SMED30016196
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016196 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 25Note: Hover over icons to view figure legend
Alignments
SMED30016196 aligns in the following genomic locations:
Homology
BLAST of SMED30016196 vs. Ensembl Human
Match: CNBP (CCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]) HSP 1 Score: 82.0333 bits (201), Expect = 1.097e-18 Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDC---TESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 155 HSP 2 Score: 80.8777 bits (198), Expect = 3.285e-18 Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP ++ CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTG------------GGRGRGMRSRGRDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 117
BLAST of SMED30016196 vs. Ensembl Human
Match: CNBP (CCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]) HSP 1 Score: 82.4185 bits (202), Expect = 1.436e-18 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE-----CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R RG Q + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 134 HSP 2 Score: 78.1814 bits (191), Expect = 4.554e-17 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK--------------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 172
BLAST of SMED30016196 vs. Ensembl Human
Match: CNBP (CCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]) HSP 1 Score: 82.0333 bits (201), Expect = 1.569e-18 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVS--SSLPDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 127 HSP 2 Score: 80.8777 bits (198), Expect = 3.774e-18 Identity = 54/187 (28.88%), Postives = 85/187 (45.45%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK-------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 165
BLAST of SMED30016196 vs. Ensembl Human
Match: CNBP (CCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]) HSP 1 Score: 82.0333 bits (201), Expect = 1.753e-18 Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE-----CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R RG Q + CY C ESGH++++C Q CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQED----VEACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 136 HSP 2 Score: 78.1814 bits (191), Expect = 5.056e-17 Identity = 54/194 (27.84%), Postives = 84/194 (43.30%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK--------------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDL---------------------QEDVEACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 174
BLAST of SMED30016196 vs. Ensembl Human
Match: CNBP (CCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]) HSP 1 Score: 81.6481 bits (200), Expect = 1.999e-18 Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R + CY C ESGH++++C Q CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVS--SSLPDICYRCGESGHLAKDCDLQED----VEACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 129 HSP 2 Score: 80.8777 bits (198), Expect = 4.954e-18 Identity = 54/187 (28.88%), Postives = 84/187 (44.92%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK-------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL---------------------QEDVEACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 167
BLAST of SMED30016196 vs. Ensembl Celegans
Match: K08D12.3 (pep chromosome:WBcel235:IV:1710265:1711127:1 gene:WBGene00019537.1 transcript:K08D12.3a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:K08D12.3) HSP 1 Score: 62.3882 bits (150), Expect = 7.076e-12 Identity = 58/153 (37.91%), Postives = 75/153 (49.02%), Query Frame = 1
Query: 220 CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGES------GHMARDC------------NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQS--EKKCYKCNKIGHMSREC 618
C+ C + GH+SR CP S GG R G+ CYNC E+GH SR+CPK S G + G G GH +RDC G + R KCYNC ++GH+SREC S EK+CY+C + GH+SR+C
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRG------------GGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146 HSP 2 Score: 60.8474 bits (146), Expect = 2.393e-11 Identity = 59/165 (35.76%), Postives = 78/165 (47.27%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCT---ESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNG--------------CYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN 558
MS R CY C + GH+SR+C G C+NC E+GH SR+CP+ GS GG R GG G + GH SR+CP RS G CY CG SGH++R+C + GS + +CY C + GH+SR+CP+
Sbjct: 1 MSDR--NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGR-----------GHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGS----AEEKRCYQCQETGHISRDCPS 148 HSP 3 Score: 48.9062 bits (115), Expect = 3.615e-7 Identity = 44/119 (36.97%), Postives = 57/119 (47.90%), Query Frame = 1
Query: 349 CYNCHESGHMSRECPKQRSNGPRS-----NGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQN----GHMSRECPNGQSE------------------KKCYKCNKIGHMSRECNE 624
CY C + GH+SR CP S+G R + CY C E+GH +RDC + GS Q N GH SR+CP+ +SE +KCY C + GH+SREC E
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTE 124
BLAST of SMED30016196 vs. Ensembl Celegans
Match: glh-4 (ATP-dependent RNA helicase glh-4 [Source:UniProtKB/Swiss-Prot;Acc:O76743]) HSP 1 Score: 52.7582 bits (125), Expect = 1.561e-7 Identity = 44/143 (30.77%), Postives = 61/143 (42.66%), Query Frame = 1
Query: 202 GPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN----GQSEKKCYKCNKIGHMSREC 618
G R C NCGE GH+S+EC + C NC + GH + +C + R PR C CG GH A DC+Q + + C NC Q GH +++C N + + C +C + GH EC
Sbjct: 566 GERPRGCHNCGEEGHISKECDKPKVPRF--------------------PCRNCEQLGHFASDCDQPRV--PRGP-CRNCGIEGHFAVDCDQP-----KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
BLAST of SMED30016196 vs. Ensembl Celegans
Match: glh-4 (ATP-dependent RNA helicase glh-4 [Source:UniProtKB/Swiss-Prot;Acc:O76743]) HSP 1 Score: 52.7582 bits (125), Expect = 1.561e-7 Identity = 44/143 (30.77%), Postives = 61/143 (42.66%), Query Frame = 1
Query: 202 GPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN----GQSEKKCYKCNKIGHMSREC 618
G R C NCGE GH+S+EC + C NC + GH + +C + R PR C CG GH A DC+Q + + C NC Q GH +++C N + + C +C + GH EC
Sbjct: 566 GERPRGCHNCGEEGHISKECDKPKVPRF--------------------PCRNCEQLGHFASDCDQPRV--PRGP-CRNCGIEGHFAVDCDQP-----KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
BLAST of SMED30016196 vs. Ensembl Celegans
Match: glh-1 (ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]) HSP 1 Score: 50.8322 bits (120), Expect = 5.622e-7 Identity = 46/127 (36.22%), Postives = 60/127 (47.24%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQN---------------XXXXXXXXXXXXXXXXXXXXNQRG-TECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDC 468
C+NC + GH S DC E +K PR C+NC + GH SREC + G G+ G G +RG +C+NC GH S ECP+ PR GC+ CGE GH + +C
Sbjct: 160 CFNCQQPGHRSSDCPEPRKERE-PR--VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEP----PR--GCFNCGEQGHRSNEC 277
BLAST of SMED30016196 vs. Ensembl Celegans
Match: glh-2 (ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]) HSP 1 Score: 50.8322 bits (120), Expect = 6.486e-7 Identity = 43/142 (30.28%), Postives = 59/142 (41.55%), Query Frame = 1
Query: 202 GPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQ---VKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
G R+ CFNC + GH S +CP+ R CYNC + GH SR+CP++R NG G+ + +KC+NC GH S ECP + + C+ C + GH S EC
Sbjct: 367 GERNNNCFNCQQPGHRSNDCPEPKKEREPRV------------------CYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECP--EPPRGCFNCGEQGHRSNEC 488
BLAST of SMED30016196 vs. Ensembl Fly
Match: CNBP (gene:FBgn0034802 transcript:FBtr0303464) HSP 1 Score: 77.411 bits (189), Expect = 3.846e-17 Identity = 57/190 (30.00%), Postives = 83/190 (43.68%), Query Frame = 1
Query: 121 SRRMECYNCGKDGHMSRDCTESKKSGSGPRSGA----------------------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CY C + GH +RDC+ G G G C+ C + GH +R CP+ CY C+ GH+S++C +++ P CY+C ++GH R+C E + R V CY CN+ GH+S+ CP ++ K CY C K GH+ REC+E
Sbjct: 2 SMSATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFGHFARACPEE-----------------------AERCYRCNGIGHISKDC--TQADNP---TCYRCNKTGHWVRNC-PEAVNERGPTNVSCYKCNRTGHISKNCP--ETSKTCYGCGKSGHLRRECDE 160 HSP 2 Score: 62.7734 bits (151), Expect = 9.198e-12 Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRG---TECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDN 489
CY C GH+S+DCT++ C+ C ++GH R CP+ N+RG CY C+ +GH+S+ CP+ S CY CG+SGH+ R+C+++G N
Sbjct: 77 CYRCNGIGHISKDCTQADNP-------TCYRCNKTGHWVRNCPE-------------------AVNERGPTNVSCYKCNRTGHISKNCPET------SKTCYGCGKSGHLRRECDEKGGRN 165
BLAST of SMED30016196 vs. Ensembl Fly
