Homeobox protein cut-like

Overview


Name	Homeobox protein cut-like
Smed ID	SMED30016218
Length (bp)	4414

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Homeobox protein cut-like (SMED30016218) t-SNE clustered cells

Violin plots show distribution of expression levels for Homeobox protein cut-like (SMED30016218) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Homeobox protein cut-like (SMED30016218) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Homeobox protein cut-like (SMED30016218) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30016218

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30016218	h1SMcG0010220	SmedASXL_016134	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
nervous system	SMED30016218	h1SMcG0010220	dd_Smed_v4_13843_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30016218	h1SMcG0010220	dd_Smed_v4_13843_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30016218	h1SMcG0010220	dd_Smed_v4_13843_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30016218	h1SMcG0010220	dd_Smed_v4_13843_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30016218	h1SMcG0010220	dd_Smed_v4_13843_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30016218	h1SMcG0010220	Contig40158	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30016218	h1SMcG0010220	Contig40158	newmark_ests	PMID:29674431 Fincher et al., 2018
head region	SMED30016218	h1SMcG0010220	dd_Smed_v6_13843_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
head region	SMED30016218	h1SMcG0010220	OX_Smed_1.0.16133	ox_Smed_v2	PMID:24238224 Kao et al., 2013
reproductive organ	SMED30016218	h1SMcG0010220	Contig40158	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30016218	h1SMcG0010220	Contig40158	newmark_ests	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Human
Match: CUX1 (cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557])

HSP 1 Score: 147.902 bits (372), Expect = 5.752e-35
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P              +  T  +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +E+++ +LN+   T+ NWFHNYR R
Sbjct:  968 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPP-------------SVGTEYSQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSR 1140

HSP 2 Score: 87.0409 bits (214), Expect = 2.505e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  785 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 848

HSP 3 Score: 86.2705 bits (212), Expect = 3.922e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  784 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 848

HSP 4 Score: 84.3445 bits (207), Expect = 1.570e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E E++D AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  426 DVNGMAPSPSQSESAGSVSEGEEMDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 528

HSP 5 Score: 82.0333 bits (201), Expect = 7.760e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  449 MDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 512

HSP 6 Score: 81.2629 bits (199), Expect = 1.414e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct:  967 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1038

HSP 7 Score: 78.1814 bits (191), Expect = 1.274e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1493 PLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            P+  S  + P +P+    +D    T   +    +  + E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct:  922 PIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSP-ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1040

HSP 8 Score: 75.8702 bits (185), Expect = 6.455e-13
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKV--SDNGSNKIENTKP 2929
            + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L    N     S  G  + E  +P
Sbjct:  445 EGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRAEPAQP 535

HSP 9 Score: 74.3294 bits (181), Expect = 2.003e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  784 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 847

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Human
Match: CUX1 (cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557])

HSP 1 Score: 147.902 bits (372), Expect = 6.476e-35
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P              +  T  +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +E+++ +LN+   T+ NWFHNYR R
Sbjct: 1104 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPP-------------SVGTEYSQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSR 1276

HSP 2 Score: 87.0409 bits (214), Expect = 2.705e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  921 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 984

HSP 3 Score: 86.2705 bits (212), Expect = 4.269e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  920 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 984

HSP 4 Score: 84.7297 bits (208), Expect = 1.238e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E E++D AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  528 DVNGMAPSPSQSESAGSVSEGEEMDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 630

HSP 5 Score: 82.0333 bits (201), Expect = 7.808e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  551 MDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 614

HSP 6 Score: 80.8777 bits (198), Expect = 1.698e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1103 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1174

HSP 7 Score: 78.5666 bits (192), Expect = 1.018e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1493 PLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            P+  S  + P +P+    +D    T   +    +  + E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1058 PIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSP-ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1176

HSP 8 Score: 74.3294 bits (181), Expect = 1.625e-12
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  547 EGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 614

HSP 9 Score: 74.3294 bits (181), Expect = 1.940e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  920 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 983

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Human
Match: CUX1 (cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557])

HSP 1 Score: 147.902 bits (372), Expect = 6.801e-35
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P              +  T  +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +E+++ +LN+   T+ NWFHNYR R
Sbjct: 1070 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPP-------------SVGTEYSQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSR 1242

HSP 2 Score: 86.6557 bits (213), Expect = 2.753e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  887 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 950

HSP 3 Score: 86.2705 bits (212), Expect = 4.308e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  886 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 950

HSP 4 Score: 84.7297 bits (208), Expect = 1.303e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E E++D AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  528 DVNGMAPSPSQSESAGSVSEGEEMDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 630

HSP 5 Score: 82.0333 bits (201), Expect = 8.018e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  551 MDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 614

HSP 6 Score: 80.8777 bits (198), Expect = 1.730e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1069 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1140

HSP 7 Score: 78.5666 bits (192), Expect = 1.020e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1493 PLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            P+  S  + P +P+    +D    T   +    +  + E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1024 PIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSP-ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1142

HSP 8 Score: 75.485 bits (184), Expect = 7.299e-13
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKV--SDNGSNKIENTKP 2929
            + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L    N     S  G  + E  +P
Sbjct:  547 EGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRAEPAQP 637

HSP 9 Score: 74.3294 bits (181), Expect = 2.011e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  886 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 949

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Human
Match: CUX1 (cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557])

HSP 1 Score: 147.517 bits (371), Expect = 7.169e-35
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P              +  T  +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +E+++ +LN+   T+ NWFHNYR R
Sbjct:  979 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPP-------------SVGTEYSQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSR 1151

HSP 2 Score: 86.6557 bits (213), Expect = 2.805e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  796 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 859

HSP 3 Score: 86.2705 bits (212), Expect = 4.104e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  795 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 859

HSP 4 Score: 84.3445 bits (207), Expect = 1.642e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E E++D AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  437 DVNGMAPSPSQSESAGSVSEGEEMDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 539

HSP 5 Score: 82.0333 bits (201), Expect = 8.397e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  460 MDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 523

HSP 6 Score: 81.2629 bits (199), Expect = 1.530e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct:  978 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1049

HSP 7 Score: 77.7962 bits (190), Expect = 1.414e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1493 PLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            P+  S  + P +P+    +D    T   +    +  + E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct:  933 PIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSP-ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1051

HSP 8 Score: 75.485 bits (184), Expect = 6.924e-13
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKV--SDNGSNKIENTKP 2929
            + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L    N     S  G  + E  +P
Sbjct:  456 EGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRAEPAQP 546

HSP 9 Score: 73.9442 bits (180), Expect = 2.185e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  795 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 858

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Human
Match: CUX1 (cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557])

HSP 1 Score: 147.517 bits (371), Expect = 7.234e-35
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P              +  T  +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +E+++ +LN+   T+ NWFHNYR R
Sbjct: 1137 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPP-------------SVGTEYSQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSR 1309

HSP 2 Score: 86.6557 bits (213), Expect = 2.890e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  954 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1017

HSP 3 Score: 86.2705 bits (212), Expect = 4.373e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  953 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1017

HSP 4 Score: 84.7297 bits (208), Expect = 1.268e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E E++D AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  539 DVNGMAPSPSQSESAGSVSEGEEMDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 641

HSP 5 Score: 83.1889 bits (204), Expect = 3.675e-15
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  562 MDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 651

HSP 6 Score: 80.8777 bits (198), Expect = 1.695e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1136 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1207

HSP 7 Score: 78.5666 bits (192), Expect = 1.024e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1493 PLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            P+  S  + P +P+    +D    T   +    +  + E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1091 PIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSP-ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1209

HSP 8 Score: 74.7146 bits (182), Expect = 1.580e-12
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  558 EGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 625

HSP 9 Score: 74.3294 bits (181), Expect = 2.053e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  953 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 1016

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Celegans
Match: ceh-44 (Homeobox protein cut-like ceh-44 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL02])

HSP 1 Score: 86.2705 bits (212), Expect = 1.672e-16
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            ++T  LV  IKE LT NSISQR FG  +LGLSQGS+SD+L+RPK W+ LT KGREP+IRM  ++
Sbjct:  841 LDTDFLVKQIKEFLTMNSISQRQFGEYILGLSQGSVSDLLARPKTWAQLTQKGREPFIRMQLFM 904

HSP 2 Score: 84.3445 bits (207), Expect = 6.155e-16
Identity = 38/85 (44.71%), Postives = 63/85 (74.12%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNL---SQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGF 1879
            L+ TE+A+  + ++  ++IGQRLFAKHV+N    SQG++SELLSKP+ W+KL++KGR+++R++  W  D   +  L S++PR+ +
Sbjct:  600 LNTTEIASHCKRLMIAYNIGQRLFAKHVMNQVVKSQGSLSELLSKPRHWNKLTDKGREAFRRIYGWISDDEAINLLCSLSPRRVW 684

HSP 3 Score: 81.2629 bits (199), Expect = 5.600e-15
Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            LDT  +   ++E L  N++ Q+ FGE IL LSQGSVS+LL++PK W QL+ KG+EP++RMQL++
Sbjct:  841 LDTDFLVKQIKEFLTMNSISQRQFGEYILGLSQGSVSDLLARPKTWAQLTQKGREPFIRMQLFM 904

HSP 4 Score: 67.781 bits (164), Expect = 6.236e-11
Identity = 32/78 (41.03%), Postives = 53/78 (67.95%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNL---SQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLS 3514
            L+T  I++  + ++I  N+GQ+LF + ++N    SQGS+SELLSKP+ WN+L+ KG+E + R+  W+   + +N L S
Sbjct:  600 LNTTEIASHCKRLMIAYNIGQRLFAKHVMNQVVKSQGSLSELLSKPRHWNKLTDKGREAFRRIYGWISDDEAINLLCS 677

HSP 5 Score: 66.6254 bits (161), Expect = 1.489e-10
Identity = 27/66 (40.91%), Postives = 49/66 (74.24%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            LD   +  +I++ L+++SI QR F +++L LSQG+VS+LL++PK W++L++KGR+ + +M  +  D
Sbjct:  841 LDTDFLVKQIKEFLTMNSISQRQFGEYILGLSQGSVSDLLARPKTWAQLTQKGREPFIRMQLFMDD 906

HSP 6 Score: 65.855 bits (159), Expect = 2.623e-10
Identity = 53/194 (27.32%), Postives = 89/194 (45.88%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTN-KFNHKK--GRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKT 3862
            LDTF I   V+ +L  N +  ++FG+  L+ +    ++L+ + K++       K  Y RM+ +L  P  +  L+               E +  K  +  K+E+     +         +  K S  T +   N KK   R V T+ QK  L  ++    +P  E  E+IS KL++ L+T+ NWFHN+R R+K 
Sbjct:  987 LDTFEIVYQVKGILEENGISPRVFGDEYLHCTSSMCADLMIRTKSFENSKASEKLMYTRMKTFLSDPIAIPLLV---------------EKEESKETVKAKIES-----VPAPREAPRPVKRKHSSDTDDYDLNTKKPIQRTVITDYQKDTLRFVFVNEQHPSNELCEQISLKLDMSLRTVQNWFHNHRTRSKA 1160

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Celegans
Match: ceh-38 (Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720])

HSP 1 Score: 77.0258 bits (188), Expect = 5.758e-14
Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTG 3865
            + +DT  +   +   L  +++ Q +F E IL  SQG++S+LL  PK WN+L   G+E + RM  W+ QP      + +  +          E+ ++ S +SP    +         N  TH   +S+       + K+ R+VFT+ QK  L +I++    P  E  + I++ L + L T+ N+F N R R++ G
Sbjct:  309 IYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLK-SGRETFRRMYNWVAQPLATRLAILDMKT----------EDVNRASGMSPPTPAQ---------NVRTHSFRRSTSDHDGPVS-KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLG 481

HSP 2 Score: 63.929 bits (154), Expect = 7.221e-10
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD--STR--VQELKSIAPRKGFSGHYAGMSPATPIK 1921
            +D  ++  RI   L  HSI Q +FA+ +L  SQGT+S+LL  PKPW+KL + GR+++R+M  W     +TR  + ++K+    +      +GMSP TP +
Sbjct:  311 IDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKL-KSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRA-----SGMSPPTPAQ 404

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Celegans
Match: ceh-38 (Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720])

HSP 1 Score: 77.0258 bits (188), Expect = 5.875e-14
Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTG 3865
            + +DT  +   +   L  +++ Q +F E IL  SQG++S+LL  PK WN+L   G+E + RM  W+ QP      + +  +          E+ ++ S +SP    +         N  TH   +S+       + K+ R+VFT+ QK  L +I++    P  E  + I++ L + L T+ N+F N R R++ G
Sbjct:  306 IYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLK-SGRETFRRMYNWVAQPLATRLAILDMKT----------EDVNRASGMSPPTPAQ---------NVRTHSFRRSTSDHDGPVS-KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLG 478

HSP 2 Score: 63.929 bits (154), Expect = 7.011e-10
Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD--STRVQELKSIAPRKGFSGHYAGMSPATPIK 1921
            +D  ++  RI   L  HSI Q +FA+ +L  SQGT+S+LL  PKPW+KL + GR+++R+M  W     +TR+  L     +       +GMSP TP +
Sbjct:  308 IDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKL-KSGRETFRRMYNWVAQPLATRLAILDM---KTEDVNRASGMSPPTPAQ 401

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Celegans
Match: ceh-38 (Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720])

HSP 1 Score: 77.0258 bits (188), Expect = 6.547e-14
Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTG 3865
            + +DT  +   +   L  +++ Q +F E IL  SQG++S+LL  PK WN+L   G+E + RM  W+ QP      + +  +          E+ ++ S +SP    +         N  TH   +S+       + K+ R+VFT+ QK  L +I++    P  E  + I++ L + L T+ N+F N R R++ G
Sbjct:  318 IYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLK-SGRETFRRMYNWVAQPLATRLAILDMKT----------EDVNRASGMSPPTPAQ---------NVRTHSFRRSTSDHDGPVS-KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLG 490

HSP 2 Score: 63.5438 bits (153), Expect = 8.443e-10
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD--STR--VQELKSIAPRKGFSGHYAGMSPATPIK 1921
            +D  ++  RI   L  HSI Q +FA+ +L  SQGT+S+LL  PKPW+KL + GR+++R+M  W     +TR  + ++K+    +      +GMSP TP +
Sbjct:  320 IDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKL-KSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRA-----SGMSPPTPAQ 413

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Celegans
Match: ceh-38 (Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720])

HSP 1 Score: 77.0258 bits (188), Expect = 6.547e-14
Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTG 3865
            + +DT  +   +   L  +++ Q +F E IL  SQG++S+LL  PK WN+L   G+E + RM  W+ QP      + +  +          E+ ++ S +SP    +         N  TH   +S+       + K+ R+VFT+ QK  L +I++    P  E  + I++ L + L T+ N+F N R R++ G
Sbjct:  318 IYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLK-SGRETFRRMYNWVAQPLATRLAILDMKT----------EDVNRASGMSPPTPAQ---------NVRTHSFRRSTSDHDGPVS-KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLG 490

HSP 2 Score: 63.5438 bits (153), Expect = 8.443e-10
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD--STR--VQELKSIAPRKGFSGHYAGMSPATPIK 1921
            +D  ++  RI   L  HSI Q +FA+ +L  SQGT+S+LL  PKPW+KL + GR+++R+M  W     +TR  + ++K+    +      +GMSP TP +
Sbjct:  320 IDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKL-KSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRA-----SGMSPPTPAQ 413

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Fly
Match: ct (gene:FBgn0004198 transcript:FBtr0305134)

HSP 1 Score: 139.043 bits (349), Expect = 1.991e-32
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 2

Query: 3260 LFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLN--TLLSNQTSYKYKH----NCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            ++ +     +LDT  I+  ++E L+ NN+GQK+FGE +L LSQGSVSELLSKPK W+ LS KG+EP++RMQLWL   + +    LL N+     K       NQ +N S  S+      +  D+                +  +      KK R++F+E QK  L   + + PYP    +E ++ +L +  +TI NWFHN+RMR K
Sbjct: 1597 VYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSS-----NDTNDFYTSSPGPGSVGSGVGGAPPS------KKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLK 1791

