Translocated promoter region b, nuclear basket protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016090 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Human
Match: TPR (translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]) HSP 1 Score: 170.244 bits (430), Expect = 2.144e-41 Identity = 345/1422 (24.26%), Postives = 656/1422 (46.13%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMK---LEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKID------KLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL---AKKSEENVSLASQ--------LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSEN----------RASSSANLTITESCTVGVIQTAPEKIEKTG-----------DLESQL----EDLSVLNYSLKKQ---IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAI---LQRENDWN----EVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI--LIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS----------------SLITQLRDIGRKYKTESESLSSEIVKI 4354
R +EL Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ LE E Q E+ +I R + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y++ ++ +++ R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + ++++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+S ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE A E++ QL+K+ ++H +Q + + + D+ +L S GV P A L V + T+ + V ES E I+ +LQ + + EK + + +++L + +++++ N + ++ F ++ L+ N+ + E+ L E NQKL +K E+ ++ +Q L ++R + E + ++ + + E L +E+ + L+++ L +IQ L + + E L S+I++L E+ K K ++ +E + + K QL++E + + T+ + + +Q A + ++TG DL SQL E ++ L LK +E Y ++ + E L Q+ EE+ + R+ E + + ++E+ L + ++L+ + +S+E Q++EL++ L N S + E Q D + Q ++ A Y++EL+ HA + +AL +Q+S++ + ++L E Q + +S L + W +R L++E S+ + E L NRL L+DQ+ L + S + + L E E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ ++ME+N LR +++R+++ L + K+ KL I PL+ AEL K+ ++ K + LE + W+ R +L+ + K + EE++++ EK+ +I L EE + LK +I SL + +N ++SLKE D N+ T+K + ITQ++ IGR+YKT+ E L ++ K+
Sbjct: 133 RLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNE-------ILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVE---QSKDQMEKEMLEKIGRLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKQSSVLERDNRRMEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS-------------------------------------SSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLESALTELE----------QLRKS---RQHQMQLVDSIVRQRDMYRILLSQTTGVAIP-LHASSLDDVSLASTPKRPSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLH----ERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTN-------LQTIQGILERSETETKQ----RLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQ-------KAESQLLECKASWEERERMLKDEVSKCVCRCEDLEKQNRL--LHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEK---KLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEE---------IGRLKAEIARSNASLTNNQNLIQSLKE--DLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKV 1455
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Human
Match: TPR (translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]) HSP 1 Score: 117.087 bits (292), Expect = 1.326e-25 Identity = 145/561 (25.85%), Postives = 275/561 (49.02%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMK---LEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHL 1996
R +EL Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ LE E +++ E +I R + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y++ ++ +++ R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + ++++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+ SS ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE A E++ QL+K+ ++H +Q + + + D+ +L S GV P ++ L
Sbjct: 133 RLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNE-------ILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEMLE---KIGRLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKQSSVLERDNRRMEIQVKDLSQQIRVLLMELEEARGNHVIRDEEV-------------------------------------SSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLESALTELE----------QLRKS---RQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLHASSL 633
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Fly
Match: Mtor (gene:FBgn0013756 transcript:FBtr0088033) HSP 1 Score: 62.7734 bits (151), Expect = 4.859e-9 Identity = 88/332 (26.51%), Postives = 165/332 (49.70%), Query Frame = 2
Query: 3605 VIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEE------------KSRVNSE----------LLEELKTQIEEYE------------------RSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYK------------TESESLSSEIVKITDEKENKCKELQALKKEIVEIKQLLDESKK 4444
+I++LR+EK+ + + + RL +++ Q++ +D+LN L +ER + + +H E++ ++E+ + +SN LR +R + +AE T+++ + + + PL+ K ++IE + ++ SL E WR+R + L+EKS + NPEEFK++ E++ L + E+E K R+N+E L E K Q++E+ R L+ +E L++ +E+ K++ K + + QLR + ++YK TES ++E+ K+ E E +L+ALK E +I + DE KK
Sbjct: 1207 IIKFLRKEKDLFAAKLDILKAENARLISEHAIQQKKVDELNGYLNQERAKSQTDVVSANKHEEVLRKIETLNAITDSNRILREERNALTLRVAELTDRISSVEKELFPLQCSNKELTSKIEEINVENTSLRTEAIKWRQRANALVEKSNR-NPEEFKRLQAEREHLAKLLTAEKELNKKQSDELTVLKQRMNTEIPMLNKQMQILDEARKKQVDEFTNLKQNNTRQTQDIMELKNRLLQKEEELLKANEELETKDKTIADKETKEL-QLRKLAKRYKDFYIGLQSQGGGTES---AAELEKVRSELEEVNNQLRALKDEHEKITKECDEVKK 1533
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Fly
Match: Mtor (gene:FBgn0013756 transcript:FBtr0332464) HSP 1 Score: 62.7734 bits (151), Expect = 4.859e-9 Identity = 88/332 (26.51%), Postives = 165/332 (49.70%), Query Frame = 2
Query: 3605 VIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEE------------KSRVNSE----------LLEELKTQIEEYE------------------RSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYK------------TESESLSSEIVKITDEKENKCKELQALKKEIVEIKQLLDESKK 4444
+I++LR+EK+ + + + RL +++ Q++ +D+LN L +ER + + +H E++ ++E+ + +SN LR +R + +AE T+++ + + + PL+ K ++IE + ++ SL E WR+R + L+EKS + NPEEFK++ E++ L + E+E K R+N+E L E K Q++E+ R L+ +E L++ +E+ K++ K + + QLR + ++YK TES ++E+ K+ E E +L+ALK E +I + DE KK
