGNITCSADEFT-CSS-GRCVSRNFVCNGQDDCDDGSDELDCAPPTCG------AHEFQC-STSSCIPLSWVCDDDADCSDQSDE 224 HSP 3 Score: 59.3066 bits (142), Expect = 2.751e-8 Identity = 49/161 (30.43%), Postives = 76/161 (47.20%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-CDHR----ETFTCSDSNIILKTELCDGKADCDNDEDPKICVK-NKC-SIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEI------------INKPLVV--QCDNSIHFQCENKQLC 537
+ +C + C +G+CI + CDG +C D SDE+ C R + F C D + I + C+G DC + D C N+C +F CR+ CI + +C+ DC D SDE + C I I K LV+ +CD + F+ +++ C
Sbjct: 236 HTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSG--ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTC 394
BLAST of low-density lipoprotein receptor-like vs. Ensembl Mouse
Match: Vldlr (very low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:98935]) HSP 1 Score: 357.066 bits (915), Expect = 8.383e-109 Identity = 265/835 (31.74%), Postives = 397/835 (47.54%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTI---CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEI-VQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSSPK-PMGVKLFHQLAQPVN---IENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
+C QF C NG+CI CDG ++C D SDE ++T F C + + CDG DC++ DE P+ C CS D+F C + C+S+ +CN +DC DGSDE +P C + FQC CI + CD +DCSDQSDE SL +Q I C +E CG+G CI K+WRCDG DC + DE+NC + C PD+ C+ SC ++C+G DC D SDE C N +Q C +FKC ++ CI +VCD+ DC D SDE + C N C +NNG C C + +C C G+ + I+ C DIDEC + +CS C N G YKCEC G+ M C AVG E L+++ + IR++ L R Y+ ++ +N + +D D ++ +FW ID V + M +++P +A DW++ ++W+D ISV + RK L + + SI V P ++W+DWG+ KIE GM+G DR+ L+ + + PNG+ LD LYW+D+K +S +L RR V+ L AH + +FED +Y D +NE + +K TG + LV++ + ++H+L QP E+ N C+YLCLP ++ K+ C CP+ L +G+ C + T +VS S+ PK + + LL+ ++ G M+RN+ + +K + NF+NP Y + +L I + + Y +
Sbjct: 32 KCDSSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCRNITCSADEFTCSSG--RCVSRNFVCNGQDDCDDGSDELDCAPPTC------------GAHEFQCSTSS-CIPLSWVCDDDADCSDQSDE--------------SLEQCGRQPVIHTKCPTSEIQCGSGE---CIHKKWRCDGDPDCKDG-SDEVNCPSRTCRPDQ-FECED-GSCIHGSRQCNGIRDCVDGSDEVNCKNVNQ----CLGPGKFKC-RSGECIDMSKVCDQEQDCRDWSDE----PLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL--IDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRN------TVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKM------IDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFN-SDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGREC-----QRINVTTAVSEVSVPPKGTSA-------AWAILPLLLLVMAAVGGYLMWRNWQHKNMK-SMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAI 794 HSP 2 Score: 59.3066 bits (142), Expect = 2.304e-8 Identity = 49/161 (30.43%), Postives = 76/161 (47.20%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI-CDHR----ETFTCSDSNIILKTELCDGKADCDNDEDPKICVK-NKC-SIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEI------------INKPLVV--QCDNSIHFQCENKQLC 537
+ +C + C +G+CI + CDG +C D SDE+ C R + F C D + I + C+G DC + D C N+C +F CR+ CI + +C+ DC D SDE + C I I K LV+ +CD + F+ +++ C
Sbjct: 195 HTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSG--ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTC 353
BLAST of low-density lipoprotein receptor-like vs. Ensembl Mouse
Match: Lrp4 (low density lipoprotein receptor-related protein 4 [Source:MGI Symbol;Acc:MGI:2442252]) HSP 1 Score: 368.622 bits (945), Expect = 3.418e-107 Identity = 253/752 (33.64%), Postives = 363/752 (48.27%), Query Frame = 1
Query: 127 CRRFQFLCQNGK-----CIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCD----NSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSK---------SKSQSLADLVKQSTI-----------------CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNL----CKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMK-PRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPK--PMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICP 2226
C R F C CIP CDG ++CGD+SDE C + F C + I ++ +CDG DC++D D + C +C D+F C+ CI C+ +NDC D SDE QCD + F+C + CI+ +YCDG +DC D SDE++CP + S + + + D+ C++ EF C +G CI WRCDG DC + DE NC+ C+ ++ RC++ C RCDG DC DNSDEE C N + D +F C N CI +++C+ NDCGD SDE P +NC C +NNG C QKC +C C GYR+ T C D++ECA+ CS C N G+++C C G+ + D + C A+G E LL++ + IR++ R Y +L + +N I +DF ++ + +FW+ V +D ++ N +V + + SP GLA DW+H L+W+D + I V N+ RK L+ + K R+I +HP I+WTDWG P+IE MDG R+++ L+ PNGL +DY +YWVDAK I NL R+ V+S H F I VFED LY +DW + I +K TGK + ++ + PM + H QP +N C N C +LCLP+ N + C CP
Sbjct: 27 CGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLD-FHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNG--YCIRSLWHCDGDNDCGDNSDE--------------QCDMRKCSDKEFRCSDGS-CIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCDSGL---CINSGWRCDGDADC-DDQSDERNCTTSMCTAEQ-FRCRS-GRCVRLSWRCDGEDDCADNSDEENCENTGSPQCASD---QFLCW-NGRCIGQRKLCNGINDCGDSSDESP---QQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLTEDGRT-CQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENA------IALDFHHRRELVFWSD-------VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAG-KNRCGDNNGGCTHLCLPSGQN------YTCACP 725 HSP 2 Score: 183.341 bits (464), Expect = 1.776e-46 Identity = 111/358 (31.01%), Postives = 167/358 (46.65%), Query Frame = 1
Query: 1222 CSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLV-SKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTG--KQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFF 2286
C+H C +Y C C GF ++ C +KFLL++ + IR + + P + + +D+D + +++WT V D + +K +V + + SP GLA DW+ L+W+D + I V N MR L+ N + R IVV P ++WTDWG PKIE GMD R+V+I L PNGLA+DY LYW DA + I L +R+ ++ H F + ++ +Y +DW + I + TG ++ + + M + +FH+ PV A N C +LCL + N F C CP LL DGKTCSP + F
Sbjct: 709 CTHLCLPSGQNYTCACPTGF-RKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRS--AVALDWDSRDDHVYWTD-------VSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLI-WENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRQRPPVTTLCAVENGGCSHLCLRSP----NPSGFSCTCPTGINLLRDGKTCSPGMNSFL 1051 HSP 3 Score: 165.236 bits (417), Expect = 9.321e-41 Identity = 111/363 (30.58%), Postives = 167/363 (46.01%), Query Frame = 1
Query: 1222 CSHKCANYL--GSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPT-SNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTG--NMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIEN-ACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFF 2286
CSH C + C C G + +D K C FL+++ + +R + L Y + P N T N + IG+D ++W+ H +S+ + ++ + + + GLA D I ++W+D N I V N+ MRK LV N R+IV++ + ++WTDWG+ K+E GMDG DR VLI + L PNGL +D L W DA T +I V +L R +VS + H + + + + ++Y +DW I + K TG ILV S P M ++ + AQP+ N C +LCLP F C CP L D KTC P+ +
Sbjct: 1013 CSHLCLRSPNPSGFSCTCPTGINLLRDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVD--PLEGKVYWSD--------STLHRISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLV-WQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVSPVQ-HPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDR-AQPLGFNKCGSRNGGCSHLCLPRPSG------FSCACPTGIQLKGDRKTCDPSPETYL 1356 HSP 4 Score: 157.147 bits (396), Expect = 2.598e-38 Identity = 112/377 (29.71%), Postives = 176/377 (46.68%), Query Frame = 1
Query: 1150 PGYR-IDSINETKCIDIDECAD-HMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTG-NMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCS 2265
PG I +++ + + ++C + CSH C + C C G + D K C E +LL+S++ SIR + L ++ P +N I +D+D +++T + + G NM+ T++ + + GLA DW+ L+W+D N I + RK L+ + + R+I V P+ +FWTDWG KIE +DG +RKVLI L PNGL LDY +YWVDA +I +L R+ +VSH+ +H F + + W+Y +DW + I ++ K +G+ K V + + + Q NAC N C +LC + + F C CPD DG CS
Sbjct: 1294 PGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNV--ISLDYDSVHGKVYYTDV-----FLDVIRRADLNGSNME--TVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN-NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHV-SHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTGTNACGVNNGGCTHLCFARASD------FVCACPDEP----DGHPCS 1649 HSP 5 Score: 73.9442 bits (180), Expect = 1.132e-12 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKN---KCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPE 456
++ CR +F+C +G CI CDG +C D SDE +C E F C + + CDG+ DC ++ D + C +C+ DQF+C CI + LCN NDC D SDESP+
Sbjct: 228 HQPCRSGEFMCDSGLCINSGWRCDGDADCDDQSDERNCTTSMCT-AEQFRCRSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCASDQFLCWNG--RCIGQRKLCNGINDCGDSSDESPQ 346
BLAST of low-density lipoprotein receptor-like vs. UniProt/SwissProt
Match: sp|Q99087|LDLR1_XENLA (Low-density lipoprotein receptor 1 OS=Xenopus laevis OX=8355 GN=ldlr-a PE=1 SV=1) HSP 1 Score: 390.193 bits (1001), Expect = 2.943e-119 Identity = 253/735 (34.42%), Postives = 371/735 (50.48%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP--KPMGVKLFHQLAQPVNIENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
++C R +F C +GKCIP CDG C D+SDE + TC L CDG+ DC+N D C C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE++C E +K C EF+CG+G CI W+CDG +DC + DE +C C PD+ +C T +C ++CD DC D SDEE C N ++ C+ + FKC ++ CI +VC+K DC D SDE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + CS C N +G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y ++ KN + +D + S I+W+ + + T++ ++I +P G+A DWIHG ++W+D F+ ISV N T G ++ + K R IVV P ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S ++ RR V+S HL AH F + +FED ++ +D +NE I ++ TG+ + V+ P + L+H L QP EN C H C+YLCLP KF C CPD +L +D ++C
Sbjct: 25 RKCDRNEFQCGDGKCIPYKWICDGSAECKDSSDESPETCREVTCGTDQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTHKVCADDQFTCRSG--KCISLDFVCDEDLDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDPDCEDGSDEEHCEGREP-----------IKTDKPCSPLEFHCGSGE---CIHMSWKCDGGFDCKDK-SDEKDCVKPTCRPDQ-FQCNT-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CEGPDVFKC-RSGECITMDKVCNKKRDCRDWSDE----PLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRL--VDQKRCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSVIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMEKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVAN-TEGSKRRTPPSDDLEKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLSCIDVTGENRRTVISDETHL-AHPFGLTIFEDLVFWTDIENEAIFSANRLTGRNIMKVAEDLLSPEDIVLYHNLRQP-KAENWCEAHHLGNGGCEYLCLPAPHITARSPKFTCACPDGMHLGDDMRSC 709 HSP 2 Score: 68.1662 bits (165), Expect = 2.949e-10 Identity = 69/220 (31.36%), Postives = 89/220 (40.45%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGK----------------------------------------CIPETLHCDGHDNCGDNSDEI-CDHRET-----------FTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSE 615
+K C QF C++GK CIP+ CDG +C D SDE C+ RE F C I + CDG DC + D K CVK C DQF C T CI + C+ DC D SDE E C +N V +C+ F+C + + CI+ C+ K DC D SDE K C ++E
Sbjct: 106 HKVCADDQFTCRSGKCISLDFVCDEDLDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCEDGSDEEHCEGREPIKTDKPCSPLEFHCGSGECIHMSWKCDGGFDCKDKSDEKDCVKPTCRPDQFQCNTG--TCIHGSRQCDREYDCKDLSDE--EGC--VN---VTKCEGPDVFKCRSGE-CITMDKVCNKKRDCRDWSDEPLKECGENE 315
BLAST of low-density lipoprotein receptor-like vs. UniProt/SwissProt
Match: sp|P35951|LDLR_MOUSE (Low-density lipoprotein receptor OS=Mus musculus OX=10090 GN=Ldlr PE=1 SV=2) HSP 1 Score: 374.4 bits (960), Expect = 8.037e-114 Identity = 254/734 (34.60%), Postives = 371/734 (50.54%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSD---------SNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI---ENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C R +F C++GKCI CDG C D SDE + + TC S I + CDG+ DC+ND D + C CS D F C+ CIS +C+ + DC DGSDE+ C+ C HF+C N +CI ++ CDG DC D SDE +NC + + S+ + S+ C + EF+CG+ CI + W CDG DC + DE +C+ C PD+ +C SC ++CD DC D SDE C N +Q CD N+FKC + CI+ +VCD DC D SDE + C N C NNG C C + +CLC G+R+ ++ +C DIDEC + CS C N GSYKCEC GF+M + C AVG +LL++ ++ +R++ L R Y +L + KN + +D + + I+W+ + L+ + N+ T++ +H+P GLA DWIH ++W+D +SV + R+TL + S+ R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ N AH F + ++ED +Y +D NE I ++ TG LV+ P + LFH++ QP + E + N CQYLCLP + KF C CPD L D ++C
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPDSWRCDGQVDCENDSDEQGCPPKTCSQDDFRCQDG--KCISPQFVCDGDRDCLDGSDEA--HCQ------ATTC-GPAHFRC-NSSICIPSLWACDGDVDCVDGSDEWPQNC---QGRDTASKGV------SSPCSSLEFHCGSSE---CIHRSWVCDGEADCKDK-SDEEHCAVATCRPDE-FQCAD-GSCIHGSRQCDREHDCKDMSDELGCVNVTQ----CDGPNKFKC-HSGECISLDKVCDSARDCQDWSDE----PIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL--VDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVGSIGYLLFTNRHEVRKMTLDRSEYTSLLPNLKNV------VALDTEVTNNRIYWSDLS---QKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAG-SRPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSLAIYEDKVYWTDVINEAIFSANRLTGSDVNLVAENLLSPEDIVLFHKVTQPRGVNWCETTALLPNGGCQYLCLPAPQIGPHSPKFTCACPDGMLLAKDMRSC 712
BLAST of low-density lipoprotein receptor-like vs. UniProt/SwissProt
Match: sp|P20063|LDLR_RABIT (Low-density lipoprotein receptor (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=LDLR PE=2 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 1.258e-112 Identity = 249/736 (33.83%), Postives = 356/736 (48.37%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDES---PEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEI-VQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI----ENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
+C R +F C+NGKCI CDG C D SDE + TC + L CDG+ DC++ D C CS D+F C CIS+ C+ DC DGSDE+ P C HF+C N C+ ++ CDG+ DC D SDE P ++ Q C +EF+CG+G C+ WRCDG DC + DE +C+ C PD+ +C +C ++CD DC D SDE C N + C+ ++FKC + CI+ +VC+ DC D SDE + C N C NG C C + +C C GYR+ +++ +C DI+EC D +CS C N GSYKCEC GF + ++ C AV +L ++ ++ +R++ L R Y ++ + KN + +D + S I+W+ QID G T++ S + +P GLA DWIHG ++W+D +SV + RKTL R SK R+IVV P + ++WTDWG KIE G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ V+ AH F + +FED ++ +D NE I ++ TG LV+ P + LFH L QP + + A N CQYLCLP + KF C CPD + L D ++C
Sbjct: 13 KCGRNEFQCRNGKCISYKWVCDGSSECQDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIPGHWKCDGQQDCEDGSDELGCAPKTCSQDEFRCAEGA--CISRLFACDGEPDCPDGSDEASCAPSTC------------GPAHFRC-NSSSCVPALWACDGEPDCDDGSDEW--PARCGARPSPQ------PGRGPCSRHEFHCGSGE---CVHASWRCDGDADCRDG-SDERDCAAATCRPDE-FQCSD-GTCIHGSRQCDQQQDCGDMSDEVGCVNVTL----CEGPDKFKC-HSGECISLDKVCNSARDCQDWSDE----PIKECATNECMRGNGGCSHTCFDLRIGHECHCPKGYRL--VDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAVDSIAYLFFTNRHEVRKMTLDRSEYTSLIANLKNV------VALDAEVASNRIYWSDLSQRKIYSAQID---GAHGFPAYDTVISSDLQAPDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQ-EGSKPRAIVVDPAHGFMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEQRLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDVHLVAENLLSPEDIVLFHNLTQPRGVNWCEKTALPNGGCQYLCLPAPQINSHSPKFTCACPDGTLLAADMRSC 698