HSP 2 Score: 122.865 bits (307), Expect = 1.398e-27
Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSG--HYAGMSPATPIKEDHETQEKIKRILNDAKMAM 1981
            LD   ++ R+R++LS+H+IGQRLFAK++L LSQGTVSELLSKPKPW KL+EKGRDSYRKM+ WA D   V  LKS+ P+K  SG   YAG        +D  ++++I  IL++A   M
Sbjct:  876 LDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKD-SGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLM 992

HSP 3 Score: 85.1149 bits (209), Expect = 4.741e-16
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +NT  +V  +KE L++ SISQR FG  +LGLSQGS+SD+L+RPK W +LT KGREP+IRM  +L
Sbjct: 1329 LNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFL 1392

HSP 4 Score: 83.5741 bits (205), Expect = 1.371e-15
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLW 3478
            LDT  IS  VRE+L  +N+GQ+LF + IL LSQG+VSELLSKPK W++L+ KG++ Y +M  W
Sbjct:  876 LDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAW 938

HSP 5 Score: 82.0333 bits (201), Expect = 4.315e-15
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 2

Query: 1463 TNSILNTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKS----IAPRKGF-SGHYAGMSPATP 1915
            TNS++    +P V    +TP+ P  ++   +     +M + + +      EDI            R+++ LS +SI QRLF + VL LSQG+VS+LL++PKPW  L++KGR+ + +M  + +D   V +L +    IAP K   +G Y+G SP  P
Sbjct: 1291 TNSLIT---QPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNT------EDI----------VRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSG-SPQMP 1426

HSP 6 Score: 81.6481 bits (200), Expect = 5.373e-15
Identity = 37/82 (45.12%), Postives = 60/82 (73.17%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYK 3532
            NL+T  I   V+E L   ++ Q+LFGE +L LSQGSVS+LL++PK W+ L+ KG+EP++RM+++L   + ++ L+++Q  YK
Sbjct: 1328 NLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQ--YK 1407

HSP 7 Score: 80.8777 bits (198), Expect = 1.020e-14
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELK 1855
            +LD  ++ T+I++ L  ++IGQ++F + VL LSQG+VSELLSKPKPW  LS KGR+ + +M  W  D+  V+ L+
Sbjct: 1606 DLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQ 1680

HSP 8 Score: 78.5666 bits (192), Expect = 5.319e-14
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 2

Query: 2606 NFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            N  + L   M+P  +   +L  D ++T  +   IKE L  N+I Q+ FG  +LGLSQGS+S++LS+PK W +L+ KGREP+IRM  +L   NN +
Sbjct: 1584 NAMRSLHQHMSPTVYEMAALTQD-LDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVE 1677

HSP 9 Score: 60.4622 bits (145), Expect = 1.723e-8
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 2

Query: 2657 DSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKY 2863
            D   N  ++T  +   ++E L+ ++I QR F   +LGLSQG++S++LS+PK W  LT KGR+ Y +M  +
Sbjct:  869 DKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAW 938

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Fly
Match: ct (gene:FBgn0004198 transcript:FBtr0331733)

HSP 1 Score: 138.658 bits (348), Expect = 2.527e-32
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 2

Query: 3260 LFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLN--TLLSNQTSYKYKH----NCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            ++ +     +LDT  I+  ++E L+ NN+GQK+FGE +L LSQGSVSELLSKPK W+ LS KG+EP++RMQLWL   + +    LL N+     K       NQ +N S  S+      +  D+                +  +      KK R++F+E QK  L   + + PYP    +E ++ +L +  +TI NWFHN+RMR K
Sbjct: 1606 VYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSS-----NDTNDFYTSSPGPGSVGSGVGGAPPS------KKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLK 1800

HSP 2 Score: 123.25 bits (308), Expect = 1.365e-27
Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSG--HYAGMSPATPIKEDHETQEKIKRILNDAKMAM 1981
            LD   ++ R+R++LS+H+IGQRLFAK++L LSQGTVSELLSKPKPW KL+EKGRDSYRKM+ WA D   V  LKS+ P+K  SG   YAG        +D  ++++I  IL++A   M
Sbjct:  885 LDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKD-SGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLM 1001

HSP 3 Score: 84.7297 bits (208), Expect = 6.008e-16
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +NT  +V  +KE L++ SISQR FG  +LGLSQGS+SD+L+RPK W +LT KGREP+IRM  +L
Sbjct: 1338 LNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFL 1401

HSP 4 Score: 83.1889 bits (204), Expect = 1.875e-15
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLW 3478
            LDT  IS  VRE+L  +N+GQ+LF + IL LSQG+VSELLSKPK W++L+ KG++ Y +M  W
Sbjct:  885 LDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAW 947

HSP 5 Score: 82.0333 bits (201), Expect = 4.543e-15
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 2

Query: 1463 TNSILNTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKS----IAPRKGF-SGHYAGMSPATP 1915
            TNS++    +P V    +TP+ P  ++   +     +M + + +      EDI            R+++ LS +SI QRLF + VL LSQG+VS+LL++PKPW  L++KGR+ + +M  + +D   V +L +    IAP K   +G Y+G SP  P
Sbjct: 1300 TNSLIT---QPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNT------EDI----------VRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSG-SPQMP 1435

HSP 6 Score: 81.2629 bits (199), Expect = 7.283e-15
Identity = 37/82 (45.12%), Postives = 60/82 (73.17%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYK 3532
            NL+T  I   V+E L   ++ Q+LFGE +L LSQGSVS+LL++PK W+ L+ KG+EP++RM+++L   + ++ L+++Q  YK
Sbjct: 1337 NLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQ--YK 1416

HSP 7 Score: 80.8777 bits (198), Expect = 1.003e-14
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELK 1855
            +LD  ++ T+I++ L  ++IGQ++F + VL LSQG+VSELLSKPKPW  LS KGR+ + +M  W  D+  V+ L+
Sbjct: 1615 DLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQ 1689

HSP 8 Score: 78.1814 bits (191), Expect = 6.683e-14
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 2

Query: 2606 NFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            N  + L   M+P  +   +L  D ++T  +   IKE L  N+I Q+ FG  +LGLSQGS+S++LS+PK W +L+ KGREP+IRM  +L   NN +
Sbjct: 1593 NAMRSLHQHMSPTVYEMAALTQD-LDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVE 1686

HSP 9 Score: 60.077 bits (144), Expect = 1.989e-8
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 2

Query: 2657 DSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKY 2863
            D   N  ++T  +   ++E L+ ++I QR F   +LGLSQG++S++LS+PK W  LT KGR+ Y +M  +
Sbjct:  878 DKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAW 947

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Fly
Match: ct (gene:FBgn0004198 transcript:FBtr0071068)

HSP 1 Score: 138.658 bits (348), Expect = 2.549e-32
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 2

Query: 3260 LFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLN--TLLSNQTSYKYKH----NCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            ++ +     +LDT  I+  ++E L+ NN+GQK+FGE +L LSQGSVSELLSKPK W+ LS KG+EP++RMQLWL   + +    LL N+     K       NQ +N S  S+      +  D+                +  +      KK R++F+E QK  L   + + PYP    +E ++ +L +  +TI NWFHN+RMR K
Sbjct: 1607 VYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSS-----NDTNDFYTSSPGPGSVGSGVGGAPPS------KKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLK 1801

HSP 2 Score: 122.865 bits (307), Expect = 1.400e-27
Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSG--HYAGMSPATPIKEDHETQEKIKRILNDAKMAM 1981
            LD   ++ R+R++LS+H+IGQRLFAK++L LSQGTVSELLSKPKPW KL+EKGRDSYRKM+ WA D   V  LKS+ P+K  SG   YAG        +D  ++++I  IL++A   M
Sbjct:  886 LDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKD-SGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLM 1002

HSP 3 Score: 84.7297 bits (208), Expect = 6.009e-16
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +NT  +V  +KE L++ SISQR FG  +LGLSQGS+SD+L+RPK W +LT KGREP+IRM  +L
Sbjct: 1339 LNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFL 1402

HSP 4 Score: 83.1889 bits (204), Expect = 1.891e-15
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLW 3478
            LDT  IS  VRE+L  +N+GQ+LF + IL LSQG+VSELLSKPK W++L+ KG++ Y +M  W
Sbjct:  886 LDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAW 948

HSP 5 Score: 82.0333 bits (201), Expect = 4.582e-15
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 2

Query: 1463 TNSILNTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKS----IAPRKGF-SGHYAGMSPATP 1915
            TNS++    +P V    +TP+ P  ++   +     +M + + +      EDI            R+++ LS +SI QRLF + VL LSQG+VS+LL++PKPW  L++KGR+ + +M  + +D   V +L +    IAP K   +G Y+G SP  P
Sbjct: 1301 TNSLIT---QPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNT------EDI----------VRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSG-SPQMP 1436

HSP 6 Score: 81.2629 bits (199), Expect = 7.345e-15
Identity = 37/82 (45.12%), Postives = 60/82 (73.17%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYK 3532
            NL+T  I   V+E L   ++ Q+LFGE +L LSQGSVS+LL++PK W+ L+ KG+EP++RM+++L   + ++ L+++Q  YK
Sbjct: 1338 NLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQ--YK 1417

HSP 7 Score: 80.8777 bits (198), Expect = 1.012e-14
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELK 1855
            +LD  ++ T+I++ L  ++IGQ++F + VL LSQG+VSELLSKPKPW  LS KGR+ + +M  W  D+  V+ L+
Sbjct: 1616 DLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQ 1690

HSP 8 Score: 78.1814 bits (191), Expect = 6.740e-14
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 2

Query: 2606 NFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            N  + L   M+P  +   +L  D ++T  +   IKE L  N+I Q+ FG  +LGLSQGS+S++LS+PK W +L+ KGREP+IRM  +L   NN +
Sbjct: 1594 NAMRSLHQHMSPTVYEMAALTQD-LDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVE 1687

HSP 9 Score: 60.077 bits (144), Expect = 2.006e-8
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 2

Query: 2657 DSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKY 2863
            D   N  ++T  +   ++E L+ ++I QR F   +LGLSQG++S++LS+PK W  LT KGR+ Y +M  +
Sbjct:  879 DKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAW 948

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Fly
Match: onecut (gene:FBgn0028996 transcript:FBtr0089104)

HSP 1 Score: 67.3958 bits (163), Expect = 1.055e-10
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2

Query: 1622 DPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            D  E++  ++A RI   L  +SI Q +FA+ VL  SQGT+S+LL  PKPWSKL + GR+++R+M +W Q+
Sbjct:  756 DMEEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRRMYKWLQE 824

HSP 2 Score: 53.5286 bits (127), Expect = 1.731e-6
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            +EINT  L   I   L + SI Q  F   +L  SQG++SD+L  PK WS L + GRE + RM K+L +P   ++S
Sbjct:  758 EEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS-GRETFRRMYKWLQEPEFQRMS 831

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Fly
Match: onecut (gene:FBgn0028996 transcript:FBtr0310610)

HSP 1 Score: 67.3958 bits (163), Expect = 1.055e-10
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2

Query: 1622 DPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            D  E++  ++A RI   L  +SI Q +FA+ VL  SQGT+S+LL  PKPWSKL + GR+++R+M +W Q+
Sbjct:  756 DMEEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRRMYKWLQE 824

HSP 2 Score: 53.5286 bits (127), Expect = 1.731e-6
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            +EINT  L   I   L + SI Q  F   +L  SQG++SD+L  PK WS L + GRE + RM K+L +P   ++S
Sbjct:  758 EEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS-GRETFRRMYKWLQEPEFQRMS 831

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
Match: cux1a (cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868])

HSP 1 Score: 147.902 bits (372), Expect = 3.912e-35
Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNH----KKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
              LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P  +  L+  +   K  +   +H +  +    S  LE+ +    L       H++ +   Q           KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1132 AELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSIGE----SHSLESGLSAADLTQGASPQHLSQQQPPQQMQPQQQQPQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSR 1321

HSP 2 Score: 85.8853 bits (211), Expect = 3.258e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  979 EVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 1043

HSP 3 Score: 85.1149 bits (209), Expect = 5.319e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  980 VDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 1043

HSP 4 Score: 83.1889 bits (204), Expect = 2.144e-15
Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            E+D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPWSKL+ +G++ + KM  +  D   +  L+SI  R+
Sbjct:  583 EMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLSDEQNILALRSIQGRQ 663

HSP 5 Score: 80.8777 bits (198), Expect = 1.142e-14
Identity = 38/92 (41.30%), Postives = 62/92 (67.39%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK W++L+ +GKEP+ +M+ +L   D+ N L       + + N  Q+ N+
Sbjct:  584 MDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLS--DEQNILALRSIQGRQRENPGQNLNR 673

HSP 6 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 33/75 (44.00%), Postives = 55/75 (73.33%), Query Frame = 2

Query: 1628 AELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            AELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1132 AELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKL 1206

HSP 7 Score: 78.5666 bits (192), Expect = 5.315e-14
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  P N +
Sbjct: 1133 ELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVE 1204

HSP 8 Score: 75.485 bits (184), Expect = 5.069e-13
Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 2

Query: 2651 ADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            A  + + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK WS LT +G+EP+ +M  +L
Sbjct:  575 AGSTSEGEEMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFL 647

HSP 9 Score: 68.5514 bits (166), Expect = 6.908e-11
Identity = 28/64 (43.75%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  ++  ++++ L+ + I QR+F + VL LSQG+VS++LS+PK WSKL++KGR+ + +M  W
Sbjct:  979 EVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLW 1042

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
Match: cux1a (cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868])

HSP 1 Score: 147.902 bits (372), Expect = 3.974e-35
Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNH----KKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
              LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P  +  L+  +   K  +   +H +  +    S  LE+ +    L       H++ +   Q           KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1161 AELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSIGE----SHSLESGLSAADLTQGASPQHLSQQQPPQQMQPQQQQPQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSR 1350

HSP 2 Score: 85.8853 bits (211), Expect = 3.307e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct: 1008 EVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 1072

HSP 3 Score: 85.1149 bits (209), Expect = 5.219e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct: 1009 VDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 1072

HSP 4 Score: 83.5741 bits (205), Expect = 1.983e-15
Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            E+D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPWSKL+ +G++ + KM  +  D   +  L+SI  R+
Sbjct:  583 EMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLSDEQNILALRSIQGRQ 663

HSP 5 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 38/92 (41.30%), Postives = 62/92 (67.39%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK W++L+ +GKEP+ +M+ +L   D+ N L       + + N  Q+ N+
Sbjct:  584 MDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLS--DEQNILALRSIQGRQRENPGQNLNR 673

HSP 6 Score: 78.9518 bits (193), Expect = 4.439e-14
Identity = 33/75 (44.00%), Postives = 55/75 (73.33%), Query Frame = 2

Query: 1628 AELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            AELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1161 AELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKL 1235

HSP 7 Score: 78.5666 bits (192), Expect = 5.391e-14
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  P N +
Sbjct: 1162 ELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVE 1233

HSP 8 Score: 75.485 bits (184), Expect = 4.763e-13
Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 2

Query: 2651 ADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            A  + + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK WS LT +G+EP+ +M  +L
Sbjct:  575 AGSTSEGEEMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFL 647

HSP 9 Score: 68.5514 bits (166), Expect = 6.999e-11
Identity = 28/64 (43.75%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  ++  ++++ L+ + I QR+F + VL LSQG+VS++LS+PK WSKL++KGR+ + +M  W
Sbjct: 1008 EVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLW 1071

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
Match: cux1a (cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868])

HSP 1 Score: 147.902 bits (372), Expect = 4.052e-35
Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 2

Query: 3284 VNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNH----KKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
              LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P  +  L+  +   K  +   +H +  +    S  LE+ +    L       H++ +   Q           KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1134 AELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSIGE----SHSLESGLSAADLTQGASPQHLSQQQPPQQMQPQQQQPQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSR 1323

HSP 2 Score: 85.8853 bits (211), Expect = 3.178e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  981 EVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 1045

HSP 3 Score: 85.1149 bits (209), Expect = 5.232e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  982 VDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 1045