Sbjct: 1207 IIKFLRKEKDLFAAKLDILKAENARLISEHAIQQKKVDELNGYLNQERAKSQTDVVSANKHEEVLRKIETLNAITDSNRILREERNALTLRVAELTDRISSVEKELFPLQCSNKELTSKIEEINVENTSLRTEAIKWRQRANALVEKSNR-NPEEFKRLQAEREHLAKLLTAEKELNKKQSDELTVLKQRMNTEIPMLNKQMQILDEARKKQVDEFTNLKQNNTRQTQDIMELKNRLLQKEEELLKANEELETKDKTIADKETKEL-QLRKLAKRYKDFYIGLQSQGGGTES---AAELEKVRSELEEVNNQLRALKDEHEKITKECDEVKK 1533
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Zebrafish
Match: tprb (translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]) HSP 1 Score: 131.724 bits (330), Expect = 8.206e-30 Identity = 177/691 (25.62%), Postives = 330/691 (47.76%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMND-------LEFRRKDFEQMEQMSLLRSK--KLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS----LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSA--HLL-------SPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIMREKHSSSIKE-LNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKS 2353
RR +E+ + +++ L L E ++++ +L + + ++++ K EQ + LL+S+ L+TE+K E+L ++ NE + + L+ K +EI + + LK ++ E +R A E Q ++ ELN + ++ L K + E K E A+ EL + LKE E ++++ S ++++EL+ +I+ ++ EL AN L R + L+E ++ M+P AA +K G +T+IY+ Y++ + +++ RL++Y+ I++E+E KAP+LK+Q+EE+ ++ SVS+L K + +++++ Q E +ES+++ L R +R E +D+++QV L+ E+E RG V+R D+ G++ SS ++VI+ HLVTF+++ ELQQQN RL+ RDLS+++E E + ++ K LE+ +E++ +KEK Q+ Q TV Q+ D+ +L + GV P G+ L+ SP T T L + + + E++ + +LQ + EK I EK E L ++E++ N + ++ F ++ L+ N+ + DI+ LN+KL K++
Sbjct: 133 RRSQEMEHQSEDLKRLNDRLVEVSAEKMQLQLKLEESETSEVSIKYKEKRMEQ--EKDLLQSQVTWLNTELKAKSEELLSLSRQRGNE-------ILELQCNLNNKEDEITRLQDQVTSLKASNETFQKQAEEMIIKMREAKEQQAALEEKFSNELNANIKLSNLYKGAAADAEAKSEELSRAVDELHKLLKEAGEAHKDLEVKMADLESHKNKEIAELKEKISSQEKELDNANDLLSDSRHRGAASILTEEQVTIMSPTAAAVAKMIKPGMKLTEIYTAYVETQEHLQREKLENKRLHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKESDESNKRASVLERDNQRFEVQLADMAQQVRVLLVELEEARGNHVMREDD-------------------------------DVGSADVSST-----SEVISQHLVTFRSVEELQQQNQRLLVALRDLSEEKEKDELEGDTMKRSEVEKYLEELQRELEQLKEKRTQDLQKVDTVARQR-------------DMFRMLLTQTTGVTFPQGAGAEELMLTSTPRRSPA--VTPTTGTPTALVATAIESTESVEAKAALKQLQEVFVAYKKEK-IESEKAQIEQNEKLQDQVTELRSENMKISTQLEFTSKRYEMLQDNV-------EGYRKDIASLNEKLQKQA 755
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Zebrafish
Match: tpra (translocated promoter region a, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-081104-2]) HSP 1 Score: 118.242 bits (295), Expect = 1.002e-25 Identity = 317/1341 (23.64%), Postives = 620/1341 (46.23%), Query Frame = 2
Query: 623 NLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNES-------LRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQV-----SELRMEINRKDNELTEAN---ALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLA---KKSEENVSLASQ-LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIE--QANEDQIE-LKSKIKQLTLELKQE------------------KSKYQSSLEMWQAK---FSESNAVIDTLKSQLNSENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQ-------IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREK--------------SLEDQVNELERLLGD-KTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTV-----NSIDFAILQRENDWNE----VIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSEL------LEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKELQ 4390
NLEL R +++ K+ + +L++Q++ L++ N +S L+ A E + +++ R ELN + + L K ++E K A+ EL + LKE +E + E KLS Q V S+LR ++ + EL +N A F++ V +L+E E+ +++P AA +K G + ++Y+ +++ ++ +++ R+N+ + I+ E+E KAP+LK+Q+EE+ ++ S+++L K + + +++ Q E +E++++ L R ++ E+ +D+S QV L+ EVE RG V+R D S ++ E R+ V F++I ELQQQN L+ + RDL +Q+E +N ++ + LE+ KE++ IKE+ K L ++ Q+ + + L G L G+ DG + +P + G + T L + + + +S+ + ++ + + EK + + I+ L +S++ A L +++ F ++ L++N+ + E L+ E NQK++ ++ E+ + +Q L +L E+ + ++ R ++ +E +LN EK S + + L SIQ+ + + + E Q +QI+ L+ +I QL L+QE K K +S + Q + + +L+ QLN+ S++ + V + P+ ++ DL ++L+ + N LK++ +E Y ++ + E + QL E Q + + L+ A+ +N+QLE+ + EK S+E++V EL+R + + +T + L + + +E + D + Q ++ A Y++EL+ HA + +AL KQ + + L E+ Q+ QY++D W+ +++ L+ S+ + + E L + L++Q+ NL + ST +S++ + L E +E +++++R+EKE E E++ R + + E + +L +L ER V +T Q E M MES L ++N L+ ++ R++ L +T K+ KL I+PL+ EL K+ ++ K R LE + + R L+ + K + EE K++ E++ +I + EE ++ +E+ + ++Q++ + SL + +SLK+ + + Q+ ITQ++ IGR+YKT+ E L + K+ E +K + Q
Sbjct: 213 NLEL---RCSLESKKEEVTRLQDQVNTLKKANDSMQKSTEDLMRKLKEAKEQRASMEEKYRNELNANLKLCNLYKGAASDSEAKNTELNRAVEELNKLLKEAMEANKGT----EKKLSEL-QSVREKAESDLREKVRHLEKELENSNTRLADFKRRGVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLENKRVNKVLDEIVLEVETKAPILKRQREEYESMQKSMTSLCYKLEQAMKEVHRLQKETDEANKRALVLERDNQKSERQLADMSEQVRVLLVEVEEARGNQVVREDVSSAVSSSSEVQGSRQ---------------------------------------VAFRSIQELQQQNQNLLVKIRDLEEQREKDQNQAKSAKQTELEQSLEKVQKELEQIKEQQNHQKLLAESAIRQRDMYRILLQTAGV----ELPPQGS------DGGSQSTTPSRPGPMATRS-TPLRAAAAESFQATQSKAALKQINDAFTTYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSSQLEFASKRYDMLQENVNGFRRETEALR----ERNQKMSATHQRHEQIIHTMTQDLREANEKLTMSESRAENIRKERDILKQVENRLNQEKESILTEQRSQNLLLTNLKSIQLTMERSETETKQRYNNQIQHLEKEIIQLKKRLEQEVEQRHALERNQDTQLLEAKKKLESQTALHQKTKELLRSAEQQVTSLRQQLNNNENQSAAPKQPVRTLPRVSAP-SVPQ--QEADDLRARLQQVEEQNSDLKERLKNTTTNVEQYRSMVLSLEESVNKEKQLAE--------------QARTSTDNQLKMARELNQQLEARLVEAEKEKLELQQEKMKAVDSVEERVKELKRSMTNMQTELQEALQRSTAAV-TQEQKATQDSKVQAKLAAEAQNKYERELMLHAADVEALQAAKKQGQLLTQNMKQLEEKAQKAASELHQYRTD-------WVMQEKRLKETLSKEQKRAEELQKQNTLLHEQMENLSSKITASTQQETGESSLNIS-LNEEGKSHEQILDILRFVRREKEIAETRLEVAEVETLRYKQRMEYLECELKELQDSLNVEREKLQVTTKTLVQQEETMKRMESMSALTDTNKMLKNEKNRLEHELQQTQAKMRKLEADIKPLQEANGELSEKSGMLQAEK---RLLEEDVKRLKSRTQQLLNQQKDSDQEESKKLHSERETHLKRIQQLTEETGKLKNEVARSQASITTAQSQVQNLQDSLGKVTTERDSLKKELEAKTLDIQEKVKTITQVKKIGRRYKTQYEELKEQHDKMVAEAASKPAQEQ 1462