BLAST of low-density lipoprotein receptor-like vs. UniProt/SwissProt
Match: sp|Q99088|LDLR2_XENLA (Low-density lipoprotein receptor 2 OS=Xenopus laevis OX=8355 GN=ldlr-b PE=2 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 5.147e-112 Identity = 252/734 (34.33%), Postives = 360/734 (49.05%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS---HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP--KPMGVKLFHQLAQPVNIENACINH-----TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
+C R +F C +GKCIP CDG C D SDE + TC L CDG+ DC+N D C + C+ DQF CR+ CIS +C+ + DC DGSDES N + FQC++K +CI +++ CDG DC D SDE +C E +K C EF+CG+G CI W+CD YDC D+ +C C PD+ +C +C ++CD DC D SDEE C N ++ C + FKC ++ CI +VC K DC D +DE + C +N C NNG C C + +CLC GYR+ +++ +C DI+EC + C+ C N G YKCEC EG+ M C ++G +L ++ ++ +R++ L R Y + KN + +D + S I+W+ + + T++ ++I +P G+A DWIHG ++W+D F+ ISV N RKTL + +K R IVV P ++WTDWG KIE G++G DR L+ D + PNG+ LD LYWVD+K +S ++ RR V+S HL AH F + +FED ++ +D +NE I + TG+ + V+ P + L+H L QP EN C +H C YLCLP KF C CPD +L D + C
Sbjct: 26 KCDRNEFQCGDGKCIPYKWICDGSAECKDGSDESSETCRALTCGADQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTRKVCADDQFTCRSG--KCISLDFVCDQDQDCDDGSDESYCPAPTCNPAM---------FQCKDKGICIPKLWACDGDRDCEDGSDEDHCEGREP-----------IKTDKPCAPLEFHCGSGE---CIHMSWKCDAGYDCKHK-SDDKDCVKPTCRPDQ-FQCND-GTCIHGSRQCDREYDCKDLSDEEGCVNVTK----CQGPDVFKC-RSGECITMDKVCHKKRDCRDWTDE----PIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRL--VDQKRCEDINECENPNTCTQICINLHGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNV------VALDMEIASNKIYWSDL--TQRKIYSASMDKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLF-TDDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSCIDITGENRRTVLSDETHL-AHPFGLTIFEDLVFWTDIENEAIFSAKRLTGENIMKVAEHLLSPEDIVLYHNLRQP-KAENWCESHHLGNGGCGYLCLPAPHVNARSPKFTCACPDGMHLGTDMRNC 709 HSP 2 Score: 60.8474 bits (146), Expect = 6.414e-8 Identity = 66/219 (30.14%), Postives = 84/219 (38.36%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGK----------------------------------------CIPETLHCDGHDNCGDNSDE-ICDHRE-----------TFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSE 615
K C QF C++GK CIP+ CDG +C D SDE C+ RE F C I + CD DC + D K CVK C DQF C CI + C+ DC D SDE E C +N V +C F+C + + CI+ C K DC D +DE K C ++E
Sbjct: 107 KVCADDQFTCRSGKCISLDFVCDQDQDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDCEDGSDEDHCEGREPIKTDKPCAPLEFHCGSGECIHMSWKCDAGYDCKHKSDDKDCVKPTCRPDQFQCNDG--TCIHGSRQCDREYDCKDLSDE--EGC--VN---VTKCQGPDVFKCRSGE-CITMDKVCHKKRDCRDWTDEPIKECGENE 315
BLAST of low-density lipoprotein receptor-like vs. UniProt/SwissProt
Match: sp|P01130|LDLR_HUMAN (Low-density lipoprotein receptor OS=Homo sapiens OX=9606 GN=LDLR PE=1 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 5.421e-111 Identity = 256/759 (33.73%), Postives = 369/759 (48.62%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNI----ENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRV 2340
RC R +F CQ+GKCI CDG C D SDE + + TC + I + CDG+ DCDN D + C CS D+F C CIS+ +C+ + DC DGSDE+ +C ++ P QC++S CI +++ CD DC D SDE + + L S+ C EF+C +G CI WRCDG DC + DE NC+ C PD+ +C +C ++CD DC D SDE C N + C+ N+FKC + CI +VC+ DC D SDE + C N C NNG C C + +CLC G+++ + + +C DIDEC D CS C N G YKC+C EGF + K C AVG +L ++ ++ +R++ L R Y ++ + +N + +D + S I+W+ + ++ L G T++ I +P GLA DWIH ++W+D +SV + RKTL R N SK R+IVV P + ++WTDWG KI+ G++G D L+ + + PNG+ LD LYWVD+K IS ++ R+ ++ AH F + VFED ++ +D NE I ++ TG L++ P + LFH L QP + N CQYLCLP + KF C CPD L D ++C T++E T S+ LK + V
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG--KCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCNSST---------CIPQLWACDNDPDCEDGSDEW--------PQRCRGLYVFQGDSSPCSAFEFHCLSGE---CIHSSWRCDGGPDCKDK-SDEENCAVATCRPDE-FQCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNVTL----CEGPNKFKC-HSGECITLDKVCNMARDCRDWSDE----PIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNV------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL-TEAEAAVATQETSTVRLKVSSTAV 736
BLAST of low-density lipoprotein receptor-like vs. TrEMBL
Match: A0A1S6KMH2 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 1675.6 bits (4338), Expect = 0.000e+0 Identity = 859/860 (99.88%), Postives = 860/860 (100.00%), Query Frame = 1
Query: 55 MKYXXXXXXXXXXXXXXXXQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLIPQNQSDGGLQMVATN 2634
MKYLLISCLVISIVCVVSSQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICV+NKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTISVSSSSLKPKQSRVNVYLIVGLVITIVLLISLVLVGLGIAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLIPQNQSDGGLQMVATN
Sbjct: 1 MKYLLISCLVISIVCVVSSQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVQNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTISVSSSSLKPKQSRVNVYLIVGLVITIVLLISLVLVGLGIAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLIPQNQSDGGLQMVATN 860
BLAST of low-density lipoprotein receptor-like vs. TrEMBL
Match: W5MM69 (Low density lipoprotein receptor OS=Lepisosteus oculatus OX=7918 GN=LDLR PE=4 SV=1) HSP 1 Score: 402.519 bits (1033), Expect = 7.371e-122 Identity = 260/741 (35.09%), Postives = 377/741 (50.88%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN-KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLV--RLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILV--SSPKPMGVKLFHQLAQPVNIENAC-----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSE 2280
C F C N KCI CDG D+CGD SDE+ TC S L CDGK DC+N D + C +C+ D+F CR NC+S + +C+ +DC DGSDE+ +C P QC+NS+ C+ R++ CDG +DC+D SDE + + C EF CG G CI WRCDGS DCP+ + DE NC CSPD+ +C +C ++CD DC D SDE CSN ++ C+ ++F+C ++ CI +VCD+ DC D SDE + CD N C INNG C C + +CLC G+ + +++ +C DIDECA+ CS C N GSYKCEC EG+ + K C A+G +L ++ ++ +R++ L R Y ++ KN + +D + S I+W+ + + + H+ + T++ S I +P G+A DWIHG ++W+D F ISV RKTL+ RL ++ R+IVV P + ++WTDWG KIE G++G DR L+ + + PNG+ LD LYWVD+K +S +++ RR+V+ AH F + VFE+ ++ +D +N I+ ++ TG + V + P + L+H L QP EN C N C+YLCLP + K+ C CPD L D + C P SE
Sbjct: 32 CSAGLFQCANEKCITTRWVCDGTDDCGDGSDEVTSVCMAKTCKPSEFSCGGRLNQCVPSGWRCDGKKDCENGADEESCAPRECADDEFRCRNG--NCVSVSFVCDEEDDCEDGSDEA--SCPAPTCGPASFQCNNSV---------CVPRLWACDGDADCADGSDE-------GPAACGGQAGPAPPHAARCSPLEFQCGGGQ---CIHSSWRCDGSNDCPD-HSDEDNCIKPTCSPDE-FQCSD-GACIHGSRQCDKEYDCKDLSDELGCSNVTK----CEGPSKFRC-RSGECIGVDKVCDRQRDCRDWSDE----PVKECDNNECLINNGGCSHTCNDLKIGFECLCPEGFHL--VDKKRCEDIDECANPDTCSQICVNLEGSYKCECEEGYQIDPVTKSCKAIGTVAYLFFTNRHEVRKMTLDRSEYTRLIPRLKNV------VALDMEIPSNKIYWSDL--SQKKIYSTHMDKAGNSSHHSTVIESGIEAPEGIAVDWIHGNIYWTDSVFGTISVATTDGHRRKTLISERL---ARPRAIVVDPVHNFMYWTDWGTPAKIEKGGLNGVDRVPLVTENIEWPNGITLDLLNQRLYWVDSKLHSLSSIDVRGGNRREVIMDEEKLAHPFSLTVFEEKVFWTDIENSAILSANRLTGGDIVAVVENVALPEDIVLYHNLKQPTG-ENWCESGKLPNGGCEYLCLPAPQINRHSAKYTCACPDHLTLGPDMRKCVPVSSE 723 HSP 2 Score: 68.1662 bits (165), Expect = 1.072e-7 Identity = 72/243 (29.63%), Postives = 97/243 (39.92%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADC--DNDEDPKICVKNKCSIDQFMCRTKPM-------NCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL--NCSNFEC 801
+ C +F C+NG C+ + CD D+C D SDE T F C++S + + CDG ADC +DE P C R P+ CI + C+ +NDC D SDE + KP + FQC + CI CD + DC D SDE C + + S+ F C +G CI + CD DC + DE C N EC
Sbjct: 112 RECADDEFRCRNGNCVSVSFVCDEEDDCEDGSDEASCPAPTCGPASFQCNNSVCVPRLWACDGDADCADGSDEGPAACGGQAGPAPPHAARCSPLEFQCGGGQCIHSSWRCDGSNDCPDHSDE-----DNCIKPTC----SPDEFQCSDGA-CIHGSRQCDKEYDCKDLSDELGCSNVTKCEGPSK----------------FRCRSGE---CIGVDKVCDRQRDC-RDWSDEPVKECDNNEC 324
BLAST of low-density lipoprotein receptor-like vs. TrEMBL
Match: A0A3Q3LTV1 (Low density lipoprotein receptor a OS=Mastacembelus armatus OX=205130 PE=4 SV=1) HSP 1 Score: 394.43 bits (1012), Expect = 4.515e-119 Identity = 257/738 (34.82%), Postives = 381/738 (51.63%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI--------CDHRETFTCSD--SNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDES---PEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPT 2271
C Q C NGKCI CDG D+CGD +DE+ C E F+C+ + + T CDGKADCDN D + CV C+ +F C + C+S + +C+ DC DGSDE+ P C ++ F+C N +C+ R++ CDG +DC D SDE +NC +Q A V+Q C + EF+CG+G CI W+CDG DC + DE+NC++ C PD+ +C +C ++CD DC+D SDE C N ++ C+ + F+C ++ C++ ++VCDK DC D SDE C N C NNG C C + +CLC GY + +++ +C DIDECA CS C N +GSYKC+C EG+ + K C A+G +L ++ ++ +R++ L R Y ++ KN + +D + +K I+W+ + + + + S ++ S + +P G+A+DWIHG L+W+D + ISV RKTL R N SK RSIVV P I+WTDWG KIE G++G DR VL+ D + PNG+ LD LYWVD+K +S +++ RR +++ + AH + VFE+ ++ +D N I+ ++ TG V+ P + L+H L QP N C N C++LCL + K+ C CPD L D +TC P
Sbjct: 23 CGTDQLQCGNGKCITVRWVCDGTDDCGDGTDELPATCLAKTCRPTE-FSCTGRLNQCVPSTWRCDGKADCDNGADEESCVPRPCTHTEFRCGSG--QCVSSSFVCDDEPDCDDGSDEASCPPVTC------------SATSFRC-NNSICVPRLWACDGDADCLDGSDEWPQNC--------GTQRPATAVRQ---CSSLEFHCGSGE---CIHSNWKCDGGIDCLD-QSDEVNCAHPTCRPDE-YQCGD-GTCIHGSRQCDHQYDCSDMSDETGCVNATR----CEGPSRFRC-RSGECVSMEKVCDKRRDCRDWSDE----PLRECGSNECLYNNGGCSHICKDLKIGYECLCPAGYSL--VDQRRCEDIDECASPDTCSQICINQIGSYKCQCEEGYQVDPATKACKAIGTVAYLFFTNRHEVRKMTLDRSEYTRVIPRLKNA------VALDMNMATKEIYWSDI--SQKKIYRAPMDSAEDATHHSVVIGSDVDAPEGIAFDWIHGNLYWTDSIRSTISVTTADGSRRKTLFRH-NISKPRSIVVDPHSNFIYWTDWGNHAKIEKGGLNGGDRTVLVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIADEDKLAHPLGLTVFEERVFWTDVSNSAILSANRLTGDDIAPVAEHLSSPEDIILYHNLKQPAG-RNWCQVSNGGCEFLCLAAPQVGGHPPKYTCACPDNMMLARDMRTCVPA 706
BLAST of low-density lipoprotein receptor-like vs. TrEMBL
Match: A0A484CKQ0 (Uncharacterized protein OS=Perca flavescens OX=8167 GN=EPR50_G00153770 PE=4 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 8.038e-119 Identity = 257/731 (35.16%), Postives = 373/731 (51.03%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI--------CDHRETFTCSD--SNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPT 2271
C QF C NGKCI CDG D+CGD +DE+ C E F C+D + + T CDGKADC+N D C +C+ +F C+ C+S + +C+ DC DGSDE+ +C V C N FQC N +CI R++ CDG +DCSD SDE P + +K+ + A C + EF CG+G CI W+CDG DC + DE C+ C PD+ C +C ++C+ DC D SDE C N +Q C+ FKC +N CI+ ++VCDK DC D SDE C N C NNG C C + +CLC G+R+ +++ +C DIDECA+ CS C N +GSYKC+C EG+ + K C A+G +L ++ ++ +R++ L + Y ++ KN + +D + +K I+W+ + + + + S ++ S I +P G+A+DWIHG L+W+D + ISV+ RKTL G SK R IVV P I+WTDWG KIE G++G DR L+ D + PNG+ LD LYWVD+K +S +++ RR ++ H AH + VFED ++ +D N I+ ++ TG+ V+ P + LFH L QP + C C ++CL + K+ C+CP+ L D +TC P
Sbjct: 38 CGSSQFQCGNGKCITVRWVCDGTDDCGDGTDELPGTCMAKTCRPTE-FNCADRLNQCVPSTWRCDGKADCENGADEDSCAPKQCADTEFRCKNG--QCLSSSFVCDDEADCGDGSDEA--SCP------VASC-NPRSFQC-NNTVCIPRLWSCDGDADCSDGSDEW--PQNCGTKTPDSAAAHQ------CSSLEFRCGSGE---CIHGSWKCDGGADCLD-QSDEAECARSTCRPDE-FECGD-GTCIHGSRQCNHQYDCRDMSDEAGCVNATQ----CEGPTRFKC-RNGECISMEKVCDKHRDCSDWSDE----PLRECGSNECLYNNGGCSHICNDLRIGYECLCPTGFRL--VDKKRCEDIDECANPDTCSQICINLIGSYKCQCEEGYQVDPATKACKAIGTIAYLFFTNRHEVRKMTLDKSEYTRVIPRLKNV------VALDMNMAAKEIYWSDI--SQKKIYRAQMDSAEDTAHHSVVIGSGIDAPEGIAFDWIHGNLYWTDSIRSSISVVTADGSRRKTLFHQG-LSKPRGIVVDPHSNFIYWTDWGNPAKIEKAGLNGGDRTALVTDNIVWPNGITLDLVNQRLYWVDSKLHTLSSIDVQGSGRRTIIIDEHRLAHPLGLTVFEDKVFWTDVSNNAILSANRLTGEDITPVAEHLTSPEDIVLFHNLKQPAG-RDWCKVSGCAFMCLAAPQVGRHSPKYTCVCPNNMMLDRDMRTCVPA 720 HSP 2 Score: 73.1738 bits (178), Expect = 2.868e-9 Identity = 50/127 (39.37%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 664 TICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL--NCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
T C +++F CG G CI W CDG+ DC + DEL C C P + N ++ C + RCDG DC + +DE+ C+ P Q + EF+C KN C++ VCD DCGDGSDE
Sbjct: 36 TTCGSSQFQCGNGK---CITVRWVCDGTDDCGDG-TDELPGTCMAKTCRPTEFNCADRLNQCVPSTWRCDGKADCENGADEDSCA-PKQCADT-----EFRC-KNGQCLSSSFVCDDEADCGDGSDE 151 HSP 3 Score: 71.633 bits (174), Expect = 7.970e-9 Identity = 68/244 (27.87%), Postives = 103/244 (42.21%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI------CDHRETFTCSDSNIILKTELCDGKADCDNDED----------PKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL-NCSNFEC 801
K+C +F C+NG+C+ + CD +CGD SDE C+ R +F C+++ I + CDG ADC + D P ++CS +F C + CI + C+ DC D SDE+ E +P +C + CI C+ + DC D SDE C ++ + ++ F C G CI+ E CD DC + + L C + EC
Sbjct: 118 KQCADTEFRCKNGQCLSSSFVCDDEADCGDGSDEASCPVASCNPR-SFQCNNTVCIPRLWSCDGDADCSDGSDEWPQNCGTKTPDSAAAHQCSSLEFRCGSG--ECIHGSWKCDGGADCLDQSDEA-ECARSTCRPDEFECGDGT---------CIHGSRQCNHQYDCRDMSDEAGCVNATQCEGPTR----------------FKCRNGE---CISMEKVCDKHRDCSDWSDEPLRECGSNEC 329
BLAST of low-density lipoprotein receptor-like vs. TrEMBL
Match: A0A2I4B9F9 (low-density lipoprotein receptor OS=Austrofundulus limnaeus OX=52670 GN=ldlr PE=4 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 8.894e-119 Identity = 262/755 (34.70%), Postives = 383/755 (50.73%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI--------CDHRETFTCSD--SNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV--SHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENACI-NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRV 2340
C QF C GKCI CDG D+CGD +DE+ C + F+C+D +N + + CDGKADC+N D + C +C+ +F C+ CIS T +C+ + DC DGSDE ++ P V C +S FQC N +CI R++ CDG DC D SDE SEN K ++++ + C + EF C +G CI W+CDG DC + DE +C+ C PD+ C +C ++C+ Y DC D SDE C N S CD FKC ++ CI+ ++VCD DC D SDE C N C+ NNG C C + KCLC GY + ++ +C DIDECA+ CS C N +GSYKCEC EG+ + K C A+G +L ++ ++ +R++ L + Y ++ KN + +D + +K IFW+ + L + ++ + I +P G+A+DWIHG L+W+D ISV+ RKTL N SK R++VV P I+WTDWG KIE G++G DR L+ D + PNG+ LD LYWVD+K +S +++ R ++ H AH + VFE+ ++ +D N I+ ++ TG+ V+ P + L+H L QP + + N +C+++CLP K+ C+CPD L D +TC P +SS+ P QS V