HSP 4 Score: 83.5741 bits (205), Expect = 1.971e-15
Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            E+D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPWSKL+ +G++ + KM  +  D   +  L+SI  R+
Sbjct:  583 EMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLSDEQNILALRSIQGRQ 663

HSP 5 Score: 79.7221 bits (195), Expect = 2.507e-14
Identity = 32/64 (50.00%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK W++L+ +GKEP+ +M+ +L
Sbjct:  584 MDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFL 647

HSP 6 Score: 78.9518 bits (193), Expect = 4.197e-14
Identity = 33/75 (44.00%), Postives = 55/75 (73.33%), Query Frame = 2

Query: 1628 AELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            AELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1134 AELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKL 1208

HSP 7 Score: 78.5666 bits (192), Expect = 5.228e-14
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  P N +
Sbjct: 1135 ELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVE 1206

HSP 8 Score: 75.485 bits (184), Expect = 4.903e-13
Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 2

Query: 2651 ADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            A  + + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK WS LT +G+EP+ +M  +L
Sbjct:  575 AGSTSEGEEMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFL 647

HSP 9 Score: 68.5514 bits (166), Expect = 6.852e-11
Identity = 28/64 (43.75%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  ++  ++++ L+ + I QR+F + VL LSQG+VS++LS+PK WSKL++KGR+ + +M  W
Sbjct:  981 EVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLW 1044

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
Match: cux2b (cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176])

HSP 1 Score: 137.117 bits (344), Expect = 7.898e-32
Identity = 86/220 (39.09%), Postives = 114/220 (51.82%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQP---DKLNTL--LSNQTSYKYKHNCNQHENQSKKSA-----ISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTG---RCLTVNCTN-EHGNY 3907
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P   DKL  +  +  +   K ++      + S         ISP L                     S+L        KK R+V    +K  L   Y   PYP    +E ++ +LN+   T+ NWFHNYR R +       L  N T+ EH NY
Sbjct:  965 LDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDVKKMEKKAYLKRRYGLLSPGSDSDSPGAHSDCISPGL---------------------SALDLCPFSQAKKPRVVLAAEEKEALRKAYLQEPYPSQHTIEMLAAQLNLKTNTVINWFHNYRSRMRREVLMEGLQDNDTDAEHNNY 1163

HSP 2 Score: 86.6557 bits (213), Expect = 1.861e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  805 VDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 868

HSP 3 Score: 85.5001 bits (210), Expect = 4.261e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  804 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 869

HSP 4 Score: 82.0333 bits (201), Expect = 4.396e-15
Identity = 46/118 (38.98%), Postives = 71/118 (60.17%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMAS 1987
            LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S      +P T       + + IK IL  AK  + S
Sbjct:  451 LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPET------GSDDAIKSILEQAKKEIQS 562

HSP 5 Score: 82.0333 bits (201), Expect = 5.032e-15
Identity = 37/88 (42.05%), Postives = 60/88 (68.18%), Query Frame = 2

Query: 1598 GVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V +L+ +
Sbjct:  954 GIQELVAMSP-ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDV 1040

HSP 6 Score: 81.6481 bits (200), Expect = 6.010e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  451 LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 514

HSP 7 Score: 80.8777 bits (198), Expect = 1.182e-14
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct:  964 ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1034

HSP 8 Score: 74.7146 bits (182), Expect = 9.500e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  804 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 870

HSP 9 Score: 74.3294 bits (181), Expect = 1.183e-12
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            ++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  451 LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 514

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
Match: cux2b (cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176])

HSP 1 Score: 136.732 bits (343), Expect = 8.706e-32
Identity = 86/220 (39.09%), Postives = 114/220 (51.82%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQP---DKLNTL--LSNQTSYKYKHNCNQHENQSKKSA-----ISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTG---RCLTVNCTN-EHGNY 3907
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P   DKL  +  +  +   K ++      + S         ISP L                     S+L        KK R+V    +K  L   Y   PYP    +E ++ +LN+   T+ NWFHNYR R +       L  N T+ EH NY
Sbjct:  847 LDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDVKKMEKKAYLKRRYGLLSPGSDSDSPGAHSDCISPGL---------------------SALDLCPFSQAKKPRVVLAAEEKEALRKAYLQEPYPSQHTIEMLAAQLNLKTNTVINWFHNYRSRMRREVLMEGLQDNDTDAEHNNY 1045

HSP 2 Score: 86.6557 bits (213), Expect = 2.002e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  687 VDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 750

HSP 3 Score: 85.5001 bits (210), Expect = 4.708e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  686 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 751

HSP 4 Score: 82.4185 bits (202), Expect = 3.681e-15
Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHET--QEKIKRILNDAKMAMAS 1987
            LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S         TP     ET   + IK IL  AK  + S
Sbjct:  333 LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGS--------ITPRIRTPETGSDDAIKSILEQAKKEIQS 444

HSP 5 Score: 82.4185 bits (202), Expect = 3.840e-15
Identity = 37/88 (42.05%), Postives = 60/88 (68.18%), Query Frame = 2

Query: 1598 GVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V +L+ +
Sbjct:  836 GIQELVAMSP-ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDV 922

HSP 6 Score: 81.6481 bits (200), Expect = 6.273e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  333 LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 396

HSP 7 Score: 80.8777 bits (198), Expect = 1.245e-14
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct:  846 ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 916

HSP 8 Score: 74.7146 bits (182), Expect = 8.480e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  686 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 752

HSP 9 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            ++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  333 LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 396

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
Match: c3 (complement component 3 [Source:Xenbase;Acc:XB-GENE-486274])

HSP 1 Score: 154.066 bits (388), Expect = 7.317e-37
Identity = 77/188 (40.96%), Postives = 111/188 (59.04%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ ++ L+  +   K  +   +H + S      P L + IDY    +   + H+              KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1024 LDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKLMDMKRMEKKAYMKRRHSSVSDSQPCEP-LSSGIDYSQGASPQPQHHL--------------KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1196

HSP 2 Score: 89.3521 bits (220), Expect = 4.366e-17
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E EDID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  433 DVNGMAPSPSQSESAGSVSEGEDIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 535

HSP 3 Score: 86.2705 bits (212), Expect = 3.524e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  842 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 905

HSP 4 Score: 85.1149 bits (209), Expect = 7.415e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  841 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 905

HSP 5 Score: 82.8037 bits (203), Expect = 4.229e-15
Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            ++DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q+ N+
Sbjct:  455 DIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQNLNR 545

HSP 6 Score: 80.1073 bits (196), Expect = 2.516e-14
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN 
Sbjct: 1023 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV 1093

HSP 7 Score: 78.5666 bits (192), Expect = 8.495e-14
Identity = 33/74 (44.59%), Postives = 53/74 (71.62%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V +L
Sbjct: 1023 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKL 1096

HSP 8 Score: 74.7146 bits (182), Expect = 1.081e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  841 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 904

HSP 9 Score: 73.559 bits (179), Expect = 3.080e-12
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + ++I+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  452 EGEDIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 519

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
Match: c3 (complement component 3 [Source:Xenbase;Acc:XB-GENE-486274])

HSP 1 Score: 153.68 bits (387), Expect = 8.572e-37
Identity = 77/188 (40.96%), Postives = 111/188 (59.04%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ ++ L+  +   K  +   +H + S      P L + IDY    +   + H+              KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct:  996 LDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKLMDMKRMEKKAYMKRRHSSVSDSQPCEP-LSSGIDYSQGASPQPQHHL--------------KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1168

HSP 2 Score: 90.5077 bits (223), Expect = 1.672e-17
Identity = 55/146 (37.67%), Postives = 83/146 (56.85%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHE--TQEKIKRILNDAKMAM 1981
            D N M     + ES G V E EDID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+          PA P    +   + + I+ IL  A+  M
Sbjct:  461 DVNGMAPSPSQSESAGSVSEGEDIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ-------RAEPAQPTSASNSGNSDDAIRSILQQARREM 594

HSP 3 Score: 86.2705 bits (212), Expect = 3.599e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  814 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 877

HSP 4 Score: 85.1149 bits (209), Expect = 7.573e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  813 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 877

HSP 5 Score: 82.0333 bits (201), Expect = 7.940e-15
Identity = 33/65 (50.77%), Postives = 52/65 (80.00%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            ++DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  483 DIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 547

HSP 6 Score: 80.1073 bits (196), Expect = 2.571e-14
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN 
Sbjct:  995 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV 1065

HSP 7 Score: 78.1814 bits (191), Expect = 9.689e-14
Identity = 33/74 (44.59%), Postives = 53/74 (71.62%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V +L
Sbjct:  995 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKL 1068

HSP 8 Score: 74.7146 bits (182), Expect = 1.264e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  813 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 876

HSP 9 Score: 74.7146 bits (182), Expect = 1.297e-12
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKV--SDNGSNKIENTKP 2929
            + ++I+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L    N     S  G  + E  +P
Sbjct:  480 EGEDIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRAEPAQP 570

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
Match: c3 (complement component 3 [Source:Xenbase;Acc:XB-GENE-486274])

HSP 1 Score: 151.754 bits (382), Expect = 3.136e-36
Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYR 3847
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ ++ L+  +   K  +   +H + S      P L + IDY    +   + H+              KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR
Sbjct:  972 LDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKLMDMKRMEKKAYMKRRHSSVSDSQPCEP-LSSGIDYSQGASPQPQHHL--------------KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYR 1142

HSP 2 Score: 88.9669 bits (219), Expect = 5.546e-17
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E EDID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  403 DVNGMAPSPSQSESAGSVSEGEDIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 505

HSP 3 Score: 86.2705 bits (212), Expect = 3.608e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  790 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 853

HSP 4 Score: 85.1149 bits (209), Expect = 8.001e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  789 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 853

HSP 5 Score: 81.6481 bits (200), Expect = 8.288e-15
Identity = 33/65 (50.77%), Postives = 52/65 (80.00%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            ++DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  425 DIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 489

HSP 6 Score: 80.1073 bits (196), Expect = 2.713e-14
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN 
Sbjct:  971 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV 1041

HSP 7 Score: 78.1814 bits (191), Expect = 9.826e-14
Identity = 33/74 (44.59%), Postives = 53/74 (71.62%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V +L
Sbjct:  971 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKL 1044

HSP 8 Score: 74.7146 bits (182), Expect = 1.267e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  789 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 852

HSP 9 Score: 73.1738 bits (178), Expect = 3.499e-12
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + ++I+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  422 EGEDIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 489

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
Match: c3 (complement component 3 [Source:Xenbase;Acc:XB-GENE-486274])

HSP 1 Score: 151.369 bits (381), Expect = 3.480e-36
Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYR 3847
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ ++ L+  +   K  +   +H + S      P L + IDY    +   + H+              KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR
Sbjct:  994 LDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKLMDMKRMEKKAYMKRRHSSVSDSQPCEP-LSSGIDYSQGASPQPQHHL--------------KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYR 1164

HSP 2 Score: 88.9669 bits (219), Expect = 5.599e-17
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E EDID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  403 DVNGMAPSPSQSESAGSVSEGEDIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 505

HSP 3 Score: 86.2705 bits (212), Expect = 3.671e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  812 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 875

HSP 4 Score: 85.1149 bits (209), Expect = 7.869e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  811 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 875

HSP 5 Score: 82.4185 bits (202), Expect = 4.659e-15
Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            ++DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q+ N+
Sbjct:  425 DIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQNLNR 515

HSP 6 Score: 80.1073 bits (196), Expect = 2.828e-14
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN 
Sbjct:  993 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV 1063

HSP 7 Score: 78.1814 bits (191), Expect = 9.986e-14
Identity = 33/74 (44.59%), Postives = 53/74 (71.62%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V +L
Sbjct:  993 ELDTYGITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVDKL 1066

HSP 8 Score: 74.7146 bits (182), Expect = 1.287e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  811 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 874

HSP 9 Score: 73.1738 bits (178), Expect = 3.377e-12
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + ++I+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  422 EGEDIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 489

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
Match: s1pr4 (sphingosine-1-phosphate receptor 4 [Source:Xenbase;Acc:XB-GENE-988208])

HSP 1 Score: 141.354 bits (355), Expect = 5.130e-33
Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSL-QTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT++I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  +  L   +   K  +   ++        IS   ++E       ++N +T   S S   Q  +    KK R+V    +K  L   Y++ PYP  + +E++S +LN+   T+ NWFHNYR R +
Sbjct: 1053 LDTYSITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNIERLRDMKKMEKKAYLKRRY------GLISGGSDSE-------SSNTKTECASPSPQPQEYSHLQMKKPRVVLGLEEKETLKKAYQLEPYPSQQTIEQLSFQLNLKTNTVINWFHNYRSRMR 1230

HSP 2 Score: 86.2705 bits (212), Expect = 3.659e-16
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTS 3526
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   ++ Q +
Sbjct:  903 VDTLDLTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLT--DQLGQGITQQPA 979

HSP 3 Score: 84.3445 bits (207), Expect = 1.552e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  902 EVDTLDLTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 966

HSP 4 Score: 82.8037 bits (203), Expect = 3.832e-15
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMAS 1987
            +D +E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   V  L++I  R+  S      +P T       + + IK IL  AK  + S
Sbjct:  557 IDTSEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVLALRTIQVRQRGSITPRIRTPET------GSDDAIKNILEQAKKEIQS 668

HSP 5 Score: 82.0333 bits (201), Expect = 6.864e-15
Identity = 35/91 (38.46%), Postives = 62/91 (68.13%), Query Frame = 2

Query: 1589 ESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            ++ G+ E   + P ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   ++ L+ +
Sbjct: 1039 QATGIQEMVAMSP-ELDTYSITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNIERLRDM 1128

HSP 6 Score: 80.8777 bits (198), Expect = 1.875e-14
Identity = 32/65 (49.23%), Postives = 52/65 (80.00%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            ++DT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  556 HIDTSEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 620

HSP 7 Score: 80.1073 bits (196), Expect = 3.193e-14
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T ++   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N +
Sbjct: 1052 ELDTYSITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNIE 1123

HSP 8 Score: 75.485 bits (184), Expect = 8.247e-13
Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            I+T+ +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  557 IDTSEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 620

HSP 9 Score: 73.9442 bits (180), Expect = 2.196e-12
Identity = 30/67 (44.78%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  ++  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  902 EVDTLDLTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLTD 968

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Mouse
Match: Cux1 (cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568])

HSP 1 Score: 149.828 bits (377), Expect = 1.160e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1115 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1287

HSP 2 Score: 87.0409 bits (214), Expect = 1.775e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  932 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 995

HSP 3 Score: 86.2705 bits (212), Expect = 2.972e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  931 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 995

HSP 4 Score: 84.7297 bits (208), Expect = 7.465e-16
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  520 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 622

HSP 5 Score: 82.8037 bits (203), Expect = 2.933e-15
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  543 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 632

HSP 6 Score: 80.8777 bits (198), Expect = 1.124e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1114 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1185

HSP 7 Score: 77.7962 bits (190), Expect = 9.764e-14
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1114 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1187

HSP 8 Score: 75.485 bits (184), Expect = 5.025e-13
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  539 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 606

HSP 9 Score: 74.3294 bits (181), Expect = 1.420e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  931 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 994

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Mouse
Match: Cux1 (cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568])

HSP 1 Score: 149.443 bits (376), Expect = 1.258e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct:  995 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1167

HSP 2 Score: 87.0409 bits (214), Expect = 1.785e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  812 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 875

HSP 3 Score: 85.8853 bits (211), Expect = 3.253e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  811 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 875

HSP 4 Score: 85.5001 bits (210), Expect = 5.356e-16
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  400 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 502

HSP 5 Score: 82.8037 bits (203), Expect = 2.856e-15
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  423 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 512

HSP 6 Score: 80.8777 bits (198), Expect = 1.286e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct:  994 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1065

HSP 7 Score: 78.1814 bits (191), Expect = 8.538e-14
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct:  994 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1067

HSP 8 Score: 75.485 bits (184), Expect = 5.572e-13
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  419 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 486

HSP 9 Score: 74.3294 bits (181), Expect = 1.342e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  811 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 874