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Xenopus
Match: sos2 (SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:Xenbase;Acc:XB-GENE-1006170]) HSP 1 Score: 178.718 bits (452), Expect = 6.177e-44 Identity = 354/1456 (24.31%), Postives = 674/1456 (46.29%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVI-RSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGV--DSPDGSAHLLSPVQ-DGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEK----EIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQ------LSSIQIYLNKP--QIEQANEDQI-----ELKSKIKQLTLELKQE--------------KSKYQSSLEMW---QAKFSESNAVIDTLKSQLNS-----ENRAS-SSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELER----LLGDKTNAFDMLNGEMS-LLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAIL--------QRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE---LKTQIEEYERSLKDKENQLESLKEISDKNQAETQKM--------------SSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKEL--QALKKEIVEIKQLLDES 4438
RR +EL + ++I L L E T ++E ++ +++++ +R K EQ +++ ++ L+ E+K E+L + NE + + L+ K++E+ + ++ LK +L++ E L+ E Q + + ELN + + L K E++E K A+ EL + LKE E + ++ + + Q ++ +I+ + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ ++ Q++ EK+E + R+ +Y+ I++E+E KAP+LK+Q+EEH ++ +V++L K + + ++ Q E +++++ L R+ +R E DLS+Q+ L+ E+E RG + R D++S ++++VIT HLVT++NI ELQQQN RL+ R+L + +E E + + ++ K+LE A E+ ++E A+ H + + + + D+ +L S GV +PD + +P + G + + +++ + + AE++ + +LQ + R EK ++ E+H +L + ++E++ N + ++ F ++ L+ N+ + E+ LQ +L+ K+ + +L L + +L E + ++ ++ ++ E +L E+ S I+E Q L +IQ+ L + +I+Q +QI EL K+L E++Q K +Y++ L + + S+ I LK QLNS +R+S N+ E + Q+ E Q+ DL + +E Y ++ + E L Q+ EE + R+ E ++ + ++E+ + ++ ++L + + +E QV +L + L + A S KAK+ D + Q ++ A Y++EL+ HA + +AL +Q++ + + E Q+ +S L + W +R L+ E S+++S+ E L NRL L++Q+ +L K + V+S+ L + + E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ +L+ESN LR ++++ ++ L + K+ KL +I PL+ AEL K+ ++ K + LE + WR R +L+ + K + EE+K++ E++ +I +L EE LKT++ SL +NQL+S+KE K +AE K+ + ITQ++ IGR+YKT+ E L K+T + K ++L QA +KE+ E+K L+ S
Sbjct: 157 RRAQELEHLNDDIIRLNDKLKEANTAKMELQMKLDEIQSSEVSIKYREKRLEQEKELLQSQNTWLNGELKSKTEELLAVQKGKGNE-------ILELKGALENKQDEVARLEDQVKSLKSCNENLQKQAEELMNKLKETKEQQASSEEKFHNELNANIKLCNLYKSASEDSEAKSTELTRAVEELHKLLKEAGESNKSIQEQLSQMDAAKIQVEKDMGEKISNLERELENANDLLCSTKRKGVLLSEEELTAMSPTAAAVAKVVKPGMKLTELYNAFVETQDQLLMEKQENK----RITKYLDEIVKEVEAKAPILKRQREEHERMQKTVASLSAKLEQAMREIQRMQDETDKANKCSSVLERENQRLELQMKDLSQQIRVLLMELEEARGNYVQRDDDVSSANIS-------------------------------------SSSEVITQHLVTYRNIEELQQQNQRLLVALRELGEAKEREEQETTSSRVSELEKELEHALSELQQLRE-------------ARSHQMTLVESIVRQRDMYRILLSQTTGVSLPAPDEISLTSTPRKSPGVTQVVSTSTPAAVASDSTEAAEAKAALKQLQEVFENYRKEKAENDRMLNEQHD----KLQEQVTELRSQNTKISTQLEFASKRYEMLQDNVEGYRREITTLQEKTQKLSATTQKQEQIINTLTQDLRAANEKLAVAEVRAENLKREKELLKMSEVRLTQERE------SLIAEQRGQNLLLTNLQTIQVTLERSETEIKQRYNNQIERLEQELAQTKKKLEHEIEQRHLLGKNQDVQVLELKKQYETELNLHNNTKELLKNSHKEISVLKQQLNSFELQLASRSSQQDVNIEDVEEIKTKLRQS-----------EEQVNDLKERLKTATSNVEQYRSVVLSLEESLNKEKQVTEEARKTIEVRLKEASEYQSQLEKKMMESEKEKQELRDEKHKTVEQMEQQVTQLRQSHSSLQAEVQQALQRATTSASNEQKAKQ-----DCQEQARIAAEAQNKYERELMLHAADVEALQAAKEQLASAASVRQKFEETAQKA-------ESQLLECTASWEERERMLKEEVSQIQSRCEDLEKQNRL--LHEQIESLSKKM----VSSVQEGALNISFGEEGKSQEQVMEILRFVRREKEIAEARFEVAQVECLRYRQRIEHMEREVHELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVLIESNRILREEKEKQEQELQQLQAKIRKLESNILPLQESNAELSEKSGMLQAEK---KLLEEDVKRWRARTQHLLNQQKDTDAEEYKKLLSEREVNTKRI----------QQLTEETGKLKTEVARTNASLNTCQNQLQSVKEDLTKIKAEKDKLQKELDAKILDIQEKTKTITQVKKIGRRYKTQYEEL-----KVTHDTVTKAEQLQEQASQKEMQELKDSLERS 1494
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Xenopus
Match: sos2 (SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:Xenbase;Acc:XB-GENE-1006170]) HSP 1 Score: 177.948 bits (450), Expect = 8.902e-44 Identity = 354/1456 (24.31%), Postives = 674/1456 (46.29%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVI-RSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGV--DSPDGSAHLLSPVQ-DGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEK----EIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQ------LSSIQIYLNKP--QIEQANEDQI-----ELKSKIKQLTLELKQE--------------KSKYQSSLEMW---QAKFSESNAVIDTLKSQLNS-----ENRAS-SSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELER----LLGDKTNAFDMLNGEMS-LLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAIL--------QRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE---LKTQIEEYERSLKDKENQLESLKEISDKNQAETQKM--------------SSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKEL--QALKKEIVEIKQLLDES 4438
RR +EL + ++I L L E T ++E ++ +++++ +R K EQ +++ ++ L+ E+K E+L + NE + + L+ K++E+ + ++ LK +L++ E L+ E Q + + ELN + + L K E++E K A+ EL + LKE E + ++ + + Q ++ +I+ + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ ++ Q++ EK+E + R+ +Y+ I++E+E KAP+LK+Q+EEH ++ +V++L K + + ++ Q E +++++ L R+ +R E DLS+Q+ L+ E+E RG + R D++S ++++VIT HLVT++NI ELQQQN RL+ R+L + +E E + + ++ K+LE A E+ ++E A+ H + + + + D+ +L S GV +PD + +P + G + + +++ + + AE++ + +LQ + R EK ++ E+H +L + ++E++ N + ++ F ++ L+ N+ + E+ LQ +L+ K+ + +L L + +L E + ++ ++ ++ E +L E+ S I+E Q L +IQ+ L + +I+Q +QI EL K+L E++Q K +Y++ L + + S+ I LK QLNS +R+S N+ E + Q+ E Q+ DL + +E Y ++ + E L Q+ EE + R+ E ++ + ++E+ + ++ ++L + + +E QV +L + L + A S KAK+ D + Q ++ A Y++EL+ HA + +AL +Q++ + + E Q+ +S L + W +R L+ E S+++S+ E L NRL L++Q+ +L K + V+S+ L + + E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ +L+ESN LR ++++ ++ L + K+ KL +I PL+ AEL K+ ++ K + LE + WR R +L+ + K + EE+K++ E++ +I +L EE LKT++ SL +NQL+S+KE K +AE K+ + ITQ++ IGR+YKT+ E L K+T + K ++L QA +KE+ E+K L+ S