Sbjct: 25 CESSQFQCGTGKCITMRWVCDGMDDCGDGTDELPSVCLVKTCKPTD-FSCADRHNNCVPSSWRCDGKADCENGADEENCAPRQCTNSEFRCKNG--QCISSTFVCDQDTDCYDGSDE-------LSCP-AVTCKSS-SFQC-NNTVCIPRLWACDGDRDCLDGSDEW----SENCKQQART----TPAAPQCSSREFQCASGE---CIHSTWKCDGENDCLD-RSDEADCARVTCRPDE-FECGD-GTCIHGSRQCNSYYDCKDMSDELGCVNVSH----CDGPTRFKC-RSGECISMEKVCDNKRDCRDWSDE----PLRECGSNECQYNNGGCSHICNDLKIGYKCLCPTGYSL--VDNKRCEDIDECANPETCSQICINQMGSYKCECEEGYQVDPATKACKAIGTIAYLFFTNRHEVRKMTLDKSEYTRVIPRLKNV------VALDMNMATKEIFWSDISQKKIYRTLMDLAEDASHH--HVVIDNDIDAPEGIAFDWIHGHLYWTDSIRRTISVVTADGSRRKTLFH-QNLSKPRAVVVDPHSNFIYWTDWGNPAKIEKGGLNGVDRTALVIDNIVWPNGITLDILSQRLYWVDSKLHTLSSIDVQGDSRHTLIIDEHQLAHPLGLTVFEERVFWTDVSNNAILSANRLTGEDVAPVAEHLSSPEDIILYHNLKQPAGRDWCQVSNSSCEFMCLPAPQVGRRPPKYTCVCPDNMMLARDMRTCVPAVPTTAVPIEPETSSTRPPHQSPV 732 HSP 2 Score: 69.707 bits (169), Expect = 3.309e-8 Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 649 LVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELN--CSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDE 1038
L T C++++F CG G CI W CDG DC + DEL C C P + ++C + RCDG DC + +DEE C+ P Q S EF+C KN CI+ VCD+ DC DGSDE
Sbjct: 18 LTNALTACESSQFQCGTGK---CITMRWVCDGMDDCGDG-TDELPSVCLVKTCKPTDFSCADRHNNCVPSSWRCDGKADCENGADEENCA-PRQCTNS-----EFRC-KNGQCISSTFVCDQDTDCYDGSDE 138 HSP 3 Score: 65.4698 bits (158), Expect = 5.893e-7 Identity = 67/243 (27.57%), Postives = 101/243 (41.56%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE-----ICDHRETFTCSDSNIILKTELCDGKADC--DNDEDPKIC--------VKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL-NCSNFEC 801
++C +F C+NG+CI T CD +C D SDE + +F C+++ I + CDG DC +DE + C +CS +F C + CI T C+ NDC D SDE+ + + +P +C + CI C+ DC D SDE C + + ++ F C +G CI+ E CD DC + + L C + EC
Sbjct: 105 RQCTNSEFRCKNGQCISSTFVCDQDTDCYDGSDELSCPAVTCKSSSFQCNNTVCIPRLWACDGDRDCLDGSDEWSENCKQQARTTPAAPQCSSREFQCASG--ECIHSTWKCDGENDCLDRSDEA-DCARVTCRPDEFECGDGT---------CIHGSRQCNSYYDCKDMSDELGCVNVSHCDGPTR----------------FKCRSGE---CISMEKVCDNKRDCRDWSDEPLRECGSNEC 316
BLAST of low-density lipoprotein receptor-like vs. Ensembl Cavefish
Match: vldlr (very low density lipoprotein receptor [Source:NCBI gene;Acc:103023739]) HSP 1 Score: 369.777 bits (948), Expect = 3.383e-113 Identity = 266/835 (31.86%), Postives = 400/835 (47.90%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTC---------SDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
K C F+C+NG+CIP+ HCDG +C D SDE + T TC + I CDG++DCDN ED C C++ +F C + CIS+ +CN +DC DGSDE +P +C FQC N CI + CD DC D SDE N ++ C +E CG+G CI ++WRCDG DC + DE NC C PD+ +C+ SC ++C+G DCTD +DE C N +Q C+ ++FKC ++ CI +VC+K DC D SDE + C+ N C +NNG C C + +C C PG ++ I+ C DI+EC + +CS C N G YKCEC G+ M C AVG E L+++ + IR+L L R Y ++ +N + +D D+ + IFW + G K V + PVG+A DWI+ ++WSD+ I V N NG ++ ++ N + SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L RR V+ + AH F + VFED ++ +D ++E I +K TG ++++ +P + ++H+L Q ++ N C N C Y+CLP ++ K+ C+CP L +DG C P IS S +K + + + +L+ + G M+RN+ + K++ NF+NP Y + +L I + + Y +
Sbjct: 65 KMCAETDFVCRNGQCIPKRWHCDGEPDCEDGSDEGTEQCYTRTCRMNEFSCGVGSTPCIPVFWKCDGESDCDNGEDEMNCGNVTCALLEFTCTSG--RCISQNFVCNGEDDCGDGSDEQDCAPSSC------------GPNEFQCGNAT-CIPSGWVCDDDPDCQDHSDESPLRCGRNPTPPAK-----------CSVSEILCGSGE---CIHRKWRCDGDADCKDG-SDEKNCPARSCRPDQ-FKCED-GSCIHGSRQCNGIRDCTDGTDEVNCKNLTQ----CNGPDKFKC-RSGECIDMHKVCNKARDCPDWSDE----PIKECNLNECLLNNGGCSHICRDMVIGYECDCTPGLQL--IDRKTCGDINECLNPGICSQICINLKGGYKCECHSGYLMDAATGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNT------VALDADFTQQRIFWADLGQKAIFSTVLDKREDVGYTK----VIDNVQMPVGIAVDWIYKNIYWSDLGSKTIVVANF-NGTKQKVLFDRNLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHTLCSVDLNGDNRRKVLQSQDYLAHPFALTVFEDRVFWTDGESEAIYGANKFTGSDVTMLANNLNEPQDIIVYHELIQ-LSGTNWCNEKVNNGGCSYMCLPAPQINKHSPKYTCVCPVGQELSSDGLRCRP------EGNISTSIHEVKSAKGSAAAW------AVLPVLLLAMAAAGGYLMWRNWQLKN-KKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAI 831
BLAST of low-density lipoprotein receptor-like vs. Ensembl Cavefish
Match: vldlr (very low density lipoprotein receptor [Source:NCBI gene;Acc:103023739]) HSP 1 Score: 370.163 bits (949), Expect = 3.796e-113 Identity = 267/844 (31.64%), Postives = 402/844 (47.63%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTC---------SDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKS-EFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXA--------MYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
K C F+C+NG+CIP+ HCDG +C D SDE + T TC + I CDG++DCDN ED C C++ +F C + CIS+ +CN +DC DGSDE +P +C FQC N CI + CD DC D SDE N ++ C +E CG+G CI ++WRCDG DC + DE NC C PD+ +C+ SC ++C+G DCTD +DE C N +Q C+ ++FKC ++ CI +VC+K DC D SDE + C+ N C +NNG C C + +C C PG ++ I+ C DI+EC + +CS C N G YKCEC G+ M C AVG E L+++ + IR+L L R Y ++ +N + +D D+ + IFW + G K V + PVG+A DWI+ ++WSD+ I V N NG ++ ++ N + SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L RR V+ + AH F + VFED ++ +D ++E I +K TG ++++ +P + ++H+L Q ++ N C N C Y+CLP ++ K+ C+CP L +DG C P S + + S P++ ++ + VL L +A M+RN+ + K++ NF+NP Y + +L I + + Y +
Sbjct: 65 KMCAETDFVCRNGQCIPKRWHCDGEPDCEDGSDEGTEQCYTRTCRMNEFSCGVGSTPCIPVFWKCDGESDCDNGEDEMNCGNVTCALLEFTCTSG--RCISQNFVCNGEDDCGDGSDEQDCAPSSC------------GPNEFQCGNA-TCIPSGWVCDDDPDCQDHSDESPLRCGRNPTPPAK-----------CSVSEILCGSGE---CIHRKWRCDGDADCKDG-SDEKNCPARSCRPDQ-FKCED-GSCIHGSRQCNGIRDCTDGTDEVNCKNLTQ----CNGPDKFKC-RSGECIDMHKVCNKARDCPDWSDE----PIKECNLNECLLNNGGCSHICRDMVIGYECDCTPGLQL--IDRKTCGDINECLNPGICSQICINLKGGYKCECHSGYLMDAATGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNT------VALDADFTQQRIFWADLGQKAIFSTVLDKREDVGYTK----VIDNVQMPVGIAVDWIYKNIYWSDLGSKTIVVANF-NGTKQKVLFDRNLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHTLCSVDLNGDNRRKVLQSQDYLAHPFALTVFEDRVFWTDGESEAIYGANKFTGSDVTMLANNLNEPQDIIVYHELIQ-LSGTNWCNEKVNNGGCSYMCLPAPQINKHSPKYTCVCPVGQELSSDGLRCRPVASTDAPQDEGRTLIHSTHPQEGNISTSIHEVKSAKGSAAAWAVLPVLLLAMAAAGGYLMWRNWQLKN-KKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAI 852
BLAST of low-density lipoprotein receptor-like vs. Ensembl Cavefish
Match: ldlra (low density lipoprotein receptor [Source:NCBI gene;Acc:103022705]) HSP 1 Score: 370.163 bits (949), Expect = 5.562e-113 Identity = 255/734 (34.74%), Postives = 362/734 (49.32%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRD-VVSHLN-AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPT 2271
C F C NGKCI CDG D+CGD +DE+ T TC S L CD ADC+N D C C +F C + C+S+ +C+ DC DGSDE+ + L C +S F C N CI R++ CDG +DC D SDE +NC +QS ++S C EF+CG+G CI WRCDG DC + DE NC+ C PD+ RC SC ++C+ DC D SDE C N S C+ + FKC + CI+ ++VC+K DC D SDE CD N C NNG C C + +CLC G+R+ +++ +C DIDECA+ CS C N +GSYKCEC EG+ + K C A+G +L ++ ++ +R++ L R Y ++ KN + +D + +K IFW + + + + S + + ++ S + +P G+A DWIHG ++W+D ISV RKTL + + +K R+IVV P ++WTDWG KIE G++G DR L+ D + PNG+ LD LYWVD+K +S +++ RR +V H AH + VFE+ ++ +D N I+ ++ TG K+ P + LFH L QP N C N C++LCL K+ C CPD L + C P
Sbjct: 24 CGIRDFQCGNGKCIILRWMCDGADDCGDGTDELPSACLTRTCRTSEFSCGGRLNQCIPNSWKCDSHADCENGADEVGCGTKHCLSGEFRCASG--QCVSRAFVCDEEADCQDGSDEA--------QCLPTTCSSS-SFHCNNSA-CIPRLWACDGDTDCGDGSDEWPQNC--------GAQSTVP-PERSRHCAVQEFHCGSGE---CIHNSWRCDGDPDCLD-RSDEKNCTVSTCQPDE-FRCGD-GSCIHGSRQCNQVYDCKDMSDELGCVNASH----CEAPSRFKC-HSGECISMEQVCNKQRDCRDWSDE----PLRECDSNECMYNNGGCSHVCNDLKIGYECLCPSGFRL--VDKKRCEDIDECANPDTCSQICINQVGSYKCECEEGYQIDPATKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRVISRLKNA------VALDMNIATKEIFWCDL--SLKKIYRASMDSAADSSQHNIVIGSGVDAPEGIAVDWIHGNIYWTDSIRGTISVATADGRKRKTLFK-KDLAKPRAIVVDPLKNFVYWTDWGTPAKIERGGLNGVDRSALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGSRRTLIVDHGRLAHPLSLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAEHLSSPEDIVLFHNLKQP-RATNWCTFANGGCEFLCLAAPQVNRFSPKYTCACPDNMMLDTTMRKCVPA 709 HSP 2 Score: 51.6026 bits (122), Expect = 5.045e-6 Identity = 41/123 (33.33%), Postives = 57/123 (46.34%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICV-KNKC-SIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACE 465
+ C +F C +G+CI + CDG +C D SDE C E F C D + I + C+ DC + D CV + C + +F C + CIS +CN DC D SDE C+
Sbjct: 193 RHCAVQEFHCGSGECIHNSWRCDGDPDCLDRSDEKNCTVSTCQPDE-FRCGDGSCIHGSRQCNQVYDCKDMSDELGCVNASHCEAPSRFKCHSG--ECISMEQVCNKQRDCRDWSDEPLRECD 312
BLAST of low-density lipoprotein receptor-like vs. Ensembl Cavefish
Match: ldlra (low density lipoprotein receptor [Source:NCBI gene;Acc:103022705]) HSP 1 Score: 369.777 bits (948), Expect = 8.595e-113 Identity = 255/734 (34.74%), Postives = 362/734 (49.32%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTEL---------CDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE--KNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRD-VVSHLN-AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPT 2271
C F C NGKCI CDG D+CGD +DE+ T TC S L CD ADC+N D C C +F C + C+S+ +C+ DC DGSDE+ + L C +S F C N CI R++ CDG +DC D SDE +NC +QS ++S C EF+CG+G CI WRCDG DC + DE NC+ C PD+ RC SC ++C+ DC D SDE C N S C+ + FKC + CI+ ++VC+K DC D SDE CD N C NNG C C + +CLC G+R+ +++ +C DIDECA+ CS C N +GSYKCEC EG+ + K C A+G +L ++ ++ +R++ L R Y ++ KN + +D + +K IFW + + + + S + + ++ S + +P G+A DWIHG ++W+D ISV RKTL + + +K R+IVV P ++WTDWG KIE G++G DR L+ D + PNG+ LD LYWVD+K +S +++ RR +V H AH + VFE+ ++ +D N I+ ++ TG K+ P + LFH L QP N C N C++LCL K+ C CPD L + C P
Sbjct: 35 CGIRDFQCGNGKCIILRWMCDGADDCGDGTDELPSACLTRTCRTSEFSCGGRLNQCIPNSWKCDSHADCENGADEVGCGTKHCLSGEFRCASG--QCVSRAFVCDEEADCQDGSDEA--------QCLPTTCSSS-SFHCNNSA-CIPRLWACDGDTDCGDGSDEWPQNC--------GAQSTVP-PERSRHCAVQEFHCGSGE---CIHNSWRCDGDPDCLD-RSDEKNCTVSTCQPDE-FRCGD-GSCIHGSRQCNQVYDCKDMSDELGCVNASH----CEAPSRFKC-HSGECISMEQVCNKQRDCRDWSDE----PLRECDSNECMYNNGGCSHVCNDLKIGYECLCPSGFRL--VDKKRCEDIDECANPDTCSQICINQVGSYKCECEEGYQIDPATKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRVISRLKNA------VALDMNIATKEIFWCDL--SLKKIYRASMDSAADSSQHNIVIGSGVDAPEGIAVDWIHGNIYWTDSIRGTISVATADGRKRKTLFK-KDLAKPRAIVVDPLKNFVYWTDWGTPAKIERGGLNGVDRSALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGSRRTLIVDHGRLAHPLSLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAEHLSSPEDIVLFHNLKQP-RATNWCTFANGGCEFLCLAAPQVNRFSPKYTCACPDNMMLDTTMRKCVPA 720 HSP 2 Score: 60.8474 bits (146), Expect = 6.102e-9 Identity = 67/245 (27.35%), Postives = 100/245 (40.82%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDN--DEDPKICVKNK---------CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDEL-NCSNFEC 801
K C +F C +G+C+ CD +C D SDE C +F C++S I + CDG DC + DE P+ C C++ +F C + CI + C+ + DC D SDE K V F+C + CI C+ DC D SDE C ++ + ++ S+ F C +G CI+ E C+ DC + + L C + EC
Sbjct: 115 KHCLSGEFRCASGQCVSRAFVCDEEADCQDGSDEAQCLPTTCS-SSSFHCNNSACIPRLWACDGDTDCGDGSDEWPQNCGAQSTVPPERSRHCAVQEFHCGSG--ECIHNSWRCDGDPDCLDRSDE---------KNCTVSTCQPDEFRCGDGS-CIHGSRQCNQVYDCKDMSDELGCVNASHCEAPSR----------------FKCHSGE---CISMEQVCNKQRDCRDWSDEPLRECDSNEC 327
BLAST of low-density lipoprotein receptor-like vs. Ensembl Cavefish
Match: vldlr (very low density lipoprotein receptor [Source:NCBI gene;Acc:103023739]) HSP 1 Score: 367.851 bits (943), Expect = 4.185e-112 Identity = 268/860 (31.16%), Postives = 406/860 (47.21%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTC---------SDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKS---------EFFRKTIXXXXXXLKPKQS----------RVNVYXXXXXXXXXXXXXXXXXXXXXXA------MYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
K C F+C+NG+CIP+ HCDG +C D SDE + T TC + I CDG++DCDN ED C C++ +F C + CIS+ +CN +DC DGSDE +P +C FQC N CI + CD DC D SDE N ++ C +E CG+G CI ++WRCDG DC + DE NC C PD+ +C+ SC ++C+G DCTD +DE C N +Q C+ ++FKC ++ CI +VC+K DC D SDE + C+ N C +NNG C C + +C C PG ++ I+ C DI+EC + +CS C N G YKCEC G+ M C AVG E L+++ + IR+L L R Y ++ +N + +D D+ + IFW + G K V + PVG+A DWI+ ++WSD+ I V N NG ++ ++ N + SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L RR V+ + AH F + VFED ++ +D ++E I +K TG ++++ +P + ++H+L Q ++ N C N C Y+CLP ++ K+ C+CP L +DG C P S T ++ KPK + +++ + + L ++ L +A M+RN+ + K++ NF+NP Y + +L I + + Y +
Sbjct: 65 KMCAETDFVCRNGQCIPKRWHCDGEPDCEDGSDEGTEQCYTRTCRMNEFSCGVGSTPCIPVFWKCDGESDCDNGEDEMNCGNVTCALLEFTCTSG--RCISQNFVCNGEDDCGDGSDEQDCAPSSC------------GPNEFQCGNA-TCIPSGWVCDDDPDCQDHSDESPLRCGRNPTPPAK-----------CSVSEILCGSGE---CIHRKWRCDGDADCKDG-SDEKNCPARSCRPDQ-FKCED-GSCIHGSRQCNGIRDCTDGTDEVNCKNLTQ----CNGPDKFKC-RSGECIDMHKVCNKARDCPDWSDE----PIKECNLNECLLNNGGCSHICRDMVIGYECDCTPGLQL--IDRKTCGDINECLNPGICSQICINLKGGYKCECHSGYLMDAATGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNT------VALDADFTQQRIFWADLGQKAIFSTVLDKREDVGYTK----VIDNVQMPVGIAVDWIYKNIYWSDLGSKTIVVANF-NGTKQKVLFDRNLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHTLCSVDLNGDNRRKVLQSQDYLAHPFALTVFEDRVFWTDGESEAIYGANKFTGSDVTMLANNLNEPQDIIVYHELIQ-LSGTNWCNEKVNNGGCSYMCLPAPQINKHSPKYTCVCPVGQELSSDGLRCRPVASTDAPQDEGRTLIHSTHPQVRTTTKPKVAPQAKLVEGNISTSIHEVKSAKGSAAAWAVLPVLLLAMAAAGGYLMWRNWQLKN-KKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAI 868
BLAST of low-density lipoprotein receptor-like vs. Ensembl Sea Lamprey
Match: lrp2a (low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]) HSP 1 Score: 328.561 bits (841), Expect = 2.786e-94 Identity = 232/766 (30.29%), Postives = 351/766 (45.82%), Query Frame = 1
Query: 142 FLCQNGKCIPETLHCDGHDNCGDNSDE---------------ICDHR------------------ETFTCSDSN-IILKTELCDGKADCDNDEDPKIC-VKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETK-CIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLA--VGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLP-----IGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPV--GLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPK--YRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSH--LNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTG--KQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFF 2286
F C NG+C+P CDG+D+C D SDE C +R + FTC+ N I + +CD DC + D + C + C QF C CI +C+ ++DC DG+DE + V C S F C + CI+ Y CDG DC D+SDE CP + +C N+EF C + CI W CDG DC + + C C+ RC +C RCDG DC D +DE C P C +++ C + C+ ++VCD DC DG DE P +C+++ C +NNG C C+ +C C PG+++ +++TK C D+DEC CS +C N GS++C C G+ M D + C A E LL +++ I Y D + + N S+ + + +DFD ++ I+W V D + S N R LV+ ++ V LA DWI L+W D I V + +G +T++ N + R +V+ P+ R +FWTDWGK P+IE GMDG+ R+ ++ L+ PNGLA+DY + LY+ DA I + RR V++ + H I +FED++Y +D ++++ +K G + ++ + +PMG+ H + QP N C+ +C +LCL + + + C CP L DG+TC F