Match: CNBP (gene:FBgn0034802 transcript:FBtr0071994) HSP 1 Score: 77.411 bits (189), Expect = 3.846e-17 Identity = 57/190 (30.00%), Postives = 83/190 (43.68%), Query Frame = 1
Query: 121 SRRMECYNCGKDGHMSRDCTESKKSGSGPRSGA----------------------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CY C + GH +RDC+ G G G C+ C + GH +R CP+ CY C+ GH+S++C +++ P CY+C ++GH R+C E + R V CY CN+ GH+S+ CP ++ K CY C K GH+ REC+E
Sbjct: 2 SMSATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFGHFARACPEE-----------------------AERCYRCNGIGHISKDC--TQADNP---TCYRCNKTGHWVRNC-PEAVNERGPTNVSCYKCNRTGHISKNCP--ETSKTCYGCGKSGHLRRECDE 160 HSP 2 Score: 62.7734 bits (151), Expect = 9.198e-12 Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRG---TECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDN 489
CY C GH+S+DCT++ C+ C ++GH R CP+ N+RG CY C+ +GH+S+ CP+ S CY CG+SGH+ R+C+++G N
Sbjct: 77 CYRCNGIGHISKDCTQADNP-------TCYRCNKTGHWVRNCPE-------------------AVNERGPTNVSCYKCNRTGHISKNCPET------SKTCYGCGKSGHLRRECDEKGGRN 165
BLAST of SMED30016196 vs. Ensembl Zebrafish
Match: cnbpa (CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]) HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-20 Identity = 56/174 (32.18%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESKKSGSGP----RSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
M EC+ CG+ GH ++C + + + C+ CGE GH++R+C Q CYNCH SGH+SR+C + + R CY CG++GH+ARDC+ N Q KCY+C GH+ + C + KCY+C +IGH++ +C++
Sbjct: 1 MDMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTE-----------------------DACYNCHRSGHISRDCKEPKKE--REQCCYNCGKAGHVARDCDHA---NEQ----KCYSCGGFGHIQKLC----DKVKCYRCGEIGHVAVQCSK 138 HSP 2 Score: 82.4185 bits (202), Expect = 5.269e-19 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
+ + CY CG+ GH++RDC +++ AC+NC SGH+SR+C + +R CYNC ++GH++R+C + CY CG GH+ + C+ +VKCY C + GH++ +C +E CY C K GH++R+C+
Sbjct: 36 KDLFCYRCGEQGHIARDCEQTED--------ACYNCHRSGHISRDCKE-------------------PKKEREQCCYNCGKAGHVARDC-----DHANEQKCYSCGGFGHIQKLCD----------KVKCYRCGEIGHVAVQCSKA-TEVNCYNCGKTGHLARDCS 158
BLAST of SMED30016196 vs. Ensembl Zebrafish
Match: cnbpa (CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]) HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-20 Identity = 56/174 (32.18%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESKKSGSGP----RSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
M EC+ CG+ GH ++C + + + C+ CGE GH++R+C Q CYNCH SGH+SR+C + + R CY CG++GH+ARDC+ N Q KCY+C GH+ + C + KCY+C +IGH++ +C++
Sbjct: 1 MDMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTE-----------------------DACYNCHRSGHISRDCKEPKKE--REQCCYNCGKAGHVARDCDHA---NEQ----KCYSCGGFGHIQKLC----DKVKCYRCGEIGHVAVQCSK 138 HSP 2 Score: 82.4185 bits (202), Expect = 5.269e-19 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
+ + CY CG+ GH++RDC +++ AC+NC SGH+SR+C + +R CYNC ++GH++R+C + CY CG GH+ + C+ +VKCY C + GH++ +C +E CY C K GH++R+C+
Sbjct: 36 KDLFCYRCGEQGHIARDCEQTED--------ACYNCHRSGHISRDCKE-------------------PKKEREQCCYNCGKAGHVARDC-----DHANEQKCYSCGGFGHIQKLCD----------KVKCYRCGEIGHVAVQCSKA-TEVNCYNCGKTGHLARDCS 158
BLAST of SMED30016196 vs. Ensembl Zebrafish
Match: cnbpa (CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]) HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-20 Identity = 56/174 (32.18%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESKKSGSGP----RSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
M EC+ CG+ GH ++C + + + C+ CGE GH++R+C Q CYNCH SGH+SR+C + + R CY CG++GH+ARDC+ N Q KCY+C GH+ + C + KCY+C +IGH++ +C++
Sbjct: 1 MDMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTE-----------------------DACYNCHRSGHISRDCKEPKKE--REQCCYNCGKAGHVARDCDHA---NEQ----KCYSCGGFGHIQKLC----DKVKCYRCGEIGHVAVQCSK 138 HSP 2 Score: 82.4185 bits (202), Expect = 5.269e-19 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
+ + CY CG+ GH++RDC +++ AC+NC SGH+SR+C + +R CYNC ++GH++R+C + CY CG GH+ + C+ +VKCY C + GH++ +C +E CY C K GH++R+C+
Sbjct: 36 KDLFCYRCGEQGHIARDCEQTED--------ACYNCHRSGHISRDCKE-------------------PKKEREQCCYNCGKAGHVARDC-----DHANEQKCYSCGGFGHIQKLCD----------KVKCYRCGEIGHVAVQCSKA-TEVNCYNCGKTGHLARDCS 158
BLAST of SMED30016196 vs. Ensembl Zebrafish
Match: cnbpb (CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]) HSP 1 Score: 82.0333 bits (201), Expect = 8.974e-19 Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSGA----CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE-----------GSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH ++C + + R C+ CGE GH++R+C + CYNC GH+SR+C + + R CY CG++GHMARDC+ G + +VKCY C + GH++ +C SE CY C K GH+++EC
Sbjct: 5 ECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE-----------------------DACYNCGRGGHISRDCKEPKKE--REQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGCEKVKCYRCGEIGHVAVQCSKA-SEVNCYNCGKSGHVAKECT 156 HSP 2 Score: 73.559 bits (179), Expect = 1.141e-15 Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
S CF CG +GH + CP R RG + CY C E GH++R+C + + CY CG GH++RDC + ++ER+ CYNC + GHM+R+C + +E+KCY C GH+ + C
Sbjct: 3 SNECFGCGRTGHWIKNCPN-----------AGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE------DACYNCGRGGHISRDCKEP----KKEREQVCYNCGKAGHMARDCDHA-NEQKCYSCGGFGHIQKGC 116 HSP 3 Score: 56.6102 bits (135), Expect = 1.587e-9 Identity = 37/120 (30.83%), Postives = 54/120 (45.00%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
R CYNCGK GHM+RDC + + C++CG GH+ + C + +CY C E GH++ +C K CY CG+SGH+A++C E +
Sbjct: 78 REQVCYNCGKAGHMARDCDHANEQ-------KCYSCGGFGHIQKGCEK-------------------------VKCYRCGEIGHVAVQCSK-----ASEVNCYNCGKSGHVAKECTIEAT 160
BLAST of SMED30016196 vs. Ensembl Zebrafish
Match: cnbpb (CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]) HSP 1 Score: 82.0333 bits (201), Expect = 8.974e-19 Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSGA----CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE-----------GSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH ++C + + R C+ CGE GH++R+C + CYNC GH+SR+C + + R CY CG++GHMARDC+ G + +VKCY C + GH++ +C SE CY C K GH+++EC
Sbjct: 5 ECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE-----------------------DACYNCGRGGHISRDCKEPKKE--REQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGCEKVKCYRCGEIGHVAVQCSKA-SEVNCYNCGKSGHVAKECT 156 HSP 2 Score: 73.559 bits (179), Expect = 1.141e-15 Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
S CF CG +GH + CP R RG + CY C E GH++R+C + + CY CG GH++RDC + ++ER+ CYNC + GHM+R+C + +E+KCY C GH+ + C
Sbjct: 3 SNECFGCGRTGHWIKNCPN-----------AGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE------DACYNCGRGGHISRDCKEP----KKEREQVCYNCGKAGHMARDCDHA-NEQKCYSCGGFGHIQKGC 116 HSP 3 Score: 56.6102 bits (135), Expect = 1.587e-9 Identity = 37/120 (30.83%), Postives = 54/120 (45.00%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
R CYNCGK GHM+RDC + + C++CG GH+ + C + +CY C E GH++ +C K CY CG+SGH+A++C E +
Sbjct: 78 REQVCYNCGKAGHMARDCDHANEQ-------KCYSCGGFGHIQKGCEK-------------------------VKCYRCGEIGHVAVQCSK-----ASEVNCYNCGKSGHVAKECTIEAT 160
BLAST of SMED30016196 vs. Ensembl Xenopus
Match: rfc4 (Xenopus tropicalis terminal uridylyl transferase 7 (tut7), mRNA. [Source:RefSeq mRNA;Acc:NM_001310103]) HSP 1 Score: 50.8322 bits (120), Expect = 1.421e-6 Identity = 35/141 (24.82%), Postives = 55/141 (39.01%), Query Frame = 1
Query: 202 GPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE-CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEG-----------SDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKC 588
P C CG+ GH ++CP + + NQR TE + SR KQ SN P+ K + A + N+E S++R+ R+ +C+ C + H+ +ECP + Y C
Sbjct: 1125 APNDRCCRICGKIGHFMKDCPMRRKVRRRKNENAGNQRYPETRNQRMTEEAASKGAENETSRLDGKQTSNTPK-----KPKQGARGANEANREKPQRLPTEKWRRSEDREPREKRCFLCGKEDHIKKECPQYKGAVGKYNC 1260
BLAST of SMED30016196 vs. Ensembl Mouse
Match: Zcchc13 (zinc finger, CCHC domain containing 13 [Source:MGI Symbol;Acc:MGI:1922314]) HSP 1 Score: 83.1889 bits (204), Expect = 3.636e-19 Identity = 57/192 (29.69%), Postives = 89/192 (46.35%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESK-------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE-----------GSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
MSS+ C+ CG GH +R+C + + + +S C+ CGE+GH +++C + CYNC GH++++C + + R CY C + GH+ARDCN++ G + Q+KCY C +NGHM+ C SE CY+C + GH++REC
Sbjct: 1 MSSK--SCFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDC-----------------------DLLQDTCYNCGRRGHIAKDCTQAKRE--REQCCYICSQPGHLARDCNRQEEQKCYTCGEFGHIQKDCTQIKCYRCGENGHMAVNCSK-TSEVSCYRCGESGHLAREC 164 HSP 2 Score: 82.8037 bits (203), Expect = 5.064e-19 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S +CF CG SGH +RECP+ G+RG RG NQ CY C E+GH +++C + + CY CG GH+A+DC Q ++ER+ CY C+Q GH++R+C N Q E+KCY C + GH+ ++C +