Sbjct: 169 RRAQELEHLNDDIIRLNDKLKEANTAKMELQMKLDEIQSSEVSIKYREKRLEQEKELLQSQNTWLNGELKSKTEELLAVQKGKGNE-------ILELKGALENKQDEVARLEDQVKSLKSCNENLQKQAEELMNKLKETKEQQASSEEKFHNELNANIKLCNLYKSASEDSEAKSTELTRAVEELHKLLKEAGESNKSIQEQLSQMDAAKIQVEKDMGEKISNLERELENANDLLCSTKRKGVLLSEEELTAMSPTAAAVAKVVKPGMKLTELYNAFVETQDQLLMEKQENK----RITKYLDEIVKEVEAKAPILKRQREEHERMQKTVASLSAKLEQAMREIQRMQDETDKANKCSSVLERENQRLELQMKDLSQQIRVLLMELEEARGNYVQRDDDVSSANIS-------------------------------------SSSEVITQHLVTYRNIEELQQQNQRLLVALRELGEAKEREEQETTSSRVSELEKELEHALSELQQLRE-------------ARSHQMTLVESIVRQRDMYRILLSQTTGVSLPAPDEISLTSTPRKSPGVTQVVSTSTPAAVASDSTEAAEAKAALKQLQEVFENYRKEKAENDRMLNEQHD----KLQEQVTELRSQNTKISTQLEFASKRYEMLQDNVEGYRREITTLQEKTQKLSATTQKQEQIINTLTQDLRAANEKLAVAEVRAENLKREKELLKMSEVRLTQERE------SLIAEQRGQNLLLTNLQTIQVTLERSETEIKQRYNNQIERLEQELAQTKKKLEHEIEQRHLLGKNQDVQVLELKKQYETELNLHNNTKELLKNSHKEISVLKQQLNSFELQLASRSSQQDVNIEDVEEIKTKLRQS-----------EEQVNDLKERLKTATSNVEQYRSVVLSLEESLNKEKQVTEEARKTIEVRLKEASEYQSQLEKKMMESEKEKQELRDEKHKTVEQMEQQVTQLRQSHSSLQAEVQQALQRATTSASNEQKAKQ-----DCQEQARIAAEAQNKYERELMLHAADVEALQAAKEQLASAASVRQKFEETAQKA-------ESQLLECTASWEERERMLKEEVSQIQSRCEDLEKQNRL--LHEQIESLSKKM----VSSVQEGALNISFGEEGKSQEQVMEILRFVRREKEIAEARFEVAQVECLRYRQRIEHMEREVHELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVLIESNRILREEKEKQEQELQQLQAKIRKLESNILPLQESNAELSEKSGMLQAEK---KLLEEDVKRWRARTQHLLNQQKDTDAEEYKKLLSEREVNTKRI----------QQLTEETGKLKTEVARTNASLNTCQNQLQSVKEDLTKIKAEKDKLQKELDAKILDIQEKTKTITQVKKIGRRYKTQYEEL-----KVTHDTVTKAEQLQEQASQKEMQELKDSLERS 1506
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Xenopus
Match: sos2 (SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:Xenbase;Acc:XB-GENE-1006170]) HSP 1 Score: 177.563 bits (449), Expect = 1.099e-43 Identity = 354/1456 (24.31%), Postives = 674/1456 (46.29%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVI-RSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGV--DSPDGSAHLLSPVQ-DGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEK----EIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQ------LSSIQIYLNKP--QIEQANEDQI-----ELKSKIKQLTLELKQE--------------KSKYQSSLEMW---QAKFSESNAVIDTLKSQLNS-----ENRAS-SSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELER----LLGDKTNAFDMLNGEMS-LLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAIL--------QRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE---LKTQIEEYERSLKDKENQLESLKEISDKNQAETQKM--------------SSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKEL--QALKKEIVEIKQLLDES 4438
RR +EL + ++I L L E T ++E ++ +++++ +R K EQ +++ ++ L+ E+K E+L + NE + + L+ K++E+ + ++ LK +L++ E L+ E Q + + ELN + + L K E++E K A+ EL + LKE E + ++ + + Q ++ +I+ + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ ++ Q++ EK+E + R+ +Y+ I++E+E KAP+LK+Q+EEH ++ +V++L K + + ++ Q E +++++ L R+ +R E DLS+Q+ L+ E+E RG + R D++S ++++VIT HLVT++NI ELQQQN RL+ R+L + +E E + + ++ K+LE A E+ ++E A+ H + + + + D+ +L S GV +PD + +P + G + + +++ + + AE++ + +LQ + R EK ++ E+H +L + ++E++ N + ++ F ++ L+ N+ + E+ LQ +L+ K+ + +L L + +L E + ++ ++ ++ E +L E+ S I+E Q L +IQ+ L + +I+Q +QI EL K+L E++Q K +Y++ L + + S+ I LK QLNS +R+S N+ E + Q+ E Q+ DL + +E Y ++ + E L Q+ EE + R+ E ++ + ++E+ + ++ ++L + + +E QV +L + L + A S KAK+ D + Q ++ A Y++EL+ HA + +AL +Q++ + + E Q+ +S L + W +R L+ E S+++S+ E L NRL L++Q+ +L K + V+S+ L + + E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ +L+ESN LR ++++ ++ L + K+ KL +I PL+ AEL K+ ++ K + LE + WR R +L+ + K + EE+K++ E++ +I +L EE LKT++ SL +NQL+S+KE K +AE K+ + ITQ++ IGR+YKT+ E L K+T + K ++L QA +KE+ E+K L+ S
Sbjct: 133 RRAQELEHLNDDIIRLNDKLKEANTAKMELQMKLDEIQSSEVSIKYREKRLEQEKELLQSQNTWLNGELKSKTEELLAVQKGKGNE-------ILELKGALENKQDEVARLEDQVKSLKSCNENLQKQAEELMNKLKETKEQQASSEEKFHNELNANIKLCNLYKSASEDSEAKSTELTRAVEELHKLLKEAGESNKSIQEQLSQMDAAKIQVEKDMGEKISNLERELENANDLLCSTKRKGVLLSEEELTAMSPTAAAVAKVVKPGMKLTELYNAFVETQDQLLMEKQENK----RITKYLDEIVKEVEAKAPILKRQREEHERMQKTVASLSAKLEQAMREIQRMQDETDKANKCSSVLERENQRLELQMKDLSQQIRVLLMELEEARGNYVQRDDDVSSANIS-------------------------------------SSSEVITQHLVTYRNIEELQQQNQRLLVALRELGEAKEREEQETTSSRVSELEKELEHALSELQQLRE-------------ARSHQMTLVESIVRQRDMYRILLSQTTGVSLPAPDEISLTSTPRKSPGVTQVVSTSTPAAVASDSTEAAEAKAALKQLQEVFENYRKEKAENDRMLNEQHD----KLQEQVTELRSQNTKISTQLEFASKRYEMLQDNVEGYRREITTLQEKTQKLSATTQKQEQIINTLTQDLRAANEKLAVAEVRAENLKREKELLKMSEVRLTQERE------SLIAEQRGQNLLLTNLQTIQVTLERSETEIKQRYNNQIERLEQELAQTKKKLEHEIEQRHLLGKNQDVQVLELKKQYETELNLHNNTKELLKNSHKEISVLKQQLNSFELQLASRSSQQDVNIEDVEEIKTKLRQS-----------EEQVNDLKERLKTATSNVEQYRSVVLSLEESLNKEKQVTEEARKTIEVRLKEASEYQSQLEKKMMESEKEKQELRDEKHKTVEQMEQQVTQLRQSHSSLQAEVQQALQRATTSASNEQKAKQ-----DCQEQARIAAEAQNKYERELMLHAADVEALQAAKEQLASAASVRQKFEETAQKA-------ESQLLECTASWEERERMLKEEVSQIQSRCEDLEKQNRL--LHEQIESLSKKM----VSSVQEGALNISFGEEGKSQEQVMEILRFVRREKEIAEARFEVAQVECLRYRQRIEHMEREVHELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVLIESNRILREEKEKQEQELQQLQAKIRKLESNILPLQESNAELSEKSGMLQAEK---KLLEEDVKRWRARTQHLLNQQKDTDAEEYKKLLSEREVNTKRI----------QQLTEETGKLKTEVARTNASLNTCQNQLQSVKEDLTKIKAEKDKLQKELDAKILDIQEKTKTITQVKKIGRRYKTQYEEL-----KVTHDTVTKAEQLQEQASQKEMQELKDSLERS 1470
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Xenopus
Match: sos2 (SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:Xenbase;Acc:XB-GENE-1006170]) HSP 1 Score: 174.481 bits (441), Expect = 9.111e-43 Identity = 355/1452 (24.45%), Postives = 673/1452 (46.35%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVI-RSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGV--DSPDGSAHLLSPVQ-DGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEK----EIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQ------LSSIQIYLNKP--QIEQANEDQI-----ELKSKIKQLTLELKQE--------------KSKYQSSLEMW---QAKFSESNAVIDTLKSQLNS-ENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELER----LLGDKTNAFDMLNGEMS-LLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAIL--------QRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE---LKTQIEEYERSLKDKENQLESLKEISDKNQAETQKM--------------SSLITQLRDIGRKYKTESESLS-SEIVKITDEKENKCKEL--QALKKEIVEIKQLLDES 4438