Sbjct: 1008 FACANGRCVPRLFLCDGYDDCHDGSDERGCGTGNVTCSPYAFTCTNRRCIPIDWRPTRLATTCRADQFTCASGNRCIPRYWICDTDNDCGDGSDERGCDMSGTCHPMQFQCPDH--RCIDNAYVCDGDSDCVDGADE---------RGCVFNC-TSYQFSCSSGDQCIATYYRCDGAFDCRDRSDEVGCP---------------TRAPGLCHNDEFQCQSDGL--CIPAGWECDGHPDCDDGSDEHPGCPPRTCAAGYL-RCDN-GNCVPESWRCDGDNDCRDGTDERDCPTPPYR---CQSPSQWLCPNHRACVDLRKVCDGNFDCPDGGDESP-----HCNEHDCSVNNGGCSHGCVQGPFGAQCTCPPGFQL--LDDTKNCADVDECDPPGSCSQQCVNEHGSFRCHCDLGYTMESDRRTCKANDRHEVLLLVPSRSQI--------YSDNITATPNVLSSVVRNGRSIVAVDFDARAGRIYWAD-------VAEDKIWSALRNGTDRQLVHKQVGLTVTENLAVDWIGKNLYWLDFVLETIEVSRL-DGSHRTVLISTNVTNPRGLVLDPRDGSRTMFWTDWGKNPRIERAGMDGRLRRTIVSSKLYWPNGLAIDYATNLLYFADAYLDFIDFCDFNGQNRRQVLASDLILQHPHAITIFEDFVYWTDRSTNRVMRANKWHGGNQSTMIYNLQQPMGLVASHSVRQPT-ATNPCLGQSCSHLCLLSPITP---FFYSCACPSGWNLGPDGRTCQKEDRPFL 1712 HSP 2 Score: 277.33 bits (708), Expect = 2.232e-77 Identity = 235/845 (27.81%), Postives = 369/845 (43.67%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI--------CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKC-SIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEAC-EIINKPLVVQCDNS----------------------------IH-------FQCENKQLCISRIYYCDGKSDCSDQSDE-KNCPDSENSKSKSQSLAD---LVKQSTIC-----------QNNEFYCGAGSTVP--------------CIAKEWRCDGSYDCPETYKDELNCSNFECSPDK-----------PNRCKTIDSCYD-NDQR-------------------------CDGYPDCTDNSDEE--FCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGN-CEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADH-MVCSHKCANYLGSYKCECFEGFYMSKDNKQCL--AVGEKFLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHL-VSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRL---GNHS----KVRSIVVHPKYRRI-FWTDWGKEPKIECMGMDGQDRK-VLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVS--SPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKT 2259
++C QF C NG+CIP CD DNC D SDE+ C+ + FTC + + CD DC + D + C C +F C CI+++ +CN N+C D + + C E +P +++C + +H F+C N Q CI + CD + DC+D +DE +C D + +Q D + S IC ++ CGA + P CI + + CDG DC + + NC+ C+ + RC + C D +D+R CDG DC D SDE+ C PS +C P F+C C+A VC++ NDC DGSDE+ C N C + N C C N + C C G+R+ + N C DIDEC + VCS C N GSY C+C G+ + + C + E +L++S + +R + + R Y +L + N + +DFD + ++W + I+ + +++TG T++ + +P GLA DW+ ++W+D + ++V + RK L+ NH+ R + +HP++ R+ +WTDWG P I +GMDG++ K V+I L PNGL +DY D ++W DA I NL R ++ H F + VFED ++ +DW+ I HK TG+ + +++ + +P + ++H QP + N C N C +LCL + F+C CPD ++ G T
Sbjct: 2659 QQCGTSQFTCLNGRCIPFRNKCDNRDNCRDGSDELERVCAFHTCEPTD-FTCRNGRCVRYGYRCDHTNDCGDSSDEEGCAFRTCDPAAEFACTNG--RCIARSQVCNGVNNCRDNATSDEQRCPERTCQPGLLKCLTTNICVLRHYLSGGAAEWRRNDLRRPPPLPLHTCFIANEFRCGNGQ-CIPLSWVCDSEQDCTDNADEPSSCSDPGRTCPGTQFTCDSGRCIPGSWICDGDNDCGDGSDEDGRHACGARTCGPHEFTCADASPPRRRCIQRRFVCDGDADCSDALDEHQNCTRRSCTAGEFACDNGLCVHSRYRCDRRNDCGDGSDERGCTYPTCRQNQFTCENGRCIPRIFACDGDNDCGDGSDEDTHLCHQPSP---TCAP-GFFRCGAGE-CVAIHLVCNQANDCADGSDEK------GCGINECLYASINQCAHNCTNTLTSFYCSCWAGFRLMA-NGRACEDIDECNETPQVCSQLCENTAGSYFCKCAPGYVRLPNGRTCRQNSGVEPYLIFSNRYYVRNMTVGGRSYTPILQNLTN------AVALDFDRVERRLYWVDYGQR----TIERMFLNRTG---LETVMKHDLPAPEGLAIDWVGRKMYWADAVLDCLNVAELDGRYRKKLLSGCVDTNHTYCLENPRGVTLHPRFGRVLYWTDWGNTPYIARVGMDGKNNKSVVISTKLEWPNGLTIDYTTDRIFWSDAHLNYIEYANLDGSHRHTTLAGSLPHVFALTVFEDTIFWTDWNTRSIESAHKYTGEGRTMLANTTHRPFDIHVYHPYRQPPEVPNPCGSNNGGCSHLCLVAAGG----TGFQCECPDDFAAIHVGTT 3470 HSP 3 Score: 251.906 bits (642), Expect = 6.004e-69 Identity = 215/735 (29.25%), Postives = 319/735 (43.40%), Query Frame = 1
Query: 139 QFLCQ-NGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELN-CSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDE--EFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERP--GGKSENCDKNLCKINNGNCEQKCINFYSHR-KCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDN--KQCLAV-GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKN---IFWTQFEPNPEIVQIDHLV------SKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDD-LYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHK--KTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKT 2259
+F C+ N +CIP C+G D+C DNSDE CD + C + I CD DC + D + C CS +F C + CI +CNH NDC D SDE CE+ Q +FQC + CI CDG +DC D SDE CP T C + F C CI W+CDG DC + +EL+ C + C+P RC + C + + C+ DC D SDE + C P+ + EFKC CI VC+ N+C D +DE G+ C + +C EQ C N + C C+PG+ ++ N C D++EC C C N G+Y+C C +G+ + + K+C+A LL + K +R+ L S + + + D+D+ +++T + I S L I P G+A DW+ ++W+D + I V + RK L+ K +I ++PK ++WTDWG PKIE MDGQ R+ L++ L P GLA+D+ + +YW DAK I RR V+S + F +DVFE +Y + + ++ Q +K K IL + ++F + VN++N C TC +LCL + + Y C CP + + +T
Sbjct: 3648 EFACRTNYRCIPTWAVCNGMDDCRDNSDEQGCAEITCDPLGDYRCDNHRCIPLRWRCDRYDDCGDGSDERNCAPRPCSESEFRCTNQ--RCIPGRWVCNHENDCGDNSDE--RDCEL-------QTCLPGYFQCGSGH-CIPERLKCDGSADCQDFSDESLCPTR-------------YPNGTWCPPSSFEC---DNHVCIPPSWKCDGDNDCGDGSDEELHHCLDTPCNPPGRFRCDN-NRCIYSHEICNAVDDCGDGSDETPDKCKEPTFAPCT---EEEFKCASGR-CIPMAAVCNNYNECRDNTDETGCNQGQDRTCAERIC-------EQNCTNLPGNGFICSCRPGFTANAENRNNCDDVNECEVFGTCPQDCQNAKGTYECFCVDGYRSAAGSYGKRCIANDNSPVLLLADKVRVRKYDLTSQKQADYISNE---EDIQALDFDWDHDGTGLSMVYYTVLRSGGKFGSIKRAYLAAFSNSSENFATGINLGLRYISQPDGIAVDWVGRHIYWTDAQTSRIEVALLDGRYRKQLIN-SVLDKPATIALNPKLGMMYWTDWGVVPKIEMAWMDGQQRQHLVQGLLGWPTGLAVDHTNNGRIYWCDAKENVIESVRPDGGDRRTVISGDLGNPFTLDVFESNVYWTTRETGQVWQQNKFGSGVKSHILTVNSWLSQARVFQKHRYNVNVKNPC-KGTCSHLCL---LRPQGYT---CACPQNAQFIPGSET 4331 HSP 4 Score: 231.491 bits (589), Expect = 2.404e-62 Identity = 216/758 (28.50%), Postives = 325/758 (42.88%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADC-DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLA---VGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEI-VQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRR--IFWTDW---GKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSP-TKSEFFRKTIXXXXXXLKPKQ 2331
C QF C +G CIP + CD ++C D+SDE C + SD+ I + +CDG+ADC D ++ + C + CS F C + +C+ C+H DC D SDE ++C Q C N C + CDG +C D SDE NC + C EF C + C+ + +RCD DC + DE C C ++ C + C CDG DC D SDE C + + C P E+ C + CI F++VCD DC G+DE C C +CE +C + C C P + + S N C+D D+C VC C N + C+C G Y+ + K C A G LL+S + L + +L +N + +G+D+ Y + +FWT N + V +D L + T++ + P LA DWI L+ + + I V ++ R TL+ N + R I + P + IF++DW P++E MDG +R L++ L P G+ LD+ ++WVD + I R+ ++S H FDI FE ++Y +DW ++ +++ G Q + S+ +P GV + H L QP + N C N C+ +C+ + + +RC C L DG C P TK F SV L Q
Sbjct: 1 CDSGQFRCGSGACIPRSWVCDSINDCSDDSDERGCSPATCTTLQFRCRSDNRCIARAFVCDGEADCADRSDEHQNCPGSTCSSSHFTCASG--HCVQSAFRCDHFQDCDDRSDE--QSC---------QYPTCAEMTCANGA-CFNTAQRCDGVVNCRDLSDEANC-------------------TARCPVGEFQC---ANERCVPQSYRCDHIDDCTDG-SDENGCVYGTCQGNQFT-CAS-GRCILQSWVCDGDDDCFDGSDERGCVSAASEERECYP-EEWPCPGSKACIPFRKVCDGRRDCPHGTDESNSTAGLACSIENCGAL--SCEYRCHASPAGGACYCPPSFVV-SNNSITCMDFDDCKMWGVCDQFCENRPAGHMCQCSPG-YLLEYGKHCRADVTSGVASLLFSNGKDLVMSDLQGRTVRVLVPSQN---RGVAVGVDYHYILRRVFWTDTMQNKVLSVNMDTLAVE-------TVLSVALDMPENLAVDWISNKLYIVESSVDRIDVTDLNGANRLTLI-AENLGRPRGIALDPTVGKGSIFFSDWDDASGNPRLERAYMDGTNRLALVRTKLGWPAGITLDFVLQRVFWVDNRFDYIESVTYDGLIRKTILSGGANVPHPFDITTFEHYVYFTDWTRMEVTRVNVFNGSDLQVVHRSNIQPYGVIVHHSLRQP-QVRNPCGPNNGGCEQICVLSHRTDNVGLGYRCKCRVGFDLQPDGLRCFPVTKFLLFSAMTSVRGIPLNQSQ 702 HSP 5 Score: 153.68 bits (387), Expect = 6.691e-38 Identity = 121/411 (29.44%), Postives = 179/411 (43.55%), Query Frame = 1
Query: 1069 KNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDY---YFDDLYWVDAKTRKI--SVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKP--MGVKLFHQLAQPVNIENAC-----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCS 2265
+N C NNG CEQ C V SH+ N Y+C+C GF + D +C V KFLL+S S+R + L + + + P S +GIDFD S+ + + +I Q + + TG + + S + S LAYDW+ L+W+D ++V+ + + R+ + L N RSIVVHP IF++DW + KI DG ++ L PNGLA+D+ + LYWVDA +I S +N + QR D +SHL AH F I + + Y SDW I+++ K G + +++ M VK++ Q NAC N C + C P C CP L DG+ C+
Sbjct: 634 RNPCGPNNGGCEQIC-----------------------------------VLSHRTDNVGLGYRCKCRVGFDLQPDGLRCFPV-TKFLLFSAMTSVRGIPLNQSQQEDVILPVM-GSPVTFVGIDFDAASQRVIVSDTSQG-KIFQQN--LDGTGRVNLTSRDVSSVES---LAYDWVSKNLYWTDTRNRAVTVMRLIDQSRRNI--LSNLQNPRSIVVHPLQGYIFYSDWNRPAKIVRAWCDGSHATPIVNTSLGWPNGLAIDWQSPWNPKLYWVDAFFDRIEFSNFNGQNRQRLDRISHL-AHPFSISIHGGFAYFSDWRLNSIVRVQKMDGGEAVIIRQGIQYLMNVKVYDTDIQ--TGSNACNRPANPNGDCSHFCFPAPSGAR-----VCGCPYGKRLAEDGRMCA 991 HSP 6 Score: 139.428 bits (350), Expect = 1.679e-33 Identity = 105/406 (25.86%), Postives = 179/406 (44.09%), Query Frame = 1
Query: 1072 NLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNF--LPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP---KPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFS--YLLNDGKTC 2262
N C++NNG C+Q C + + S+ C C+H LGS D C+ +++L++ T++SIR +RL +S PT+ + + +DFD +++TQ + + + + T++ S + SP G+A+DWI+ +++SD I + + G R + + + R+I++ P ++WTDW KIE + G R +I L PNGL LDY + LYW DA +KI L T RR+V+ + + F + + E +Y +DW+ + + + K G ++++ +PM + + Q N C N C ++C+P +E C CP YL N GK C
Sbjct: 2306 NPCRLNNGGCQQFC--------------FALPSVTTATC----------ACAH---GELGS-------------DRVSCVMPSDEYLMFVTEDSIRSMRLDPED----HSLPIPTAQVSRVAVALDFDIADGRVYFTQ---SMGLARSRISFFSLSSPSSVTVIASDLGSPDGIAFDWINRRIYYSDYANQTIGSMGLDGGNRTVVALV---PRPRAIMLDPCKGYMYWTDWSVNAKIERATLGGNFRVPIINSSLVWPNGLTLDYSENMLYWADAYRQKIERSTL-TGDRREVIVSMAVYPFALTIHEQHVYWTDWNTKSVYRATKDDGADQVVMIQNLPYRPMDIHILTASKQQ-RCSNPCNQFNGGCSHICVPGPSGVE------CQCPAQGRWYLANGGKDC 2653 HSP 7 Score: 103.605 bits (257), Expect = 1.659e-22 Identity = 93/332 (28.01%), Postives = 143/332 (43.07%), Query Frame = 1
Query: 1255 YKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSN--FLPI-----GIDFDYK-SKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNI--TNGMRKTLVRLGNHSKVRS------IVVHPKYRRIFWTDWGKE----PKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLF--HQLAQPVNIENACI--NHTCQYLCLP 2178
Y C C G+ + D + C FL+ + I + L N TSN +PI G D D+ ++ I+W + NP + H V G + + + + +P GLA DWI L++++ I V+ + RKT++ GN+ + I + P R++WTD G + K+ MDG + VL + + + LD LYW A T I ++ R VV HL +H + + V E LY +D+D E + ++ K G +L+ S P G+K H NAC N CQ LCLP
Sbjct: 1687 YSCACPSGWNLGPDGRTCQKEDRPFLIVVRSSIIFGISL----------DPNQTSNDAMVPISGISNGYDVDFDDTQFIYWVE---NPGSI---HRVKTDGTNRTQFAPSAILGAPSGLAIDWISRNLYYTNPRSQTIEVIKMDGVQNYRKTII--GNNGQTTGVGYPVGIALDPSRGRLYWTDHGSDSGVPAKVAAADMDGSNPTVLFSGNMDHVDFITLDMREQKLYWAVAGTGVIERGDVTGLNRITVVQHL-SHPWGVAVHESHLYYTDYDYEVVERVGKD-GSTPVLMRSNIP-GLKCLKVHFRDTSSGTTNACSSGNGGCQQLCLP 1997 HSP 8 Score: 87.4261 bits (215), Expect = 1.529e-17 Identity = 89/362 (24.59%), Postives = 146/362 (40.33%), Query Frame = 1
Query: 1258 KCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRI--HSPVGLAYDWIHGLLFWSDIHFNE--ISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKIS--VYNLKTFQ-RRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKP------MG----VKLFHQLAQPVNIE----NACI--NHTCQYLC--LPTSMNLE--------NYIKFRCICPDFSYLL 2244
C C GF ++ D C + E F++ S ++IR + P T + +D S ++W I + K +T+V S I G+A DW+ G L+++++ +E + V + R+ L + + + R + V P+ R +FW D G+ PKIE +DG +R V++ GL +P L +D D +YW D +I + T+Q R+ + +G I + L D + K++Q K+ S P P +G V +F QP E N C N CQ C LP+ + C+ P YL+
Sbjct: 2004 ACGCSTGFQLAPDQISC-RLYESFVIVSQLSAIRGFHINSTDHSEAMVPVAGTGRNA-LHVDVHMPSGFLYWCDHGSASTYRGIRRI--KPDGSGFQTVVSSGIGPSGVAGIAVDWVAGNLYFTNVFSSETHLEVQRLDTSFRRVLFKT-SVDRPRHLAVDPRARFLFWVDAGQRPKIERAFLDGTNRSVVLDVGLLSPRSLTIDRATDWVYWADDGLDRIGRLAPDGSTWQVVREGRGYPAPYGLAI--YGSNLIWVDRNLRKVLQASKEP-----QASPPPPEVIRDNLGTLRDVTIFDPRVQPTAPELINFNPCRLNNGGCQQFCFALPSVTTATCACAHGELGSDRVSCVMPSDEYLM 2353 HSP 9 Score: 79.337 bits (194), Expect = 3.780e-15 Identity = 86/322 (26.71%), Postives = 127/322 (39.44%), Query Frame = 1
Query: 379 PMNCISKTSLCNHNNDCSDGSD----ESPEACEIINKPLVVQCD---NSIHFQCENKQLCISRIYYCDGKSDCSDQSDE------------------KNCPDSENSKSKSQSLADLV-KQSTICQN-----NEFYCGAGSTVPCIAKEWRCDGSYDCPE-TYKDELNCSNFECSP---------------------------DKPN----------------RCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCE-QKCI 1116
P C S C+H + G E P+ I+ V+C S F+C++ + CI + CDG+ DC D SDE NC S + + + D ++ T+C N N++ C CI W CDG DC + + +D C+ C+P D+P+ C+T C C+G DC DNSDE+ C+ ++CDP +++C N+ CI + CD+ +DCGDGSDER NC C + C Q+CI
Sbjct: 3431 PNPCGSNNGGCSHLCLVAAGGTGFQCECPDDFAAIHVGTTVRCLARCTSTQFRCQDDERCIPIWWKCDGQRDCRDASDEPATCPHRYCPIGRFQCRDGNCTSSNLLCNGNNNCPDGSDEEDTLCFNHRCNSNQWQC---MNKRCIPAAWLCDGGPDCQDGSDEDSATCAARTCAPGQFRCNNGRCIPRSWVCDVDDDCGDGSDEPHDTCMGPSHRCDSHTEFACRTNYRCIPTWAVCNGMDDCRDNSDEQGCA-----EITCDPLGDYRC-DNHRCIPLRWRCDRYDDCGDGSDER------NCAPRPCSESEFRCTNQRCI 3737 HSP 10 Score: 60.077 bits (144), Expect = 2.755e-9 Identity = 47/159 (29.56%), Postives = 66/159 (41.51%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNC 603
C F C N CIP + CDG ++CGD SDE H C+ G+ CDN+ CI +CN +DC DGSDE+P+ C+ +P C F+C + + CI C+ ++C D +DE C
Sbjct: 3807 CPPSSFECDNHVCIPPSWKCDGDNDCGDGSDEELHHCLDTPCNPP----------GRFRCDNNR-----------------------CIYSHEICNAVDDCGDGSDETPDKCK---EPTFAPCTEE-EFKCASGR-CIPMAAVCNNYNECRDNTDETGC 3927 HSP 11 Score: 57.3806 bits (137), Expect = 2.213e-8 Identity = 37/110 (33.64%), Postives = 48/110 (43.64%), Query Frame = 1
Query: 118 YKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE 447
Y CR+ QF C+NG+CIP CDG ++CGD SDE T LC + C+ F C C++ +CN NDC+DGSDE
Sbjct: 2991 YPTCRQNQFTCENGRCIPRIFACDGDNDCGDGSDE-----------------DTHLCHQPSP-------------TCAPGFFRCGAG--ECVAIHLVCNQANDCADGSDE 3068
BLAST of low-density lipoprotein receptor-like vs. Ensembl Sea Lamprey
Match: lrp1ab (low density lipoprotein receptor-related protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-030131-7126]) HSP 1 Score: 293.893 bits (751), Expect = 9.284e-83 Identity = 232/768 (30.21%), Postives = 356/768 (46.35%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE---ICDHRET-----FTCSDSNIILKTELCDGKADCDNDEDPK--ICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNC------------------------PDSENSKSKSQSLADLVKQST----ICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNF--ECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKC-INFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE--KFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDH-LVSKTGNMKP-RTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE-PKIECMGMDGQDRKVL---IKDGLWTPNGLALDYYFDDLYWVDAKTRKI--SVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILV--SSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIK-FRCICPDFSYLLNDGKTCS 2265
+C +F C+NG+CI E CDG ++C DNSDE IC H+ T F C ++ I LCDG DC N ED C C +QF C + +CI + C+ ++DC D SDE P PL F C N + CI+ + CD +DC+D SDE C D++ ++ + K +T C +EF C A CI WRCDG DC +T DE C C P C+ C CDG DC DNSDEE C + C P + ++ C++ +++CD +DC DGSDE CD+ C++NNG C C + C C G ++ ++ C +D CA H+ CS +C KC C++G+ + D + C ++ F+++S ++ IR + L + +L T I IDF +++WT + +I H +S+TG + +V + +P GLA DWI G ++W + + ++I V + MR TLV G R+I + P+Y +FWTDW P+IE + M G R V+ + G W PNGL +DY + + W+DA++ I ++Y+ +H F + +F +Y +DW +++ +K TG+ +V ++ +P + +FH QP+ N C ++ + C + L NY + C CP L D +TCS