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Mouse
Match: Cux1 (cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568])

HSP 1 Score: 149.443 bits (376), Expect = 1.311e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1032 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1204

HSP 2 Score: 87.0409 bits (214), Expect = 1.727e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  849 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 912

HSP 3 Score: 86.2705 bits (212), Expect = 2.796e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  848 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 912

HSP 4 Score: 85.1149 bits (209), Expect = 6.734e-16
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  437 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 539

HSP 5 Score: 82.8037 bits (203), Expect = 2.809e-15
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  460 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 549

HSP 6 Score: 81.2629 bits (199), Expect = 1.041e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1031 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1102

HSP 7 Score: 77.7962 bits (190), Expect = 9.445e-14
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1031 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1104

HSP 8 Score: 75.8702 bits (185), Expect = 4.702e-13
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  456 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 523

HSP 9 Score: 74.3294 bits (181), Expect = 1.340e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  848 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 911

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Mouse
Match: Cux1 (cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568])

HSP 1 Score: 149.443 bits (376), Expect = 1.334e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1123 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1295

HSP 2 Score: 87.0409 bits (214), Expect = 1.793e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  940 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1003

HSP 3 Score: 86.2705 bits (212), Expect = 3.240e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  939 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1003

HSP 4 Score: 85.5001 bits (210), Expect = 5.517e-16
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  528 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 630

HSP 5 Score: 82.8037 bits (203), Expect = 2.938e-15
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  551 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 640

HSP 6 Score: 80.8777 bits (198), Expect = 1.256e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1122 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1193

HSP 7 Score: 78.1814 bits (191), Expect = 8.615e-14
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1122 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1195

HSP 8 Score: 75.485 bits (184), Expect = 5.615e-13
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  547 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 614

HSP 9 Score: 74.3294 bits (181), Expect = 1.285e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  939 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 1002

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Mouse
Match: Cux1 (cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568])

HSP 1 Score: 149.443 bits (376), Expect = 1.530e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1110 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1282

HSP 2 Score: 86.6557 bits (213), Expect = 1.914e-16
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  927 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 990

HSP 3 Score: 85.8853 bits (211), Expect = 3.370e-16
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  926 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 990

HSP 4 Score: 85.1149 bits (209), Expect = 5.691e-16
Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAK 1972
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+   G+      A+    D    E IK IL  AK
Sbjct:  537 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ--RGNITTRIRASETGSD----EAIKSILEQAK 666

HSP 5 Score: 81.6481 bits (200), Expect = 7.054e-15
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  560 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 623

HSP 6 Score: 80.8777 bits (198), Expect = 1.307e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1109 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1180

HSP 7 Score: 78.1814 bits (191), Expect = 9.117e-14
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1109 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1182

HSP 8 Score: 75.485 bits (184), Expect = 5.650e-13
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  556 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 623

HSP 9 Score: 74.3294 bits (181), Expect = 1.371e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  926 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 989

[Close]

BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
Match: sp|P39881|CUX1_CANLF (Homeobox protein cut-like 1 (Fragment) OS=Canis lupus familiaris OX=9615 GN=CUX1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.305e-35
Identity = 78/188 (41.49%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct:  566 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 738

HSP 2 Score: 86.6557 bits (213), Expect = 1.396e-15
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  383 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 446

HSP 3 Score: 85.5001 bits (210), Expect = 2.922e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  382 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 446

HSP 4 Score: 80.8777 bits (198), Expect = 7.236e-14
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 2

Query: 2669 NDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            + E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  PNN 
Sbjct:  563 SPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPNNV 635

HSP 5 Score: 78.1814 bits (191), Expect = 5.228e-13
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V++L
Sbjct:  565 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 638

HSP 6 Score: 77.411 bits (189), Expect = 8.922e-13
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 2

Query: 3308 SNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            S  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:    1 SRQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 84

HSP 7 Score: 73.9442 bits (180), Expect = 9.927e-12
Identity = 32/72 (44.44%), Postives = 53/72 (73.61%), Query Frame = 2

Query: 1658 RIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:    3 QVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 74

HSP 8 Score: 73.1738 bits (178), Expect = 1.813e-11
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  382 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 445

HSP 9 Score: 67.781 bits (164), Expect = 8.515e-10
Identity = 30/55 (54.55%), Postives = 44/55 (80.00%), Query Frame = 2

Query: 2705 IKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:    4 VKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 58

[Close]

BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
Match: sp|P53565|CUX1_RAT (Homeobox protein cut-like 1 OS=Rattus norvegicus OX=10116 GN=Cux1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 8.585e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1110 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1282

HSP 2 Score: 87.0409 bits (214), Expect = 1.179e-15
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  927 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 990

HSP 3 Score: 86.2705 bits (212), Expect = 2.130e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  926 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 990

HSP 4 Score: 85.5001 bits (210), Expect = 3.390e-15
Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAK 1972
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+   G+      A+    D    E IK IL  AK
Sbjct:  537 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ--RGNITTRIRASETGSD----EAIKSILEQAK 666

HSP 5 Score: 82.0333 bits (201), Expect = 4.274e-14
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  560 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 623

HSP 6 Score: 80.8777 bits (198), Expect = 8.260e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1109 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1180

HSP 7 Score: 78.1814 bits (191), Expect = 5.525e-13
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1109 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1182

HSP 8 Score: 75.485 bits (184), Expect = 3.663e-12
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  556 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 623

HSP 9 Score: 74.3294 bits (181), Expect = 8.890e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  926 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 989

[Close]

BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
Match: sp|P53564|CUX1_MOUSE (Homeobox protein cut-like 1 OS=Mus musculus OX=10090 GN=Cux1 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 8.783e-35
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P     IDY            +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct: 1121 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVG-IDY------------SQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1293

HSP 2 Score: 87.0409 bits (214), Expect = 1.182e-15
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  938 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1001

HSP 3 Score: 86.2705 bits (212), Expect = 2.172e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  937 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1001

HSP 4 Score: 85.5001 bits (210), Expect = 3.923e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G + E E+ID AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  526 DVNGMAPSPSQSESAGSISEGEEIDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 628

HSP 5 Score: 83.1889 bits (204), Expect = 1.953e-14
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  549 IDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 638

HSP 6 Score: 80.8777 bits (198), Expect = 8.635e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1120 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1191

HSP 7 Score: 78.1814 bits (191), Expect = 5.973e-13
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1120 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1193

HSP 8 Score: 75.485 bits (184), Expect = 3.764e-12
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +EI+T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  545 EGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 612

HSP 9 Score: 74.3294 bits (181), Expect = 8.982e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  937 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 1000

[Close]

BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
Match: sp|P39880|CUX1_HUMAN (Homeobox protein cut-like 1 OS=Homo sapiens OX=9606 GN=CUX1 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 3.484e-34
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+ I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ +  L+  +   K  +   +H + S      P              +  T  +  +S Q  ++   KK R+V    +K  L   Y+  PYP  + +E+++ +LN+   T+ NWFHNYR R
Sbjct: 1126 LDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPP-------------SVGTEYSQGASPQPQHQL--KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSR 1298

HSP 2 Score: 86.6557 bits (213), Expect = 1.350e-15
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  943 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1006

HSP 3 Score: 86.2705 bits (212), Expect = 2.131e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  942 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 1006

HSP 4 Score: 84.7297 bits (208), Expect = 6.336e-15
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2

Query: 1562 DTNNMI---DEVESNG-VHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            D N M     + ES G V E E++D AE     +A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  528 DVNGMAPSPSQSESAGSVSEGEEMDTAE-----IARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQ 630

HSP 5 Score: 83.1889 bits (204), Expect = 1.731e-14
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L   D+ N L       + + N  Q  N+
Sbjct:  551 MDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLS--DEQNILALRSIQGRQRENPGQSLNR 640

HSP 6 Score: 80.8777 bits (198), Expect = 8.332e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T  +   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PNN +
Sbjct: 1125 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVE 1196

HSP 7 Score: 78.5666 bits (192), Expect = 5.035e-13
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1493 PLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            P+  S  + P +P+    +D    T   +    +  + E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct: 1080 PIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSP-ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKL 1198

HSP 8 Score: 74.3294 bits (181), Expect = 8.171e-12
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  547 EGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 614

HSP 9 Score: 74.3294 bits (181), Expect = 9.593e-12
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  942 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 1005

[Close]

BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
Match: sp|P70298|CUX2_MOUSE (Homeobox protein cut-like 2 OS=Mus musculus OX=10090 GN=Cux2 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 8.909e-33
Identity = 82/217 (37.79%), Postives = 119/217 (54.84%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTL-----LSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDNTGN 3925
            LDT++I+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  +  L     L  +   K ++      + S+    SP   +E     L               Q  +    KK R+V   ++K  L   Y++ PYP  + +E +S +LN+   T+ NWFHNYR R +  R + V  T +  ++ D +G 
Sbjct:  992 LDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNVEKLRDMKKLEKKAYLKRRYGLIGTGSDSE----SPAAHSECPSPCL-------------QPQELSLMQAKKPRVVLAPAEKEALRKAYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMR--REMLVEGTQDDPDF-DPSGG 1188

HSP 2 Score: 86.2705 bits (212), Expect = 1.939e-15
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  837 VDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 900

HSP 3 Score: 85.1149 bits (209), Expect = 4.671e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  836 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL 900

HSP 4 Score: 83.5741 bits (205), Expect = 1.425e-14
Identity = 37/90 (41.11%), Postives = 62/90 (68.89%), Query Frame = 2

Query: 1592 SNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            + G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V++L+ +
Sbjct:  979 AGGIQEMVAMSP-ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNVEKLRDM 1067

HSP 5 Score: 83.1889 bits (204), Expect = 1.948e-14
Identity = 54/157 (34.39%), Postives = 83/157 (52.87%), Query Frame = 2

Query: 1523 KDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHET--QEKIKRILNDAKMAMAS 1987
            K P+    +    +     + V+  G  E++      LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   V  L++I  R+  S         TP     ET   + IK IL  AK  + S
Sbjct:  460 KPPSAPAASVPCPEPTGAPEAVDGAGPEEEQ------LDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVLALRTIQVRQRGS--------ITPRIRTPETGSDDAIKSILEQAKKEIES 602

HSP 6 Score: 81.2629 bits (199), Expect = 6.097e-14
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
             LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  490 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 554

HSP 7 Score: 79.7221 bits (195), Expect = 1.876e-13
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T ++   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N +
Sbjct:  991 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNVE 1062

HSP 8 Score: 75.485 bits (184), Expect = 3.374e-12
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + ++++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  487 EEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 554

HSP 9 Score: 74.7146 bits (182), Expect = 5.744e-12
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  836 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSD 902

[Close]

BLAST of Homeobox protein cut-like vs. TrEMBL
Match: A0A3R7P616 (Homeobox protein cut-like OS=Penaeus vannamei OX=6689 GN=C7M84_004897 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.900e-46
Identity = 135/410 (32.93%), Postives = 198/410 (48.29%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPN--------NFKVSDNGSNKIEN-TKPDFQIFXXXXXXXXXXXXXXGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNT--LLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            Q   +NT  +V  +KE L++ SISQR FG  +LGLSQGS+SD+L+RPK W +LT KGREP+IRM  +L   N         +K++     +    T P   +      P   ++P    G      S    S ++  K  I++  + T  ++ +      R     G    S  +  + +              L      FD     L  L +   +LDT      ++E L+ NN+GQKLFGE +L LSQGSVSELLSKPK W+ LS KG+EP++RMQLWL  P  L    LL N+          + E   ++ A+ P  E   D + +                 +   + KK R++F+E QK  L   + + PYP    +E ++++L +  +TI NWFHN+RMR K
Sbjct:  664 QYSNMNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYTAPPLYLVGGCPLPGGLAAPGCLPGGLSTSGSPTLPSYTSKHKTCIINRDQQTTPHEAS-----CRHPEEHGVASSSRGDPPLGLP-------------LPSHPMSFDARMPILDPLRKCRRDLDT----RKIKEALLANNIGQKLFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPRNLEKLQLLKNE----------RREASKRRRALDPTAEVSQDSQDIFQA-------------PSPGGSSKKQRVLFSEEQKEALRLAFALDPYPNLATIEFLAQELQLSTRTITNWFHNHRMRLK 1028

HSP 2 Score: 122.094 bits (305), Expect = 6.755e-24
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKG--------------FSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMAST 1990
            LD   +A R+R++LS+H+IGQRLFAK++L LSQGTVSELLSKPK W KL+EKGRDSYRKM+ WA D   V  LKS+ P+K                +G +   S A    +D  T+E+I+ IL +A  AM S+
Sbjct:  310 LDTLCLARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKSWDKLTEKGRDSYRKMHAWATDDNAVYLLKSLIPKKACRRKPETGLTLNGLLTGTHKDSSGAFRGPDDSVTEERIQHILTEASRAMTSS 442

HSP 3 Score: 81.2629 bits (199), Expect = 2.101e-11
Identity = 34/64 (53.12%), Postives = 50/64 (78.12%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLW 3478
            +LDT  ++  VRE+L  +N+GQ+LF + IL LSQG+VSELLSKPK+W++L+ KG++ Y +M  W
Sbjct:  309 SLDTLCLARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKSWDKLTEKGRDSYRKMHAW 372

HSP 4 Score: 74.3294 bits (181), Expect = 2.242e-9
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2

Query: 1646 EVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKS----IAPRK 1873
            E+  ++++ LS +SI QRLF + VL LSQG+VS+LL++PKPW  L++KGR+ + +M  + +D   V +L +    IAP K
Sbjct:  672 EIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEK 751

HSP 5 Score: 72.4034 bits (176), Expect = 9.765e-9
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 1658 RIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELK 1855
            +I++ L  ++IGQ+LF + VL LSQG+VSELLSKPKPW  LS KGR+ + +M  W  D   +++L+
Sbjct:  868 KIKEALLANNIGQKLFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPRNLEKLQ 933

[Close]

BLAST of Homeobox protein cut-like vs. TrEMBL
Match: A0A401PN68 (Homeobox protein cut-like OS=Scyliorhinus torazame OX=75743 GN=scyTo_0003657 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.137e-46
Identity = 136/402 (33.83%), Postives = 190/402 (47.26%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKPDFQIFXXXXXXXXXXXXXXGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNH--------KKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            E++T  L   +KE L +N I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L             NK+  T    Q    ++   +  SP       + E+S         Q+  + +  E+T + Q  ES + S S                     L G  ++N             S   +  +      LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  +  L   +   K  +   ++                     LIN   ++   S  S  T+    H        KK R+V    +K  L   Y++ PYP  + +E ++ +LN    T+ NWFHNYR R
Sbjct:  592 EVDTIELTRQVKEKLAQNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLI------------NKLGQTAQPAQPIQANNTVQARYSPSPPPSPTDCEKS---------QQEPVSATLESTKENQQPESQSASHS---------------------LSGKSLSN-----------GQSPTGIQEMVAMSSELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPFNVEKLRDMKKIEKKAYLKRRYG--------------------LINGGSDSDSPSTQSESTSPGIQHQLFHHYQVKKPRVVLDPEEKEALKKAYQLEPYPSQQTIEALASQLNRKTNTVINWFHNYRSR 920

HSP 2 Score: 83.9593 bits (206), Expect = 3.053e-12
Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 2

Query: 2528 EMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            +  P+S  LES   +      S  H    K L +  +P    +    + E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P N +
Sbjct:  695 QQEPVSATLESTKENQQPESQSASHSLSGKSLSNGQSPTGIQEMVAMSSELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPFNVE 815

HSP 3 Score: 83.1889 bits (204), Expect = 4.988e-12
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 2

Query: 1622 DPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAK 1972
            D   L+  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S      +P T       + E IK IL  AK
Sbjct:  249 DEEHLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPET------GSDEAIKNILEQAK 359

HSP 4 Score: 80.8777 bits (198), Expect = 2.643e-11
Identity = 33/78 (42.31%), Postives = 57/78 (73.08%), Query Frame = 2

Query: 1628 AELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            +ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V++L+ +
Sbjct:  743 SELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPFNVEKLRDM 820