RR +EL + ++I L L E T ++E ++ +++++ +R K EQ +++ ++ L+ E+K E+L + NE + + L+ K++E+ + ++ LK +L++ E L+ E Q + + ELN + + L K E++E K A+ EL + LKE E K ++ +++S L + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ ++ Q++ EK+E + R+ +Y+ I++E+E KAP+LK+Q+EEH ++ +V++L K + + ++ Q E +++++ L R+ +R E DLS+Q+ L+ E+E RG + R D++S ++++VIT HLVT++NI ELQQQN RL+ R+L + +E E + + ++ K+LE A E+ ++E A+ H + + + + D+ +L S GV +PD + +P + G + + +++ + + AE++ + +LQ + R EK ++ E+H +L + ++E++ N + ++ F ++ L+ N+ + E+ LQ +L+ K+ + +L L + +L E + ++ ++ ++ E +L E+ S I+E Q L +IQ+ L + +I+Q +QI EL K+L E++Q K +Y++ L + + S+ I LK QLNS E + +S ++ I + V I+T K E Q+ DL + +E Y ++ + E L Q+ EE + R+ E ++ + ++E+ + ++ ++L + + +E QV +L + L + A S KAK+ D + Q ++ A Y++EL+ HA + +AL +Q++ + + E Q+ +S L + W +R L+ E S+++S+ E L NRL L++Q+ +L K + V+S+ L + + E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ +L+ESN LR ++++ ++ L + K+ KL +I PL+ AEL K+ ++ K + LE + WR R +L+ + K + EE+K++ E++ +I +L EE LKT++ SL +NQL+S+KE K +AE K+ + ITQ++ IGR+YKT+ E L + + + K ++L QA +KE+ E+K L+ S
Sbjct: 128 RRAQELEHLNDDIIRLNDKLKEANTAKMELQMKLDEIQSSEVSIKYREKRLEQEKELLQSQNTWLNGELKSKTEELLAVQKGKGNE-------ILELKGALENKQDEVARLEDQVKSLKSCNENLQKQAEELMNKLKETKEQQASSEEKFHNELNANIKLCNLYKSASEDSEAKSTELTRAVEELHKLLKEAGE----CKSDYAIVEKDMGEKISNL-------ERELENANDLLCSTKRKGVLLSEEELTAMSPTAAAVAKVVKPGMKLTELYNAFVETQDQLLMEKQENK----RITKYLDEIVKEVEAKAPILKRQREEHERMQKTVASLSAKLEQAMREIQRMQDETDKANKCSSVLERENQRLELQMKDLSQQIRVLLMELEEARGNYVQRDDDVSSANIS-------------------------------------SSSEVITQHLVTYRNIEELQQQNQRLLVALRELGEAKEREEQETTSSRVSELEKELEHALSELQQLRE-------------ARSHQMTLVESIVRQRDMYRILLSQTTGVSLPAPDEISLTSTPRKSPGVTQVVSTSTPAAVASDSTEAAEAKAALKQLQEVFENYRKEKAENDRMLNEQHD----KLQEQVTELRSQNTKISTQLEFASKRYEMLQDNVEGYRREITTLQEKTQKLSATTQKQEQIINTLTQDLRAANEKLAVAEVRAENLKREKELLKMSEVRLTQERE------SLIAEQRGQNLLLTNLQTIQVTLERSETEIKQRYNNQIERLEQELAQTKKKLEHEIEQRHLLGKNQDVQVLELKKQYETELNLHNNTKELLKNSHKEISVLKQQLNSFELQLASHKDVNIED---VEEIKT------KLRQSEEQVNDLKERLKTATSNVEQYRSVVLSLEESLNKEKQVTEEARKTIEVRLKEASEYQSQLEKKMMESEKEKQELRDEKHKTVEQMEQQVTQLRQSHSSLQAEVQQALQRATTSASNEQKAKQ-----DCQEQARIAAEAQNKYERELMLHAADVEALQAAKEQLASAASVRQKFEETAQKA-------ESQLLECTASWEERERMLKEEVSQIQSRCEDLEKQNRL--LHEQIESLSKKM----VSSVQEGALNISFGEEGKSQEQVMEILRFVRREKEIAEARFEVAQVECLRYRQRIEHMEREVHELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVLIESNRILREEKEKQEQELQQLQAKIRKLESNILPLQESNAELSEKSGMLQAEK---KLLEEDVKRWRARTQHLLNQQKDTDAEEYKKLLSEREVNTKRI----------QQLTEETGKLKTEVARTNASLNTCQNQLQSVKEDLTKIKAEKDKLQKELDAKILDIQEKTKTITQVKKIGRRYKTQYEELKVTHDTLVAEASTAKAEQLQEQASQKEMQELKDSLERS 1457
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Xenopus
Match: sos2 (SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:Xenbase;Acc:XB-GENE-1006170]) HSP 1 Score: 173.711 bits (439), Expect = 1.724e-42 Identity = 346/1432 (24.16%), Postives = 662/1432 (46.23%), Query Frame = 2
Query: 410 LTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEE-LSRKLKREEQTSSDLSRQVCCLIREVETYRGTVI-RSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVD--SPDGSAHLLSPVQD-GTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEK----EIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQ------LSSIQIYLNKP--QIEQANEDQI-----ELKSKIKQLTLELKQE--------------KSKYQSSLEMW---QAKFSESNAVIDTLKSQLNS-----ENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNEL---ERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNL-KKLLDPSTVNSIDFAILQR---ENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE---LKTQIEEYERSLKDKENQLESLKEISDKNQAETQKM--------------SSLITQLRDIGRKYKTESESLS-SEIVKITDEKENKCKEL--QALKKEIVEIKQLLDES 4438
L E T ++E ++ +++++ +R K EQ +++ ++ L+ E+K E+L + NE + + L+ K++E+ + ++ LK +L++ E L+ E Q + + ELN + + L K E++E K A+ EL + LKE E + ++ + + Q ++ +I+ + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ ++ Q++ EK+E + R+ +Y+ I++E+E KAP+LK+Q+EEH ++ +V++L K + + ++ + KC L R+ +R E DLS+Q+ L+ E+E RG + R D++S ++++VIT HLVT++NI ELQQQN RL+ R+L + +E E + + ++ K+LE A E+ ++E A+ H + + + + D+ +L S GV +PD + +P + G + + +++ + + AE++ + +LQ + R EK ++ E+H +L + ++E++ N + ++ F ++ L+ N+ + E+ LQ +L+ K+ + +L L + +L E + ++ ++ ++ E +L E+ S I+E Q L +IQ+ L + +I+Q +QI EL K+L E++Q K +Y++ L + + S+ I LK QLNS +R+S A++ I + V I+T K E Q+ DL + +E Y ++ + E L Q+ EE + R+ E ++ + ++E+ + ++ ++L + + +E QVN + E L + A S E + D + Q ++ A Y++EL+ HA + +AL +Q++ + + E Q+ +S L + W +R L+ E S+++S+ E L NRL L++Q+ +L KK++ +++ + + + E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ +L+ESN LR ++++ ++ L + K+ KL +I PL+ AEL K+ ++ K + LE + WR R +L+ + K + EE+K++ E++ +I +L EE LKT++ SL +NQL+S+KE K +AE K+ + ITQ++ IGR+YKT+ E L + + + K ++L QA +KE+ E+K L+ S
Sbjct: 85 LKEANTAKMELQMKLDEIQSSEVSIKYREKRLEQEKELLQSQNTWLNGELKSKTEELLAVQKGKGNE-------ILELKGALENKQDEVARLEDQVKSLKSCNENLQKQAEELMNKLKETKEQQASSEEKFHNELNANIKLCNLYKSASEDSEAKSTELTRAVEELHKLLKEAGESNKSIQEQLSQMDAAKIQVEKDMGEKISNLERELENANDLLCSTKRKGVLLSEEELTAMSPTAAAVAKVVKPGMKLTELYNAFVETQDQLLMEKQENK----RITKYLDEIVKEVEAKAPILKRQREEHERMQKTVASLSAKLEQAMRRMQDETDKAN----KCSSVLERENQRLELQMKDLSQQIRVLLMELEEARGNYVQRDDDVSSANIS-------------------------------------SSSEVITQHLVTYRNIEELQQQNQRLLVALRELGEAKEREEQETTSSRVSELEKELEHALSELQQLRE-------------ARSHQMTLVESIVRQRDMYRILLSQTTGVSLPAPDEISLTSTPRKSPGVTQVVSTSTPAAVASDSTEAAEAKAALKQLQEVFENYRKEKAENDRMLNEQHD----KLQEQVTELRSQNTKISTQLEFASKRYEMLQDNVEGYRREITTLQEKTQKLSATTQKQEQIINTLTQDLRAANEKLAVAEVRAENLKREKELLKMSEVRLTQERE------SLIAEQRGQNLLLTNLQTIQVTLERSETEIKQRYNNQIERLEQELAQTKKKLEHEIEQRHLLGKNQDVQVLELKKQYETELNLHNNTKELLKNSHKEISVLKQQLNSFELQLASRSSQQADVNIED---VEEIKT------KLRQSEEQVNDLKERLKTATSNVEQYRSVVLSLEESLNKEKQVTEEARKTIEVRLKEASEYQSQLEKKMMESEKEKQELRDEKHKTVEQMEQQVNIMSLPEVLQAEVQQALQRATTSAS----NEQKAKQDCQEQARIAAEAQNKYERELMLHAADVEALQAAKEQLASAASVRQKFEETAQKA-------ESQLLECTASWEERERMLKEEVSQIQSRCEDLEKQNRL--LHEQIESLSKKMVSSVQEGALNISFGEEGKSQEQVMEILRFVRREKEIAEARFEVAQVECLRYRQRIEHMEREVHELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVLIESNRILREEKEKQEQELQQLQAKIRKLESNILPLQESNAELSEKSGMLQAEK---KLLEEDVKRWRARTQHLLNQQKDTDAEEYKKLLSEREVNTKRI----------QQLTEETGKLKTEVARTNASLNTCQNQLQSVKEDLTKIKAEKDKLQKELDAKILDIQEKTKTITQVKKIGRRYKTQYEELKVTHDTLVAEASTAKAEQLQEQASQKEMQELKDSLERS 1406