Sbjct: 826 QCHPGEFACKNGRCIQERWRCDGDNDCLDNSDEAPEIC-HQHTCPSDRFKCQNNRCIPLRWLCDGDNDCGNSEDESNTTCAARTCPPNQFSCASG--HCIPMSWKCDLDDDCGDRSDEPPSCAYPTCFPLT-------QFACNNGR-CINMNWRCDADNDCADASDEIGCNHSCSISQFKCNSGRCIPSHWTCDGDNDCGDFSDETNPNCTKLATRPPGGCHGDEFQCKADGQ--CIPLRWRCDGDTDCIDT-SDEKECDGVVRTCDPTLQFSCRDTGRCISKTWFCDGDNDCEDNSDEEGC-----ETMLCKPPSHSCANDSSICLSPKKLCDGHSDCPDGSDE-----GMLCDQ--CQVNNGGCTHNCTVAPGEGVVCSCPSGMQLGK-DKKSCDFMDYCARHLRCSQRCEQEKSIVKCGCYDGWMLMPDGENCQSLDPFVPFIIFSNRHEIRRIDLHKGDYSVLVPGLRNT-----IAIDFHLNQSSLYWTDVVED----KIYHGKLSETGGLTSVEVVVQHGLATPEGLAVDWIAGNIYWVESNLDQIEVARLNGTMRSTLV-AGGIEHPRAIALDPRYGILFWTDWDSSFPRIEAISMSGTGRHVIHHEMGAGGW-PNGLTVDYLENRIMWIDARSDSIYSALYDGTELIEVLRGHEFLSHPFAVTLFGGEVYWTDWRTNTLVRANKWTGQNVTVVQRTNTQPFDLHVFHPTRQPM-ANNPCGDNEGRGPC--SHHCLINYNRTAACTCPHLMKLQPDKRTCS 1552 HSP 2 Score: 282.722 bits (722), Expect = 4.401e-79 Identity = 225/768 (29.30%), Postives = 353/768 (45.96%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI------CDHRETF--------TCSDSNI-ILKTELCDGKADCDNDEDPKICVKNK----CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKN--CPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGST--------------------VPCIAKEWRCDGSY-----DCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNP--SQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINN-GNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMS-KDNKQCLAVG--EKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP--KPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C +F C +G CI C+ +C D SDEI C H +C+ +++ +L +CDG DC + D K C K CS D F C + P CI C+ DC DG+DE +N ++ D HF+C+N + CI++ + CDG+ DC D+SDEK+ C + +L + ++ +N C T VP A+ S D P ++ C+N C + S ++ CDG DC D SDE NP S +N C+ + F C N C+ +C+ +DC DGSDER NC+ N C C Q+C + KC C+ G+++ +T C+D DEC CS C N GS+KC C +G+ D+ C A+ E L+++ + +R++ L +L N + +DF++ + ++WT +++ H+ + RT + +P GLA DWI G L+W D + I V + NG+ +T++ + R++ V + ++W+DWG+ P I MGMDG +R V+I + PNGL+LDY + +YW DA+ I ++ R VVS H F + +FED +Y +DW+ + + + HK TG + + S +PM + ++H QP + C N C LCL + +++C CP YL +DG+TC
Sbjct: 2582 CGADEFRCGDGSCIANVTRCNQVVDCDDISDEIGCGPMNCTHYHRLGVQASGYVSCNSTSLCVLPAWICDGANDCGDYADEKNCKKKSGSPGCSPDYFNCPSGP--CIPTAWKCDREPDCDDGADE-------LNCDMLCAVD---HFECDNGK-CITKRWMCDGEDDCGDRSDEKDAHCTFRACANIAYSALHLTIVITSHWLHNHSRCCLLPTEQSIYMRILNVSTRKHVCVCVPMHARRLSVHSSLTVSFADYPMCGPNQFRCANGRC---------LLKSSWE----CDGDFDCHDRSDEAPI-NPHCSANNSKCNDSSSFPCA-NGRCVNESMLCNNQDDCEDGSDER------NCNINECADRRISGCTQECTDLKIGYKCKCRAGFQLKDDGKT-CVDRDECRTTYPCSQTCLNSHGSFKCLCTDGYRQRVNDSTSCKAISDEEAILIFANRYYLRKVNLDGSNYTLLKQGLNNA-----VALDFEWSEQWVYWTDVTTQGSMIRRMHMNGSDTQVLHRT----SLSNPDGLAVDWIGGNLYWCDKGRDTIEVSKL-NGLYRTVLLNNGLKEPRALAVDVRGGYLYWSDWGEHPHIGRMGMDGSNRSVVIDTKITWPNGLSLDYVNNRIYWADAREDYIQFADMDGANRHTVVSEDIPHIFALSLFEDHVYWTDWETKTVNRAHKSTGADRTTLISTLHRPMDLHVYHPFRQPDVPNHPCKVNNGGCSNLCLISPGG-----QYKCACPTNFYLASDGRTC 3299 HSP 3 Score: 270.396 bits (690), Expect = 4.209e-75 Identity = 232/730 (31.78%), Postives = 342/730 (46.85%), Query Frame = 1
Query: 127 CRRFQFLCQN-GKCIPETLHCDGHDNCGDNSDEI---CDHRE----TFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELN-CSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNN-TCIAFQRVCDKTNDCGDG-SDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELR-LLRHYMDMLYSPKNPTSNFLPI-GIDFDYKSKNIFWTQFEPNP-EIVQI----DHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA--HGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMG--VKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLN 2247
C + +F C+ G+CIP CDG D+CGD SDE C+ R F C ++ + CD DC ++ D + C CS +F C CI+ C+ ++DCSDGSDE K +CD+ FQC N CI + + CD DC D SDE NC A +V+ C ++EF C + C W+CDG DC + + C F+C P + RC+ C+ ++CDG +C D SDEE C PS C+ +EFKC CI+ Q VC++ +DCGDG SDE G + ++ +N + C + C CKPG++ + C D++ECA VC+ C N GSYKC C + Y+ + C A G E+ +LY N+ E+R L + +M Y + I +D KS IFWT + ++++ +H + + L S + P G+A DW+ L+W+D + I V + RKTLV G + +IV+ P +++W+DWG KIE MDG R ++ L P GLA+D+ LYW DAK I L R V H F I++FED++Y + N ++ +IHK + +++ + +FH L QP + N C C++LC L N C CP+ L+N
Sbjct: 3463 CGQEEFRCKGTGRCIPSRWKCDGDDDCGDTSDEPKEECEDRTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEEGCTPRPCSESEFSCANG--RCIAGRWRCDGDHDCSDGSDE---------KDCSPRCDHD-QFQCRNGH-CIPQRWRCDADIDCIDGSDEDNC-------------AAIVR---TCPHHEFQC---NNTLCKPLSWKCDGEDDCGDNSDETPEMCLKFQCPPGRQFRCRNNRVCFWAGRQCDGVDNCGDGSDEENCEKPSPKPRICNS-SEFKCGGTERKCISTQLVCNRFDDCGDGGSDEVACGGDQFVNECHRPLNPCGDDAICHDTLRGYYCECKPGFQRKATTSI-CEDVNECAQFGVCTQLCNNTKGSYKCNCSKN-YIKGLHHSCKAEGSEQMVLYIADNN--EIRSLAPNNPNMAYEQAYQGDATVRIDAMDAHVKSNRIFWTNWHMGRISMLELYPAGEHRHRRQTSGTVVDLDISGLKMPRGVAVDWVADNLYWTDSGRDVIEVAQLRGHYRKTLVS-GMIDEPHAIVLDPIRGQMYWSDWGNNAKIEQASMDGTRRHNFVEKDLQWPTGLAIDFMNQRLYWADAKLSVIGSIRLDGTDRVVAVDSKQGLLHPFSIEIFEDYIYGVTYVNNRVFRIHKFGSGTVVNITAGMSHATDIVVFHPLKQP-EVINPCEQRKCEWLC------LLNPNGATCSCPNGWALVN 4147 HSP 4 Score: 177.563 bits (449), Expect = 2.596e-45 Identity = 141/510 (27.65%), Postives = 222/510 (43.53%), Query Frame = 1
Query: 799 CSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDE--EFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGK--SENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPK-NPTSNFLPIGIDFDYKSKNIFWTQF--EPNPEIVQIDHLVSKTGNMKPRTLVYS-RIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA-HGFDIDVFEDWLYLSDWDNE------KIIQIHK-KTGKQKILVSSPKPMGVKLFHQLAQPVNIENACI------NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
CSP + CK +C RCDG DC D SDE E C P++ N + C+ CI ++CD NDC DG DE + +ENC LC+ KC C C G+ + + +E C D DECA + CS C N GSY C C EG+ + D+K C A + + ++ Y++ P P + +DF Y + W P + L G R + S +H +A DW+ G ++ D + I V N TL+ L ++ ++I + P ++F+TD+G+ PK+E MDG + L+ + P+G+ALD +YW DA I V + + RR ++ + H F + VFE++LY + DN +I++++ + ++L K + ++H+ QP + C C +CL S ++ C C L +DGK+C
Sbjct: 5 CSPTQ-FVCKDGLTCISLGWRCDGEKDCPDGSDESPEICQKPNEMKCQ---VNHYHCLGTELCIHMSKLCDGNNDCPDGYDEGTHCREFAENCTVTLCR-------HKCAVTREGPACYCTVGHEV-TPDEKGCKDFDECAVYGTCSQNCLNTDGSYSCSCVEGYLLQPDSKSCKAKNDPVDRPAALLIANSQNVVATYLNGSIVPGLTPVATRQASAMDFSYSEEMACWVNVGDSPTESRLHCARLAGLKGFSGERVINISLNVHHVEQMAIDWLTGNFYFMDDVDDRIFVCNKQGDTCVTLLDLELYNP-KAIALDPTMGKLFFTDYGQIPKVERCDMDGGNCSKLVDSKIVFPHGIALDLVSRLVYWADAYLDYIEVVDYEGRNRRTIIQGPSVEHLFGLSVFENYLYATSIDNSNSPQNTTVIRVNRFNSTDYQVLTRVVKGGALHIYHRRRQPTGGSHPCAPDQYGKPGGCSDICLLAS----SHKTRTCRCRSGFSLGSDGKSC 497 HSP 5 Score: 151.754 bits (382), Expect = 2.452e-37 Identity = 104/340 (30.59%), Postives = 159/340 (46.76%), Query Frame = 1
Query: 1261 CECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV-SHLNAHGFDIDVFEDWLYLSDWD--NEKIIQIHKKTGKQKILVSSPKPM---GVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C C G+ + D + C +G FLLYS IR + L P + TS L +GIDF + I+W + H + + ++ + + G+A DWI G ++W D F+ I V + R ++ G K R+I VHP +FWT+WG+ P+IE +DG +R VL+ + PNG+++DY D LYW DA+T KI +L+T + R+VV S N F + VF D++Y SD N I + K+ + + + + VK+F++ Q A N C+ LCL + C C L DG +C
Sbjct: 1841 CRCTAGYNLQADQRNCEGIG-AFLLYSVHEGIRGIPLDPADKTDALVPISGTS--LAVGIDFHAGNDTIYWVDMG-----LSSIHRAKRDQTWR-EDIITNGLGRVEGIAVDWIAGNIYWIDQGFDVIEVARLNGSFRYVVISQG-LDKPRAIAVHPDKGYLFWTEWGQNPRIERSRLDGTERTVLVNVSIAWPNGISVDYEEDKLYWCDARTDKIERIDLETGENREVVLSTSNMDMFSVSVFGDYIYWSDRTHANGSIKRGSKENATDVVALRTGIGVQLKDVKVFNKERQKGTNVCARQNGGCEQLCL-----YRGKARRMCACA-HGLLAEDGVSC 2164 HSP 6 Score: 119.013 bits (297), Expect = 2.949e-27 Identity = 115/335 (34.33%), Postives = 146/335 (43.58%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICD------HRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDES--PEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE-KNCPDSENSKSKSQSLADLVKQSTICQNNEFYC-GAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNC 1101
C +F+C+N KCIP CD D+CGD SDE D F C + +CDG DC + D C + C QF CRT CI CN ++C DG DE PE N+ FQC + + CI R++ CD +DC D SDE NC C EF C G G +P K D D + K+E C + C P + RCK + C +CD DC DNSDEE C+ P + S EF C N CIA + CD +DC DGSDE+ S CD + + NG+C
Sbjct: 3303 CTASRFVCKNDKCIPFWWKCDTEDDCGDRSDEPADCPDFKCRPGQFQCKNGICTNPAFICDGDNDCGDGSDEANCDVHVCLPSQFKCRTT-HRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPNQ-----------FQCSSTKRCIPRVWVCDRDNDCGDGSDEPANC------------------TQMTCGQEEFRCKGTGRCIPSRWKCDGDDDCGDTSDEPKEE--CEDRTCEPYQ-FRCKN-NRCVPGRWQCDYDNDCGDNSDEEGCT-PRPCSES-----EFSCA-NGRCIAGRWRCDGDHDCSDGSDEKD--CSPRCDHDQFQCRNGHC 3594 HSP 7 Score: 108.227 bits (269), Expect = 6.682e-24 Identity = 94/271 (34.69%), Postives = 122/271 (45.02%), Query Frame = 1
Query: 139 QFLCQNGKCIPETLHCDGHDNCGDNSDE---ICDHRET----FTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDE---SPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNC------SNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEE 903
+F C NG CI L CDG +C D SDE C R+ C + + +LC+G DC ++ D C + C D+F C +CI+ + CN DC D SDE P C ++ L VQ S + C + LC+ + CDG +DC D +DEKNC K KS S C + F C +G PCI W+CD DC + DELNC +FEC K C CDG DC D SDE+
Sbjct: 2506 EFECNNGDCIRYHLTCDGVADCKDKSDEKPFYCTSRQCKNGYVNCLNGRCMETLKLCNGVNDCGDNSDEIACNNSTCGADEFRCGDG--SCIANVTRCNQVVDCDDISDEIGCGPMNCTHYHR-LGVQA--SGYVSCNSTSLCVLPAWICDGANDCGDYADEKNC------KKKSGSPG--------CSPDYFNCPSG---PCIPTAWKCDREPDCDDG-ADELNCDMLCAVDHFECDNGK---------CITKRWMCDGEDDCGDRSDEK 2744 HSP 8 Score: 99.7525 bits (247), Expect = 2.192e-21 Identity = 93/354 (26.27%), Postives = 148/354 (41.81%), Query Frame = 1
Query: 1261 CECFEGFYMSKDNKQC-LAVGEKFLL--YSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVS--KTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISV--LNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEP------KIECMGMDGQDRKVLI--KDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN-AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSP 2268
C C GF + D K C + + LL S IR + + D P N P +DF ++ +++ + LV+ K + T++ + I++ G+A DW+ L+W+D I+V L + R+TL+ GN + R+I V P + ++WTDW ++P KIE MDG R + + K LW PNGL+LD LYW DA +I L +R+ V +H F + ++ +++ + + + +L + P+ + Q + NAC N C LCL C C D L D TC P
Sbjct: 482 CRCRSGFSLGSDGKSCKMCITNLCLLKRLSRPGIIRGMDVTGRVQDEFMIPIENLVN--PRAVDFHAETGYVYFAD--------TTNFLVARQKIDGTERETILKTNINNVEGIAVDWMGYNLYWTDDGLKTINVARLEKASQARRTLIE-GNMTHPRAIAVDPVHGFMYWTDWEEDPKGTKRGKIEHAWMDGTHRSIFVSSKTVLW-PNGLSLDIPNGILYWCDAYFDQIERIKLDGTERKVVYDGQELSHPFGLTHHGHNIFWTEYRLGTVYRYDTISRNTTVLRNERPPIFEIRTYDREQQKSGTNACHVNNGGCSILCLAVPEGRA------CACADDQLLDADNITCKP 817 HSP 9 Score: 92.8189 bits (229), Expect = 2.797e-19 Identity = 82/328 (25.00%), Postives = 145/328 (44.21%), Query Frame = 1
Query: 1222 CSHKC-ANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWS--DIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNL--KTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILV--SSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTS 2184
CSH C NY + C C + D + C + KFLLY+ + IR + + Y + + S P + + +DF + I+W+ I N++ T+V + + + GLA DWI G L+W+ D + +I+V + +G KT V L K + +HP +++WTD I MDG ++ +L P GL++DY LYW+ + I+ L + + + + + D L+ +D +E++ K+ G +++ S+ M ++++ + Q + N C LCLP S
Sbjct: 1522 CSHHCLINYNRTAACTCPHLMKLQPDKRTC-SEHWKFLLYARQMEIRGVDIDAPYYNFIISFTVPDIDNV-TAVDFHGAEQRIYWSDVRTQ----TIKRAFINGTNVE--TIVSADLANAHGLAVDWISGNLYWTSYDANKKQINVARM-DGSFKTAV-LQGLDKPHGLALHPIKGKMYWTD---GDTINVANMDGSEKAILHSQQK-GPVGLSIDYEESKLYWISSGNGTINRCELDGSGLEIVETMKSKLTKPSALAIMGDKLWWADQASEQLGTCSKRDGSNAVVLRNSTANVMHLRVYDRDLQKGTNPCSVNNGNCAQLCLPRS 1835 HSP 10 Score: 92.8189 bits (229), Expect = 2.869e-19 Identity = 89/282 (31.56%), Postives = 120/282 (42.55%), Query Frame = 1
Query: 226 CDHRETFTCSDSNIILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSI----HFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNC----SNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDER 1041
CD + F C++ + I CDG ADC + DE P C +C C C+ LCN NDC D SDE + C+NS F+C + CI+ + C+ DC D SDE C + + Y ST C+ W CDG+ DC + Y DE NC + CSPD N C + C +CD PDC D +DE C ++ C + F+C N CI + +CD +DCGD SDE+
Sbjct: 2501 CDLQTEFECNNGDCIRYHLTCDGVADCKDKSDEKPFYCTSRQCKNGYVNCLNG--RCMETLKLCNGVNDCGDNSDE-------------IACNNSTCGADEFRCGDGS-CIANVTRCNQVVDCDDISDEIGC-----------GPMNCTHYHRLGVQASGYVSCNSTSLCVLPAWICDGANDCGD-YADEKNCKKKSGSPGCSPDYFN-CPS-GPCIPTAWKCDREPDCDDGADELNC------DMLC-AVDHFEC-DNGKCITKRWMCDGEDDCGDRSDEK 2744 HSP 11 Score: 87.4261 bits (215), Expect = 1.476e-17 Identity = 78/341 (22.87%), Postives = 142/341 (41.64%), Query Frame = 1
Query: 1261 CECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNP------TSNFLPIGIDFD-----------YKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGM-----RKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGK-EPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN-AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSS--PKPMGVKLFHQLAQPVNIENAC-------INHTCQYLCLPT 2181
C C G +++D C + +LLYS + ++ + L L +P P N + + D+ Y+ + IF++ + ++ + R ++ + S GLAY L+W+ + I+ + R+T+V + R+ V+ +FWT+W + P I + G + +V++ + TPNGLA+D+ + LY+ DA KI R V+ H F + V+ D+++ +DW +++ +K TG K+L +PMG+ N N+C +N C+ LCL T
Sbjct: 2150 CACAHGL-LAEDGVSCRDY-DGYLLYSERTILKSVHLFDELN--LNAPVRPFEDPEHMKNVIALAFDYGSGPRSTSGGVPYRRRRIFFSD-------IHFGNIQQLFNDGTGRRVIVENVGSVEGLAYHRGWDSLYWTSYTTSTITRHTVDQARPGAFDRETVVTMSADDHPRAFVMDECLNLMFWTNWNELSPSIMRSFLSGANVQVIVGSNIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVVILRSEPVHSFGLAVYGDFVFWTDWVRRAVLRANKFTGTDVKVLRGEIPQQPMGMIAL------ANDTNSCELSPCKVMNGGCEDLCLIT 2473 HSP 12 Score: 60.077 bits (144), Expect = 2.800e-9 Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 1
Query: 346 CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE 594
CS QF+C+ + CIS C+ DC DGSDESPE C+ KP ++C + H+ C +LCI CDG +DC D DE
Sbjct: 5 CSPTQFVCKDG-LTCISLGWRCDGEKDCPDGSDESPEICQ---KPNEMKCQVN-HYHCLGTELCIHMSKLCDGNNDCPDGYDE 82
BLAST of low-density lipoprotein receptor-like vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001137.1 (pep scaffold:Pmarinus_7.0:GL476464:95621:179961:-1 gene:ENSPMAG00000001008.1 transcript:ENSPMAT00000001137.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 281.567 bits (719), Expect = 7.263e-79 Identity = 221/724 (30.52%), Postives = 327/724 (45.17%), Query Frame = 1
Query: 163 CIPETLHCDGHDNCGDNSDE---ICDHR----ETFTCSDSNIILKTELCDGKADCDNDEDPK--ICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSP-----DKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKC-INFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEK-----FLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVV-SHLNAHGFDIDVFEDWLYLSD--WDNEKIIQIHKKTGKQKILVS---SPKPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLN 2247
