SMED30016186
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016186 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 15
Alignments
SMED30016186 aligns in the following genomic locations:
Homology
BLAST of SMED30016186 vs. Planmine SMEST
Match: SMESG000033673.1 (SMESG000033673.1) HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0 Identity = 368/371 (99.19%), Postives = 370/371 (99.73%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKC+NNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGN TKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVN+KTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK Sbjct: 517 EKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 887 HSP 2 Score: 666.381 bits (1718), Expect = 0.000e+0 Identity = 343/371 (92.45%), Postives = 352/371 (94.88%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRC+KPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKK AIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGN TKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEG KCVLKVVN+KTVNCKN CPLPKE+++RCI+G Q VM++TF VGN C RV + KCQ C K SYK Sbjct: 889 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKLAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGNKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVGNKCNALFVRVNITKCQRCQKTSYK 1259 HSP 3 Score: 652.899 bits (1683), Expect = 0.000e+0 Identity = 337/357 (94.40%), Postives = 346/357 (96.92%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARV 1072 EKC+NNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVN+KTVNCKN CPLPKE+++RCI+G Q VM++TF VG C S R+ Sbjct: 1599 EKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVG--CPRSVYRI 1953 HSP 4 Score: 614.379 bits (1583), Expect = 0.000e+0 Identity = 325/371 (87.60%), Postives = 330/371 (88.95%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKC+NNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRC+KPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQ N I+ LS RCTGNTTKNINVVVGKQCQ+GYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVN+KTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARV LVKCQGCPKPSYK Sbjct: 1261 EKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQDSFN----------------------------------ILLILSGRCTGNTTKNINVVVGKQCQSGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVRLVKCQGCPKPSYK 1597 HSP 5 Score: 369.777 bits (948), Expect = 1.939e-115 Identity = 181/371 (48.79%), Postives = 261/371 (70.35%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKCD K T L+R Y++TN +CV+ + V KL C+C N N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V SK V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y++EKCD K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI K A+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 703 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYKVEKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKLAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 1073 HSP 6 Score: 354.755 bits (909), Expect = 3.427e-110 Identity = 174/363 (47.93%), Postives = 255/363 (70.25%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQ 1090 EKCD K T L+R Y++TN +CV+ + V KL C+C N N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E N+C+ K+V SK V CK CP PKE+R+RCI Q + ++TF VG+KC +R+++ CQ CQ ++Y++EKC+ K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQ Sbjct: 1075 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGNKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVGNKCNALFVRVNITKCQRCQKTSYKVEKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQ 1437 HSP 7 Score: 342.043 bits (876), Expect = 7.597e-106 Identity = 171/376 (45.48%), Postives = 255/376 (67.82%), Query Frame = 2 Query: 23 KNTSLIRVAYRQTNSSCVRTQTTVTKLPCQ------------CYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 K ++ RV +++ C + ++ +PCQ C NT N+ V G+QCQ+G+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V SK V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y++EKC+ K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 1408 