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Mouse
Match: Tpr (translocated promoter region, nuclear basket protein [Source:MGI Symbol;Acc:MGI:1922066]) HSP 1 Score: 162.155 bits (409), Expect = 4.665e-39 Identity = 348/1425 (24.42%), Postives = 655/1425 (45.96%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQ---------ALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTL--NGKVAESQEKID--KLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL---AKKSEENVSLASQ--------LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSE-NRASSSANLTITESCTVGVI---------QTAPEKIEKTG-----------DLESQL----EDLSVLNYSLKKQ---IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAI---LQRENDWN----EVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS----------------SLITQLRDIGRKYKTESESLSSE 4342
R +E+ Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ Q E+ +I + + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y+ Q++ EK+E + R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + +++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+S ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE + E++ ++E + QL ++ Q+ + + A+ + D SLL++ S S PV D T + L + + N K +EKID KLQNE +++L + +++++ N + ++ F ++ L+ N+ + E+ LQ E NQKL +K E+ ++ +Q L ++R + E + ++ + + E L +E+ + L+++ L +IQ L + + E L S+I++L E+ K K ++ +E + + K QL++E N ++ L + + Q A + ++TG DL+SQL E ++ L LK +E Y ++ + E L Q+ EE+ + R+ E + + ++E+ L + ++L+ + +S+E Q++EL++ L N S + E Q D + Q ++ A Y++EL+ HA + +AL +Q+S++ + ++L E Q + +S L + W +R L++E S+ S+ E L NRL L+DQ+ L + S +++ + L E E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ ++ME+N LR +++R+++ L + K+ KL I PL+ AEL K+ ++ K + LE + W+ R LI + K + EE++++ EK+ +I + EE R LK +I SL + +N ++SL+E D ++A T+K ITQ++ IGR+YKT+ E L ++
Sbjct: 207 RLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVAVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNE-------ILELKCNLENKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKQENK----RINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS-------------------------------------SSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSLAELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSSTSQTVSTPAPEPVIDSTEAIEAKAALKQLQEIFENYK----KEKIDSEKLQNE-----------------QLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQ----ERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTN-------LQTIQGILERSETETKQ----RLNSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEEQVNDLKERLKTSTSNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSTVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQ-------KAESQLLECKASWEERERVLKDEVSKSVSRCEDLEKQNRL--LHDQIEKLSDKVVTSMKDAVQAPLNVSLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNVEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEK---KLLEEDVKRWKARNQQLINQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGR--------LKAEIARSNASLTNNQNLIQSLRE--DLSKARTEKEGIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQFEELKAQ 1525
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Mouse
Match: Tpr (translocated promoter region, nuclear basket protein [Source:MGI Symbol;Acc:MGI:1922066]) HSP 1 Score: 160.614 bits (405), Expect = 1.286e-38 Identity = 347/1424 (24.37%), Postives = 656/1424 (46.07%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQ---------ALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTL--NGKVAESQEKID--KLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL---AKKSEENVSLASQ--------LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSE-NRASSSANLTITESCTVGVI---------QTAPEKIEKTG-----------DLESQL----EDLSVLNYSLKKQ---IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAI---LQRENDWN----EVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS----------------SLITQLRDIGRKYKTESESLSSE 4342
R +E+ Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ Q E+ +I + + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y+ Q++ EK+E + R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + +++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+S ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE + E++ ++E + QL ++ Q+ + + A+ + D SLL++ S S PV D T + L + + N K +EKID KLQNE +++L + +++++ N + ++ F ++ L+ N+ + E+ LQ E NQKL +K E+ ++ +Q L ++R + E + ++ + + E L +E+ + L+++ L +IQ L + + E L S+I++L E+ K K ++ +E + + K QL++E N ++ L + + Q A + ++TG DL+SQL E ++ L LK +E Y ++ + E L Q+ EE+ + R+ E + + ++E+ L + ++L+ + +S+E Q++EL++ L N S + E Q D + Q ++ A Y++EL+ HA + +AL +Q+S++ + ++L E Q+ +S L + W +R L++E S+ S+ E L NRL L+DQ+ L + S +++ + L E E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ ++ME+N LR +++R+++ L + K+ KL I PL+ AEL K+ ++ K + LE + W+ R LI + K + EE++++ EK+ +I ++N E + LK +I SL + +N ++SL+E D ++A T+K ITQ++ IGR+YKT+ E L ++