CI + CDG ++C D SDE IC + F C ++ I LCDG DC +ED C C +QF C CI C+ +NDCSD SDE P PL F C N + CI+ + CD +DC+D SDE C ++ C +++F C G CI +W CDG DC + DE + F P + RC +C RCDG DC D SDE+ C + +C+P F CV N CI VCD NDC D SDE C LC+ + G C C + C C G ++ +T C D CA H+ CS +C G+ KC C++G+ + D K C + + F+++ST++ IR + L R Y ++ S +N I IDF + ++WT V ++ TG T+V + + + GLA DWI G ++W D F+ I V + NG + +V K +I VHP+ +FW++WG P+IE +DG +R L+ + +PNG+++DY LYW D +T +I +L+T R VV + F + VF +Y SD D+ I + K + + S + +K++++ Q +AC N C+ LCL ++ Y + C C L++
Sbjct: 1 CIQDQWRCDGDNDCQDGSDELPEICQQHTCISDRFKCKNNRCIPMRWLCDGDNDCGENEDESNTTCTVRTCPAEQFTCGNG--KCIPIAWKCDLDNDCSDNSDEPPSCAYPTCLPLT-------QFSCNNGR-CINIRWRCDSDNDCADSSDEAGCNNT-------------------CADSQFSCKNGH---CIPSQWVCDGDNDCGDV-SDETHTCEFPARPLRQCREDEFRCAINGNCIPLRWRCDGDADCMDISDEKECDGQRR---TCNPGTHFTCVSNGICIRKAWVCDGDNDCEDNSDE------AGCHVYLCQSDKGGCSHNCTVTPVDGLVCSCPKGMQLGEDRKT-CNFTDYCARHLRCSQRCEQEKGAVKCGCYDGWRLMLDGKSCRSTADADPFVPFIIFSTRHEIRRIDLHSRDYSVLVPSLRNA------IAIDFHFGQSTLYWTDVVDVRSRVIRRAFINGTG---VETIVTTDVMNTHGLAVDWISGNIYWIDHAFDVIEVARL-NGSYRYVVVSEELDKPLAIAVHPQKGYLFWSEWGHSPRIERTLLDGTERMALVNSSIASPNGISIDYDEGKLYWCDGQTDRIERVDLETGANRHVVLVATTSDMFSVSVFGSHIYWSDRMQDSGSIKRGSKDNAADAVDLRTGISTQLNELKVYNRDRQKGVALSACKHTNGGCEDLCL-----VDEYGEVTCQCRGERTLVD 666 HSP 2 Score: 276.944 bits (707), Expect = 2.012e-77 Identity = 217/730 (29.73%), Postives = 322/730 (44.11%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPE-TYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVK-NNTCIAFQRVCDKTNDCGDG-SDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLY-STKNSIREL---RLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRT----------LVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA--HGFDIDVFEDWLYLSDWDNEKIIQIHK-KTGKQKILVSS-PKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLN 2247
K C +QF C+N +CIP HCD +DN DC ++ D + C CS +F C CI+ C+ ++DC DGSDE K ++C+ FQC+N CI + + CD +DC D SDE+NC + +C +EF C ++ C WRCDG DC + + +D +C F+C P + RC+ C D+ CDG +C D+SDEE C P++ +C EFKC CI + +C+ +DCGDG SDE G N C N E C + C C+PG++ ++ + + C D+DEC CS C N GS+ C C E F + E+ ++Y + N +R L R Y +L + + + + + ++ +FWT N + I + + G +PR+ L + +P G+A DW+ G L+W+D + + V ++ RKTLV G +I + P +++W+DWG KIE MDG R+ +++ + P GLA+DY LYW D K IS L R VS H F IDVFED +Y + N ++ ++HK G + L +FH L QP + N C C+ LCL N C CP+ L N
Sbjct: 874 KTCEPYQFRCKNNRCIPGRWHCD-YDN---------------------------------DCGDNSDEEGCTPRPCSESEFSCANG--RCIAGRWRCDGDHDCMDGSDE---------KDCSLRCEQD-QFQCQNGH-CIPQRWRCDNDADCLDGSDEENCGSAVR----------------LCPKDEFQC---NSTLCKPFSWRCDGEDDCGDNSDEDADHCRAFQCPPRRQFRCRNDRVCVSLDRVCDGINNCGDHSDEEHCGEPARGARACTA-EEFKCDSLERKCIDVRLLCNHHDDCGDGGSDEMACGGDPR--VNECLSNACGFEASCHDTLQGYYCSCRPGFQWNA-SISSCEDVDECLHFGTCSQVCNNTKGSHVCSCAENFVKVHHHSCKANDSERTMIYVADNNQVRGLSPQRANARYTQVLLGDDSVRVHSMGVHV----RTARLFWT----NWHLGSISSMELRPGAGRPRSVRDDTAAVVRLEIPGLRTPSGVAVDWVAGNLYWTDSGRDVVEVAQLSGQNRKTLVS-GMIDDPHAIALDPVRGKMYWSDWGNNAKIEQASMDGTRRRNFVEERVQWPTGLAVDYMNQRLYWADTKLSVISSIRLDGTDRVVAVSIKQGLLHPFAIDVFEDHIYGVTYTNSRVFRVHKFGNGTVEFLTMGLSHATHALVFHPLKQPEAVANPCERKKCERLCLL------NPNGATCNCPNGHSLAN 1518 HSP 3 Score: 116.316 bits (290), Expect = 1.767e-26 Identity = 145/606 (23.93%), Postives = 239/606 (39.44%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE-------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYR--IDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAV----GEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPI-GIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYS-RIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMD-GQDRKVLIKDGLWTPNGLALDYYFDDLYWVD 1890
+ C QF C NGKCIP CD ++C DNSDE C F+C++ I CD DC + D C N C+ QF C K +CI +C+ +NDC D SDE+ CE +PL QC F+C CI + CDG +DC D SDEK C ++ T F C + CI K W CDG DC E DE C + C DK CS HN + P + C +C ++ G D + ++ C ++L C Q+C KC C G+R +D + D D ++ S + + + + + + +A+ G+ L ++ +R + R +++ T++ + G+ D+ S NI+W + +++++ L N R +V S + P+ +A G LFWS+ + + +G + + + + I + +++W D G+ +IE + ++ G +R V++ T + ++ + +YW D
Sbjct: 69 RTCPAEQFTCGNGKCIPIAWKCDLDNDCSDNSDEPPSCAYPTCLPLTQFSCNNGRCINIRWRCDSDNDCADSSDEAGC-NNTCADSQFSC--KNGHCIPSQWVCDGDNDCGDVSDET-HTCEFPARPL-RQCRED-EFRCAINGNCIPLRWRCDGDADCMDISDEKECDG---------------QRRTCNPGTHFTCVSNGI--CIRKAWVCDGDNDC-EDNSDEAGCHVYLCQSDKGG-----------------------------CS----HNCTVTPVDGLVC----SCPKGMQL---------GEDRKTCNFTDYCARHL------RCSQRCEQEKGAVKCGCYDGWRLMLDGKSCRSTADADPFVPFIIFSTR--HEIRRIDLHSRDYSVLVPSLRNAIAIDFHFGQSTLYWTDVVDVRSRVIRRAFINGTGVETIVTTDVMNTHGLAVDWISGNIYW--IDHAFDVIEVARL-----NGSYRYVVVSEELDKPLAIAVHPQKGYLFWSEWGHSPRIERTLLDGTERMALVNSSIASPNGISIDYDEGKLYWCD-GQTDRIERVDLETGANRHVVLV--ATTSDMFSVSVFGSHIYWSD 586 HSP 4 Score: 87.0409 bits (214), Expect = 1.477e-17 Identity = 183/761 (24.05%), Postives = 285/761 (37.45%), Query Frame = 1
Query: 130 RRFQFLCQNGKCIPETLHCDGHDNCG------DNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSD----GSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE-KNC------PDSENSKSKSQSLADLVK------------------QSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSE--------NCDKNLCKINNGNC--EQKCINFYSH-----RKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMD---------MLYSPKNPTSNFLPIGIDFDYKSKNIFWT-------QFEPNPEIVQIDHL--------VSKTGNMKPRTLV------YSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNG-MRKTLVRLGNHS-KVRSIVVHPKYRRIFWTDW--GKEPKIECMGMDGQDRKV---------LIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHL--NAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKI-----LVSSPKPMGVKLFHQ 2112
R C +C+ L C G G D S+ C E F C + + C+ ADCD+ D C +C S+ + N+ N C D G+ AC + V HFQ +++ C+ R++ CD DC D SDE NC D K + + D K + C+ +F C +P W CD DC + DE C+ CS + + C C RCDG DC D SDE+ CS + C+ ++F+C +N CI + CD DC DGSDE G + C+ LCK + C E C + R C P + N+ C+ +D D + + C ++ C ++ + C A E+F S + ++RLL ++ D M + L F+ + F+ N I + + S+ N + V + ++H A D +++ +D N++ L+ R T V LG+ S +V S+ VH + R+FWT+W G +E G+ R V L GL TP+G+A+D+ +LYW D+ + V L R+ +VS + + H +D +Y SDW N I+ G ++ V P + V +Q
Sbjct: 679 RCVAVRCVGARCVGVRLRCVGVRCVGSSEQGPDPSNATCADHE-FRCGNGVCLPNATRCNQLADCDDVSDEVGC---------------GTSCGSQVTQ-NNMNACLDYVVQGNQRFXCACVCVRAAAAVATCAPSHFQLTSRR-CVPRVWVCDRDDDCGDGSDEPANCTQTMCGADEFRCKGTGRCIPDRWKCDGDDDCGDGSDEPRDECEDKTCEPYQFRCKNNRCIP---GRWHCDYDNDCGDN-SDEEGCTPRPCSESEFS-CAN-GRCIAGRWRCDGDHDCMDGSDEKDCS------LRCEQ-DQFQC-QNGHCIPQRWRCDNDADCLDGSDEENCGSAVRLCPKDEFQCNSTLCKPFSWRCDGEDDCGDNSDEDADHCRAFQCPPRRQFRCRNDRVCVSLDRVCDGI---NNCGDHSDEEHCG-----EPARGARACTA--EEFKCDSLERKCIDVRLLCNHHDDCGDGGSDEMACGGDPRVNECLSNACGFEASCHDTLQGYYCSCRPGFQWNASISSCEDVDECLHFGTCSQVCNNTKGSHVCSCAENFVKVHHHSCKANDSERTMIYVAD--NNQVRGLSPQRANARYTQVLLGDDSVRVHSMGVHVRTARLFWTNWHLGSISSMELRPGAGRPRSVRDDTAAVVRLEIPGLRTPSGVAVDWVAGNLYWTDSGRDVVEVAQLSGQNRKTLVSGMIDDPHAIALDPVRGKMYWSDWGNNAKIEQASMDGTRRRNFVEERVQWPTGLAVDYMNQ 1395
BLAST of low-density lipoprotein receptor-like vs. Ensembl Sea Lamprey
Match: LRP8 (LDL receptor related protein 8 [Source:HGNC Symbol;Acc:HGNC:6700]) HSP 1 Score: 225.713 bits (574), Expect = 3.840e-64 Identity = 140/442 (31.67%), Postives = 218/442 (49.32%), Query Frame = 1
Query: 820 RCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEK--FLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA--HGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQP 2124
RC T SC +CDG+ DC D SDE C+N + V C F+C ++ C+ ++VCD DC D SDE C+ N C NG C C + +C C GY + ++E C D DEC VCS C NY G YKC+C+EG+ M + C A + +L+++ + +R + L R Y ++ +N + + + + I+W+ + V H+ + + +++ G+A DW+HG L+W+D ++V R+TL G S+ R+I V P ++W+DWG+ KIE GM+G R+V++ + PNG+ LD LYWVD+K R +S NL +R +V+ +A H F I +FED +Y +D + E I K TG ++ P + ++H L QP
Sbjct: 10 RC-TDGSCVPGSSQCDGFRDCHDGSDEHDCNNTA---VDCTGPGWFRC-RSGECLQDRQVCDGKRDCHDWSDE----PLSLCNVNECATTNGGCSHTCWDRPLGYECGCPAGYEL--LDEYTCGDTDECKQPGVCSQLCINYKGGYKCDCYEGYTMDPATQACKATEHQKTYLIFANQRDVRRVDLHTRSYKQLISRTRNT------VAVAVEITANRIYWSDL--GQKQVYSAHMDEAHDSTRHTSVLGEAPVFVEGIAIDWVHGNLYWTDSKAKTVAVAKPDGSRRRTLFGQG-LSEPRAIAVDPLSGFVYWSDWGQPAKIEKAGMNGVSRQVIVSKDIEWPNGITLDLVNKRLYWVDSKLRTLSSVNLAGGERHEVMHQTDALHHPFAIAIFEDKVYWADGEKEAIYSADKHTGSGISSVVEDLHSPQDLLVYHPLLQP 431
BLAST of low-density lipoprotein receptor-like vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005337.1 (pep scaffold:Pmarinus_7.0:GL479201:36221:45319:-1 gene:ENSPMAG00000004851.1 transcript:ENSPMAT00000005337.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 153.295 bits (386), Expect = 2.779e-40 Identity = 94/255 (36.86%), Postives = 136/255 (53.33%), Query Frame = 1
Query: 1516 LVSKTGNMKPRTLVYSRIHSPV-GLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCS 2265
++ K + K +V + S V GLA DWIH L+WSD F +SV + +G R+ L G + R+IVV P ++W+DWG+ KIE GM+G +R ++ + PNG+ALD LYWVD+K +S ++ R V++ + H F I VFED +Y +D + E I ++K TG + +++ P + + H LAQP N C C+YLCLP F C C D S+L DGKTCS
Sbjct: 3 VIGKASDSKNHAVVIEQGLSFVEGLAVDWIHNTLYWSDSGFKTLSVATM-DGRRRKLFDSGLQ-EPRAIVVDPIAGWLYWSDWGEPAKIEKAGMNGANRHAIVTHDIQWPNGIALDLANRRLYWVDSKLHTLSSVDMSGQDRVTVLASYSDLLHPFSIAVFEDKVYWTDGEEEAIFSMNKFTGSGRRVLAENLHSPQDIVVVHPLAQPSG-PNRCEGSGCEYLCLPAPKVDAALPLFSCACADNSHLNPDGKTCS 254
BLAST of low-density lipoprotein receptor-like vs. Ensembl Nematostella
Match: EDO43726 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXU8]) HSP 1 Score: 356.295 bits (913), Expect = 6.447e-110 Identity = 249/731 (34.06%), Postives = 354/731 (48.43%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDN--SDE-----ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCE-NKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGE-KFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDG--QDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDW--DNEKIIQIHKKTGKQKILVSSP--KPMGVKLFHQLAQPVNIENACI--NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
K C + QF C+NGKCI T CDG D+C D SDE + + F CS+ I ++ CD + DC ++ D V+ C+ +QF C +CIS + C+ +NDC+DGSDE C + + F C +++ CI + CDG +DC D SDE CP + S + C F C G C+ WRCDG DC + DE C C+ + C C + QRCDG +C D+SDE+ C P C P EFKC CI +VCD T DC DG DE C+ + CK +NG+C QKC + C C GY++ C+DIDECA++ CS C N GS+KC C G+ + D + C A G L+YS++ SIR + + + S + +G+D+DYKS IFWT + E + L +G+++ + + P + DW ++W+D N I V +T R TL G + R+IVV P ++WTDWG +IE GMDG R ++I L PNGL +DY LYW DA+ ++I L RR + H F I VFE++LY +DW D + +++K TG ++ +V M +++ H L QP + N C N C +LCL + KF C CP+ + +DGKTC
Sbjct: 38 KTCLQDQFTCRNGKCIQATWKCDGEDDCRDGYRSDESNCGNVTCGADEFMCSNRKCISRSWTCDNQDDCGDNSDEDRNVQRTCASNQFTCSNG--DCISNSWTCDGDNDCNDGSDEKESLCASKSCKIT-------EFTCRTSRRKCIPSQWKCDGDNDCPDSSDESGCPTASVSPRR-------------CSVGMFKCRNGE---CVLGHWRCDGEKDCSDG-SDEKGCRKSNCASSEFT-CAN-GQCIPSSQRCDGTSNCRDSSDEKACVTPP----PCMP-GEFKCQSTGRCIPESKVCDGTRDCQDGEDE-----PLRCNIDECKDHNGHCSQKCNDLTLGYNCSCFSGYKLQGAR--LCVDIDECAEYGTCSQVCENRKGSFKCSCLPGYRIDGDGRTCRANGTLPSLVYSSQFSIRNVTVSGAISQAIVSGRKGV-----VGLDYDYKSNLIFWT--DAKAEKINRARL-DGSGSVEE---IVGDVKVPDDVTVDWSGRKIYWTDGEQNMIEVAELTGAHRMTLFSSG-LDEPRAIVVDPSAGYLYWTDWGYNARIERAGMDGDASTRTIIISGELGWPNGLTIDYTIKRLYWADARLKRIESSRLDGSDRRLIADIAPQHPFAITVFENYLYYTDWNRDERALRRVNKFTGGERTIVKRVLWPHMDIQVLHPLKQPY-LPNRCGDNNGGCSHLCLLAAAPR----KFSCKCPNGMNMSSDGKTC 711 HSP 2 Score: 90.1225 bits (222), Expect = 1.897e-18 Identity = 90/275 (32.73%), Postives = 115/275 (41.82%), Query Frame = 1
Query: 508 HFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYK-DELNCSNFECSPDK---PNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINE-TKCIDIDECADHMVCSHKCANYLGSYKC---ECFEGFYMSKDNKQC 1308
F+C + Q CI + CDG+ DCSD SDE+ P + C ++F C G CI W+CDG DC + Y+ DE NC N C D+ NR C CD DC DNSDE+ N + S N+F C N CI+ CD NDC DGSDE K C CKI C S RKC+ ++ D N+ D C V +C+ +G +KC EC G + K C
Sbjct: 5 QFECVSDQKCIVLRWRCDGEDDCSDGSDEQGSPKT-------------------CLQDQFTCRNGK---CIQATWKCDGEDDCRDGYRSDESNCGNVTCGADEFMCSNR-----KCISRSWTCDNQDDCGDNSDED--RNVQRTCAS----NQFTC-SNGDCISNSWTCDGDNDCNDGSDE----KESLCASKSCKITEFTCRT------SRRKCI-PSQWKCDGDNDCPDSSDESGCPTASVSPRRCS--VGMFKCRNGECVLGHWRCDGEKDC 232
BLAST of low-density lipoprotein receptor-like vs. Ensembl Nematostella
Match: EDO43938 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXB8]) HSP 1 Score: 334.339 bits (856), Expect = 3.834e-102 Identity = 247/730 (33.84%), Postives = 347/730 (47.53%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE-----ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSN---PSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEK-FLLYSTKNSIRELRL-LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIK-DGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILV--SSPKPMGVKLFHQLAQPVNIENACI-NHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTK 2274
C F C N +C+P + CDG ++CGD SDE C E F C D I T CD + DC + D + CV C+ +F C CI C+H +DC DGSDE + C+ K C+ C N + C+ + + CDG DC D SDE NC L C+ NE C G+ C+ + W CDG DC + DE C CS D+ T C Q+CDG +C D SDE+ C +Q C P + F+C + CIA +VCD T C G DER NCD + CK NG+C Q C N + C C GY + + C DI+EC +CS KC N GS+KC C EG+ + D ++C A+G + ++L++ +NSIR + + Y + K+ + + FD K ++WT + +Q +V T T+ + + P GLA DW+ ++W+D N I V + TL+ G K ++V+ P I+WTDWG KIE MDG RKVLI + L P GLA+DY LYW+D+K I NL + R V++ + I VFED +Y + D+ KI + +K TGK ++ ++ P ++H QP I N C +LCL +S N K+ C CP +L DGK CS +K
Sbjct: 1 CPPSDFTCANSQCVPNSFRCDGENDCGDRSDESEPTTTCSANE-FRCDDGRCITSTFRCDREFDCTDRSDERGCVNKTCAPYEFTCAFS-GRCIPGRFRCDHRSDCLDGSDE--QNCQNAAK----TCNPVTDHTCRNGR-CVLKEWLCDGMDDCGDSSDEDNC------------LTRPTPPPVKCRKNERMCADGNG--CVHRRWICDGERDCLDG-SDEAGCGTIGCSSDEFT--CTNQKCIPLPQKCDGTDNCGDGSDEKMCRKYLFSTQPGQVC-PRDHFRCGSSTICIANSKVCDATPHCPHGEDER------NCDIDECKSFNGHCLQLCTNTKTSFYCSCFSGYELMD-DRKSCRDINECEIPGMCSQKCYNTKGSFKCSCMEGYVLEPDGRRCKALGPRPYVLFTDRNSIRLIMTDGKEYKQAVQGLKDART------LGFDVKESMLYWT--DKAATAIQKAKMVPDT---TIETVHETGLVEPAGLAIDWVGRKMYWADPGANTIEVSELDGSNTMTLISSG-LDKPSAVVLDPTEGFIYWTDWGDPAKIERASMDGTARKVLISGEHLERPAGLAIDYSTRRLYWIDSKLDVIKHCNLNGTEVRVVINTGIDNPTAITVFEDHIYWT--DSRKIYKANKFTGKNMTVLVNNAASPEDAHIYHPQRQPTASSPCAIRNGGCSHLCLISS----NKNKYSCNCPKDLFLQLDGKICSKSK 678
BLAST of low-density lipoprotein receptor-like vs. Ensembl Nematostella
Match: EDO48069 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJZ9]) HSP 1 Score: 312.383 bits (799), Expect = 2.151e-94 Identity = 224/668 (33.53%), Postives = 318/668 (47.60%), Query Frame = 1