KKQAIFRVTFKEVGDKCRFSVIRLSVVPCQDSFNILLILSGRCTGNTTKNINVVVGKQCQSGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVRLVKCQGCPKPSYKVEKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 1783 HSP 8 Score: 300.827 bits (769), Expect = 1.638e-91 Identity = 159/370 (42.97%), Postives = 235/370 (63.51%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGK-KCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPS 1108 EKCD K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V SK V CK CP PKE+R+RCI Q + ++TF VG C S YRI++C+K AKET L+RTF+Q N C++KE+ +K L C+C N T+NI V++G CQNGY +RVLEL E+N C+K FKLR I+C+ C+R +V C NKRL++ +K +K C K++++ VNC + CP P+ K + CI G++ ++R++++ G C ++ +KCQ C + S Sbjct: 1785 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVG-----------------CPRSVYRIDRCEKNAKETFLIRTFFQSANGVCLRKELKLKTLPCKCYDNVTRNITVIIGPSCQNGYKSRVLELRVEKNQNCIKETFKLRSIKCEGACNR-TNQIVGPCFLNKRLVKVLKQIKSNNGSCHWKLLSSTFVNCSHKCPEPQIKTTACINGERFMVRISYQETGGKCEKREQKLQTLKCQTCFRKS 2136 HSP 9 Score: 228.024 bits (580), Expect = 2.802e-66 Identity = 138/414 (33.33%), Postives = 215/414 (51.93%), Query Frame = 2 Query: 26 NTSLIRVA-YRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCP------------------------------------------------DPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQ--GCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 N S I + + N C + K C C + E+ + V +G++C+NG+ R++ KCS+ L ++C C+ V C + +R+ T+ V N+C KIV + C +CP PK S CI K+ + +++++ VG KC+ R+ C C +Y++EKC+ K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 289 NYSFILFHNFSRVNDLCRTETVNLKKYSCGCSKPEESVLKVVYGKECENGYKKRMLLYYEFSQFKCSETYLNLEPVKCDTLCNGTTLV-TSPCVNGKRNNTIYTKVFTNNKCSLKIVKTTESFCDTICPKSLIIESKECVNNIKDVFHITFQNVNGKCIKQTKKIKSNNCTKIQECPQPKFISSDCIEGKKILMKLSYRLVGGKCQEINERIGNENCSIAKCPKPSYKVEKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 701 HSP 10 Score: 186.422 bits (472), Expect = 5.880e-52 Identity = 108/324 (33.33%), Postives = 181/324 (55.86%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKN-RCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGC-QNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCP 967 ++C+ N K T LIR ++ N C+R + + LPC+CY N N+TV G CQNG+ SRV+EL VEK+ C K FKLRSI+C+ C+R ++ VG C N+R + VL+ ++ N C WK+++S FV C CP+P+ K + CI ++ + R++++E G KC +L + CQ C + S Y + +C K +K ++LVRT +++ C +K + + C C G +NV C NG + L N KC + ++ +C S ++ CV+ R++++ + G +C+ K+V ++ + C+++CP Sbjct: 1954 DRCEKNAKETFLIRTFFQSANGVCLRKELKLKTLPCKCYDNVTRNITVIIGPSCQNGYKSRVLELRVEKNQNCIKETFKLRSIKCEGACNRTNQI-VGPCFLNKRLVKVLKQIKSNNGSCHWKLLSSTFVNCSHKCPEPQIKTTACINGERFMVRISYQETGGKCEKREQKLQTLKCQTCFRKSVYELMECSKTSKTSELVRT----SHRNCTRKVEKLLDVDCLCEGLNNYGLNVTSTANCTNGVRVKTLSFYTTVNGKCQVKSLSIKGGKCGCLGS---TFNLSVCVNGNRILEKFTRYQSGSQCLSKLVFSRKIRCRSICP 2269 HSP 11 Score: 85.8853 bits (211), Expect = 7.722e-18 Identity = 76/244 (31.15%), Postives = 105/244 (43.03%), Query Frame = 2 Query: 404 CPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQG---CQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCP--LPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARV---GLVKCQGCPKPSY 1111 C P K+ C+ K+Q TF KC S R V C G C + Y+ C L F N C + V +KK SC C+ + VV GK+C+NGY R+L E KC + L ++C C+ LV + CV+ KR V KC LK+V T C +CP L E K C+ + V +TF+NV C+ T ++ K Q CP+P + Sbjct: 229 CSAPIVKKGPCVNKEQINVITTFYYYNGKC-VSENRKLTVKCLGPKDCPDPYYQKTSCGSANYSFILFHNF-SRVNDLCRTETVNLKKYSCGCSKPEESVLKVVYGKECENGYKKRMLLYYEFSQFKCSETYLNLEPVKCDTLCN-GTTLVTSPCVNGKRNNTIYTKVFTNNKCSLKIVKTTESFCDTICPKSLIIESKE-CVNNIKDVFHITFQNVNGKCIKQTKKIKSNNCTKIQECPQPKF 468
BLAST of SMED30016186 vs. Planmine SMEST