Sbjct: 133 RLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVAVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNE-------ILELKCNLENKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKQENK----RINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS-------------------------------------SSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSLAELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSSTSQTVSTPAPEPVIDSTEAIEAKAALKQLQEIFENYK----KEKIDSEKLQNE-----------------QLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQ----ERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTN-------LQTIQGILERSETETKQ----RLNSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEEQVNDLKERLKTSTSNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSTVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQKA-------ESQLLECKASWEERERVLKDEVSKSVSRCEDLEKQNRL--LHDQIEKLSDKVVTSMKDAVQAPLNVSLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNVEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEK---KLLEEDVKRWKARNQQLINQQKDPDTEEYRKLLSEKEIHTKRI------QQLNEE-VGRLKAEIARSNASLTNNQNLIQSLRE--DLSKARTEKEGIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQFEELKAQ 1451
BLAST of Translocated promoter region b, nuclear basket protein vs. UniProt/SwissProt
Match: sp|P12270|TPR_HUMAN (Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 1.030e-40 Identity = 345/1422 (24.26%), Postives = 656/1422 (46.13%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMK---LEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKID------KLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL---AKKSEENVSLASQ--------LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSEN----------RASSSANLTITESCTVGVIQTAPEKIEKTG-----------DLESQL----EDLSVLNYSLKKQ---IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAI---LQRENDWN----EVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI--LIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS----------------SLITQLRDIGRKYKTESESLSSEIVKI 4354
R +EL Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ LE E Q E+ +I R + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y++ ++ +++ R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + ++++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+S ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE A E++ QL+K+ ++H +Q + + + D+ +L S GV P A L V + T+ + V ES E I+ +LQ + + EK + + +++L + +++++ N + ++ F ++ L+ N+ + E+ L E NQKL +K E+ ++ +Q L ++R + E + ++ + + E L +E+ + L+++ L +IQ L + + E L S+I++L E+ K K ++ +E + + K QL++E + + T+ + + +Q A + ++TG DL SQL E ++ L LK +E Y ++ + E L Q+ EE+ + R+ E + + ++E+ L + ++L+ + +S+E Q++EL++ L N S + E Q D + Q ++ A Y++EL+ HA + +AL +Q+S++ + ++L E Q + +S L + W +R L++E S+ + E L NRL L+DQ+ L + S + + L E E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ ++ME+N LR +++R+++ L + K+ KL I PL+ AEL K+ ++ K + LE + W+ R +L+ + K + EE++++ EK+ +I L EE + LK +I SL + +N ++SLKE D N+ T+K + ITQ++ IGR+YKT+ E L ++ K+
Sbjct: 133 RLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNE-------ILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVE---QSKDQMEKEMLEKIGRLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKQSSVLERDNRRMEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS-------------------------------------SSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLESALTELE----------QLRKS---RQHQMQLVDSIVRQRDMYRILLSQTTGVAIP-LHASSLDDVSLASTPKRPSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLH----ERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTN-------LQTIQGILERSETETKQ----RLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQ-------KAESQLLECKASWEERERMLKDEVSKCVCRCEDLEKQNRL--LHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEK---KLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEE---------IGRLKAEIARSNASLTNNQNLIQSLKE--DLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKV 1455
BLAST of Translocated promoter region b, nuclear basket protein vs. UniProt/SwissProt
Match: sp|F6ZDS4|TPR_MOUSE (Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.263e-38 Identity = 348/1425 (24.42%), Postives = 655/1425 (45.96%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYL----QVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQ---------ALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTL--NGKVAESQEKID--KLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL---AKKSEENVSLASQ--------LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSE-NRASSSANLTITESCTVGVI---------QTAPEKIEKTG-----------DLESQL----EDLSVLNYSLKKQ---IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNSIDFAI---LQRENDWN----EVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS----------------SLITQLRDIGRKYKTESESLSSE 4342
R +E+ Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ Q E+ +I + + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y+ Q++ EK+E + R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + +++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+S ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE + E++ ++E + QL ++ Q+ + + A+ + D SLL++ S S PV D T + L + + N K +EKID KLQNE +++L + +++++ N + ++ F ++ L+ N+ + E+ LQ E NQKL +K E+ ++ +Q L ++R + E + ++ + + E L +E+ + L+++ L +IQ L + + E L S+I++L E+ K K ++ +E + + K QL++E N ++ L + + Q A + ++TG DL+SQL E ++ L LK +E Y ++ + E L Q+ EE+ + R+ E + + ++E+ L + ++L+ + +S+E Q++EL++ L N S + E Q D + Q ++ A Y++EL+ HA + +AL +Q+S++ + ++L E Q + +S L + W +R L++E S+ S+ E L NRL L+DQ+ L + S +++ + L E E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ ++ME+N LR +++R+++ L + K+ KL I PL+ AEL K+ ++ K + LE + W+ R LI + K + EE++++ EK+ +I + EE R LK +I SL + +N ++SL+E D ++A T+K ITQ++ IGR+YKT+ E L ++