Query: 331 CVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDES---PEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNC-------SNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFC---SNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEK-FLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKP-RTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDG--QDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSP--KPMGVKLFHQLAQ-----PVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C C+ +F C CIS+ +C+ +NDC D SDE+ P C F C +K+ +SR + CDG DC+D SDE NCP+S S C+++E+ C G CI K W CDG +DC DE NC S F C+ + C RC+G DC DNSDE C S + S EF+C + CI +VCD + DC + +DE +NC N CK NNG C+ C + + C C+PGY++ + C D+DECA CS C N GSYKC C EG+ + D K C A+G+K FLL++ + IR L + + PK + I +D+D+ + I+W+ ++++ + N T+V + +P G+A DW++ L+W+D + I V N+ R L+ G + R+IVV+P +FWTDWG+EPKIE GM+G + R ++ + PN L +DY D ++W DAK I NL RR + S H F I VF+D++Y +DW E I + +K GK + LV S PM + ++ Q Q P N +HTC LP S C CP LL D TC
Sbjct: 37 CGNKTCAPHEFSCGNG--RCISQQWVCDQDNDCGDFSDENHCPPHTCR------------PNEFTCADKRCILSR-WRCDGDRDCADNSDEINCPNS----------------SQYCKSSEYQCSTGE---CIHKSWVCDGEFDCLNK-SDENNCHSSACHISQFTCANKR---------CIPMRDRCNGNNDCLDNSDEADCRMFSLLATKPPSICKDGEFQCGSSKQCIPESKVCDGSVDCTNSADE-----PDNCFINECKDNNGPCQHYCNDTKTGYFCSCRPGYKVALDDPKSCRDVDECAIPGSCSQMCFNSKGSYKCTCMEGYRLEPDKKTCKALGDKPFLLFTNRQDIRRLVMDSSDFTQVV-PKLRAA----IALDYDFATGVIYWS------DVIEASIKSAPLNNGSAVETIVNMSLLTPDGIAVDWVNRKLYWTDTGTDVIEVANLDGRERMRLITTG-LQEPRAIVVYPAIGYMFWTDWGEEPKIERCGMNGDPKTRLQIVNTNILWPNALTIDYTIDKIWWADAKEHTIECANLDGTARRVITSDSVHHPFAITVFQDYIYWTDWVKESIYKANKFNGKDRSLVCSGLYSPMDIHVYQQQKQPKFSNPCGENNGGCSHTCLLAPLPKS--------HTCHCPPNINLLEDSATC 635 HSP 2 Score: 88.9669 bits (219), Expect = 4.167e-18 Identity = 64/168 (38.10%), Postives = 82/168 (48.81%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEI--------CDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIIN----KPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDE 594
CR +F C + +CI CDG +C DNSDEI C E + CS I K+ +CDG+ DC N D C + C I QF C K CI CN NNDC D SDE+ C + + KP + D FQC + + CI CDG DC++ +DE
Sbjct: 81 CRPNEFTCADKRCILSRWRCDGDRDCADNSDEINCPNSSQYCKSSE-YQCSTGECIHKSWVCDGEFDCLNKSDENNCHSSACHISQFTCANK--RCIPMRDRCNGNNDCLDNSDEA--DCRMFSLLATKPPSICKDG--EFQCGSSKQCIPESKVCDGSVDCTNSADE 241
BLAST of low-density lipoprotein receptor-like vs. Ensembl Nematostella
Match: EDO49498 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGB0]) HSP 1 Score: 303.908 bits (777), Expect = 1.932e-91 Identity = 224/689 (32.51%), Postives = 320/689 (46.44%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE---------ICDHRETFTCSDSNIILKTELCDGKADC---DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG--EKFLLYSTKNSIRELRL--LRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVL---IKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNA--HGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQP 2124
C +F C+NG CI CDG ++C DNSDE C E + I + CDG DC D ++ V CS F C C + +C+ +DC DGSDE K F C + + CI + CDG DCSD +DE+ CP C +++F C G CI+ WRCDG +DC + DE NC+ C P + C C CDG DC D SDE C S N + ++C + CIA +VCD DC D SDE PG C + C NNG C Q C++ +C C+PG+ + S N+T C DI+EC + CS +C N GS+ C+C +G+ + D ++C A FL +ST+ IR+L L + Y + +N IGIDFD++ K ++W+ V + TG L+ + + G+A DWI L+WSD+ + I V + R+ L+ S R +V+ +FWTDWG P++E +DG +R V+ IK +W PNGL LD +YW+DAK I +R V+S H F + +FED+LY +DW N+ ++++ K G+ L+S+ KPM + H L QP
Sbjct: 1 CSAGKFTCKNGHCISLRWKCDGENDCVDNSDEDEYAGCAEWSCRASEFRCQASRKCIPLSWRCDGDYDCLAPDLSDEANCSVATNCSASMFRCANG--QCKPRDWVCDGFDDCGDGSDE---------KGCANHSCTPAQFSCPSGR-CIPLRWRCDGDGDCSDGADERGCPPKN------------------CTDSQFSCSNGQ---CISLAWRCDGDHDCADK-SDERNCTGKTCKPFE-FACANGRHCIQRKWICDGENDCGDRSDEVDCGLESCGN------DRWRCSNTSRCIAKSQVCDGRVDCPDASDEGPG-----CGLDQCHSNNGGCAQLCMDVPEGVQCSCRPGFTLASDNKT-CEDINECLNSSSCSQRCFNTRGSFSCKCVQGYRLEPDKRRCKAADSIRPFLYFSTRREIRKLGLPPSQSYTFAVRRLRN------TIGIDFDWREKRLYWSDVYKK---VISRSYFNGTGR---EDLITDALITAEGVAVDWIGRNLYWSDMRSDRIEVSTLEGKWRRVLLSEDVESP-RGLVLDSNAGYLFWTDWGTSPRVERSWLDGSNRFVISFGIKI-VW-PNGLTLDLATKRVYWIDAKLDHIVSCEYDGSSKRIVLSGSRQINHPFAMTLFEDYLYWTDWQNKHVLRVSKLHGENVTLLSAGVSKPMDIHAVHPLRQP 627 HSP 2 Score: 66.2402 bits (160), Expect = 4.039e-11 Identity = 41/117 (35.04%), Postives = 56/117 (47.86%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESP 453
K C QF C NG+CI CDG +C D SDE C E + + I + +CDG+ DC + D C C D++ C + CI+K+ +C+ DC D SDE P
Sbjct: 162 KNCTDSQFSCSNGQCISLAWRCDGDHDCADKSDERNCTGKTCKPFEFACANGRHCIQRKWICDGENDCGDRSDEVDCGLESCGNDRWRC-SNTSRCIAKSQVCDGRVDCPDASDEGP 277
BLAST of low-density lipoprotein receptor-like vs. Ensembl Nematostella
Match: EDO49499 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGB1]) HSP 1 Score: 303.908 bits (777), Expect = 5.656e-90 Identity = 234/711 (32.91%), Postives = 328/711 (46.13%), Query Frame = 1
Query: 112 QYYKRCRRFQFLC-QNGKCIPETLHCDGHDNCGDNSDE------ICDHRETFTCSDSNIILKTELCDGKADC-DNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQL------CISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG--EKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN-AHGFDIDVFEDWLYLSDWDNEKIIQIHKKT--GKQKILVSSPKPMGVKLFHQLAQPVNIENAC--INHTCQYLCLPT 2181
Q K C F C +GKCIP++ CDG +C D+SDE C +E F C++ + L + CDG+ DC D + C C+ F+C +CI + LC+ +C DGSDE N F C + CI+ + CDG +DC D SDE NC C +F C G CI K CDG DC + + NCS C P +C C + RCDG DC D SDE C +C P +E+ C+ + CI RVCD TNDCGD DE +C K NC Q+C+ +C C PGY I S + C DI+EC+ C H C N GSYKC C EG+ + + + C VG + +L++S IR++ L D+L +N T I +DFD+ K ++WT N Q S + T++ + + PVGLA DW+ L++ + I V + MR +L+ + SK R I V P+ +FWTDW + +IE MDG R +L K ++ N L LDY +YWV+A I + +RR+V + + H F I ++ + L+ SDW II I+K T G K++ + PMG+++ H QP + N C N CQ LCL T
Sbjct: 38 QQAKNCGSRHFKCVSDGKCIPKSWRCDGEMDCPDSSDEEGCVNRTCSSKE-FNCNNQCVPLSWK-CDGEKDCRPGGFDEEGCEPVTCASTYFLCPNSS-HCIPRRWLCDGLAECEDGSDEK----------------NCQKFTCAPDKFACASGGCIASRWVCDGDNDCGDNSDELNC------------------TRLTCPPTKFLCANGM---CIPKSAVCDGENDCGDMSDEPSNCSAHICDPKLEFQCAN-GRCINKKWRCDGMKDCADGSDESTCGEG-----TCRP-DEWHCIGTSRCIPLSRVCDGTNDCGDNYDEGSHCLDLDCKKK-------NCSQRCVQTPRGGECRCFPGYTI-SKDLITCKDINECSSIGRCDHFCYNTPGSYKCACDEGYVLERPH-TCKPVGPYKPWLIFSNCKDIRQVSLDGTQYDLLI--RNLTR---AISVDFDWLEKKVYWTDVRENAIYRQNYTWASSS---FATTVIRTGLAMPVGLAVDWVGRNLYFVESSVRRIYVSKLDGSMRTSLITT-DLSKPRGIAVDPRVGYLFWTDW-EAHRIERANMDGSSRVILAKTNVYWANTLTLDYTLQTVYWVEAHLDYIGAMSYDGLKRREVRHNGDIIHPFGIAIYRNELFFSDWVRHAIISINKFTGNGTTKLVSNLEVPMGLQILHPSRQPA-MPNPCSPSNCGCQQLCLVT 681
BLAST of low-density lipoprotein receptor-like vs. Ensembl Medaka
Match: ldlrb (low-density lipoprotein receptor [Source:NCBI gene;Acc:101161779]) HSP 1 Score: 375.555 bits (963), Expect = 2.352e-115 Identity = 251/731 (34.34%), Postives = 366/731 (50.07%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNI---------ILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKF--LLYSTKNSIRELRLLRH--YMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISV--YNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENACINH--TCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTC 2262
C Q C NG+C+ CDG D+CGD +DE+ + TC S + K+ CDGKADC N D K C +C D+F C CIS + +C+++NDCSDGSDE+ +KP N + FQC N +C+ ++ CDG DC+D SDE P++ K K + C +EF C G CI WRCDG DC + DELNCS C + +C SC + +C+ DC+D SDE CS +CD +EFKC + CI+ + VCDKT DC DGSDE +C N C NG C C + C C GY++ + ++ C DI+ECA+ CS C N GSYKC+C G+ + + C A LL++T++ +R++ L+ H Y+ ++ KN + +D D K ++W+ + +I L + KP T++ S I +P G+A DW+HG ++W+D ISV + RKTL+R N K R+I + P ++WTDWG KIE G++G R L+ + + +PNG+ LD LYWVD+K + N T R V++ +H F + VFED ++ +D I + TG+ ++ P + L+H L QP+ I N C + +C++LCLP K+ C CPD L D ++C
Sbjct: 30 CSSSQLKCGNGRCVTRRWICDGTDDCGDGTDELLSTCASKTCLPSQFNCGAPINQCVPKSWHCDGKADCSNGADEKNCTVKQCKNDEFRCANG--QCISLSFVCDNDNDCSDGSDET-----TCSKPTC----NPLSFQC-NNSVCVPSLWRCDGDEDCADGSDEW--PETCGGK----------KPAAKCSVSEFECANGQ---CIPGSWRCDGGIDC-DDRSDELNCSRPVCLEGQ-FQCGD-GSCLQGNLKCNSVRDCSDGSDETDCS------TACDAPSEFKC-SSGECISMENVCDKTKDCSDGSDE----PESSCGINECSTANGGCSHHCNDLKIGFNCSCPAGYKLKA-DQRNCEDINECAEADTCSQICINLPGSYKCDCEWGYKIDPVSNTCKAESGTVPALLFTTRHDVRKI-LVDHSEYVQVIPGLKNAAA------LDMDMAQKTLYWSDVS----LKKIFRLNLADSSSKPVTVIDSGIETPEGIAVDWVHGNIYWTDSTLKTISVASTDGTKRKTLIRE-NLDKPRAITIDPVNNFVYWTDWGHHAKIEKSGLNGAGRVALVTENIVSPNGITLDMVNQRLYWVDSKLHTVFSIDVNGGTRHRVVVINQRPSHPFSLTVFEDKVFWTDTGLRGIYSASRLTGRNLTQIAGDLDHPEDIILYHNLKQPIGI-NWCNSGKDSCEFLCLPAPQANTTSPKYSCACPDDMSLGPDMRSC 705 HSP 2 Score: 65.4698 bits (158), Expect = 2.632e-10 Identity = 41/121 (33.88%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEI 468
+C +F C NG+CIP + CDG +C D SDE+ R F C D + + C+ DC + D C + +F C + CIS ++C+ DCSDGSDE +C I
Sbjct: 194 AKCSVSEFECANGQCIPGSWRCDGGIDCDDRSDELNCSRPVCLEGQFQCGDGSCLQGNLKCNSVRDCSDGSDETDCSTACDAPSEFKCSSG--ECISMENVCDKTKDCSDGSDEPESSCGI 312
BLAST of low-density lipoprotein receptor-like vs. Ensembl Medaka
Match: lrp8 (low-density lipoprotein receptor-related protein 8 [Source:NCBI gene;Acc:101167610]) HSP 1 Score: 365.54 bits (937), Expect = 7.141e-111 Identity = 249/736 (33.83%), Postives = 363/736 (49.32%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE---ICDHR----ETFTC--SDSNIILKTELCDGKADCDNDEDPKICVKNK--CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS--HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIE----NACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCS 2265
K C F C+NG+C+P CDG C D SDE IC + E F C + S + + CDG+ DC+N D + C + C+ F CR CI T +C+ +NDC D SDE E + P Q F+C N + CI ++ CDG DC D+SDE S + Q C EF CG+G C+ W+CDG DC + DE NC C PD+ +C +C ++C+ DC D SDE C N ++ CD +F+C KN CI +VCD DC D SDE P + C N C NNG C C + +C C GY++ +++ C DIDEC + CS C NY G YKCEC+EG+ M +K C AVG +L+++ ++ IR + LLR Y ++ + KN + +D D + +FW + +I ++K + + + +HSP GLA DW+H ++W+D ISV RK L+ S+ R+I V P ++W+DWG+ KIE GM+G DR+VL+ D + PNG+ LD LYWVD+K +S +L R+ ++S H H F + VFED ++ +D + E I +++ TG K+ P+ + +FH+ QP + + N C+YLCL ++ K+ C CPD L D + C+
Sbjct: 13 KTCATTDFTCKNGQCLPSKWRCDGEPECADGSDEADAICSRQTCPPEKFDCGGAASKCVSLSWRCDGERDCENGADEEQCAADAKACASKDFQCRNG--KCIGPTFVCDGDNDCGDSSDE-----EKCSSPTCGQ----HEFRCNNSE-CIPALWSCDGDPDCKDKSDE----------SAERCSRGKEPQKPRCPVGEFQCGSGE---CVHMNWKCDGDADCKDK-SDEANCPLLTCRPDE-FQCGD-GTCIHGTKQCNKVHDCPDYSDEAGCVNITK----CDGPRKFRC-KNGECIDSSKVCDNVKDCKDWSDEPP----KECGLNECADNNGGCSHICRDRRIGHECDCPSGYKL--LDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPASKTCKAVGNSPYLMFTNRHEIRRIDLLRSEYTQVVPTLKNA------VALDVDVSTNKMFWCDLY-HRKIYSA--YINKASDSSQQVTLIDSLHSPEGLAVDWVHKNIYWTDSGNKSISVATGDGRKRKVLIAT-ELSEPRAIAVDPHQGFMYWSDWGEHAKIEKAGMNGVDRQVLVSDHIEWPNGITLDLSNRRLYWVDSKLHLLSSVDLSGGNRKVLLSSHHHLGHPFALTVFEDRVFWTDLEEEAIYSVNRLTGHDVAKVAEDLNNPLDLVVFHEQRQPKAPDTCNMGSLPNGGCEYLCLKAPQITDHSPKYTCACPDGMELGPDMRRCA 699
BLAST of low-density lipoprotein receptor-like vs. Ensembl Medaka
Match: vldlr (very low density lipoprotein receptor [Source:NCBI gene;Acc:100125475]) HSP 1 Score: 361.688 bits (927), Expect = 3.549e-110 Identity = 261/861 (30.31%), Postives = 399/861 (46.34%), Query Frame = 1
Query: 124 RCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTCSDSNIILKTELCDGKADCDN--DEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSI----HFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQ-------------------------SLADLVKQSTI---CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLN--AHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSS--PKPMGVKLFHQLAQPVNIENAC----INHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQL 2559
C QF C NG+CIP CDG D+C D SDE ++T F C + + K CDG+ DC++ DE +IC C +++F C CI + C+ DC +G DE V C N F C + + CIS+ + C+ + DC D SDE +C S S+ Q SL+ + T C ++E C +G CI K+WRCDG DC + DE NC C PD+ +C+ SC ++C+G DCTD SDE C N SQ C +FKC ++ CI +VC+K DC D SDE + C+ N C +NNG C C + +C C PG ++ I+ C DI+EC + +CS C N G YKCEC G+ M C AVG E L+++ + +R L L R Y ++ +N + +D D+ + IFW + ++ K G++ V + +PVG+A DWI+ +W+D+ ISV N ++K L G SI V P ++W+DWG+ KIE GM+G DR+VL++ + PNG+ LD LYWVD+K + +L R+ V+ AH F + VFED ++ +D +N+ I +K +G + ++S P + ++H+L Q ++ N C +N C ++CLP ++ K+ C+CP+ L DG C P + + ++ + + V + V G +RN+ R +++ NF+NP Y + +L I + + Y +
Sbjct: 32 ECETNQFQCGNGRCIPSIWQCDGEDDCTDGSDEKSCVQKTCAEVDFVCRNGQCVPKRWHCDGEPDCEDGSDESLEICHMRTCRVNEFSCGAGTTQCIPVSWKCDGEKDCDNGDDE-------------VNCGNITCSPSEFTCTSGR-CISQNFVCNSEDDCGDGSDEVDCAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESLSRCGRHPTPPAKCSSSEMQCLSGE---CIHKKWRCDGDPDCKDG-SDEANCPVRTCGPDQ-FKCED-GSCIPGSRQCNGIRDCTDGSDEVDCKNLSQ----CSGPEKFKC-RSGECIDMSKVCNKVRDCPDWSDE----PIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQL--IDHKTCGDINECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDVRRLGLERKEYTQIVKQQRNA------VALDADFNQQTIFWADLG---QKAIFSTVLDKRGDVGTHKTVIENVQTPVGIAVDWIYRNFYWTDLGTKTISVSNFNGTIQKVLFNQGLKEPA-SIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSPEYLAHPFALTVFEDRVFWTDGENQAIYGANKFSGSDVVTLASNLNDPQDIIVYHELIQ-LSGTNWCTERGVNGGCSFMCLPAPQVNKHSPKYTCVCPEGQELAADGFRCRPEANGSTSIQVDSTARGSAGAWAILPVL------------LLAVAGAAGYLTWRNWQLRN-QKSMNFDNPVYLKTTEEDLNIDITRHGANVGHTYPAI 837
BLAST of low-density lipoprotein receptor-like vs. Ensembl Medaka
Match: lrp8 (low-density lipoprotein receptor-related protein 8 [Source:NCBI gene;Acc:101167610]) HSP 1 Score: 364.77 bits (935), Expect = 4.474e-110 Identity = 249/736 (33.83%), Postives = 363/736 (49.32%), Query Frame = 1
Query: 121 KRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDE---ICDHR----ETFTC--SDSNIILKTELCDGKADCDNDEDPKICVKNK--CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS--HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIE----NACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCS 2265
K C F C+NG+C+P CDG C D SDE IC + E F C + S + + CDG+ DC+N D + C + C+ F CR CI T +C+ +NDC D SDE E + P Q F+C N + CI ++ CDG DC D+SDE S + Q C EF CG+G C+ W+CDG DC + DE NC C PD+ +C +C ++C+ DC D SDE C N ++ CD +F+C KN CI +VCD DC D SDE P + C N C NNG C C + +C C GY++ +++ C DIDEC + CS C NY G YKCEC+EG+ M +K C AVG +L+++ ++ IR + LLR Y ++ + KN + +D D + +FW + +I ++K + + + +HSP GLA DW+H ++W+D ISV RK L+ S+ R+I V P ++W+DWG+ KIE GM+G DR+VL+ D + PNG+ LD LYWVD+K +S +L R+ ++S H H F + VFED ++ +D + E I +++ TG K+ P+ + +FH+ QP + + N C+YLCL ++ K+ C CPD L D + C+