Sbjct: 3 SKSCFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTA-NQSDV-CYRCGETGHYAKDCDLLQ------DTCYNCGRRGHIAKDCTQA----KREREQCCYICSQPGHLARDC-NRQEEQKCYTCGEFGHIQKDCTQ 127 HSP 3 Score: 79.337 bits (194), Expect = 9.590e-18 Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECP 555
CYNCG+ GH+++DCT++K+ R C+ C + GH++R+C Q +CY C E GH+ ++C + + CY+CGE+GHMA +C++ +V CY C ++GH++RECP
Sbjct: 67 CYNCGRRGHIAKDCTQAKRE----REQCCYICSQPGHLARDC----------------------NRQEEQKCYTCGEFGHIQKDCTQIK--------CYRCGENGHMAVNCSKTS-------EVSCYRCGESGHLARECP 165 HSP 4 Score: 58.9214 bits (141), Expect = 3.085e-10 Identity = 42/139 (30.22%), Postives = 61/139 (43.88%), Query Frame = 1
Query: 67 FVCIRIGIHIFD*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
+ C R G D ++ R CY C + GH++RDC ++ C+ CGE GH+ ++C Q +CY C E+GHM+ C K CY+CGESGH+AR+C E +
Sbjct: 68 YNCGRRGHIAKDCTQAKREREQCCYICSQPGHLARDCNRQEEQ-------KCYTCGEFGHIQKDCTQ-------------------------IKCYRCGENGHMAVNCSK-----TSEVSCYRCGESGHLARECPIEAT 169
BLAST of SMED30016196 vs. Ensembl Mouse
Match: Cnbp (cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]) HSP 1 Score: 82.8037 bits (203), Expect = 5.236e-19 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDI-CYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 128 HSP 2 Score: 80.4925 bits (197), Expect = 3.687e-18 Identity = 54/188 (28.72%), Postives = 85/188 (45.21%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK--------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 166
BLAST of SMED30016196 vs. Ensembl Mouse
Match: Cnbp (cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]) HSP 1 Score: 82.4185 bits (202), Expect = 9.856e-19 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE-----CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R RG Q + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 134 HSP 2 Score: 78.1814 bits (191), Expect = 3.127e-17 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK--------------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 172
BLAST of SMED30016196 vs. Ensembl Mouse
Match: Cnbp (cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]) HSP 1 Score: 82.4185 bits (202), Expect = 9.856e-19 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE-----CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R RG Q + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 134 HSP 2 Score: 78.1814 bits (191), Expect = 3.127e-17 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK--------------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 172
BLAST of SMED30016196 vs. Ensembl Mouse
Match: Cnbp (cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]) HSP 1 Score: 82.0333 bits (201), Expect = 1.077e-18 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVS--SSLPDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 127 HSP 2 Score: 80.8777 bits (198), Expect = 2.591e-18 Identity = 54/187 (28.88%), Postives = 85/187 (45.45%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK-------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 165
BLAST of SMED30016196 vs. UniProt/SwissProt
Match: sp|Q04832|HEXP_LEIMA (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.863e-32 Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 624
+R ++ M C+ CG+ GHMSRDC S K G+ + C+ CG+ GH+SR+CP + G R + G CY C ++GH+SR+CP + +G CYKCG++GH++RDC Q G +R KCY C ++GHMSRECP G ++ CYKC K GH+SREC E
Sbjct: 62 ARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGA-AKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR--KCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECPE 239 HSP 2 Score: 115.931 bits (289), Expect = 1.184e-29 Identity = 77/196 (39.29%), Postives = 102/196 (52.04%), Query Frame = 1
Query: 112 KMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGA--CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNG-----------------CYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ------SEKKCYKCNKIGHMSREC 618
K R C+ CG++GHMSR+C +SG+ +GA CF CGE+GHMSR+CP + G +G ECY C + GH+SR+CP + G CYKCG++GH++RDC Q G +R CY C GH+SR+CPNGQ ++KCYKC + GHMSREC
Sbjct: 37 KGDERSTTCFRCGEEGHMSRECPNEARSGA---AGAMTCFRCGEAGHMSRDCPNSAKPGA----------------AKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSREC 211 HSP 3 Score: 109.768 bits (273), Expect = 2.467e-27 Identity = 70/197 (35.53%), Postives = 100/197 (50.76%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGP------RSGA---------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQS---------EKKCYKCNKIGHMSREC 618
++ +++ ECY CG++GH+SRDC S+ G RSGA C+ CG++GH+SR+CP CY C ++GH+SR+CP + +G CYKCGESGHM+R+C GS +R CY C + GH+SRECP ++ CYKC + GH+SR+C
Sbjct: 89 AKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT---------------CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSGDRA--CYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268 HSP 4 Score: 95.1301 bits (235), Expect = 7.752e-22 Identity = 56/144 (38.89%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQV---KCYNCNQNGHMSRECPN 558
CY CG GH+SRDC + SG C+ CG++GH+SR+CP +CY C ESGHMSRECP S G CYKCG+ GH++R+C + G R CY C + GH+SR+CP+
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---------------KCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270 HSP 5 Score: 92.4337 bits (228), Expect = 8.177e-21 Identity = 58/158 (36.71%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQ-RSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ---------------------SEKKCYKCNKIGHMSREC 618
S +C NCG+ GH +RECP+ D +G++R T C+ C E GHMSRECP + RS + C++CGE+GHM+RDC + +CY C Q GH+SR+CP+ Q ++ CYKC GH+SR+C
Sbjct: 15 STSCRNCGKEGHYARECPE----------------ADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPG-AAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDC 155 HSP 6 Score: 61.6178 bits (148), Expect = 8.044e-10 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECP 393
+CY CG+ GHMSR+C + +GSG R AC+ CG+ GH+SRECP+ G G RGG +R CY C E+GH+SR+CP
Sbjct: 197 KCYKCGESGHMSRECPSAGSTGSGDR--ACYKCGKPGHISRECPEAGGSYGGSRGGGDRT------------CYKCGEAGHISRDCP 269 HSP 7 Score: 58.5362 bits (140), Expect = 9.482e-9 Identity = 33/84 (39.29%), Postives = 43/84 (51.19%), Query Frame = 1
Query: 418 SNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN-----GQSEKKCYKCNKIGHMSRECNE*SYLGDKAFF 654
S C CG+ GH AR+C + S ER C+ C + GHMSRECPN C++C + GHMSR+C + G F
Sbjct: 15 STSCRNCGKEGHYARECPEADSKG-DERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGF 97
BLAST of SMED30016196 vs. UniProt/SwissProt
Match: sp|P53849|GIS2_YEAST (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIS2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.481e-25 Identity = 69/188 (36.70%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 58 KILFVCIRIGIHIFD*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSN-GCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
K +VC +IG H+ + S R+ CYNC K GH+ DCT + C+NCGE+GH+ EC C+NC+++GH+SRECP+ + S CYKCG HMA+DC +E + +KCY C Q GHMSR+C Q+++ CY CN+ GH+S++C
Sbjct: 4 KACYVCGKIG-HL---AEDCDSERL-CYNCNKPGHVQTDCTMPRTV----EFKQCYNCGETGHVRSECTVQ-------------------------RCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGIS----GLKCYTCGQAGHMSRDC---QNDRLCYNCNETGHISKDC 150 HSP 2 Score: 79.7221 bits (195), Expect = 3.643e-17 Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNG 561
+CYNCG+ GH+ +CT + CFNC ++GH+SRECP+ + CY C HM+++C K+ +G CY CG++GHM+RDC + CYNCN+ GH+S++CP
Sbjct: 48 QCYNCGETGHVRSECTVQR----------CFNCNQTGHISRECPEPKKTSRFSK----------------VSCYKCGGPNHMAKDCMKE--DGISGLKCYTCGQAGHMSRDCQNDRL---------CYNCNETGHISKDCPKA 153 HSP 3 Score: 58.151 bits (139), Expect = 3.140e-9 Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 349 CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
CY C + GH++ +C +R CY C + GH+ DC R +CYNC + GH+ EC + ++C+ CN+ GH+SREC E
Sbjct: 6 CYVCGKIGHLAEDCDSERL-------CYNCNKPGHVQTDCTMP----RTVEFKQCYNCGETGHVRSEC----TVQRCFNCNQTGHISRECPE 82
BLAST of SMED30016196 vs. UniProt/SwissProt
Match: sp|O65639|CSP1_ARATH (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.676e-23 Identity = 68/186 (36.56%), Postives = 94/186 (50.54%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGA-------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE------CYNCHESGHMSRECPKQ------RSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECP-----NGQSEKKCYKCNKIGHMSRECN 621
CYNCG GH +RDCT + G+G + GA C+ CG+ GH++R+C Q G +QRG CY C + GH +R+C ++ RS G S CY CG GH+ARDC + RQ + CY C +GH++R+C G ++ CYKC K GH +REC+