Match: SMESG000033673.1 (SMESG000033673.1) HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0 Identity = 368/371 (99.19%), Postives = 370/371 (99.73%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKC+NNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGN TKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVN+KTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK Sbjct: 517 EKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 887 HSP 2 Score: 714.531 bits (1843), Expect = 0.000e+0 Identity = 366/371 (98.65%), Postives = 370/371 (99.73%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKC+NNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRC+KPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQ+GYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVN+KTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARV LVKCQGCPKPSYK Sbjct: 1261 EKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQSGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVRLVKCQGCPKPSYK 1631 HSP 3 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 344/371 (92.72%), Postives = 355/371 (95.69%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKC+NNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVN+KTVNCKN CPLPKE+++RCI+G Q VM++TF VGN C RV + KCQ CP+ Y+ Sbjct: 1633 EKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVGNKCNALFVRVNITKCQRCPRSVYR 2003 HSP 4 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 343/371 (92.45%), Postives = 352/371 (94.88%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRC+KPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKK AIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGN TKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEG KCVLKVVN+KTVNCKN CPLPKE+++RCI+G Q VM++TF VGN C RV + KCQ C K SYK Sbjct: 889 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKLAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGNKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVGNKCNALFVRVNITKCQRCQKTSYK 1259 HSP 5 Score: 369.007 bits (946), Expect = 2.944e-115 Identity = 181/371 (48.79%), Postives = 261/371 (70.35%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKCD K T L+R Y++TN +CV+ + V KL C+C N N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V SK V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y++EKCD K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI K A+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 703 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYKVEKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKLAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 1073 HSP 6 Score: 369.007 bits (946), Expect = 3.211e-115 Identity = 181/371 (48.79%), Postives = 263/371 (70.89%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKCD K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQ+G+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V SK V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y++EKC+ K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 1447 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQSGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVRLVKCQGCPKPSYKVEKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 1817 HSP 7 Score: 362.459 bits (929), Expect = 7.112e-113 Identity = 177/371 (47.71%), Postives = 260/371 (70.08%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 EKCD K T L+R Y++TN +CV+ + V KL C+C N N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E N+C+ K+V SK V CK CP PKE+R+RCI Q + ++TF VG+KC +R+++ CQ CQ ++Y++EKC+ K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 1075 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNITKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGNKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVGNKCNALFVRVNITKCQRCQKTSYKVEKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCRKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 1445 HSP 8 Score: 321.242 bits (822), Expect = 1.179e-98 Identity = 164/370 (44.32%), Postives = 245/370 (66.22%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGK-KCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPS 1108 EKCD K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V SK V CK CP PKE+R+RCI Q + ++TF VG+KC +R+++ CQ C S YRI++C+K AKET L+RTF+Q N C++KE+ +K L C+C N T+NI V++G CQNGY +RVLEL E+N C+K FKLR I+C+ C+R +V C NKRL++ +K +K C K++++ VNC + CP P+ K + CI G++ ++R++++ G C ++ +KCQ C + S Sbjct: 1819 EKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNSKTVNCKNPCPLPKERRTRCIKGIQGVMKITFNLVGNKCNALFVRVNITKCQRCPRSVYRIDRCEKNAKETFLIRTFFQSANGVCLRKELKLKTLPCKCYDNVTRNITVIIGPSCQNGYKSRVLELRVEKNQNCIKETFKLRSIKCEGACNR-TNQIVGPCFLNKRLVKVLKQIKSNNGSCHWKLLSSTFVNCSHKCPEPQIKTTACINGERFMVRISYQETGGKCEKREQKLQTLKCQTCFRKS 2187 HSP 9 Score: 227.639 bits (579), Expect = 4.243e-66 Identity = 138/414 (33.33%), Postives = 215/414 (51.93%), Query Frame = 2 Query: 26 NTSLIRVA-YRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCP------------------------------------------------DPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQ--GCQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCPLPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARVGLVKCQGCPKPSYK 1114 N S I + + N C + K C C + E+ + V +G++C+NG+ R++ KCS+ L ++C C+ V C + +R+ T+ V N+C KIV + C +CP PK S CI K+ + +++++ VG KC+ R+ C C +Y++EKC+ K T L+R Y++TN +CV+ + V KL C+C NT N+ V G+QCQNG+++RV+EL E++ KC KVAFKLR IRC++PC R+ K+ V KC SN+R + +++V+E +C+ K+V +K V CK +CP PKEK+SRCI KQA+ R+TF+ VG+ C +S R+ +V CQGC +Y+ Sbjct: 289 NYSFILFHNFSRVNDLCRTETVNLKKYSCGCSKPEESVLKVVYGKECENGYKKRMLLYYEFSQFKCSETYLNLEPVKCDTLCNGTTLV-TSPCVNGKRNNTIYTKVFTNNKCSLKIVKTTESFCDTICPKSLIIESKECVNNIKDVFHITFQNVNGKCIKQTKKIKSNNCTKIQECPQPKFISSDCIEGKKILMKLSYRLVGGKCQEINERIGNENCSIAKCPKPSYKVEKCNNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKNRCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGCQNSTYR 701 HSP 10 Score: 186.037 bits (471), Expect = 7.927e-52 Identity = 108/324 (33.33%), Postives = 181/324 (55.86%), Query Frame = 2 Query: 2 EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFGRQCQNGFLSRVIELNVEKSGKCSKVAFKLRSIRCKKPCDRRRKVEVGKCKSNQRSLTVLRAVREKN-RCMWKIVTSKFVKCKKVCPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQGC-QNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCP 967 ++C+ N K T LIR ++ N C+R + + LPC+CY N N+TV G CQNG+ SRV+EL VEK+ C K FKLRSI+C+ C+R ++ VG C N+R + VL+ ++ N C WK+++S FV C CP+P+ K + CI ++ + R++++E G KC +L + CQ C + S Y + +C K +K ++LVRT +++ C +K + + C C G +NV C NG + L N KC + ++ +C S ++ CV+ R++++ + G +C+ K+V ++ + C+++CP Sbjct: 2005 DRCEKNAKETFLIRTFFQSANGVCLRKELKLKTLPCKCYDNVTRNITVIIGPSCQNGYKSRVLELRVEKNQNCIKETFKLRSIKCEGACNRTNQI-VGPCFLNKRLVKVLKQIKSNNGSCHWKLLSSTFVNCSHKCPEPQIKTTACINGERFMVRISYQETGGKCEKREQKLQTLKCQTCFRKSVYELMECSKTSKTSELVRT----SHRNCTRKVEKLLDVDCLCEGLNNYGLNVTSTANCTNGVRVKTLSFYTTVNGKCQVKSLSIKGGKCGCLGS---TFNLSVCVNGNRILEKFTRYQSGSQCLSKLVFSRKIRCRSICP 2320 HSP 11 Score: 85.5001 bits (210), Expect = 9.720e-18 Identity = 76/244 (31.15%), Postives = 105/244 (43.03%), Query Frame = 2 Query: 404 CPDPKEKRSRCILKKQAIFRVTFKEVGDKCRFSVIRLSVVPCQG---CQNSTYRIEKCDKGAKETKLVRTFYQETNQTCVKKEVIVKKLSCRCTGNTTKNINVVVGKQCQNGYITRVLELTEERNDKCVKVAFKLRRIRCQRPCSRKLKLVVNKCVSNKRLIQRMKSVKEGKKCVLKVVNTKTVNCKNLCP--LPKEKKSRCIRGKQAVMRLTFRNVGNVCLYSTARV---GLVKCQGCPKPSY 1111 C P K+ C+ K+Q TF KC S R V C G C + Y+ C L F N C + V +KK SC C+ + VV GK+C+NGY R+L E KC + L ++C C+ LV + CV+ KR V KC LK+V T C +CP L E K C+ + V +TF+NV C+ T ++ K Q CP+P + Sbjct: 229 CSAPIVKKGPCVNKEQINVITTFYYYNGKC-VSENRKLTVKCLGPKDCPDPYYQKTSCGSANYSFILFHNF-SRVNDLCRTETVNLKKYSCGCSKPEESVLKVVYGKECENGYKKRMLLYYEFSQFKCSETYLNLEPVKCDTLCN-GTTLVTSPCVNGKRNNTIYTKVFTNNKCSLKIVKTTESFCDTICPKSLIIESKE-CVNNIKDVFHITFQNVNGKCIKQTKKIKSNNCTKIQECPQPKF 468 The following BLAST results are available for this feature:
BLAST of SMED30016186 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30016186 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30016186 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30016186 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30016186 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016186 ID=SMED30016186|Name=SMED30016186|organism=Schmidtea mediterranea sexual|type=transcript|length=1116bpback to top protein sequence of SMED30016186-orf-1 >SMED30016186-orf-1 ID=SMED30016186-orf-1|Name=SMED30016186-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=371bp EKCDNNQKNTSLIRVAYRQTNSSCVRTQTTVTKLPCQCYRNTETNVTVTFback to top Annotated Terms
The following terms have been associated with this transcript:
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