HSP 5 Score: 80.4925 bits (197), Expect = 3.184e-11
Identity = 32/65 (49.23%), Postives = 53/65 (81.54%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +L+T  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W++L+ KGKEP+++M+ +L
Sbjct:  252 HLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFL 316

HSP 6 Score: 74.7146 bits (182), Expect = 1.803e-9
Identity = 30/64 (46.88%), Postives = 49/64 (76.56%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQW 1822
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W
Sbjct:  592 EVDTIELTRQVKEKLAQNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLW 655

HSP 7 Score: 73.559 bits (179), Expect = 4.533e-9
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + + T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  251 EHLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFL 316

[Close]

BLAST of Homeobox protein cut-like vs. TrEMBL
Match: A0A401S0Y8 (Homeobox protein cut-like OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0002446 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.520e-42
Identity = 132/407 (32.43%), Postives = 192/407 (47.17%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKPDFQIFXXXXXXXXXXXXXXGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQP---DKLNTL--LSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNH--------KKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L             +K+  +    Q    ++   +  SP       + E+S         Q+  + +  E+T + Q  ES + S S S  G+   +             G   T   ++   S + D      + +T+++            +EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P   +KL  +  +  +   K ++                          LIN   ++   S  S   +    H        KK R+V    +K  L   Y++ PYP  + +E ++ +LN    T+ NWFHNYR R
Sbjct:  908 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLI------------DKLGQSTHPPQPIQANNAVQARYSPSPPPSPTDCEKS---------QQEPVCAALESTKENQQPESQSASHSLS--GKSLSN-------------GQSPTGIQEMVAMSSELDT-----YAITKKV------------KEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPFNVEKLRDMKKIEKKAYLKRRYG-------------------------LINGGSDSDSPSTQSESASPGIQHQVFHHYQVKKPRVVLAPEEKEALKKAYQLEPYPSQQTIEALASQLNRKTNTVINWFHNYRSR 1236

HSP 2 Score: 82.8037 bits (203), Expect = 6.047e-12
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 2

Query: 1622 DPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAK 1972
            D   L+  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S      +P T       + E IK IL  AK
Sbjct:  564 DEEHLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPET------GSDEAIKNILEQAK 674

HSP 3 Score: 82.4185 bits (202), Expect = 7.857e-12
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 2

Query: 2528 EMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            +  P+   LES   +      S  H    K L +  +P    +    + E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P N +
Sbjct: 1011 QQEPVCAALESTKENQQPESQSASHSLSGKSLSNGQSPTGIQEMVAMSSELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPFNVE 1131

HSP 4 Score: 80.8777 bits (198), Expect = 2.766e-11
Identity = 33/78 (42.31%), Postives = 57/78 (73.08%), Query Frame = 2

Query: 1628 AELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            +ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V++L+ +
Sbjct: 1059 SELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPFNVEKLRDM 1136

HSP 5 Score: 80.4925 bits (197), Expect = 3.139e-11
Identity = 32/65 (49.23%), Postives = 53/65 (81.54%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +L+T  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W++L+ KGKEP+++M+ +L
Sbjct:  567 HLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFL 631

HSP 6 Score: 75.0998 bits (183), Expect = 1.489e-9
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  908 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLID 974

HSP 7 Score: 73.9442 bits (180), Expect = 3.674e-9
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            + + T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  566 EHLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFL 631

[Close]

BLAST of Homeobox protein cut-like vs. TrEMBL
Match: L5LJG3 (Homeobox protein cut-like OS=Myotis davidii OX=225400 GN=MDA_GLEAN10020234 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.933e-42
Identity = 138/436 (31.65%), Postives = 200/436 (45.87%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG---------CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKPDFQIFXXXXXXXXXXXXXXGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESF---TGSRSCSTEGREYDSYDEDIINVNGELC-GAEIT-NFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTL-----LSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDNTGN 3925
            E++T  L   +KE L KN I QR FG          +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L        SD     I                            ++   S+   +E+        S TE     Q+  S    +   +   EGR   S       ++G++C G++ T    ++   S + D      +++T+R+            +EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  +  L     L  +   K ++      + S+    SP   +E     L               Q  +    KK R+V    +K  L   Y++ PYP  + +E +S +LN+   T+ NWFHNYR R +  R + V  T +  +   + G 
Sbjct:  761 EVDTLELTRQVKEKLAKNGICQRIFGEKVKTGAGEQVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWL--------SDQLGQAI---------------------------GQQPSASQASPTETRSSPSPPPSPTEPEKSSQEPLSLVLESSKENQQPEGRSSSS-------LSGKMCSGSQATGGIQEIVAMSPELDT-----YSITKRV------------KEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVEKLRDMKKLEKKAYLKRRYGLISTGSDSE----SPTTHSECPSPCL-------------QPQDPSLLQIKKPRVVLAPEEKEALRKAYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMR--REMLVEGTQDEPDLDPSAGT 1118

HSP 2 Score: 82.8037 bits (203), Expect = 6.184e-12
Identity = 37/90 (41.11%), Postives = 62/90 (68.89%), Query Frame = 2

Query: 1592 SNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            + G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V++L+ +
Sbjct:  908 TGGIQEIVAMSP-ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVEKLRDM 996

HSP 3 Score: 81.2629 bits (199), Expect = 1.969e-11
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
             LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  410 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 474

HSP 4 Score: 80.4925 bits (197), Expect = 3.215e-11
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKG 1876
            +LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   V   K+  P  G
Sbjct:  410 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVPMTKASLPLPG 491

HSP 5 Score: 74.3294 bits (181), Expect = 2.374e-9
Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  410 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 474

HSP 6 Score: 68.1662 bits (165), Expect = 1.954e-7
Identity = 31/75 (41.33%), Postives = 50/75 (66.67%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAK--------HVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F +         VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  761 EVDTLELTRQVKEKLAKNGICQRIFGEKVKTGAGEQVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSD 835

[Close]

BLAST of Homeobox protein cut-like vs. TrEMBL
Match: A0A0P7WZK1 (One cut domain family member OS=Scleropages formosus OX=113540 GN=Z043_111580 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.171e-35
Identity = 76/188 (40.43%), Postives = 107/188 (56.91%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P  +  L+  +   K  +   +H + S+     P L                   S+S      +   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct:  101 LDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQPAEPGLPG--------------GEGSQSGSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSR 274

HSP 2 Score: 80.8777 bits (198), Expect = 8.063e-12
Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 2

Query: 2669 NDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            + E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  P N +
Sbjct:   98 SPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVE 171

HSP 3 Score: 77.7962 bits (190), Expect = 7.863e-11
Identity = 32/74 (43.24%), Postives = 54/74 (72.97%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V++L
Sbjct:  100 ELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKL 173

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
Match: cux1a (cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868])

HSP 1 Score: 150.984 bits (380), Expect = 2.983e-36
Identity = 79/191 (41.36%), Postives = 115/191 (60.21%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEI---DYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL  P+ ++ L+  +   K  +   +H + S+    SP  E  +   DY         +  +S   L   ++   KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct:  978 LDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNSVDKLMEMKRMEKKAYMKRRHSSVSE----SPSREAVVCVADY---------SQASSPQPLVRDHQPQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSR 1155

HSP 2 Score: 85.5001 bits (210), Expect = 4.066e-16
Identity = 37/81 (45.68%), Postives = 59/81 (72.84%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            E+D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPWSKL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  461 EMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMRQFLSDEQNILALRSIQGRQ 541

HSP 3 Score: 82.8037 bits (203), Expect = 2.323e-15
Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            E++T  L   +K+ L K+ I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L
Sbjct:  829 EVDTVELTQQVKDKLAKSGICQRVFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 893

HSP 4 Score: 81.2629 bits (199), Expect = 7.097e-15
Identity = 32/64 (50.00%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  ++  V++ L  + + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL
Sbjct:  830 VDTVELTQQVKDKLAKSGICQRVFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWL 893

HSP 5 Score: 80.1073 bits (196), Expect = 1.654e-14
Identity = 38/92 (41.30%), Postives = 62/92 (67.39%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQ 3565
            +DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK W++L+ +GKEP+ +M+ +L   D+ N L       + + N  Q+ N+
Sbjct:  462 MDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMRQFLS--DEQNILALRSIQGRQRENPGQNLNR 551

HSP 6 Score: 79.337 bits (194), Expect = 2.770e-14
Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNN 2881
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  PN+
Sbjct:  977 ELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNS 1046

HSP 7 Score: 78.5666 bits (192), Expect = 5.404e-14
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL--------KSIAPRKGFS-------------GHYAGMSPATPIKEDHETQEKIKRIL 1960
            ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W  D   V +L        K+   R+  S               Y+  S   P+  DH+ Q K  R++
Sbjct:  977 ELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNSVDKLMEMKRMEKKAYMKRRHSSVSESPSREAVVCVADYSQASSPQPLVRDHQPQLKKPRVV 1107

HSP 8 Score: 75.485 bits (184), Expect = 4.010e-13
Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 2

Query: 2651 ADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            A  + + +E++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK WS LT +G+EP+ +M ++L
Sbjct:  453 AGSASEAEEMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMRQFL 525

HSP 9 Score: 74.3294 bits (181), Expect = 9.500e-13
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQ 1939
            E+D  E+  +++D L+   I QR+F + VL LSQG+VS++LS+PK WSKL++KGR+ + +M  W       Q    I P+   S   A  SP +  +E  ++Q
Sbjct:  829 EVDTVELTQQVKDKLAKSGICQRVFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWLNGENTHQPHPEITPKTSASCSPAPESPISSAEESVKSQ 931

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
Match: cux2b (cut like homeobox 2 [Source:NCBI gene;Acc:103043710])

HSP 1 Score: 136.346 bits (342), Expect = 1.012e-31
Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQP---DKLNTL--LSNQTSYKYKHNC-----NQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P   DKL  +  +  +   K ++       +     ++   ISP L                     + ++       KK R+V    +K  L   Y   PYP    +E ++ +LN+   T+ NWFHNYR R +
Sbjct: 1022 LDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSPGSDSDSPGARSDCISPGL---------------------APMELCPFSQAKKPRVVLAAEEKEALRRAYLQEPYPSQHTIEMLATQLNLKTNTVINWFHNYRSRMR 1200

HSP 2 Score: 86.6557 bits (213), Expect = 1.870e-16
Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKY 3535
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   L+ Q  + +
Sbjct:  863 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL--DQLGQGLNQQPIHSH 942

HSP 3 Score: 85.5001 bits (210), Expect = 3.770e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  862 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 927

HSP 4 Score: 81.6481 bits (200), Expect = 5.175e-15
Identity = 39/108 (36.11%), Postives = 68/108 (62.96%), Query Frame = 2

Query: 1598 GVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDS---TRVQELKSIAPRKGFSGHYAGMSPAT 1912
            G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D     +++++K +  +      Y  +SP +
Sbjct: 1011 GIQELVAMSP-ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSPGS 1117

HSP 5 Score: 80.8777 bits (198), Expect = 1.107e-14
Identity = 32/64 (50.00%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  501 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 564

HSP 6 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct: 1021 ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1091

HSP 7 Score: 80.4925 bits (197), Expect = 1.391e-14
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHET--QEKIKRILNDAKMAMAS 1987
            +D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S         TP     ET   + IK IL  AK  + S
Sbjct:  501 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGS--------ITPRIRTPETGSDDAIKNILEQAKKEIQS 612

HSP 8 Score: 75.0998 bits (183), Expect = 6.330e-13
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            ++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  501 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 564

HSP 9 Score: 74.3294 bits (181), Expect = 9.179e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  862 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 928

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
Match: cux2b (cut like homeobox 2 [Source:NCBI gene;Acc:103043710])

HSP 1 Score: 136.346 bits (342), Expect = 1.024e-31
Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQP---DKLNTL--LSNQTSYKYKHNC-----NQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P   DKL  +  +  +   K ++       +     ++   ISP L                     + ++       KK R+V    +K  L   Y   PYP    +E ++ +LN+   T+ NWFHNYR R +
Sbjct: 1084 LDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSPGSDSDSPGARSDCISPGL---------------------APMELCPFSQAKKPRVVLAAEEKEALRRAYLQEPYPSQHTIEMLATQLNLKTNTVINWFHNYRSRMR 1262

HSP 2 Score: 86.6557 bits (213), Expect = 1.772e-16
Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKY 3535
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   L+ Q  + +
Sbjct:  925 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL--DQLGQGLNQQPIHSH 1004

HSP 3 Score: 85.5001 bits (210), Expect = 3.602e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  924 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 989

HSP 4 Score: 82.0333 bits (201), Expect = 4.657e-15
Identity = 39/108 (36.11%), Postives = 68/108 (62.96%), Query Frame = 2

Query: 1598 GVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDS---TRVQELKSIAPRKGFSGHYAGMSPAT 1912
            G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D     +++++K +  +      Y  +SP +
Sbjct: 1073 GIQELVAMSP-ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSPGS 1179

HSP 5 Score: 80.8777 bits (198), Expect = 1.056e-14
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct: 1083 ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1153

HSP 6 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 32/64 (50.00%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  563 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 626

HSP 7 Score: 80.4925 bits (197), Expect = 1.316e-14
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHET--QEKIKRILNDAKMAMAS 1987
            +D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S         TP     ET   + IK IL  AK  + S
Sbjct:  563 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGS--------ITPRIRTPETGSDDAIKNILEQAKKEIQS 674

HSP 8 Score: 75.0998 bits (183), Expect = 5.687e-13
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            ++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  563 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 626

HSP 9 Score: 74.3294 bits (181), Expect = 8.972e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  924 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 990

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
Match: cux2b (cut like homeobox 2 [Source:NCBI gene;Acc:103043710])

HSP 1 Score: 136.346 bits (342), Expect = 1.147e-31
Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQP---DKLNTL--LSNQTSYKYKHNC-----NQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P   DKL  +  +  +   K ++       +     ++   ISP L                     + ++       KK R+V    +K  L   Y   PYP    +E ++ +LN+   T+ NWFHNYR R +
Sbjct: 1073 LDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSPGSDSDSPGARSDCISPGL---------------------APMELCPFSQAKKPRVVLAAEEKEALRRAYLQEPYPSQHTIEMLATQLNLKTNTVINWFHNYRSRMR 1251

HSP 2 Score: 86.6557 bits (213), Expect = 1.844e-16
Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKY 3535
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   L+ Q  + +
Sbjct:  914 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL--DQLGQGLNQQPIHSH 993

HSP 3 Score: 85.5001 bits (210), Expect = 3.780e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  913 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 978

HSP 4 Score: 82.0333 bits (201), Expect = 4.971e-15
Identity = 39/108 (36.11%), Postives = 68/108 (62.96%), Query Frame = 2

Query: 1598 GVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDS---TRVQELKSIAPRKGFSGHYAGMSPAT 1912
            G+ E   + P ELD   +  R++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D     +++++K +  +      Y  +SP +
Sbjct: 1062 GIQELVAMSP-ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSPGS 1168

HSP 5 Score: 80.8777 bits (198), Expect = 1.090e-14
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct: 1072 ELDTYAITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1142

HSP 6 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 32/64 (50.00%), Postives = 51/64 (79.69%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            +DT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  552 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 615

HSP 7 Score: 80.4925 bits (197), Expect = 1.429e-14
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHET--QEKIKRILNDAKMAMAS 1987
            +D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+  S         TP     ET   + IK IL  AK  + S
Sbjct:  552 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGS--------ITPRIRTPETGSDDAIKNILEQAKKEIQS 663

HSP 8 Score: 75.0998 bits (183), Expect = 6.176e-13
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 2

Query: 2678 INTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            ++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  552 VDTAEIAYQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 615

HSP 9 Score: 74.3294 bits (181), Expect = 9.500e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  913 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 979

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
Match: ENSAMXT00000036001.1 (homeobox protein cut-like 1 [Source:NCBI gene;Acc:107197551])

HSP 1 Score: 125.561 bits (314), Expect = 1.497e-28
Identity = 73/239 (30.54%), Postives = 126/239 (52.72%), Query Frame = 2