Sbjct: 134 CYNCGDTGHFARDCTSA---GNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNG---------------DQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATK----RQPSR-GCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECS 296 HSP 2 Score: 90.1225 bits (222), Expect = 7.513e-20 Identity = 59/148 (39.86%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGA-------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN 558
CY CG GH++RDCT+ K G+G + GA C+ CG+ GH +R+C Q + G R GG CY+C GH++R+C +R S GCY+CG SGH+ARDC+Q GS CY C + GH +REC +
Sbjct: 166 CYTCGDVGHVARDCTQ-KSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSG-----------TCYSCGGVGHIARDCATKR---QPSRGCYQCGGSGHLARDCDQRGSGGGGNDNA-CYKCGKEGHFARECSS 297 HSP 3 Score: 89.3521 bits (220), Expect = 1.508e-19 Identity = 59/186 (31.72%), Postives = 89/186 (47.85%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDC----TESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE------CYNCHESGHMSRECP-KQRSNGPR-------SNGCYKCGESGHMARDCNQEGSDNRQER----QVKCYNCNQNGHMSRECPNG-QSEKKCYKCNKIGHMSRECNE 624
CYNCG+ GH+S+DC C+NCG++GH +R+C G+QRG CY C + GH++R+C K NG + ++GCY CG+ GH ARDC Q+ + CY+C GH++R+C Q + CY+C GH++R+C++
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTS-----------------AGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQ 270
BLAST of SMED30016196 vs. UniProt/SwissProt
Match: sp|P36627|BYR3_SCHPO (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=byr3 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.049e-20 Identity = 59/172 (34.30%), Postives = 84/172 (48.84%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNG----------CYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
CYNC + GH + +CTE ++ + C+ CG +GH+ R+CP + + ++G ECY C GH++R+C R+NG +S G CY CG GH ARDC VKCY+C + GH S EC + CYKCN+ GH++ C
Sbjct: 38 CYNCNQTGHKASECTEPQQEKT------CYACGTAGHLVRDCPSSPNP------------------RQGAECYKCGRVGHIARDC---RTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG---------VKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCT 173 HSP 2 Score: 87.4261 bits (215), Expect = 8.760e-20 Identity = 60/169 (35.50%), Postives = 80/169 (47.34%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNG-CYKCGESGHMARDCNQEGSDNR-----QERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
CYNCG++GH +R+CT + C+NC ++GH + EC + Q+ CY C +GH+ R+CP S PR CYKCG GH+ARDC G + + CY C GH +R+C G KCY C KIGH S EC +
Sbjct: 19 CYNCGENGHQARECT---------KGSICYNCNQTGHKASECTEP---------------------QQEKTCYACGTAGHLVRDCPS--SPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG---VKCYSCGKIGHRSFECQQ 152 HSP 3 Score: 65.4698 bits (158), Expect = 9.673e-12 Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 340 GTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSREC---PNGQSEKKCYKCNKIGHMSREC 618
G CYNC E+GH +REC K + CY C ++GH A +C ++ +QE+ CY C GH+ R+C PN + +CYKC ++GH++R+C
Sbjct: 16 GPRCYNCGENGHQARECTK-------GSICYNCNQTGHKASEC----TEPQQEK--TCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDC 98 HSP 4 Score: 61.6178 bits (148), Expect = 2.813e-10 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 391 PKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
P+ GPR CY CGE+GH AR+C + GS CYNCNQ GH + EC Q EK CY C GH+ R+C
Sbjct: 10 PQTTRPGPR---CYNCGENGHQARECTK-GSI--------CYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDC 73 HSP 5 Score: 55.4546 bits (132), Expect = 4.355e-8 Identity = 48/144 (33.33%), Postives = 68/144 (47.22%), Query Frame = 1
Query: 58 KILFVCIRIGIHIFD*SRKMSSRR-MECYNCGKDGHMSRDC-TESKKSG---SGPRSGA-CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN 471
K + C G + D + R+ ECY CG+ GH++RDC T ++SG G RS C+ CG GH +R+C G +CY+C + GH S EC +Q S+G CYKC + GH+A +C
Sbjct: 58 KTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDC------------------------TMGVKCYSCGKIGHRSFEC-QQASDGQL---CYKCNQPGHIAVNCT 173
BLAST of SMED30016196 vs. UniProt/SwissProt
Match: sp|P62634|CNBP_RAT (Cellular nucleic acid-binding protein OS=Rattus norvegicus OX=10116 GN=Cnbp PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.895e-18 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTE-----CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH +RECP G RG R RG Q + CY C ESGH++++C Q + CY CG GH+A+DC + ++ER+ CYNC + GH++R+C + E+KCY C + GH+ ++C +
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQE------DACYNCGRGGHIAKDCKEP----KREREQCCYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDCTK 134 HSP 2 Score: 78.1814 bits (191), Expect = 2.187e-16 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESK--------------------KSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCN-----------QEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH +R+C + S C+ CGESGH++++C + + CYNC GH++++C + + R CY CG+ GH+ARDC+ + G + +VKCY C + GH++ C SE CY+C + GH++REC
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDC-----------------------DLQEDACYNCGRGGHIAKDCKEPKRE--REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK-TSEVNCYRCGESGHLARECT 172
BLAST of SMED30016196 vs. TrEMBL
Match: A0A5K1VCT4 (Universal minicircle sequence binding protein - putative OS=Leishmania infantum OX=5671 GN=LINF_360022800 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.887e-31 Identity = 77/181 (42.54%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 624
+R ++ M C+ CG+ GHMSRDC S K G+ + C+NCG+ GH+SR+CP + G R + G CY C ++GH+SR+CP + +G CYKCG++GH++RDC Q G +R KCY C ++GHMSRECP NG ++ CYKC K GH+SREC E
Sbjct: 62 ARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGA-AKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR--KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPE 239 HSP 2 Score: 115.931 bits (289), Expect = 4.327e-27 Identity = 82/209 (39.23%), Postives = 105/209 (50.24%), Query Frame = 1
Query: 100 D*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXX-----------XXXXXXXXXXNQRGTECYNCHESGHMSRECP-------------KQRSNGPRSNG----CYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ------SEKKCYKCNKIGHMSREC 618
D R + C NCGK+GH +R+C E+ G G RS CF CGE GHM+RECP G + + G +G ECYNC + GH+SR+CP + RS G CYKCG++GH++RDC Q G +R CY C GH+SR+CPNGQ ++KCYKC + GHMSREC
Sbjct: 6 DVKRPRTESSTSCRNCGKEGHYARECPEADSKGDG-RSTTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSREC 211 HSP 3 Score: 112.464 bits (280), Expect = 8.760e-26 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSG------PRSGA---------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNG---------QSEKKCYKCNKIGHMSREC 618
++ +++ ECYNCG++GH+SRDC S+ G RSGA C+ CG++GH+SR+CP CY C ++GH+SR+CP + +G CYKCGESGHM+R+C GS+ +R CY C + GH+SRECP ++ CYKC + GH+SR+C
Sbjct: 89 AKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT---------------CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSNGSGDRT--CYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268 HSP 4 Score: 95.9005 bits (237), Expect = 1.191e-19 Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQV---KCYNCNQNGHMSRECPN 558
CY CG GH+SRDC + SG C+ CG++GH+SR+CP +CY C ESGHMSRECP SNG CYKCG+ GH++R+C + G R CY C + GH+SR+CP+
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---------------KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
BLAST of SMED30016196 vs. TrEMBL
Match: A4IDD5 (Putative universal minicircle sequence binding protein (UMSBP) OS=Leishmania infantum OX=5671 GN=HEXBP PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.887e-31 Identity = 77/181 (42.54%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 624
+R ++ M C+ CG+ GHMSRDC S K G+ + C+NCG+ GH+SR+CP + G R + G CY C ++GH+SR+CP + +G CYKCG++GH++RDC Q G +R KCY C ++GHMSRECP NG ++ CYKC K GH+SREC E
Sbjct: 62 ARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGA-AKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR--KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPE 239 HSP 2 Score: 115.931 bits (289), Expect = 4.327e-27 Identity = 82/209 (39.23%), Postives = 105/209 (50.24%), Query Frame = 1
Query: 100 D*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXX-----------XXXXXXXXXXNQRGTECYNCHESGHMSRECP-------------KQRSNGPRSNG----CYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ------SEKKCYKCNKIGHMSREC 618
D R + C NCGK+GH +R+C E+ G G RS CF CGE GHM+RECP G + + G +G ECYNC + GH+SR+CP + RS G CYKCG++GH++RDC Q G +R CY C GH+SR+CPNGQ ++KCYKC + GHMSREC
Sbjct: 6 DVKRPRTESSTSCRNCGKEGHYARECPEADSKGDG-RSTTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSREC 211 HSP 3 Score: 112.464 bits (280), Expect = 8.760e-26 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSG------PRSGA---------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNG---------QSEKKCYKCNKIGHMSREC 618