Sbjct: 80 KTCATTDFTCKNGQCLPSKWRCDGEPECADGSDEADAICSRQTCPPEKFDCGGAASKCVSLSWRCDGERDCENGADEEQCAADAKACASKDFQCRNG--KCIGPTFVCDGDNDCGDSSDE-----EKCSSPTCGQ----HEFRCNNSE-CIPALWSCDGDPDCKDKSDE----------SAERCSRGKEPQKPRCPVGEFQCGSGE---CVHMNWKCDGDADCKDK-SDEANCPLLTCRPDE-FQCGD-GTCIHGTKQCNKVHDCPDYSDEAGCVNITK----CDGPRKFRC-KNGECIDSSKVCDNVKDCKDWSDEPP----KECGLNECADNNGGCSHICRDRRIGHECDCPSGYKL--LDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPASKTCKAVGNSPYLMFTNRHEIRRIDLLRSEYTQVVPTLKNA------VALDVDVSTNKMFWCDLY-HRKIYSA--YINKASDSSQQVTLIDSLHSPEGLAVDWVHKNIYWTDSGNKSISVATGDGRKRKVLIAT-ELSEPRAIAVDPHQGFMYWSDWGEHAKIEKAGMNGVDRQVLVSDHIEWPNGITLDLSNRRLYWVDSKLHLLSSVDLSGGNRKVLLSSHHHLGHPFALTVFEDRVFWTDLEEEAIYSVNRLTGHDVAKVAEDLNNPLDLVVFHEQRQPKAPDTCNMGSLPNGGCEYLCLKAPQITDHSPKYTCACPDGMELGPDMRRCA 766
BLAST of low-density lipoprotein receptor-like vs. Ensembl Medaka
Match: lrp8 (low-density lipoprotein receptor-related protein 8 [Source:NCBI gene;Acc:101167610]) HSP 1 Score: 345.51 bits (885), Expect = 2.371e-103 Identity = 250/732 (34.15%), Postives = 364/732 (49.73%), Query Frame = 1
Query: 127 CRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRET-----FTC--SDSNIILKTELCDGKADCDNDEDPKICVKNK--CSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVG-EKFLLYSTKNSIRELRLLR-HYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVS--HLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGK--QKILVSSPKPMGVKLFHQLAQPVNIE----NACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCS 2265
C QF C NG+CIP CD D+C DNSDE R+T F C + S + + CDG+ DC+N D + C + C+ F CR CI T +C+ +NDC D SDE E + P Q + F+C N + CI ++ CDG DC D+SDE S + Q C EF CG+G C+ W+CDG DC + DE NC C PD+ +C +C ++C+ DC D SDE C N ++ CD +F+C KN CI +VCD DC D SDE P + C N C NNG C C + +C C GY++ +++ C DIDEC + CS C NY G YKCEC+EG+ M +K C AVG +L+++ ++ IR + LLR Y ++ + KN + +D D + +FW + +I ++K + + + +HSP GLA DW+H ++W+D ISV RK L+ S+ R+I V P ++W+DWG+ KIE GM+G DR+VL+ D + PNG+ LD LYWVD+K +S +L R+ ++S H H F + VFED ++ +D + E I +++ TG K+ P+ + +FH+ QP + + N C+YLCL ++ K+ C CPD L D + C+
Sbjct: 43 CETGQFQCSNGRCIPSLWRCDDDDDCSDNSDEENCRRQTCPPEKFDCGGAASKCVSLSWRCDGERDCENGADEEQCAADAKACASKDFQCRNG--KCIGPTFVCDGDNDCGDSSDE-----EKCSSPTCGQHE----FRCNNSE-CIPALWSCDGDPDCKDKSDE----------SAERCSRGKEPQKPRCPVGEFQCGSGE---CVHMNWKCDGDADCKDK-SDEANCPLLTCRPDE-FQCGD-GTCIHGTKQCNKVHDCPDYSDEAGCVNITK----CDGPRKFRC-KNGECIDSSKVCDNVKDCKDWSDEPP----KECGLNECADNNGGCSHICRDRRIGHECDCPSGYKL--LDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPASKTCKAVGNSPYLMFTNRHEIRRIDLLRSEYTQVVPTLKNA------VALDVDVSTNKMFWCDLY-HRKIYSA--YINKASDSSQQVTLIDSLHSPEGLAVDWVHKNIYWTDSGNKSISVATGDGRKRKVLIAT-ELSEPRAIAVDPHQGFMYWSDWGEHAKIEKAGMNGVDRQVLVSDHIEWPNGITLDLSNRRLYWVDSKLHLLSSVDLSGGNRKVLLSSHHHLGHPFALTVFEDRVFWTDLEEEAIYSVNRLTGHDVAKVAEDLNNPLDLVVFHEQRQPKAPDTCNMGSLPNGGCEYLCLKAPQITDHSPKYTCACPDGMELGPDMRRCA 725
BLAST of low-density lipoprotein receptor-like vs. Planmine SMEST
Match: SMESG000013396.1 (SMESG000013396.1) HSP 1 Score: 1665.97 bits (4313), Expect = 0.000e+0 Identity = 852/860 (99.07%), Postives = 858/860 (99.77%), Query Frame = 1
Query: 55 MKYXXXXXXXXXXXXXXXXQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTIXXXXXXLKPKQSRVNVYXXXXXXXXXXXXXXXXXXXXXXAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLIPQNQSDGGLQMVATN 2634
MKYLLISCLV SIVCVVSSQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSL DLVKQSTICQNNEFYCG+GSTVPCIAKEWRCDGSYDCPETY+DELNC+NFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDE+FCSNPSQH+VSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLV+SRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTISVSSSSLKPKQSRVNVYLIVGLVITIVLLISLVLVGLGIAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLIPQNQSDGGLQMVATN
Sbjct: 1 MKYLLISCLVFSIVCVVSSQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCGDNSDEICDHRETFTCSDSNIILKTELCDGKADCDNDEDPKICVKNKCSIDQFMCRTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLTDLVKQSTICQNNEFYCGSGSTVPCIAKEWRCDGSYDCPETYRDELNCTNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEKFCSNPSQHDVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDECADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVHSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQKILVSSPKPMGVKLFHQLAQPVNIENACINHTCQYLCLPTSMNLENYIKFRCICPDFSYLLNDGKTCSPTKSEFFRKTISVSSSSLKPKQSRVNVYLIVGLVITIVLLISLVLVGLGIAMYRNYIRRVIKRATNFNNPTYYQHKNSNLEIQLFNEDPVMSDIYDQLPDSSHANSLIPQNQSDGGLQMVATN 860
BLAST of low-density lipoprotein receptor-like vs. Planmine SMEST
Match: SMESG000034068.1 (SMESG000034068.1) HSP 1 Score: 249.98 bits (637), Expect = 6.257e-71 Identity = 183/568 (32.22%), Postives = 281/568 (49.47%), Query Frame = 1
Query: 646 DLVKQSTICQNNEFY-CGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNV-SCDPFNEFKCVKNN-TCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCK-INNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDEC-ADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQ-CLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPK-NPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSP------VGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE---PKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQR-RDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSSPKPMGVKLFHQLAQPVNIEN-----ACIN---HTCQYLCLP---TSMNLENYIKFRCICPDFSYLLNDGKTC 2262
D+V + C ++++ C + V CI+K+W CDG+ DC E+ KDE NC C ++ C + C CDG C D SDE C +H + SCD ++F C K+ CI VCDK N+CG DE PG +NC +N CK I NG C C NF+++ KC C GY++ N T C+DIDEC A C+ C N GSY+C C++G+ ++ N + C+ + T N R+L + + Y P N + + I +D + +FW Q + N ++ Q + K R L + + +++DW+ GLLFW+ I V N T+ + L+ G + RSI V P ++W D G + P+IE + M+ +R+VL+ L P L +D LYW D I+ NL T + ++S+ + F I VFE+ ++ +DW +II I K T +L KP+ +++ +++ QP E+ AC+ H C ++CLP S+N K++C+CP S L D TC
Sbjct: 14 DVVLGNENCTSSDYLNCEDINAVNCISKDWWCDGNQDC-ESGKDESNCPPKVCLENEF-LCHSGTQCIPKLLLCDGTFHCVDKSDERNCM---KHEIKSCDSISQFDCNKDGEICIPISEVCDKKNNCGRNQDEEPGNSVDNCQRNDCKLIPNGGCSHFCTNFFTYIKCHCPLGYKLQPDNRT-CVDIDECSASPSKCNQICKNTPGSYECSCYDGYRQNQHNSEYCITKEGDRSILITLNGGRQLMIDLNTGSHFYKPLYNSHESLVNIDVDLHQSPQTMFWIQ-QSNGKLGQSKIDLKVNNIEKYRFLNHKNLSDDHIGQLCTDMSFDWLRGLLFWTSSIEKIIYVTNTTSNVTSVLLNQGLENP-RSIAVDPINTGVYWIDLGTKKSSPRIEMVLMNTDNRRVLVSKNLRQPLDLLIDLQERKLYWSDIDPGSINFINLDTPNNPKTIISNKLLYPFSIAVFENNIFWTDWRQNQIISIDKITSDSYTVLAKVVKPLAIQVLNKVIQPKIHESDVTSHACLKNRMHGCSHICLPFPSNSINPNEGPKYKCLCPKDSKLQGDKLTC 573
BLAST of low-density lipoprotein receptor-like vs. Planmine SMEST
Match: SMESG000034068.1 (SMESG000034068.1) HSP 1 Score: 249.595 bits (636), Expect = 6.449e-71 Identity = 183/568 (32.22%), Postives = 281/568 (49.47%), Query Frame = 1
Query: 646 DLVKQSTICQNNEFY-CGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNV-SCDPFNEFKCVKNN-TCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCK-INNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDEC-ADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQ-CLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPK-NPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSP------VGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE---PKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQR-RDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSSPKPMGVKLFHQLAQPVNIEN-----ACIN---HTCQYLCLP---TSMNLENYIKFRCICPDFSYLLNDGKTC 2262
D+V + C ++++ C + V CI+K+W CDG+ DC E+ KDE NC C ++ C + C CDG C D SDE C +H + SCD ++F C K+ CI VCDK N+CG DE PG +NC +N CK I NG C C NF+++ KC C GY++ N T C+DIDEC A C+ C N GSY+C C++G+ ++ N + C+ + T N R+L + + Y P N + + I +D + +FW Q + N ++ Q + K R L + + +++DW+ GLLFW+ I V N T+ + L+ G + RSI V P ++W D G + P+IE + M+ +R+VL+ L P L +D LYW D I+ NL T + ++S+ + F I VFE+ ++ +DW +II I K T +L KP+ +++ +++ QP E+ AC+ H C ++CLP S+N K++C+CP S L D TC
Sbjct: 14 DVVLGNENCTSSDYLNCEDINAVNCISKDWWCDGNQDC-ESGKDESNCPPKVCLENE-FLCHSGTQCIPKLLLCDGTFHCVDKSDERNCM---KHEIKSCDSISQFDCNKDGEICIPISEVCDKKNNCGRNQDEEPGNSVDNCQRNDCKLIPNGGCSHFCTNFFTYIKCHCPLGYKLQPDNRT-CVDIDECSASPSKCNQICKNTPGSYECSCYDGYRQNQHNSEYCITKEGDRSILITLNGGRQLMIDLNTGSHFYKPLYNSHESLVNIDVDLHQSPQTMFWIQ-QSNGKLGQSKIDLKVNNIEKYRFLNHKNLSDDHIGQLCTDMSFDWLRGLLFWTSSIEKIIYVTNTTSNVTSVLLNQGLENP-RSIAVDPINTGVYWIDLGTKKSSPRIEMVLMNTDNRRVLVSKNLRQPLDLLIDLQERKLYWSDIDPGSINFINLDTPNNPKTIISNKLLYPFSIAVFENNIFWTDWRQNQIISIDKITSDSYTVLAKVVKPLAIQVLNKVIQPKIHESDVTSHACLKNRMHGCSHICLPFPSNSINPNEGPKYKCLCPKDSKLQGDKLTC 573
BLAST of low-density lipoprotein receptor-like vs. Planmine SMEST
Match: SMESG000034068.1 (SMESG000034068.1) HSP 1 Score: 249.595 bits (636), Expect = 6.514e-71 Identity = 183/568 (32.22%), Postives = 281/568 (49.47%), Query Frame = 1
Query: 646 DLVKQSTICQNNEFY-CGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNV-SCDPFNEFKCVKNN-TCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCK-INNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDEC-ADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQ-CLAVGEKFLLYSTKNSIRELRLLRHYMDMLYSPK-NPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSP------VGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE---PKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVDAKTRKISVYNLKTFQR-RDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSSPKPMGVKLFHQLAQPVNIEN-----ACIN---HTCQYLCLP---TSMNLENYIKFRCICPDFSYLLNDGKTC 2262
D+V + C ++++ C + V CI+K+W CDG+ DC E+ KDE NC C ++ C + C CDG C D SDE C +H + SCD ++F C K+ CI VCDK N+CG DE PG +NC +N CK I NG C C NF+++ KC C GY++ N T C+DIDEC A C+ C N GSY+C C++G+ ++ N + C+ + T N R+L + + Y P N + + I +D + +FW Q + N ++ Q + K R L + + +++DW+ GLLFW+ I V N T+ + L+ G + RSI V P ++W D G + P+IE + M+ +R+VL+ L P L +D LYW D I+ NL T + ++S+ + F I VFE+ ++ +DW +II I K T +L KP+ +++ +++ QP E+ AC+ H C ++CLP S+N K++C+CP S L D TC
Sbjct: 14 DVVLGNENCTSSDYLNCEDINAVNCISKDWWCDGNQDC-ESGKDESNCPPKVCLENE-FLCHSGTQCIPKLLLCDGTFHCVDKSDERNCM---KHEIKSCDSISQFDCNKDGEICIPISEVCDKKNNCGRNQDEEPGNSVDNCQRNDCKLIPNGGCSHFCTNFFTYIKCHCPLGYKLQPDNRT-CVDIDECSASPSKCNQICKNTPGSYECSCYDGYRQNQHNSEYCITKEGDRSILITLNGGRQLMIDLNTGSHFYKPLYNSHESLVNIDVDLHQSPQTMFWIQ-QSNGKLGQSKIDLKVNNIEKYRFLNHKNLSDDHIGQLCTDMSFDWLRGLLFWTSSIEKIIYVTNTTSNVTSVLLNQGLENP-RSIAVDPINTGVYWIDLGTKKSSPRIEMVLMNTDNRRVLVSKNLRQPLDLLIDLQERKLYWSDIDPGSINFINLDTPNNPKTIISNKLLYPFSIAVFENNIFWTDWRQNQIISIDKITSDSYTVLAKVVKPLAIQVLNKVIQPKIHESDVTSHACLKNRMHGCSHICLPFPSNSINPNEGPKYKCLCPKDSKLQGDKLTC 573
BLAST of low-density lipoprotein receptor-like vs. Planmine SMEST
Match: SMESG000062507.1 (SMESG000062507.1) HSP 1 Score: 157.147 bits (396), Expect = 1.120e-39 Identity = 146/543 (26.89%), Postives = 239/543 (44.01%), Query Frame = 1
Query: 670 CQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKC--VKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKCINFYSHRKCLCKPGYRIDSINETKCIDIDEC-ADHMVCSHKCANYLGSYKCECFEGFYMSKDNKQCLAVGEK---------------FLLYSTKNSIRELRLLRHYMDMLYSPKNPTSNFLPIGIDFDYKSKNIFWTQFEPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSDIHFNEISVLNITNGMRKTLVRLGNHSKVRSIVVHPKYRRIFWTDWGKE---PKIECMGMDGQDRKVLIKDGLWTPNGLALDYYFDDLYWVD--------AKTRKISVYNLKTFQRRDVVSHLNAHGFDIDVFEDWLYLSDWDNEKIIQIHKKTGKQ-KILVSSPKPMGVKLF-----HQLAQPVN---IENAC--INHTCQYLCLP 2178
C ++ YCG S CI+K W CD + DC + DE+NC C ++ +C D C ++ CDG DC +N DE C+N + SC+ + C K CI + +C+ +C D ENC + CK + C CIN YS C C P + N C I++C + VC C + SY C C++G+ ++++++C+ E+ +++ + + R D+ N N + +K + ++ + P + +D +S N + + + S A D LLF++D + + I V+N+T+ + +V + +IV+ P R+FW D G E PKI+ MDG + L++ + P LA+D LYW D +S N+KTF V++ H F I +F + +Y SD KI HK TGK K++ KP+ +++ QL + +N I C + +TC+ CLP
Sbjct: 21 CLQDDHYCGKNSFFQCISKLWVCDYNQDCDDN-SDEVNCPPMICDKNQF-KCPDSDLCIPREKLCDGVNDCIENEDEWNCTNIN----SCNEKTHYNCGNTKKLECIKIEDICNTNINCSTNKDSL-----ENCKADFCKTSENTCSHICINKYSSFTCDCPPDMELSEDNRN-CKHINKCFKNPEVCHQGCQDNGKSYNCFCYDGY--TENDQKCVPTTEENEINLLYSSFSSIYSVSIFNLNPHYKAKEIFRGQDDIFSLDVNLNRNEMVFYSSLVHKDNVLQVSKLQNWP--LNVDLYLSSISNKQNIEMNLKNL-SAFSTALDPARNLLFFTDYNDSSIYVMNLTSFDKIKIVDKDCYFPF-NIVIDPVMGRLFWIDLGNENNGPKIKMANMDGSFQYTLLEKEIKKPKFLAIDIEEQRLYWTDHFPSAIKYIDINSLSQLNIKTFS---VLAIEYFHPFSIFIFGNRIYWSDLKEHKIYSAHKITGKDVKVIDKRVKPINLRIISKESNRQLIKKINEHKIGKYCSGVINTCRGSCLP 542 HSP 2 Score: 60.8474 bits (146), Expect = 3.695e-9 Identity = 140/546 (25.64%), Postives = 202/546 (37.00%), Query Frame = 1
Query: 343 KCSIDQFMC-RTKPMNCISKTSLCNHNNDCSDGSDESPEACEIINKPLVVQCDNSIHFQCENKQLCISRIYYCDGKSDCSDQSDEKNCPDSENSKSKSQSLADLVKQSTICQNNEFYCGAGSTVPCIAKEWRCDGSYDCPETYKDELNCSNFECSPDKPNRCKTIDSCYDNDQRCDGYPDCTDNSDEEFCSNPSQHNVSCDPFNEFKCVKNNTCIAFQRVCDKTNDCGDGSDERPGGKSENCDKNLCKINNGNCEQKC--------INFYSHRKCL--------CKPGYRIDSI----NETKCIDIDECADHMV----CSHKCANYLGSYKCECF----EGFYMSKDNKQCLAVGEKFL-LYSTK-NSIRELRLLRHYMDMLYSPKNPTSN----------FLPIGIDFDYKSKNIFWTQF--EPNPEIVQIDHLVSKTGNMKPRTLVYSRIHSPVGLAYDWIHGLLFWSD--------IHFNEISVLNITNGMRKTLVRLG-NHSKVRSIVVHPKYRRIFWTDWGKEPKIECMGMDGQDRKVLIK 1824
KC D C + CISK +C++N DC D SDE +N P ++ CD + F+C + LCI R CDG +DC + DE NC + + K+ + CG + CI E C+ + +C T KD L CK D C ++ C C + C P +S D N C N C VC + C D GKS NC C +QKC IN P Y+ I ++ +D++ + MV HK N L K + + + + S NKQ + + K L +ST + R L Y D N TS + P I D +FW E N +++ ++ G+ + TL+ I P LA D L+W+D I N +S LNI KT L + SI + RI+W+D + + G+D KV+ K
Sbjct: 20 KCLQDDHYCGKNSFFQCISKLWVCDYNQDCDDNSDE-------VNCPPMI-CDKN-QFKCPDSDLCIPREKLCDGVNDCIENEDEWNCTNINSCNEKTH----------------YNCGNTKKLECIKIEDICNTNINC-STNKDSL------------ENCKA-DFCKTSENTCSHI--CINKYSSFTCDCPPDMELSEDNRN---CKHINKCFKNPEVCHQG--CQD------NGKSYNC---FCYDGYTENDQKCVPTTEENEINLLYSSFSSIYSVSIFNLNPHYKAKEIFRGQDDIFSLDVNLNRNEMVFYSSLVHK-DNVLQVSKLQNWPLNVDLYLSSISNKQNIEMNLKNLSAFSTALDPARNLLFFTDYNDSSIYVMNLTSFDKIKIVDKDCYFPFNIVIDPVMGRLFWIDLGNENNGPKIKMANM---DGSFQ-YTLLEKEIKKPKFLAIDIEEQRLYWTDHFPSAIKYIDINSLSQLNI-----KTFSVLAIEYFHPFSIFIFG--NRIYWSDLKEHKIYSAHKITGKDVKVIDK 498 The following BLAST results are available for this feature:
BLAST of low-density lipoprotein receptor-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of low-density lipoprotein receptor-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of low-density lipoprotein receptor-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016312 ID=SMED30016312|Name=low-density lipoprotein receptor-like|organism=Schmidtea mediterranea sexual|type=transcript|length=2978bpback to top protein sequence of SMED30016312-orf-1 >SMED30016312-orf-1 ID=SMED30016312-orf-1|Name=SMED30016312-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=861bp MKYLLISCLVISIVCVVSSQYYKRCRRFQFLCQNGKCIPETLHCDGHDNCback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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