Query: 3146 DSYDEDII---NVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            +SY E++     ++G  C   + +  Q D +     D+K+++       + LDT +I+  V+EVL+ +NLGQ+L GE +L LSQGSVS+LL++PK W  LS KG+EP++RM LWL+ P  + +L + +T         Q     +  ++     +    E L++      + +    Q T     K+ R+V T  +K  L   +++ PYP     + ++ +L +   T+ NWF+N+R R
Sbjct:  534 ESYKENLQPPQALDGRHC---VKDLSQPDADLHNGLDAKQQMLQR----LELDTLSITRKVKEVLVEHNLGQRLLGEQVLGLSQGSVSDLLARPKPWKDLSVKGREPFIRMYLWLKDPQNIESLKTMKT-------LGQRAQTKRPFSLLSAWSDSTSQEPLLD------VTAHPPEQFTMA---KRPRVVLTSREKEVLSKAFQLEPYPSHHTTQRLALQLGLQASTVTNWFYNHRSR 749

HSP 2 Score: 80.4925 bits (197), Expect = 9.360e-15
Identity = 33/77 (42.86%), Postives = 54/77 (70.13%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            ELD   +  +++++L  H++GQRL  + VL LSQG+VS+LL++PKPW  LS KGR+ + +M  W +D   ++ LK++
Sbjct:  577 ELDTLSITRKVKEVLVEHNLGQRLLGEQVLGLSQGSVSDLLARPKPWKDLSVKGREPFIRMYLWLKDPQNIESLKTM 653

HSP 3 Score: 77.411 bits (189), Expect = 9.866e-14
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = 2

Query: 2663 LQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            LQ  E++T ++   +KE L ++++ QR  G  +LGLSQGS+SD+L+RPK W  L+ KGREP+IRM  +L  P N +
Sbjct:  573 LQRLELDTLSITRKVKEVLVEHNLGQRLLGEQVLGLSQGSVSDLLARPKPWKDLSVKGREPFIRMYLWLKDPQNIE 648

HSP 4 Score: 71.633 bits (174), Expect = 5.399e-12
Identity = 40/114 (35.09%), Postives = 66/114 (57.89%), Query Frame = 2

Query: 1643 TEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPR----KGFSGHYAGMSPATPIKEDHETQEKIKRILNDAK 1972
             E+A +++++L  H IGQR+F + VL+  QG+VSE+L+ PKPWSKL+ +G++ + +M  +  D   V  L+ I  R    +  S    G S +     D  + + I+ IL +AK
Sbjct:  236 AEIAQQVKELLQKHKIGQRVFGQFVLDRLQGSVSEILAHPKPWSKLTTRGKEPFLRMIHFLSDEQNVLVLQIIQDRLRGEQDSSLKTFGNSSSVIHSSDKHSDDAIRNILENAK 349

HSP 5 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 27/61 (44.26%), Postives = 46/61 (75.41%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRM 3469
             + T  I+  V+E+L  + +GQ++FG+ +L+  QGSVSE+L+ PK W++L+ +GKEP++RM
Sbjct:  232 QITTAEIAQQVKELLQKHKIGQRVFGQFVLDRLQGSVSEILAHPKPWSKLTTRGKEPFLRM 292

HSP 6 Score: 68.1662 bits (165), Expect = 6.127e-11
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKV 2890
            +I T  +   +KE L K+ I QR FG  +L   QGS+S+IL+ PK WS LT +G+EP++RM+ +L    N  V
Sbjct:  232 QITTAEIAQQVKELLQKHKIGQRVFGQFVLDRLQGSVSEILAHPKPWSKLTTRGKEPFLRMIHFLSDEQNVLV 304

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Sea Lamprey
Match: onecut3a (one cut homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-050208-744])

HSP 1 Score: 70.4774 bits (171), Expect = 2.426e-13
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E++  EVA RI   L  +SI Q +FA+ VL  SQGT+S+LL  PKPWSKL + GR+++R+M +W Q+
Sbjct:  171 EINTREVAQRISTELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRRMWKWLQE 236

HSP 2 Score: 53.5286 bits (127), Expect = 8.718e-8
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 2

Query: 2666 QNDEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            Q +EINT  +   I   L + SI Q  F   +L  SQG++SD+L  PK WS L + GRE + RM K+L +P   ++S
Sbjct:  168 QAEEINTREVAQRISTELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKLKS-GRETFRRMWKWLQEPEFQRMS 243

HSP 3 Score: 48.1358 bits (113), Expect = 6.106e-6
Identity = 22/68 (32.35%), Postives = 42/68 (61.76%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPD 3493
            ++T  ++  +   L   ++ Q +F + +L  SQG++S+LL  PK W++L   G+E + RM  WL++P+
Sbjct:  172 INTREVAQRISTELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQEPE 238

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Nematostella
Match: EDO45004 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RU16])

HSP 1 Score: 70.4774 bits (171), Expect = 8.378e-14
Identity = 51/189 (26.98%), Postives = 91/189 (48.15%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRN 3856
            +DT A++  + E L   ++ Q +F + +LN SQG++S+LL KPK WN++   GK  + RM+ WL  P+            K        ++++K+S                  N E+ + +  S         KK R  FTE+QK  L +I++    P  +  + ++++L + L ++ N+F N R R+
Sbjct:   25 IDTKAMALKLTEELRRYHIPQAVFAKKVLNRSQGTLSDLLRKPKPWNEMRL-GKAIFKRMKEWLELPE-----------VKRIPQLRMEDSRAKRS------------------NSESDVEAAPS---------KKIRRQFTETQKRTLFAIFKETKKPTKDMQKAVAEELGLDLNSVANFFMNARRRH 174

HSP 2 Score: 57.7658 bits (138), Expect = 2.536e-9
Identity = 28/76 (36.84%), Postives = 50/76 (65.79%), Query Frame = 2

Query: 1634 LDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQ--DSTRVQELK 1855
            +D   +A ++ + L  + I Q +FAK VLN SQGT+S+LL KPKPW+++   G+  +++M +W +  +  R+ +L+
Sbjct:   25 IDTKAMALKLTEELRRYHIPQAVFAKKVLNRSQGTLSDLLRKPKPWNEM-RLGKAIFKRMKEWLELPEVKRIPQLR 99

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Medaka
Match: cux1a (cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868])

HSP 1 Score: 140.969 bits (354), Expect = 3.407e-33
Identity = 74/188 (39.36%), Postives = 107/188 (56.91%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LL++PK W++LS KG+EP+VRMQLWL+ P  +  L+  +   K  +   +  + S    +   L    DY     +  +  +              KK R+V    +K  L   Y+  PYP  + +EE++ +LN+   T+ NWFHNYR R
Sbjct:  726 LDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLQDPHSVEKLMDMKRLEKKAYMKRRLSSLSDGHLVDGGLPGS-DYVQGSQSPGQQQL--------------KKPRVVLGPEEKEALKKAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSR 898

HSP 2 Score: 83.9593 bits (206), Expect = 9.307e-16
Identity = 36/85 (42.35%), Postives = 61/85 (71.76%), Query Frame = 2

Query: 1619 IDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            +D  ++D  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW+KL+ +G++ + KM Q+  D   +  L+SI  R+
Sbjct:  271 LDGEDMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMRQFLADEQNILALRSIQGRQ 355

HSP 3 Score: 80.4925 bits (197), Expect = 1.278e-14
Identity = 33/65 (50.77%), Postives = 52/65 (80.00%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
            ++DT  I+  V+E LI +N+GQ++FG  +L LSQGSVSE+L++PK WN+L+ +GKEP+ +M+ +L
Sbjct:  275 DMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMRQFL 339

HSP 4 Score: 80.4925 bits (197), Expect = 1.278e-14
Identity = 33/74 (44.59%), Postives = 55/74 (74.32%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQEL 1852
            ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LL++PKPW KLS KGR+ + +M  W QD   V++L
Sbjct:  725 ELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLQDPHSVEKL 798

HSP 5 Score: 77.411 bits (189), Expect = 1.063e-13
Identity = 35/72 (48.61%), Postives = 53/72 (73.61%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFK 2887
            E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+L+RPK W  L+ KGREP++RM  +L  P++ +
Sbjct:  725 ELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLQDPHSVE 796

HSP 6 Score: 72.4034 bits (176), Expect = 3.830e-12
Identity = 32/69 (46.38%), Postives = 51/69 (73.91%), Query Frame = 2

Query: 2663 LQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            L  ++++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W+ LT +G+EP+ +M ++L
Sbjct:  271 LDGEDMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMRQFL 339

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Medaka
Match: cux2b (cut like homeobox 2 [Source:NCBI gene;Acc:101170027])

HSP 1 Score: 139.428 bits (350), Expect = 1.334e-32
Identity = 77/191 (40.31%), Postives = 112/191 (58.64%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKS-AISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  ++ L + +   K  +   ++   S  S + SP   +E          C +  ++   L   N+   KK R+V    +K  L   Y + PYP    +E ++ +L++   T+ NWFHNYR R +
Sbjct: 1031 LDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYGLLSTGSDSDSPSTRSE----------CVSPASASLDLCPFNQV--KKPRVVLGAEEKEALRKAYLLEPYPSQNTIEMLASQLSLKTNTVINWFHNYRSRMR 1209

HSP 2 Score: 87.8113 bits (216), Expect = 7.420e-17
Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQT 3523
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   LS  T
Sbjct:  866 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL--DQLGQSLSQPT 941

HSP 3 Score: 85.8853 bits (211), Expect = 3.174e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  865 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 930

HSP 4 Score: 82.0333 bits (201), Expect = 3.970e-15
Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            +LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+
Sbjct:  499 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQ 579

HSP 5 Score: 81.6481 bits (200), Expect = 5.955e-15
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
             LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  499 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 563

HSP 6 Score: 81.2629 bits (199), Expect = 6.591e-15
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 2

Query: 2636 NPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            NP    +    + E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct: 1017 NPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1100

HSP 7 Score: 81.2629 bits (199), Expect = 7.804e-15
Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = 2

Query: 1478 NTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            N + + LV+ + T P+    + +   ++   N +      G+ E   + P ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V +L+++
Sbjct:  986 NQQPDSLVIGLPTHPEGGKSTSSLMTLHQPTNPL------GIQELVAMSP-ELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAM 1106

HSP 8 Score: 77.411 bits (189), Expect = 1.035e-13
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 2

Query: 2669 NDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +D+++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  497 DDQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 563

HSP 9 Score: 75.0998 bits (183), Expect = 5.845e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  865 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 931

[Close]

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKS-AISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  ++ L + +   K  +   ++   S  S + SP   +E          C +  ++   L   N+   KK R+V    +K  L   Y + PYP    +E ++ +L++   T+ NWFHNYR R +
Sbjct: 1031 LDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYGLLSTGSDSDSPSTRSE----------CVSPASASLDLCPFNQV--KKPRVVLGAEEKEALRKAYLLEPYPSQNTIEMLASQLSLKTNTVINWFHNYRSRMR 1209

HSP 2 Score: 87.8113 bits (216), Expect = 7.420e-17
Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQT 3523
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   LS  T
Sbjct:  866 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL--DQLGQSLSQPT 941

HSP 3 Score: 85.8853 bits (211), Expect = 3.174e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  865 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 930

HSP 4 Score: 82.0333 bits (201), Expect = 3.970e-15
Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            +LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+
Sbjct:  499 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQ 579

HSP 5 Score: 81.6481 bits (200), Expect = 5.955e-15
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
             LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  499 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 563

HSP 6 Score: 81.2629 bits (199), Expect = 6.591e-15
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 2

Query: 2636 NPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            NP    +    + E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct: 1017 NPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1100

HSP 7 Score: 81.2629 bits (199), Expect = 7.804e-15
Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = 2

Query: 1478 NTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            N + + LV+ + T P+    + +   ++   N +      G+ E   + P ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V +L+++
Sbjct:  986 NQQPDSLVIGLPTHPEGGKSTSSLMTLHQPTNPL------GIQELVAMSP-ELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAM 1106

HSP 8 Score: 77.411 bits (189), Expect = 1.035e-13
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 2

Query: 2669 NDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +D+++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  497 DDQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 563

HSP 9 Score: 75.0998 bits (183), Expect = 5.845e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  865 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 931

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Medaka
Match: cux2b (cut like homeobox 2 [Source:NCBI gene;Acc:101170027])

HSP 1 Score: 139.043 bits (349), Expect = 1.683e-32
Identity = 77/191 (40.31%), Postives = 112/191 (58.64%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKS-AISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNK 3859
            LDT+AI+  V+EVL  NNLGQ+LFGE IL L+QGSVS+LLS+PK W++LS KG+EP+VRMQLWL  P  ++ L + +   K  +   ++   S  S + SP   +E          C +  ++   L   N+   KK R+V    +K  L   Y + PYP    +E ++ +L++   T+ NWFHNYR R +
Sbjct: 1093 LDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYGLLSTGSDSDSPSTRSE----------CVSPASASLDLCPFNQV--KKPRVVLGAEEKEALRKAYLLEPYPSQNTIEMLASQLSLKTNTVINWFHNYRSRMR 1271

HSP 2 Score: 87.8113 bits (216), Expect = 8.611e-17
Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQT 3523
            +DT  ++  V+E L  N + Q++FGE +L LSQGSVS++LS+PK W++L+ KG+EP++RMQLWL   D+L   LS  T
Sbjct:  928 VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL--DQLGQSLSQPT 1003

HSP 3 Score: 85.8853 bits (211), Expect = 3.299e-16
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 2

Query: 2675 EINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLF 2869
            E++T  L   +KE L KN I QR FG  +LGLSQGS+SD+LSRPK WS LT KGREP+IRM  +L 
Sbjct:  927 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLL 992

HSP 4 Score: 82.0333 bits (201), Expect = 4.020e-15
Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRK 1873
            +LD  E+A ++++ L  H+IGQR+F  +VL LSQG+VSE+L++PKPW KL+ KG++ + KM Q+  D   +  L++I  R+
Sbjct:  561 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQ 641

HSP 5 Score: 81.6481 bits (200), Expect = 6.289e-15
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 2

Query: 3287 NLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWL 3481
             LDT  I+  V+E L+ +N+GQ++FG  +L LSQGSVSE+L++PK W +L+ KGKEP+++M+ +L
Sbjct:  561 QLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 625

HSP 6 Score: 81.2629 bits (199), Expect = 6.729e-15
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 2

Query: 2636 NPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNF 2884
            NP    +    + E++T A+   +KE LT N++ QR FG  +LGL+QGS+SD+LSRPK W  L+ KGREP++RM  +L  P+N 
Sbjct: 1079 NPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNV 1162

HSP 7 Score: 81.2629 bits (199), Expect = 8.240e-15
Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = 2

Query: 1478 NTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSI 1861
            N + + LV+ + T P+    + +   ++   N +      G+ E   + P ELD   +  +++++L+ +++GQRLF + +L L+QG+VS+LLS+PKPW KLS KGR+ + +M  W  D   V +L+++
Sbjct: 1048 NQQPDSLVIGLPTHPEGGKSTSSLMTLHQPTNPL------GIQELVAMSP-ELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAM 1168

HSP 8 Score: 77.411 bits (189), Expect = 9.950e-14
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 2

Query: 2669 NDEINTTALVNLIKEHLTKNSISQRTFG-CLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYL 2866
            +D+++T  +   +KE L K++I QR FG  +LGLSQGS+S+IL+RPK W  LT KG+EP+I+M ++L
Sbjct:  559 DDQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 625

HSP 9 Score: 75.0998 bits (183), Expect = 6.430e-13
Identity = 31/67 (46.27%), Postives = 50/67 (74.63%), Query Frame = 2

Query: 1631 ELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQD 1831
            E+D  E+  ++++ L+ + I QR+F + VL LSQG+VS++LS+PKPWSKL++KGR+ + +M  W  D
Sbjct:  927 EVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLD 993

[Close]

BLAST of Homeobox protein cut-like vs. Ensembl Medaka
Match: onecut3b (hepatocyte nuclear factor 6 [Source:NCBI gene;Acc:101171777])

HSP 1 Score: 72.4034 bits (176), Expect = 1.884e-12
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 2