++ +++ ECYNCG++GH+SRDC S+ G RSGA C+ CG++GH+SR+CP CY C ++GH+SR+CP + +G CYKCGESGHM+R+C GS+ +R CY C + GH+SRECP ++ CYKC + GH+SR+C
Sbjct: 89 AKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT---------------CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSNGSGDRT--CYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268 HSP 4 Score: 95.9005 bits (237), Expect = 1.191e-19 Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQV---KCYNCNQNGHMSRECPN 558
CY CG GH+SRDC + SG C+ CG++GH+SR+CP +CY C ESGHMSRECP SNG CYKCG+ GH++R+C + G R CY C + GH+SR+CP+
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---------------KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
BLAST of SMED30016196 vs. TrEMBL
Match: E9BTN1 (Universal minicircle sequence binding protein (UMSBP), putative OS=Leishmania donovani (strain BPK282A1) OX=981087 GN=LDBPK_361720 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.887e-31 Identity = 77/181 (42.54%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 624
+R ++ M C+ CG+ GHMSRDC S K G+ + C+NCG+ GH+SR+CP + G R + G CY C ++GH+SR+CP + +G CYKCG++GH++RDC Q G +R KCY C ++GHMSRECP NG ++ CYKC K GH+SREC E
Sbjct: 62 ARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGA-AKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR--KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPE 239 HSP 2 Score: 115.931 bits (289), Expect = 4.327e-27 Identity = 82/209 (39.23%), Postives = 105/209 (50.24%), Query Frame = 1
Query: 100 D*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXX-----------XXXXXXXXXXNQRGTECYNCHESGHMSRECP-------------KQRSNGPRSNG----CYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ------SEKKCYKCNKIGHMSREC 618
D R + C NCGK+GH +R+C E+ G G RS CF CGE GHM+RECP G + + G +G ECYNC + GH+SR+CP + RS G CYKCG++GH++RDC Q G +R CY C GH+SR+CPNGQ ++KCYKC + GHMSREC
Sbjct: 6 DVKRPRTESSTSCRNCGKEGHYARECPEADSKGDG-RSTTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSREC 211 HSP 3 Score: 112.464 bits (280), Expect = 8.760e-26 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSG------PRSGA---------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNG---------QSEKKCYKCNKIGHMSREC 618
++ +++ ECYNCG++GH+SRDC S+ G RSGA C+ CG++GH+SR+CP CY C ++GH+SR+CP + +G CYKCGESGHM+R+C GS+ +R CY C + GH+SRECP ++ CYKC + GH+SR+C
Sbjct: 89 AKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT---------------CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSNGSGDRT--CYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268 HSP 4 Score: 95.9005 bits (237), Expect = 1.191e-19 Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQV---KCYNCNQNGHMSRECPN 558
CY CG GH+SRDC + SG C+ CG++GH+SR+CP +CY C ESGHMSRECP SNG CYKCG+ GH++R+C + G R CY C + GH+SR+CP+
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---------------KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
BLAST of SMED30016196 vs. TrEMBL
Match: A0A3Q8IQS7 (Universal minicircle sequence binding protein, putative OS=Leishmania donovani OX=5661 GN=CGC21_13175 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.887e-31 Identity = 77/181 (42.54%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 624
+R ++ M C+ CG+ GHMSRDC S K G+ + C+NCG+ GH+SR+CP + G R + G CY C ++GH+SR+CP + +G CYKCG++GH++RDC Q G +R KCY C ++GHMSRECP NG ++ CYKC K GH+SREC E
Sbjct: 62 ARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGA-AKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR--KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPE 239 HSP 2 Score: 115.931 bits (289), Expect = 4.327e-27 Identity = 82/209 (39.23%), Postives = 105/209 (50.24%), Query Frame = 1
Query: 100 D*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXX-----------XXXXXXXXXXNQRGTECYNCHESGHMSRECP-------------KQRSNGPRSNG----CYKCGESGHMARDC--NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ------SEKKCYKCNKIGHMSREC 618
D R + C NCGK+GH +R+C E+ G G RS CF CGE GHM+RECP G + + G +G ECYNC + GH+SR+CP + RS G CYKCG++GH++RDC Q G +R CY C GH+SR+CPNGQ ++KCYKC + GHMSREC
Sbjct: 6 DVKRPRTESSTSCRNCGKEGHYARECPEADSKGDG-RSTTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSREC 211 HSP 3 Score: 112.464 bits (280), Expect = 8.760e-26 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSG------PRSGA---------CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRS--NGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNG---------QSEKKCYKCNKIGHMSREC 618
++ +++ ECYNCG++GH+SRDC S+ G RSGA C+ CG++GH+SR+CP CY C ++GH+SR+CP + +G CYKCGESGHM+R+C GS+ +R CY C + GH+SRECP ++ CYKC + GH+SR+C
Sbjct: 89 AKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRT---------------CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSNGSGDRT--CYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268 HSP 4 Score: 95.9005 bits (237), Expect = 1.191e-19 Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQV---KCYNCNQNGHMSRECPN 558
CY CG GH+SRDC + SG C+ CG++GH+SR+CP +CY C ESGHMSRECP SNG CYKCG+ GH++R+C + G R CY C + GH+SR+CP+
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---------------KCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
BLAST of SMED30016196 vs. TrEMBL
Match: W6KZI3 (Uncharacterized protein OS=Phytomonas sp. isolate Hart1 OX=134013 GN=GSHART1_T00002991001 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.332e-30 Identity = 78/180 (43.33%), Postives = 109/180 (60.56%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDC-NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQS--------EKKCYKCNKIGHMSREC 618
++ S+ + CY CG+ GHMSRDC K+G+ +C+NCGESGHMSR+CP+ G R G GD CY+C E+GH+SR+CP +R G C+KCGE+GHM+R+C NQ+G N CYNC ++GH+SRECP+ +S + C+KC ++GH +REC
Sbjct: 64 AKAGSAGNISCYRCGESGHMSRDCPNPAKAGAAGVI-SCYNCGESGHMSRDCPKRSRLGKRDRDGGNAGGDR--------SCYSCGEAGHISRDCPTKRYRGSSDKTCFKCGEAGHMSRECPNQQGGGNGDR---SCYNCGKSGHISRECPDERSGNYQRNGGNRTCHKCGEMGHFAREC 231 HSP 2 Score: 105.916 bits (263), Expect = 1.195e-23 Identity = 67/173 (38.73%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSN-GCYKCGESGHMARDCNQEGSDNRQER-------QVKCYNCNQNGHMSRECPN----GQSEKKCYKCNKIGHMSREC 618
C+ CG GH +R+C S + CF CGE GH SR+C G CY C ESGHMSR+CP G CY CGESGHM+RDC + +++R CY+C + GH+SR+CP G S+K C+KC + GHMSREC
Sbjct: 19 CHKCGNPGHFARECPNSDDRNAAGNDNTCFKCGEKGHYSRDCTNPAKAGSAGN----------------ISCYRCGESGHMSRDCPNPAKAGAAGVISCYNCGESGHMSRDCPKRSRLGKRDRDGGNAGGDRSCYSCGEAGHISRDCPTKRYRGSSDKTCFKCGEAGHMSREC 175 HSP 3 Score: 98.5969 bits (244), Expect = 6.798e-21 Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 130 MECYNCGKDGHMSRDCTESKKSGSGPRSG-------ACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQER--QVKCYNCNQNGHMSRECP 555
+ CYNCG+ GHMSRDC + + G R G +C++CGE+GH+SR+CP RG + C+ C E+GHMSRECP Q+ G CY CG+SGH++R+C E S N Q C+ C + GH +RECP
Sbjct: 99 ISCYNCGESGHMSRDCPKRSRLGKRDRDGGNAGGDRSCYSCGEAGHISRDCPTKRYRGSSDKT-----------------CFKCGEAGHMSRECPNQQGGGNGDRSCYNCGKSGHISRECPDERSGNYQRNGGNRTCHKCGEMGHFARECP 232 HSP 4 Score: 82.4185 bits (202), Expect = 6.344e-15 Identity = 57/161 (35.40%), Postives = 72/161 (44.72%), Query Frame = 1
Query: 220 CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSN-GCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECP-------------NGQSEKKCYKCNKIGHMSRECNE*SYLG--DKAFF 654
C CG GH +RECP + R C+ C E GH SR+C G N CY+CGESGHM+RDC + CYNC ++GHMSR+CP N ++ CY C + GH+SR+C Y G DK F
Sbjct: 19 CHKCGNPGHFARECPNSDDRNAAGND---------------NTCFKCGEKGHYSRDCTNPAKAGSAGNISCYRCGESGHMSRDCPNPAKAG-AAGVISCYNCGESGHMSRDCPKRSRLGKRDRDGGNAGGDRSCYSCGEAGHISRDCPTKRYRGSSDKTCF 163 HSP 5 Score: 58.151 bits (139), Expect = 3.022e-6 Identity = 38/95 (40.00%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 109 RKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECP 393
R S C+ CG+ GHMSR+C + G+G RS C+NCG+SGH+SRECP R + + N C+ C E GH +RECP
Sbjct: 153 RYRGSSDKTCFKCGEAGHMSRECPNQQGGGNGDRS--CYNCGKSGHISRECPD-------------ERSGNYQRNGGNRTCHKCGEMGHFARECP 232
BLAST of SMED30016196 vs. Ensembl Cavefish
Match: cnbpa (cellular nucleic acid-binding protein-like [Source:NCBI gene;Acc:103024401]) HSP 1 Score: 92.8189 bits (229), Expect = 7.532e-23 Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESKKSGSGP----RSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE-----------GSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
M EC+ CG+ GH ++C + + + C+ CGE GH++R+C Q + CYNCH SGH+SR+C + + R CY CG++GH+ARDC+ G + +VKCY C + GH++ +C SE CY C K GH++REC
Sbjct: 1 MDMSSSECFGCGRSGHWVKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDGEAL--------------SPFSQTCYNCHRSGHISRDCKEPKKE--REQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKVKCYRCGEIGHVAVQCSKA-SEVNCYNCGKTGHLARECT 167 HSP 2 Score: 77.411 bits (189), Expect = 4.951e-17 Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQR---SNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
S CF CG SGH + CP R RG + CY C E GH++R+C + + P S CY C SGH++RDC + ++ER+ CYNC + GH++R+C + +E+KCY C GH+ + C++
Sbjct: 5 SSECFGCGRSGHWVKNCPN-----------AGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDGEALSPFSQTCYNCHRSGHISRDCKEP----KKEREQCCYNCGKAGHVARDCDHA-NEQKCYSCGGFGHIQKLCDK 129 HSP 3 Score: 56.6102 bits (135), Expect = 1.358e-9 Identity = 36/116 (31.03%), Postives = 53/116 (45.69%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
CYNCGK GH++RDC + + C++CG GH+ + C + +CY C E GH++ +C K CY CG++GH+AR+C E S
Sbjct: 93 CYNCGKAGHVARDCDHANEQ-------KCYSCGGFGHIQKLCDK-------------------------VKCYRCGEIGHVAVQCSK-----ASEVNCYNCGKTGHLARECTIEAS 171
BLAST of SMED30016196 vs. Ensembl Cavefish
Match: ENSAMXT00000005562.2 (cellular nucleic acid-binding protein [Source:NCBI gene;Acc:103027392]) HSP 1 Score: 81.2629 bits (199), Expect = 1.415e-18 Identity = 55/178 (30.90%), Postives = 83/178 (46.63%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSGA----CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE-----------GSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH ++C + + R C+ CGE GH++R+C + CYNC GH+SR+C + + R CY CG++GH+ARDC+ G + +VKCY C + GH++ +C SE CY C K GH+++EC
Sbjct: 5 ECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE-----------------------DACYNCGRGGHISRDCKEPKKE--REQVCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKGCEKVKCYRCGEIGHVAVQCSKA-SEVNCYNCGKSGHLAKECT 156 HSP 2 Score: 72.4034 bits (176), Expect = 2.851e-15 Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 211 SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
S CF CG +GH + CP R RG + CY C E GH++R+C + + CY CG GH++RDC + ++ER+ CYNC + GH++R+C + +E+KCY C GH+ + C
Sbjct: 3 SNECFGCGRTGHWIKNCPN-----------AGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE------DACYNCGRGGHISRDCKEP----KKEREQVCYNCGKAGHVARDCDHA-NEQKCYSCGGFGHIQKGC 116 HSP 3 Score: 55.8398 bits (133), Expect = 2.449e-9 Identity = 36/120 (30.00%), Postives = 54/120 (45.00%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
R CYNCGK GH++RDC + + C++CG GH+ + C + +CY C E GH++ +C K CY CG+SGH+A++C E +
Sbjct: 78 REQVCYNCGKAGHVARDCDHANEQ-------KCYSCGGFGHIQKGCEK-------------------------VKCYRCGEIGHVAVQCSK-----ASEVNCYNCGKSGHLAKECTIEAT 160
BLAST of SMED30016196 vs. Ensembl Cavefish
Match: ENSAMXT00000046541.1 (zinc finger CCHC domain-containing protein 9 [Source:NCBI gene;Acc:103032950]) HSP 1 Score: 48.521 bits (114), Expect = 2.271e-6 Identity = 29/99 (29.29%), Postives = 46/99 (46.46%), Query Frame = 1
Query: 349 CYNCHESGHMSRECPKQRSNGPRSNG-CYKCGESGHMARDCNQEGSDNRQERQ-VKCYNCNQNGHMSRECPNGQSEKK-----CYKCNKIGHMSRECNE 624
C+NC + GH +CP+ + G CY+CG + H + C + + KC+ C Q GH+SR CP+ C+ C + H ++C E
Sbjct: 113 CFNCRKPGHGLADCPEADGDEELGRGICYRCGSTEHEIQRCRAKVDPALGDYPYAKCFICGQTGHLSRSCPDNPRGLYAAGGCCHVCGSVEHFQKDCPE 211
BLAST of SMED30016196 vs. Ensembl Cavefish
Match: ENSAMXT00000047897.1 (pep primary_assembly:Astyanax_mexicanus-2.0:15:10959414:10969971:-1 gene:ENSAMXG00000029509.1 transcript:ENSAMXT00000047897.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.9802 bits (110), Expect = 3.267e-6 Identity = 29/83 (34.94%), Postives = 37/83 (44.58%), Query Frame = 1
Query: 394 KQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVK--------CYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
K + P +GCYKCG GH+ R+ N R + K CY C GH+ REC ++ KC C K GH C
Sbjct: 34 KPKPKAPSQSGCYKCGAQGHIGRESNTNHVSGRARSKPKPKAPSQSGCYKCGAQGHIGRECIRSKNH-KCSHCGKRGHFDDLC 115
BLAST of SMED30016196 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003739.1 (pep scaffold:Pmarinus_7.0:GL499243:411:1384:-1 gene:ENSPMAG00000003418.1 transcript:ENSPMAT00000003739.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-18 Identity = 56/140 (40.00%), Postives = 73/140 (52.14%), Query Frame = 1
Query: 220 CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQER--QVKCYNCNQNGHMSRECPN---GQSEKKCYKCNKIGHMSRECNE 624
CF CG SGH +RECP G R G RG CY C E GH++RECP + CY CG+ GH+AR+C + RQ+R CY C + GH++REC + G + KCY C + GHM R+C +
Sbjct: 6 CFRCGGSGHWARECPNG-----AGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLPQDT------CYNCGKGGHIAREC----PEGRQDRGGGPSCYTCGKQGHLARECSSGGGGPGDNKCYGCGQRGHMQRDCTK 130 HSP 2 Score: 74.7146 bits (182), Expect = 3.376e-17 Identity = 51/150 (34.00%), Postives = 67/150 (44.67%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCT----------ESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSREC 552
EC+ CG GH +R+C G R C+ CGE GH++RECP CYNC + GH++RECP+ R + CY CG+ GH+AR+C+ G KCY C Q GHM R+C
Sbjct: 5 ECFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLPQ-----------------------DTCYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLARECSSGGGGPGDN---KCYGCGQRGHMQRDC 128 HSP 3 Score: 69.707 bits (169), Expect = 2.864e-15 Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 346 ECYNCHESGHMSRECP------------KQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEK----KCYKCNKIGHMSRECN 621
EC+ C SGH +RECP R R +GCY+CGE GH+AR+C Q CYNC + GH++RECP G+ ++ CY C K GH++REC+
Sbjct: 5 ECFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLP--------QDTCYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLARECS 104
BLAST of SMED30016196 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010393.1 (pep scaffold:Pmarinus_7.0:GL485791:8073:10868:-1 gene:ENSPMAG00000009411.1 transcript:ENSPMAT00000010393.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 73.559 bits (179), Expect = 4.991e-17 Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 349 CYNCHESGHMSRECP-KQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQ--VKCYNCNQNGHMSRECPN---GQSEKKCYKCNKIGHMSRECNE 624
CY C E GH++RECP Q S + CY CG+ GH+AR+C + RQ+R CY C + GH++REC + G + KCY C + GHM R+C +
Sbjct: 10 CYRCGEGGHIARECPLPQDSVSSNTAACYNCGKGGHIAREC----PEGRQDRGGGPSCYTCGKQGHLARECSSGGGGPGDNKCYGCGQRGHMQRDCTK 103 HSP 2 Score: 73.1738 bits (178), Expect = 6.528e-17 Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQ 474
CY CG+ GH++R+C + S S + AC+NCG+ GH++RECP+ G G CY C + GH++REC GP N CY CG+ GHM RDC +
Sbjct: 10 CYRCGEGGHIARECPLPQDSVS-SNTAACYNCGKGGHIARECPEGRQDRGG-----------------GPSCYTCGKQGHLAREC-SSGGGGPGDNKCYGCGQRGHMQRDCTK 103 HSP 3 Score: 72.4034 bits (176), Expect = 1.537e-16 Identity = 41/112 (36.61%), Postives = 54/112 (48.21%), Query Frame = 1
Query: 217 ACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSREC 552
C+ CGE GH++RECP CYNC + GH++RECP+ R + CY CG+ GH+AR+C+ G KCY C Q GHM R+C
Sbjct: 9 GCYRCGEGGHIARECPLPQDSVSSNT----------------AACYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLARECSSGGGGPGDN---KCYGCGQRGHMQRDC 101 HSP 4 Score: 68.1662 bits (165), Expect = 4.950e-15 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 418 SNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEK----KCYKCNKIGHMSRECN 621
++GCY+CGE GH+AR+C D+ CYNC + GH++RECP G+ ++ CY C K GH++REC+
Sbjct: 7 TDGCYRCGEGGHIARECPLP-QDSVSSNTAACYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLARECS 77 HSP 5 Score: 54.299 bits (129), Expect = 5.542e-10 Identity = 36/95 (37.89%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESKKS-GSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPK 396
+SS CYNCGK GH++R+C E ++ G GP +C+ CG+ GH++REC G GD +CY C + GHM R+C K
Sbjct: 30 VSSNTAACYNCGKGGHIARECPEGRQDRGGGP---SCYTCGKQGHLARECSSGGGGPGD------------------NKCYGCGQRGHMQRDCTK 103
BLAST of SMED30016196 vs. Ensembl Yeast
Match: GIS2 (Translational activator for mRNAs with internal ribosome entry sites; associates with polysomes and binds to a specific subset of mRNAs; localizes to RNA processing bodies (P bodies) and to stress granules; may have a role in translation regulation under stress conditions; ortholog of human ZNF9/CNBP, a gene involved in myotonic dystrophy type 2 [Source:SGD;Acc:S000005199]) HSP 1 Score: 100.908 bits (250), Expect = 5.014e-27 Identity = 69/188 (36.70%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 58 KILFVCIRIGIHIFD*SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSN-GCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
K +VC +IG H+ + S R+ CYNC K GH+ DCT + C+NCGE+GH+ EC C+NC+++GH+SRECP+ + S CYKCG HMA+DC +E + +KCY C Q GHMSR+C Q+++ CY CN+ GH+S++C
Sbjct: 4 KACYVCGKIG-HL---AEDCDSERL-CYNCNKPGHVQTDCTMPRTV----EFKQCYNCGETGHVRSECTVQ-------------------------RCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGIS----GLKCYTCGQAGHMSRDC---QNDRLCYNCNETGHISKDC 150 HSP 2 Score: 79.7221 bits (195), Expect = 5.246e-19 Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNG 561