Query: 1592 SNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEK 1945
            S GV    +I   E++  EVA RI   L  +SI Q +FA+ +L+ SQGT+S+LL  PKPWSKL + GR+++R+M +W Q+    Q + ++  R    G    +SPA   KE+   +E+
Sbjct:  268 SQGV-SGSNIQAEEINTKEVAQRITAELKRYSIPQAIFAQRILSRSQGTLSDLLRNPKPWSKL-KSGRETFRRMWKWLQE-PEFQRMSAL--RLMIIGTSPVVSPACKRKEEDRGRER 380

HSP 2 Score: 62.3882 bits (150), Expect = 2.385e-9
Identity = 50/193 (25.91%), Postives = 92/193 (47.67%), Query Frame = 2

Query: 3290 LDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPD--KLNT--LLSNQTSYKYKHNC-NQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            ++T  ++  +   L   ++ Q +F + IL+ SQG++S+LL  PK W++L   G+E + RM  WL++P+  +++   L+   TS      C  + E++ ++ +  P                                  KK R+VFT+ Q+  L++I+     P  E    IS++L + L T++N+F N R R
Sbjct:  281 INTKEVAQRITAELKRYSIPQAIFAQRILSRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQEPEFQRMSALRLMIIGTSPVVSPACKRKEEDRGRERSQVP----------------------------------KKQRLVFTDLQRRTLVAIFRENRRPSKEMQLTISQQLGLELSTVSNFFMNSRRR 438

HSP 3 Score: 53.5286 bits (127), Expect = 1.172e-6
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 2

Query: 2663 LQNDEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            +Q +EINT  +   I   L + SI Q  F   +L  SQG++SD+L  PK WS L + GRE + RM K+L +P   ++S
Sbjct:  276 IQAEEINTKEVAQRITAELKRYSIPQAIFAQRILSRSQGTLSDLLRNPKPWSKLKS-GRETFRRMWKWLQEPEFQRMS 352

[Close]

BLAST of Homeobox protein cut-like vs. Planmine SMEST
Match: SMESG000065026.1 (SMESG000065026.1)

HSP 1 Score: 2620.5 bits (6791), Expect = 0.000e+0
Identity = 1363/1367 (99.71%), Postives = 1364/1367 (99.78%), Query Frame = 2

Query:  254 MIPVSSNYNLQGMSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQVNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNPPPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEYSLLALGISQTINKVKXXXXXXXXXXXCASLISNGVIPMINQSHLFNNSTQLXXXXXXXXXXXXVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALXXXXXXXXXCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVNEIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPNLPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCNNLPTNSILNTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMASTXXXXXXXXXXXVDEELYTYSKPTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAALQSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPXXXXXXXXXXXXXXIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENEDKINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKPDFQIFXXXXXXXXXXXXXXGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDNTGNRTESLSIESDINSEKSFPTNKDESCLNEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGSNNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQENISSFNSYCSKVQKLE 4354
            MIPVSSNYNLQGMSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQVNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNPPPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEYSLLALGISQTINKVKLNQINQLNQLNCASLISNGVIPMINQSHLFNNSTQLSSTPSDTTPISSVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALNNNNNNSSNCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVNEIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPNLPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCNNLPTNSILNTRREPLVVSMSTT KDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMASTNNSNNNNQQSNVDEELYTYSKPTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAALQSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPSSLVMSSNNSSLVSIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENEDKINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTK DFQIFSNHSPPNSSSSPMSGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQT+YKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDN GNRTESLSIESDINSEKSFPTNKDESCLNEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGSNNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQENISSFNSYCSKVQKLE
Sbjct:    1 MIPVSSNYNLQGMSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQVNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNPPPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEYSLLALGISQTINKVKLNQINQLNQLNCASLISNGVIPMINQSHLFNNSTQLSSTPSDTTPISSVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALNNNNNNSSNCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVNEIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPNLPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCNNLPTNSILNTRREPLVVSMSTTAKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMASTNNSNNNNQQSNVDEELYTYSKPTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAALQSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPSSLVMSSNNSSLVSIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENEDKINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKTDFQIFSNHSPPNSSSSPMSGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTNYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDNAGNRTESLSIESDINSEKSFPTNKDESCLNEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGSNNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQENISSFNSYCSKVQKLE 1367

[Close]

BLAST of Homeobox protein cut-like vs. Planmine SMEST
Match: SMESG000065026.1 (SMESG000065026.1)

HSP 1 Score: 2596.62 bits (6729), Expect = 0.000e+0
Identity = 1351/1355 (99.70%), Postives = 1352/1355 (99.78%), Query Frame = 2

Query:  290 MSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQVNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNPPPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEYSLLALGISQTINKVKXXXXXXXXXXXCASLISNGVIPMINQSHLFNNSTQLXXXXXXXXXXXXVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALXXXXXXXXXCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVNEIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPNLPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCNNLPTNSILNTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMASTXXXXXXXXXXXVDEELYTYSKPTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAALQSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPXXXXXXXXXXXXXXIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENEDKINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKPDFQIFXXXXXXXXXXXXXXGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDNTGNRTESLSIESDINSEKSFPTNKDESCLNEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGSNNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQENISSFNSYCSKVQKLE 4354
            MSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQVNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNPPPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEYSLLALGISQTINKVKLNQINQLNQLNCASLISNGVIPMINQSHLFNNSTQLSSTPSDTTPISSVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALNNNNNNSSNCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVNEIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPNLPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCNNLPTNSILNTRREPLVVSMSTT KDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMASTNNSNNNNQQSNVDEELYTYSKPTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAALQSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPSSLVMSSNNSSLVSIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENEDKINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTK DFQIFSNHSPPNSSSSPMSGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQT+YKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDN GNRTESLSIESDINSEKSFPTNKDESCLNEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGSNNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQENISSFNSYCSKVQKLE
Sbjct:    1 MSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQVNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNPPPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEYSLLALGISQTINKVKLNQINQLNQLNCASLISNGVIPMINQSHLFNNSTQLSSTPSDTTPISSVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALNNNNNNSSNCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVNEIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPNLPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCNNLPTNSILNTRREPLVVSMSTTAKDPNLSINNDVINDTNNMIDEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAKMAMASTNNSNNNNQQSNVDEELYTYSKPTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAALQSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPSSLVMSSNNSSLVSIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENEDKINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFADDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKTDFQIFSNHSPPNSSSSPMSGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNESFTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSKERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTNYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMRNKTGRCLTVNCTNEHGNYLDNAGNRTESLSIESDINSEKSFPTNKDESCLNEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGSNNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQENISSFNSYCSKVQKLE 1355

[Close]

BLAST of Homeobox protein cut-like vs. Planmine SMEST
Match: SMESG000007728.1 (SMESG000007728.1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.931e-12
Identity = 40/118 (33.90%), Postives = 67/118 (56.78%), Query Frame = 2

Query: 1613 EDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILND 1966
            ++ D  +L+  ++A RI   L  +SI Q +FA+ VL  SQGT+S+LL  PKPWSKL + GR+++R+M +W  +    +  +  + R   +G      P TP  E+ +  +K + +  D
Sbjct:  287 DNADMEDLNTKDLAQRISAELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRRMCKWLNEP---EAYRMASLRTAIAGKRKDDLPKTP--EEQKQSKKPRLVFTD 398

HSP 2 Score: 53.5286 bits (127), Expect = 1.248e-6
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            +++NT  L   I   L + SI Q  F   +L  SQG++SD+L  PK WS L   GRE + RM K+L +P  ++++
Sbjct:  292 EDLNTKDLAQRISAELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMCKWLNEPEAYRMA 365

[Close]

BLAST of Homeobox protein cut-like vs. Planmine SMEST
Match: SMESG000007728.1 (SMESG000007728.1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.718e-12
Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 2

Query: 1580 DEVESNGVHEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILND 1966
            DE   N + ++ D++  +L+  ++A RI   L  +SI Q +FA+ VL  SQGT+S+LL  PKPWSKL + GR+++R+M +W  +    +  +  + R   +G      P TP  E+ +  +K + +  D
Sbjct:  226 DEDNINDLSDNADME--DLNTKDLAQRISAELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRRMCKWLNEP---EAYRMASLRTAIAGKRKDDLPKTP--EEQKQSKKPRLVFTD 346

HSP 2 Score: 53.5286 bits (127), Expect = 1.127e-6
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            +++NT  L   I   L + SI Q  F   +L  SQG++SD+L  PK WS L   GRE + RM K+L +P  ++++
Sbjct:  240 EDLNTKDLAQRISAELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMCKWLNEPEAYRMA 313

[Close]

BLAST of Homeobox protein cut-like vs. Planmine SMEST
Match: SMESG000007728.1 (SMESG000007728.1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.931e-12
Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 2

Query: 1613 EDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELLSKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMSPATPIKEDHETQEKIKRILNDAK 1972
            ++ D  +L+  ++A RI   L  +SI Q +FA+ VL  SQGT+S+LL  PKPWSKL + GR+++R+M +W  +     E   +A  +  +G      P TP  E+ +  +K + +  D +
Sbjct:  287 DNADMEDLNTKDLAQRISAELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRRMCKWLNEP----EAYRMASLRTATGKRKDDLPKTP--EEQKQSKKPRLVFTDIQ 399

HSP 2 Score: 65.855 bits (159), Expect = 1.868e-10
Identity = 44/170 (25.88%), Postives = 75/170 (44.12%), Query Frame = 2

Query: 3344 LGQKLFGECILNLSQGSVSELLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQHENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGRIVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR 3853
            + Q +F + +L  SQG++S+LL  PK W++L   G+E + RM  WL +P+          + K K +  +   + K+S                                      KK R+VFT+ Q+  L +I++    P  E    I+++LN+ + T+ N+F N R R
Sbjct:  312 IPQAVFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMCKWLNEPEAYRMASLRTATGKRKDDLPKTPEEQKQS--------------------------------------KKPRLVFTDIQRRTLHAIFKETKRPSKEMQTTIAQQLNLDVSTVANFFMNARRR 442

HSP 3 Score: 53.5286 bits (127), Expect = 1.247e-6
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 2

Query: 2672 DEINTTALVNLIKEHLTKNSISQRTFGC-LLGLSQGSISDILSRPKQWSLLTNKGREPYIRMLKYLFKPNNFKVS 2893
            +++NT  L   I   L + SI Q  F   +L  SQG++SD+L  PK WS L   GRE + RM K+L +P  ++++
Sbjct:  292 EDLNTKDLAQRISAELKRYSIPQAVFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMCKWLNEPEAYRMA 365

The following BLAST results are available for this feature:

BLAST of Homeobox protein cut-like vs. Ensembl Human
BLAST of Homeobox protein cut-like vs. Ensembl Celegans
BLAST of Homeobox protein cut-like vs. Ensembl Fly
BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
BLAST of Homeobox protein cut-like vs. Ensembl Mouse
BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
BLAST of Homeobox protein cut-like vs. TrEMBL
BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
BLAST of Homeobox protein cut-like vs. Ensembl Sea Lamprey
BLAST of Homeobox protein cut-like vs. Ensembl Yeast
BLAST of Homeobox protein cut-like vs. Ensembl Nematostella
BLAST of Homeobox protein cut-like vs. Ensembl Medaka
BLAST of Homeobox protein cut-like vs. Planmine SMEST

BLAST of Homeobox protein cut-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CUX1	5.752e-35	39.36	cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
CUX1	6.476e-35	39.36	cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
CUX1	6.801e-35	39.36	cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
CUX1	7.169e-35	39.36	cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
CUX1	7.234e-35	39.36	cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ceh-44	1.672e-16	62.50	Homeobox protein cut-like ceh-44 [Source:UniProtK...	[more]
ceh-38	5.758e-14	28.35	Homeobox protein ceh-38 [Source:UniProtKB/Swiss-P...	[more]
ceh-38	5.875e-14	28.35	Homeobox protein ceh-38 [Source:UniProtKB/Swiss-P...	[more]
ceh-38	6.547e-14	28.35	Homeobox protein ceh-38 [Source:UniProtKB/Swiss-P...	[more]
ceh-38	6.547e-14	28.35	Homeobox protein ceh-38 [Source:UniProtKB/Swiss-P...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ct	1.991e-32	36.89	gene:FBgn0004198 transcript:FBtr0305134	[more]
ct	2.527e-32	36.89	gene:FBgn0004198 transcript:FBtr0331733	[more]
ct	2.549e-32	36.89	gene:FBgn0004198 transcript:FBtr0071068	[more]
onecut	1.055e-10	47.14	gene:FBgn0028996 transcript:FBtr0089104	[more]
onecut	1.055e-10	47.14	gene:FBgn0028996 transcript:FBtr0310610	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cux1a	3.912e-35	39.18	cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030...	[more]
cux1a	3.974e-35	39.18	cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030...	[more]
cux1a	4.052e-35	39.18	cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030...	[more]
cux2b	7.898e-32	39.09	cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081...	[more]
cux2b	8.706e-32	39.09	cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
c3	7.317e-37	40.96	complement component 3 [Source:Xenbase;Acc:XB-GENE...	[more]
c3	8.572e-37	40.96	complement component 3 [Source:Xenbase;Acc:XB-GENE...	[more]
c3	3.136e-36	40.86	complement component 3 [Source:Xenbase;Acc:XB-GENE...	[more]
c3	3.480e-36	40.86	complement component 3 [Source:Xenbase;Acc:XB-GENE...	[more]
s1pr4	5.130e-33	40.84	sphingosine-1-phosphate receptor 4 [Source:Xenbase...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Cux1	1.160e-35	40.96	cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:885...	[more]
Cux1	1.258e-35	40.96	cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:885...	[more]
Cux1	1.311e-35	40.96	cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:885...	[more]
Cux1	1.334e-35	40.96	cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:885...	[more]
Cux1	1.530e-35	40.96	cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:885...	[more]

BLAST of Homeobox protein cut-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P39881\|CUX1_CANLF	4.305e-35	41.49	Homeobox protein cut-like 1 (Fragment) OS=Canis lu...	[more]
sp\|P53565\|CUX1_RAT	8.585e-35	40.96	Homeobox protein cut-like 1 OS=Rattus norvegicus O...	[more]
sp\|P53564\|CUX1_MOUSE	8.783e-35	40.96	Homeobox protein cut-like 1 OS=Mus musculus OX=100...	[more]
sp\|P39880\|CUX1_HUMAN	3.484e-34	39.36	Homeobox protein cut-like 1 OS=Homo sapiens OX=960...	[more]
sp\|P70298\|CUX2_MOUSE	8.909e-33	37.79	Homeobox protein cut-like 2 OS=Mus musculus OX=100...	[more]

BLAST of Homeobox protein cut-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A3R7P616	1.900e-46	32.93	Homeobox protein cut-like OS=Penaeus vannamei OX=6...	[more]
A0A401PN68	4.137e-46	33.83	Homeobox protein cut-like OS=Scyliorhinus torazame...	[more]
A0A401S0Y8	3.520e-42	32.43	Homeobox protein cut-like OS=Chiloscyllium punctat...	[more]
L5LJG3	4.933e-42	31.65	Homeobox protein cut-like OS=Myotis davidii OX=225...	[more]
A0A0P7WZK1	1.171e-35	40.43	One cut domain family member OS=Scleropages formos...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cux1a	2.983e-36	41.36	cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030...	[more]
cux2b	1.012e-31	38.00	cut like homeobox 2 [Source:NCBI gene;Acc:10304371...	[more]
cux2b	1.024e-31	38.00	cut like homeobox 2 [Source:NCBI gene;Acc:10304371...	[more]
cux2b	1.147e-31	38.00	cut like homeobox 2 [Source:NCBI gene;Acc:10304371...	[more]
ENSAMXT00000036001.1	1.497e-28	30.54	homeobox protein cut-like 1 [Source:NCBI gene;Acc:...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
onecut3a	2.426e-13	50.75	one cut homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-0502...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Homeobox protein cut-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO45004	8.378e-14	26.98	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Homeobox protein cut-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cux1a	3.407e-33	39.36	cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030...	[more]
cux2b	1.334e-32	40.31	cut like homeobox 2 [Source:NCBI gene;Acc:10117002...	[more]
cux2b	1.334e-32	40.31	cut like homeobox 2 [Source:NCBI gene;Acc:10117002...	[more]
cux2b	1.683e-32	40.31	cut like homeobox 2 [Source:NCBI gene;Acc:10117002...	[more]
onecut3b	1.884e-12	38.98	hepatocyte nuclear factor 6 [Source:NCBI gene;Acc:...	[more]