+CYNCG+ GH+ +CT + CFNC ++GH+SRECP+ + CY C HM+++C K+ +G CY CG++GHM+RDC + CYNCN+ GH+S++CP
Sbjct: 48 QCYNCGETGHVRSECTVQR----------CFNCNQTGHISRECPEPKKTSRFSK----------------VSCYKCGGPNHMAKDCMKE--DGISGLKCYTCGQAGHMSRDCQNDRL---------CYNCNETGHISKDCPKA 153 HSP 3 Score: 58.151 bits (139), Expect = 4.522e-11 Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 349 CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
CY C + GH++ +C +R CY C + GH+ DC R +CYNC + GH+ EC + ++C+ CN+ GH+SREC E
Sbjct: 6 CYVCGKIGHLAEDCDSERL-------CYNCNKPGHVQTDCTMP----RTVEFKQCYNCGETGHVRSEC----TVQRCFNCNQTGHISRECPE 82 HSP 4 Score: 45.4394 bits (106), Expect = 1.283e-6 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 1
Query: 130 MECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQ 267
++CY CG+ GHMSRDC + C+NC E+GH+S++CP+
Sbjct: 116 LKCYTCGQAGHMSRDCQNDR---------LCYNCNETGHISKDCPK 152
BLAST of SMED30016196 vs. Ensembl Nematostella
Match: EDO27708 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T8H9]) HSP 1 Score: 88.1965 bits (217), Expect = 1.001e-19 Identity = 56/149 (37.58%), Postives = 70/149 (46.98%), Query Frame = 1
Query: 220 CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDC----NQEGSDNRQERQVKCYNCNQNGHMSRECPNGQ------------SEKKCYKCNKIGHMSREC 618
C CGESGH +R+CPQ G G C+ C+E GH +RECP S G N C+KC ESGH AR+C G CY CN+ GH +RECPN + S+ C+KC + GH +REC
Sbjct: 36 CRKCGESGHFARDCPQGGGGGSRT-------------------CHKCNEEGHFARECPNADSGG---NKCFKCNESGHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQTGHFAREC 162 HSP 2 Score: 80.8777 bits (198), Expect = 2.813e-17 Identity = 53/153 (34.64%), Postives = 68/153 (44.44%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECP------KQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQV------KCYNCNQNGHMSRECPN 558
C CG+ GH +RDC + G G S C C E GH +RECP + G +C+ C+ESGH +RECP G + CYKC E+GH AR+C S+ C+ C Q GH +RECPN
Sbjct: 36 CRKCGESGHFARDCPQ----GGGGGSRTCHKCNEEGHFARECPN--------------------ADSGGNKCFKCNESGHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQTGHFARECPN 164 HSP 3 Score: 65.0846 bits (157), Expect = 5.336e-12 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPR--------SNGCYKCGESGHMARDCNQEGS 483
C+ C ++GH +R+C + G+ CF C ESGH +RECP +G GG G G+ CY C+E+GH +RECP SNG + C+KC ++GH AR+C E +
Sbjct: 60 CHKCNEEGHFARECPNADSGGN-----KCFKCNESGHFARECPNSGGGGGGFGG-----------GSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQTGHFARECPNESA 167
BLAST of SMED30016196 vs. Ensembl Nematostella
Match: EDO36176 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJG4]) HSP 1 Score: 67.3958 bits (163), Expect = 3.600e-14 Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPR----SGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEG 480
+C+ CG+ GH SR+C G + GAC CG+ GH SRECP S+ + + + G C+ C + GH SRECP Q G +S+ C+KCGE+GH +R+C G
Sbjct: 21 DCHQCGEAGHFSRECPNKGNQGEPIKRMGGGGACHKCGKEGHFSRECPNQDSQRMNIQYLCQTHFSISG----GRNCHKCGQEGHFSRECPNQAIQG-QSDTCHKCGETGHYSRECPTLG 135 HSP 2 Score: 64.6994 bits (156), Expect = 4.093e-13 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 1
Query: 346 ECYNCHESGHMSRECPKQRSNGPR------SNGCYKCGESGHMARDCNQEGSDNRQERQV-----------KCYNCNQNGHMSRECPN----GQSEKKCYKCNKIGHMSREC 618
+C+ C E+GH SRECP + + G C+KCG+ GH +R+C + S + + C+ C Q GH SRECPN GQS+ C+KC + GH SREC
Sbjct: 21 DCHQCGEAGHFSRECPNKGNQGEPIKRMGGGGACHKCGKEGHFSRECPNQDSQRMNIQYLCQTHFSISGGRNCHKCGQEGHFSRECPNQAIQGQSD-TCHKCGETGHYSREC 131
BLAST of SMED30016196 vs. Ensembl Nematostella
Match: EDO45618 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSD8]) HSP 1 Score: 58.5362 bits (140), Expect = 3.832e-11 Identity = 27/96 (28.12%), Postives = 45/96 (46.88%), Query Frame = 1
Query: 352 YNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKK-----CYKCNKIGHMSRECNE 624
++C E GH + +CP+ + CYKCG + H+ + C + KC+ C + GH+S CP+ C +C + H+ R+C E
Sbjct: 2 FHCRELGHRAADCPQTKKTSAGVGVCYKCGATSHITKHCKVTTTSESPFPFAKCFICGETGHLSSSCPDNPKGLYPEGGGCKECGSVEHLRRDCPE 97 HSP 2 Score: 46.2098 bits (108), Expect = 7.572e-7 Identity = 29/101 (28.71%), Postives = 42/101 (41.58%), Query Frame = 1
Query: 106 SRKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSN 408
++K S+ CY CG H+++ C + S S CF CGE+GH+S CP N + G C C H+ R+CP+ N
Sbjct: 17 TKKTSAGVGVCYKCGATSHITKHCKVTTTSESPFPFAKCFICGETGHLSSSCPDN----------------PKGLYPEGGGCKECGSVEHLRRDCPELERN 101
BLAST of SMED30016196 vs. Ensembl Nematostella
Match: EDO28813 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5E8]) HSP 1 Score: 57.3806 bits (137), Expect = 7.730e-11 Identity = 27/97 (27.84%), Postives = 45/97 (46.39%), Query Frame = 1
Query: 349 CYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKK-----CYKCNKIGHMSRECNE 624
C++C E GH + +CP+ + CYKC + H+ + C + KC+ C + GH+S CP+ C +C + H+ R+C E
Sbjct: 1 CFHCRELGHRAADCPQTKKTSAGVGVCYKCRATSHITKHCKVTTTTESPFPFAKCFICGETGHLSSSCPDNPKGLYPEGGGCKECGSVEHLRRDCPE 97 HSP 2 Score: 53.1434 bits (126), Expect = 2.586e-9 Identity = 34/126 (26.98%), Postives = 58/126 (46.03%), Query Frame = 1
Query: 136 CYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPK-QRSNGPRSNGCYKCGESGHMARDC-----NQEGSDNRQ 495
C++C + GH + DC ++KK+ +G G C+ C + H+++ C + +C+ C E+GH+S CP + P GC +CG H+ RDC N++G+ Q
Sbjct: 1 CFHCRELGHRAADCPQTKKTSAG--VGVCYKCRATSHITKHCKVTTTTESPFPF---------------AKCFICGETGHLSSSCPDNPKGLYPEGGGCKECGSVEHLRRDCPELERNKQGTVGIQ 109
BLAST of SMED30016196 vs. Ensembl Nematostella
Match: EDO34570 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SP17]) HSP 1 Score: 48.9062 bits (115), Expect = 6.049e-8 Identity = 34/135 (25.19%), Postives = 47/135 (34.81%), Query Frame = 1
Query: 220 CFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
CF CG +GH+ CP C CH+ GH CP + C++CG +GH+ C V C C+Q GH CP +C++C GH+ C
Sbjct: 1 CFRCGAAGHVVARCPA-------------------------LACGYCHQVGHPISTCPVR-------GRCFRCGAAGHVVARCPAP--------AVPCGYCHQVGHPISTCP---VRGRCFRCGAAGHVVARCPA 92
BLAST of SMED30016196 vs. Ensembl Medaka
Match: cnbpa (CCHC-type zinc finger nucleic acid binding protein [Source:NCBI gene;Acc:101173222]) HSP 1 Score: 85.1149 bits (209), Expect = 4.667e-20 Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGP------RSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
EC+ CG+ GH + C + + + C+ CG+ GHM+R+C Q CYNCH SGH+SR+C + + R CY CG++GHMARDC+ N Q KCY+C GH+ + C + KCY+C +IGH++ C++
Sbjct: 8 ECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCDQTEDA-----------------------CYNCHRSGHISRDCKEPKKE--REQLCYTCGKAGHMARDCDHA---NEQ----KCYSCGGFGHIQKLC----DKVKCYRCGEIGHVAVHCSK 141 HSP 2 Score: 84.3445 bits (207), Expect = 1.116e-19 Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
+ + CY CG GHM+RDC +++ AC+NC SGH+SR+C + +R CY C ++GHM+R+C + CY CG GH+ + C+ +VKCY C + GH++ C SE CY C K GH+++EC
Sbjct: 39 KELFCYRCGDQGHMARDCDQTED--------ACYNCHRSGHISRDCKE-------------------PKKEREQLCYTCGKAGHMARDC-----DHANEQKCYSCGGFGHIQKLCD----------KVKCYRCGEIGHVAVHCSKA-SETNCYNCGKAGHLAKECT 161 HSP 3 Score: 71.2478 bits (173), Expect = 6.694e-15 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 343 TECYNCHESGHMSRECPKQRSNGP--------RSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSREC--PNGQSEKKCYKCNKIGHMSRECN 621
+EC+ C GH + CP + CY+CG+ GHMARDC+Q + CYNC+++GH+SR+C P + E+ CY C K GHM+R+C+
Sbjct: 7 SECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCDQ--------TEDACYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCD 101 HSP 4 Score: 55.0694 bits (131), Expect = 4.907e-9 Identity = 35/120 (29.17%), Postives = 52/120 (43.33%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
R CY CGK GHM+RDC + + C++CG GH+ + C + +CY C E GH++ C K CY CG++GH+A++C E +
Sbjct: 83 REQLCYTCGKAGHMARDCDHANEQ-------KCYSCGGFGHIQKLCDK-------------------------VKCYRCGEIGHVAVHCSK-----ASETNCYNCGKAGHLAKECTIEAT 165
BLAST of SMED30016196 vs. Ensembl Medaka
Match: cnbpa (CCHC-type zinc finger nucleic acid binding protein [Source:NCBI gene;Acc:101173222]) HSP 1 Score: 75.0998 bits (183), Expect = 1.616e-16 Identity = 52/167 (31.14%), Postives = 77/167 (46.11%), Query Frame = 1
Query: 133 ECYNCGKDGHMSRDCTESKKSGSGPRSG----ACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECN 621
EC+ CG+ GH + C + + R AC+NC SGH+SR+C + +R CY C ++GHM+R+C + CY CG GH+ + C+ +VKCY C + GH++ C SE CY C K GH+++EC
Sbjct: 8 ECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKACYNCHRSGHISRDCKE-------------------PKKEREQLCYTCGKAGHMARDC-----DHANEQKCYSCGGFGHIQKLCD----------KVKCYRCGEIGHVAVHCSKA-SETNCYNCGKAGHLAKECT 139 HSP 2 Score: 62.7734 bits (151), Expect = 5.212e-12 Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 343 TECYNCHESGHMSRECPKQRSNGPRS------NGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
+EC+ C GH + CP R CY C SGH++RDC + ++ER+ CY C + GHM+R+C + +E+KCY C GH+ + C++
Sbjct: 7 SECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKACYNCHRSGHISRDCKEP----KKEREQLCYTCGKAGHMARDCDHA-NEQKCYSCGGFGHIQKLCDK 101 HSP 3 Score: 55.4546 bits (132), Expect = 2.866e-9 Identity = 35/120 (29.17%), Postives = 52/120 (43.33%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGS 483
R CY CGK GHM+RDC + + C++CG GH+ + C + +CY C E GH++ C K CY CG++GH+A++C E +
Sbjct: 61 REQLCYTCGKAGHMARDCDHANEQ-------KCYSCGGFGHIQKLCDK-------------------------VKCYRCGEIGHVAVHCSK-----ASETNCYNCGKAGHLAKECTIEAT 143
BLAST of SMED30016196 vs. Ensembl Medaka
Match: zcchc9 (zinc finger CCHC-type containing 9 [Source:NCBI gene;Acc:101166685]) HSP 1 Score: 50.447 bits (119), Expect = 4.956e-7 Identity = 31/114 (27.19%), Postives = 49/114 (42.98%), Query Frame = 1
Query: 349 CYNCHESGHMSRECPKQRSNGPRSNG-CYKCGESGHMARDCNQEGSDNRQERQ-VKCYNCNQNGHMSRECPNGQSEK-----KCYKCNKIGHMSRECNE*SYLGDKAFFVYMSN 669
C+NC + GH +CP+ ++ G CY+CG + H C + + KC+ C Q GH+SR CP+ C C + H ++C E ++SN
Sbjct: 120 CFNCRKPGHGLADCPEADADREMGRGICYRCGSTEHEIHKCRAKVDPALGDYPYAKCFICGQTGHLSRSCPDNPKGLYAEGGSCRLCGSVEHFQKDCPEHQAATHSVTLAWLSN 233
BLAST of SMED30016196 vs. Planmine SMEST
Match: SMESG000059283.1 (SMESG000059283.1) HSP 1 Score: 286.189 bits (731), Expect = 1.651e-98 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
Query: 115 MSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
MSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNGSRGGDRRGGYERRGDDRRGNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE
Sbjct: 1 MSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNGSRGGDRRGGYERRGDDRRGNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 170 HSP 2 Score: 89.7373 bits (221), Expect = 9.326e-22 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 109 RKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQ 474
R+ + R ECYNC + GHMSR+C K+ +GPRS C+ CGESGHM+R+C Q GS +R +CYNC+++GHMSRECP NG CYKC + GHM+R+CN+
Sbjct: 70 RRGNQRGTECYNCHESGHMSRECP--KQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQ---------------ERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 170
BLAST of SMED30016196 vs. Planmine SMEST
Match: SMESG000059283.1 (SMESG000059283.1) HSP 1 Score: 276.174 bits (705), Expect = 1.167e-94 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
Query: 130 MECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
MECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNGSRGGDRRGGYERRGDDRRGNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE
Sbjct: 1 MECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNGSRGGDRRGGYERRGDDRRGNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 165 HSP 2 Score: 89.3521 bits (220), Expect = 9.452e-22 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 109 RKMSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQ 474
R+ + R ECYNC + GHMSR+C K+ +GPRS C+ CGESGHM+R+C Q GS +R +CYNC+++GHMSRECP NG CYKC + GHM+R+CN+
Sbjct: 65 RRGNQRGTECYNCHESGHMSRECP--KQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQ---------------ERQVKCYNCNQNGHMSRECP----NGQSEKKCYKCNKIGHMSRECNE 165
BLAST of SMED30016196 vs. Planmine SMEST
Match: SMESG000059266.1 (SMESG000059266.1) HSP 1 Score: 174.866 bits (442), Expect = 1.522e-54 Identity = 102/191 (53.40%), Postives = 127/191 (66.49%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQ--RSNGPRSNGCYKCGESGHMARDCNQEGSDNRQ----------------------ERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
R+++CYNCGKDGHM+RDCTE KKSGS R+ ACFNCG +GH+S+ECP N GG+RRGG CYNC E+GH+S++C Q R N PR N CYKCGE+GH++R+C Q S +RQ +RQ+KCYNC+QNGHMSRECPNG SEKKCYKCN GH++R+C +
Sbjct: 6 RKLDCYNCGKDGHMARDCTEYKKSGSNQRTNACFNCGLNGHISKECPDNRRGGGNRRGGRSS-----------VTCYNCGEAGHVSKDCSDQGYRDNAPRGNTCYKCGEAGHISRNCTQNWSGDRQMKCYKCNQLGHMSRDCNEDGGNDRQIKCYNCHQNGHMSRECPNGPSEKKCYKCNNPGHLARDCTD 185 HSP 2 Score: 93.9745 bits (232), Expect = 2.759e-23 Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 130 MECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXX-------XXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE 477
+ CYNCG+ GH+S+DC++ + PR C+ CGE+GH+SR C QN S + G R ++ GN R +CYNCH++GHMSRECP NGP CYKC GH+ARDC +
Sbjct: 68 VTCYNCGEAGHVSKDCSDQGYRDNAPRGNTCYKCGEAGHISRNCTQNWSGDRQMKCYKCNQLGHMSRDCNEDGGNDRQIKCYNCHQNGHMSRECP----NGPSEKKCYKCNNPGHLARDCTDD 186 HSP 3 Score: 61.2326 bits (147), Expect = 3.269e-11 Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 1
Query: 415 RSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN----------GQSEKKCYKCNKIGHMSRECNE*SY 633
R CY CG+ GHMARDC + +R C+NC NGH+S+ECP+ G+S CY C + GH+S++C++ Y
Sbjct: 6 RKLDCYNCGKDGHMARDCTEYKKSGSNQRTNACFNCGLNGHISKECPDNRRGGGNRRGGRSSVTCYNCGEAGHVSKDCSDQGY 88
BLAST of SMED30016196 vs. Planmine SMEST
Match: SMESG000059254.1 (SMESG000059254.1) HSP 1 Score: 174.866 bits (442), Expect = 1.522e-54 Identity = 102/191 (53.40%), Postives = 127/191 (66.49%), Query Frame = 1
Query: 124 RRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQ--RSNGPRSNGCYKCGESGHMARDCNQEGSDNRQ----------------------ERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSRECNE 624
R+++CYNCGKDGHM+RDCTE KKSGS R+ ACFNCG +GH+S+ECP N GG+RRGG CYNC E+GH+S++C Q R N PR N CYKCGE+GH++R+C Q S +RQ +RQ+KCYNC+QNGHMSRECPNG SEKKCYKCN GH++R+C +
Sbjct: 6 RKLDCYNCGKDGHMARDCTEYKKSGSNQRTNACFNCGLNGHISKECPDNRRGGGNRRGGRSS-----------VTCYNCGEAGHVSKDCSDQGYRDNAPRGNTCYKCGEAGHISRNCTQNWSGDRQMKCYKCNQLGHMSRDCNEDGGNDRQIKCYNCHQNGHMSRECPNGPSEKKCYKCNNPGHLARDCTD 185 HSP 2 Score: 93.9745 bits (232), Expect = 2.759e-23 Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 130 MECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXX-------XXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQE 477
+ CYNCG+ GH+S+DC++ + PR C+ CGE+GH+SR C QN S + G R ++ GN R +CYNCH++GHMSRECP NGP CYKC GH+ARDC +
Sbjct: 68 VTCYNCGEAGHVSKDCSDQGYRDNAPRGNTCYKCGEAGHISRNCTQNWSGDRQMKCYKCNQLGHMSRDCNEDGGNDRQIKCYNCHQNGHMSRECP----NGPSEKKCYKCNNPGHLARDCTDD 186 HSP 3 Score: 61.2326 bits (147), Expect = 3.269e-11 Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 1
Query: 415 RSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPN----------GQSEKKCYKCNKIGHMSRECNE*SY 633
R CY CG+ GHMARDC + +R C+NC NGH+S+ECP+ G+S CY C + GH+S++C++ Y
Sbjct: 6 RKLDCYNCGKDGHMARDCTEYKKSGSNQRTNACFNCGLNGHISKECPDNRRGGGNRRGGRSSVTCYNCGEAGHVSKDCSDQGY 88
BLAST of SMED30016196 vs. Planmine SMEST
Match: SMESG000008610.1 (SMESG000008610.1) HSP 1 Score: 96.2857 bits (238), Expect = 3.773e-24 Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 1
Query: 127 RMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPQNXXXXXXXXXXXXXXXXXXXXNQRGTECYNCHESGHMSRECPKQRSNGPRSNGCYKCGESGHMARDCNQEGSDNRQERQVKCYNCNQNGHMSRECPNGQSEKKCYKCNKIGHMSREC 618
R CY CG++GH+++DC GSG C+NCG + H+ ++CP+ CY C+ GH++R C S CYKC + GH+ARDCN + R CY CN+ GH +R+CPN C+ C ++GHM+REC
Sbjct: 57 RKSCYQCGREGHIAKDC------GSGDNQNGCYNCGGTDHLQKDCPEVIV----------------------KTCYRCNCKGHLARNCT---STIEDDRSCYKCNKKGHLARDCNNSYGNGSSNRHFVCYKCNEPGHYARDCPN--DSIICHNCQEVGHMAREC 187 The following BLAST results are available for this feature:
BLAST of SMED30016196 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30016196 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SMED30016196 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of SMED30016196 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30016196 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of SMED30016196 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30016196 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30016196 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30016196 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of SMED30016196 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of SMED30016196 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of SMED30016196 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SMED30016196 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of SMED30016196 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016196 ID=SMED30016196|Name=SMED30016196|organism=Schmidtea mediterranea sexual|type=transcript|length=822bpback to top protein sequence of SMED30016196-orf-1 >SMED30016196-orf-1 ID=SMED30016196-orf-1|Name=SMED30016196-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=171bp MSSRRMECYNCGKDGHMSRDCTESKKSGSGPRSGACFNCGESGHMSRECPback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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