BLAST of Homeobox protein cut-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000065026.1	0.000e+0	99.71	SMESG000065026.1	[more]
SMESG000065026.1	0.000e+0	99.70	SMESG000065026.1	[more]
SMESG000007728.1	1.931e-12	33.90	SMESG000007728.1	[more]
SMESG000007728.1	2.718e-12	33.33	SMESG000007728.1	[more]
SMESG000007728.1	2.931e-12	34.17	SMESG000007728.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30016218 ID=SMED30016218|Name=Homeobox protein cut-like|organism=Schmidtea mediterranea sexual|type=transcript|length=4414bp
AAACAGCTACTATTATCTTACCTTGTTGTTGCTACTGTGGTTCTGTGTGT
CTCTATATTTTGAGGATGGAACGGAGTTAAAATATATTAGTAAAACTACT
ATTTATTAATTCAATGTGTGTACATACACTCAAATGATTGACTCTTGTAA
CGATGGAAATTATTTGATGCAGTTTACAATATGTTCGATTGTATTTAGCA
GATAATGATTTAACTGAAGGAAAAAACCCCAGTTTTATTCAACGAAATAA
CCGATGATTCCTGTCTCCTCAAATTACAACCTTCAAGGGATGTCTACGTT
AAATTTCAATAACATTATTACAAATCCAAACCAGACAACTCTACCAATAT
CTGCATTAGGGAATATTCTTCAGCTTCATTGCAATCCATCATTGACATTG
CAAGTAAACGGGACCTCGCCAATTATTCCGGTATCAACTAAAGAAAGTTC
AACGCAAGATCAGTTGAACACTCAAATTAACACGCTTCGAAATATTTTTC
CTTCGCAGCAGACTTATCAGAATTTATCTCAACCTGAACAATGTACAAAT
CCGCCTCCAAGGAGCTTCAATCAATTGATCCAAGAACTTTTATCTACATA
TCAAGATCAGCAGGAAAACCTTTCACAGCTAACGATCAAATACAATTTTC
TCTTAAATGCAATGGAAAGATTGCTTTTCGATGTACAGAATAATGTTGAA
TATTCTTTATTGGCATTGGGGATTTCTCAAACGATTAACAAAGTAAAACT
CAACCAAATCAATCAACTTAACCAGCTCAATTGTGCTTCTCTCATATCAA
ATGGAGTTATACCGATGATCAATCAGTCTCATCTGTTCAACAACAGCACT
CAGCTGTCAAGTACGCCATCCGACACGACACCAATATCATCAGTAATTGA
CTTAACGAATCAACGCACGAAACCCGATTCCACAACTGTGATGGCGTCGA
GCATGGAGAAAAAGGTCGATTCAAACAAATTAGATTTCAATGCTTTGAAT
AACAACAACAACAACAGCTCAAATTGTAAGAAAATGACAAGTCTCGATAA
ACTCGACAAACTAATAGACGAGACAGTAAAAAAGTCTACTAATAGAGTTT
CGATATCAGAGGAAAATTGCCATAGTCCGACATCGAAATCTCAGCTGGTA
AATGAGATTGTACAGGCACCAGCTAACGCAATCAACTATAACATGGGGAA
CGCAATACAGCAAATTATTCGACAGTTTTACCAAAACGCTTCTCTTAATG
CTGACAACATTGGAATTAATGGAACGACGACGACTGAATCCAATTTTCCT
AACTTACCGTTGATTTCATCGAGATCGCACTTGGAGCACATTAAAACCTC
GATGAATAACTTTACTCAACAAGTCACAGAAATCATAGGAAACACAACAA
TTCCATTCAACAATTTAGCAAATCGAACGAACCATTCGTTCATTCTTTGC
AATAATCTGCCGACAAATTCGATTTTGAATACTCGACGAGAACCGTTGGT
CGTTTCAATGAGTACTACTCCGAAGGATCCAAATCTATCCATTAATAATG
ATGTCATCAATGATACGAATAACATGATTGATGAAGTCGAATCGAATGGG
GTTCATGAAGACGAAGATATTGATCCAGCAGAACTTGATCCAACTGAAGT
TGCGACACGAATTAGAGACATTTTGAGTTTACATAGTATTGGACAGAGGC
TTTTTGCCAAACATGTGTTGAATTTAAGTCAGGGAACGGTTAGTGAGCTG
TTATCCAAACCAAAACCATGGTCGAAGTTATCAGAAAAAGGCAGAGATAG
TTATCGGAAAATGAACCAATGGGCGCAAGATTCGACACGGGTTCAAGAAT
TGAAATCAATTGCACCTCGTAAAGGGTTTTCCGGTCATTATGCTGGTATG
AGTCCAGCAACACCAATTAAAGAAGATCATGAAACCCAGGAAAAAATTAA
ACGAATATTAAATGATGCAAAAATGGCAATGGCATCCACTAATAACAGTA
ATAATAACAATCAACAGTCTAATGTCGATGAAGAATTATACACCTATTCG
AAACCAACAGATTCCAATCATAACAATCAACCAAACGAATGTTCACAAAT
TTCATACATGGCCGGCAATCCAGTGACAACTGTGTCCAGTGAGATAACAT
CCAATGTACTCGAATTTGACATCAGTCAATTGCAAAAGAAAATCGCTGCT
TTACAATCCACAGTCATTTCCGGTTCCGTTGTGACAGATTCTTTGCCACA
AATATCAGGATCATTAAATTGTCAGCAATCTCCACTAATTTTAATGAACT
TTTCTAACATTGTTCCATCATCGTTGGTAATGAGTTCGAATAATTCATCT
TTGGTTTCTATAGCTCCGAACACTCAAACCTCAAAATCTGCACAGGATAA
TCGTGAGATTAAAAACGAACCAAATACAACTCAATGCTATAACTCAGATA
ATTCAGATATAGAGGTCACGAAATCAAACAGCGATAACACTGAGAATGAA
GATAAAATAAATAGCACAAATAATTTGGAAATGCATCCAATATCTGACCA
TCTCGAATCGAAAAATGTACATAGTGTCAATTTTAAAGCTTCTATAGAGC
ATGAAAACTTTGAAAAACTGTTAAAATCCTTTATGAATCCAGCAAAATTC
GCAGATGATTCTTTGCAAAACGACGAAATCAACACAACAGCACTTGTAAA
TTTGATCAAGGAGCATTTGACCAAAAATTCGATCAGCCAAAGAACTTTTG
GATGCTTATTAGGTTTATCACAAGGCAGTATATCGGATATCCTTTCAAGA
CCAAAACAATGGTCATTATTAACAAACAAGGGTAGAGAACCTTATATACG
AATGTTGAAATATCTTTTCAAACCGAACAATTTCAAAGTTTCTGATAACG
GTTCGAATAAAATCGAAAATACAAAGCCGGATTTCCAAATTTTCTCCAAT
CACTCACCACCGAATTCTTCGTCAAGTCCAATGTCTGGTGCTGGGTCTCG
TGAATTTGAGAGAAGTAAAAACTTTTCATCAGAATCGAACCATCAAAAAA
TCAACATATTGTCTAATACAGAAAATACGATGGATTATCAAGATAACGAA
AGTTTTACAGGATCGAGATCTTGTTCAACTGAGGGTAGGGAATATGACAG
TTATGATGAAGACATAATTAATGTCAATGGGGAACTTTGTGGGGCGGAAA
TAACTAATTTTGATCAATTAGATTTAGAAAGCTGGAAATTCGATGATTCA
AAAGAAAGACTATTTAATTTAACTAGAAGAATCGTAAACCTAGACACATT
TGCCATTAGTAATGCAGTAAGAGAAGTATTAATTACGAATAATTTGGGTC
AAAAACTGTTTGGTGAATGCATTTTAAACTTAAGTCAAGGCTCAGTCAGT
GAATTGCTATCGAAACCAAAAGCCTGGAACCAATTAAGCTTTAAAGGCAA
AGAACCATATGTCCGTATGCAACTCTGGCTAAGGCAACCCGATAAGCTAA
ACACTCTACTCAGTAACCAAACCAGTTACAAATATAAGCATAATTGCAAT
CAGCATGAAAATCAATCGAAAAAATCCGCCATCAGTCCAAAACTGGAAAA
CGAAATCGATTATGAAATTCTGATCAATAATAATTGTGAAACACATATCA
ATTCGAAAAGTTCTCTACAAACCACCAACAAATTCAACCATAAAAAAGGT
AGAATCGTTTTCACAGAATCTCAGAAAGCCGAATTGTTATCGATTTACGA
GATTTGTCCGTATCCCAGAACAGAACATTTGGAAGAAATATCTAAAAAAC
TCAACATACCCCTGAAGACCATAAACAATTGGTTTCATAATTATCGAATG
CGAAATAAAACTGGGAGATGCCTGACAGTCAATTGTACCAATGAGCATGG
GAATTATCTGGATAATACTGGCAACCGCACAGAATCGTTGTCAATAGAAT
CTGATATCAATTCGGAGAAATCCTTTCCAACGAACAAAGATGAATCGTGT
TTAAATGAACAATATTCTTATGATGGAAGCGAAAGTGAAAGTTCAATGCC
GGCTCCTCATTTATATCCGGAATCGACGCAACTCGAGTGTGTTTCGGTGG
AGAACAATTTGAATGACAACAATTTCGTCGAAGATGAAATCGGATTCGGT
TCAAATAATTCTATTAATCTTTCAGTTCAAAACATTGCTGGCAGTAACAA
ACGAAAAAGAGCCAATCCAATCAAACTGGAAATGGTGGTGTCGAAGATTT
CCAACAAAGATCAAGATGTTCATTATTCCCGATCTGGAGACCATGAAGGT
CAAGAGAATATTTCTTCATTCAATTCCTATTGCAGCAAAGTCCAGAAACT
CGAATGAATTAATTATATATGATTTGAAGACATTTAAATTTCTATTTTCA
TGACTGAGATCGGA

protein sequence of SMED30016218-orf-1

>SMED30016218-orf-1 ID=SMED30016218-orf-1|Name=SMED30016218-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1368bp
MIPVSSNYNLQGMSTLNFNNIITNPNQTTLPISALGNILQLHCNPSLTLQ
VNGTSPIIPVSTKESSTQDQLNTQINTLRNIFPSQQTYQNLSQPEQCTNP
PPRSFNQLIQELLSTYQDQQENLSQLTIKYNFLLNAMERLLFDVQNNVEY
SLLALGISQTINKVKLNQINQLNQLNCASLISNGVIPMINQSHLFNNSTQ
LSSTPSDTTPISSVIDLTNQRTKPDSTTVMASSMEKKVDSNKLDFNALNN
NNNNSSNCKKMTSLDKLDKLIDETVKKSTNRVSISEENCHSPTSKSQLVN
EIVQAPANAINYNMGNAIQQIIRQFYQNASLNADNIGINGTTTTESNFPN
LPLISSRSHLEHIKTSMNNFTQQVTEIIGNTTIPFNNLANRTNHSFILCN
NLPTNSILNTRREPLVVSMSTTPKDPNLSINNDVINDTNNMIDEVESNGV
HEDEDIDPAELDPTEVATRIRDILSLHSIGQRLFAKHVLNLSQGTVSELL
SKPKPWSKLSEKGRDSYRKMNQWAQDSTRVQELKSIAPRKGFSGHYAGMS
PATPIKEDHETQEKIKRILNDAKMAMASTNNSNNNNQQSNVDEELYTYSK
PTDSNHNNQPNECSQISYMAGNPVTTVSSEITSNVLEFDISQLQKKIAAL
QSTVISGSVVTDSLPQISGSLNCQQSPLILMNFSNIVPSSLVMSSNNSSL
VSIAPNTQTSKSAQDNREIKNEPNTTQCYNSDNSDIEVTKSNSDNTENED
KINSTNNLEMHPISDHLESKNVHSVNFKASIEHENFEKLLKSFMNPAKFA
DDSLQNDEINTTALVNLIKEHLTKNSISQRTFGCLLGLSQGSISDILSRP
KQWSLLTNKGREPYIRMLKYLFKPNNFKVSDNGSNKIENTKPDFQIFSNH
SPPNSSSSPMSGAGSREFERSKNFSSESNHQKINILSNTENTMDYQDNES
FTGSRSCSTEGREYDSYDEDIINVNGELCGAEITNFDQLDLESWKFDDSK
ERLFNLTRRIVNLDTFAISNAVREVLITNNLGQKLFGECILNLSQGSVSE
LLSKPKAWNQLSFKGKEPYVRMQLWLRQPDKLNTLLSNQTSYKYKHNCNQ
HENQSKKSAISPKLENEIDYEILINNNCETHINSKSSLQTTNKFNHKKGR
IVFTESQKAELLSIYEICPYPRTEHLEEISKKLNIPLKTINNWFHNYRMR
NKTGRCLTVNCTNEHGNYLDNTGNRTESLSIESDINSEKSFPTNKDESCL
NEQYSYDGSESESSMPAPHLYPESTQLECVSVENNLNDNNFVEDEIGFGS
NNSINLSVQNIAGSNKRKRANPIKLEMVVSKISNKDQDVHYSRSGDHEGQ
ENISSFNSYCSKVQKLE*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000099	neuron
PLANA:0000418	head
PLANA:0002089	reproductive organ

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	Homeobox_dom
IPR003350	CUT_dom
IPR009057	Homeobox-like_sf
IPR010982	Lambda_DNA-bd_dom_sf
IPR017970	Homeobox_CS

Vocabulary: **molecular function**
Term	Definition
GO:0003677	DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **biological process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1236..1262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 706..734
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1236..1267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 897..914
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 897..939
None	No IPR available	PANTHER	PTHR14043:SF5	HOMEOBOX PROTEIN CUT-LIKE 2	coord: 423..588 coord: 1011..1223 coord: 803..874
None	No IPR available	PANTHER	PTHR14043	CCAAT DISPLACEMENT PROTEIN-RELATED	coord: 803..874
None	No IPR available	PANTHER	PTHR14043	CCAAT DISPLACEMENT PROTEIN-RELATED	coord: 423..588 coord: 1011..1223
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 1146..1208 e-value: 1.7E-12 score: 57.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 1147..1202 e-value: 1.8E-13 score: 50.1
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1144..1204 score: 13.394
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 1147..1202 e-value: 2.88463E-13 score: 63.8016
IPR003350	CUT domain	SMART	SM01109	CUT_2	coord: 454..539 e-value: 1.4E-30 score: 117.6 coord: 1005..1089 e-value: 1.5E-22 score: 90.9 coord: 801..886 e-value: 1.7E-17 score: 74.1
IPR003350	CUT domain	PFAM	PF02376	CUT	coord: 459..531 e-value: 5.0E-23 score: 81.1 coord: 806..876 e-value: 8.9E-17 score: 61.0 coord: 1012..1082 e-value: 1.4E-21 score: 76.4
IPR003350	CUT domain	PROSITE	PS51042	CUT	coord: 452..539 score: 31.09
IPR003350	CUT domain	PROSITE	PS51042	CUT	coord: 1004..1091 score: 26.896
IPR003350	CUT domain	PROSITE	PS51042	CUT	coord: 800..886 score: 20.057
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	G3DSA:1.10.260.40		coord: 1003..1089 e-value: 2.1E-27 score: 96.7 coord: 801..881 e-value: 5.7E-22 score: 79.3
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	G3DSA:1.10.260.40		coord: 461..544 e-value: 1.6E-29 score: 103.7
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	coord: 995..1093
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	coord: 457..536
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	coord: 805..877
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 1179..1202
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 1143..1202

Main menu

Homeobox protein cut-like

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Owlery

blazegraph-runner