Sbjct: 207 RLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVAVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNE-------ILELKCNLENKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKQENK----RINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS-------------------------------------SSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSLAELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSSTSQTVSTPAPEPVIDSTEAIEAKAALKQLQEIFENYK----KEKIDSEKLQNE-----------------QLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQ----ERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTN-------LQTIQGILERSETETKQ----RLNSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEEQVNDLKERLKTSTSNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSTVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQ-------KAESQLLECKASWEERERVLKDEVSKSVSRCEDLEKQNRL--LHDQIEKLSDKVVTSMKDAVQAPLNVSLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNVEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEK---KLLEEDVKRWKARNQQLINQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGR--------LKAEIARSNASLTNNQNLIQSLRE--DLSKARTEKEGIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQFEELKAQ 1525
BLAST of Translocated promoter region b, nuclear basket protein vs. UniProt/SwissProt
Match: sp|Q5EE04|TPR_XENLA (Nucleoprotein TPR (Fragment) OS=Xenopus laevis OX=8355 GN=tpr PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.021e-37 Identity = 300/1229 (24.41%), Postives = 567/1229 (46.14%), Query Frame = 2
Query: 992 INRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQ----VVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSP--DGSAHLLSPVQDGTG---DNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEK----EIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQ------LSSIQIYLNKP--QIEQANEDQI-----ELKSKIKQLTLELKQE--------------KSKYQSSLEMW---QAKFSESNAVIDTLKSQLNSE--NRASSSANLTITESCTVGV--IQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAIL--------QRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE---LKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS--------------SLITQLRDIGRKYKTESESLSSEIVKITDEKEN-KCKEL--QALKKEIVEIKQLLDES 4438
I+ + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y++ ++ EK+E + R+ +Y+ I++E+E K+P+LK+Q+EE+ ++ +V++L K + + ++ Q E +++++ L R+ +R E DLS+Q+ L+ E+E RG ++ D++S ++++VIT HLVT++NI ELQQQN RL+ R+L + +E E + + ++ K+LE A E+ ++E A+ H + + + + D+ +L S GV P D +A L S + G D + T + + + + AE++ + +LQ + R EK ++ E+H +L + ++E++ N + ++ F ++ L+ N+ + E+ LQ +L+ K+ + +L L + +L E + ++ ++ ++ E +L E+ S ++E Q L +IQ+ L + +I+Q +QI EL K+L E++Q K +Y+ L + + S+ I LK QLNS AS S+ V + ++ K+ ++ +L + DL + +E Y ++ N E L Q+ EE+ + R+ E ++ + ++E+ + ++ ++L + + +E QV +L + L + + E + D + Q ++ A Y++EL+ HA + +AL KQ++ E Q+ LE+R S W +R L+ E S+++S+ + L + L++Q+ +L K + V S+ L + + E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ +L+ESN LR + ++ ++ L + K+ KL +I PL+ AEL K+ ++ K + LE + WR R +L+ + K + EE+K++ E++ +I +L EE LKT++ SL ++QL+S+K+ K +AE +K+ ITQ++ IGR+YKT+ E L K+ E + K +L QA +KE+ E+K L S
Sbjct: 22 ISNLERELENANDLLCSTKRKGVMLSEEELTAMSPTAAAVAKVVKPGMKLTELYNAYVETQDKLLMEKQENK----RITKYLDEIVKEVEAKSPILKRQREEYERMQKTVASLSAKLEQAMREIQRMQDETDKANKCSSVLERENQRLELQIKDLSQQIRVLLMELEEARGNFVQRDDVSSANIS-------------------------------------SSSEVITQHLVTYRNIEELQQQNQRLLVALRELGEAKEREEQESTSSRVSELEKELENALSELQQLRE-------------ARSHQMTLVESIVRQRDMYRILLSQTTGVVLPAQDETA-LTSTPRKSPGVSLDGSTSTPAAVVVSDSTEAAEARAALKQLQEVFENYRKEKAENDRMLNEQHD----KLQEQVTELRSQNTKISTQLEFASKRYEMLQDNVEGYRREITALQEKTQKLSATTQKQEQIINTLTHDLRAANEKLAVAEVRAENLKREKELLKMSEVRLTQERE------SLVAEQRGQNLLLTNLQTIQVTLERSETEIKQRYNNQIEKLEQELAQTKKKLEHEIEQRHLLGKNQDVQVLELKKQYEMELNLHNNTKELLKNSHKEISVLKQQLNSFELQLASRSSQQAANRDKDVNIEDVEEIKTKLRQSEEL---VNDLKERLKTATSNVEQYRSVVLNLEESLNKEKQVTEEVRKTIEVRLKESSEYQSQLEKKMMESEKEKQELRDEKHKTVEQMEQQVTQLRQSLSSLQAEVQQALQRATTSASNEQKAKQDCQEQARIAAEAQNKYERELMLHAADVEALQAAKKQLTSASAIRHKCEETAQKA------GSQLLESRAS-WEERERMLKEEVSQIQSRCKDLEKQNGLLHEQIESLSKKM----VTSVQEGALNMSFGEEGKSQEQVMEILRFVRREKEIAEARFEVAQVECLRYRQRIEHMERELHELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVLIESNKILREENEKQEQELQQLQAKIRKLESNILPLQESNAELSEKSGMLQAEK---KLLEEDVRRWRARTQHLLSQQKDTDAEEYKKLLSEREVNTKRI----------QQLTEETGKLKTEVARTNASLNTCQSQLQSVKDDLTKIKAEKEKLQKELDAKILDIQEKIKTITQVKKIGRRYKTQYEELKVTHDKMVAEASSAKADQLQEQASQKEVQELKDSLQRS 1158
BLAST of Translocated promoter region b, nuclear basket protein vs. UniProt/SwissProt
Match: sp|F1MA98|TPR_RAT (Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.198e-37 Identity = 338/1416 (23.87%), Postives = 661/1416 (46.68%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS--LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHL--LSPVQDGTGDNNNQTNLNTISTLNG-KVAESQEKID------KLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL---AKKSEENVSLASQ--------LGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSE-NRASSSANLTITESCTVGVI---------QTAPEKIEKTG-----------DLESQL----EDLSVLNYSLKKQ---IEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETS-------ELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVN-SIDFAILQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMS----------------SLITQLRDIGRKYKTESESLSSE 4342
R +E+ Y +++ L L E T + E +L +++L+ +R K EQ +++ ++ L+TE+K ++L + NE + + L+ K+ E+ ++ + LK HL++ + L+ A E Q +++ ELN + ++ L K +++E K A+ EL + LKE E + ++ Q E+ +I + + EL AN L + K LSE E+ +M+P AA +K G +T++Y+ Y++ ++ +++ R+N+Y+ I++E+E KAP+LK+Q+EE+ + +V++L K + + ++ Q + +++++ L R +R E DLS+Q+ L+ E+E RG VIR +E+S ++++VI+ HLV+++NI ELQQQN RL+ R+L + +E E + + ++ KLE + E++ ++E +++H +Q + + + D+ +L S G+ P ++ L +S V + +Q T+ST + ES E I+ +LQ + + EK + + +++L + +++++ N + ++ F ++ L+ N+ + E+ LQ E NQKL +K E+ ++ +Q L ++R + E + ++ + + E L +E+ + L+++ L +IQ L + + E L S+I++L E+ K K ++ +E + + K QL++E N ++ L + + Q A + ++TG DL+SQL E ++ L LK +E Y ++ + E L Q+ EE+ + R+ E + + ++E+ L + ++L+ + +S+E Q+ EL++ L + S + E Q D + Q ++ A Y++EL+ HA + +AL +Q+S++ + ++L E Q + +S L + W +R L++E S +L+ Q L++++ L+D++V K + S +N S++ +E E+++++R+EKE E +++ R R + E + +L +L ER V A+T QH E+M + E+ ++ME+N LR +++R+++ L + K+ KL I PL+ AEL K+ ++ K + LE + W+ R +LI + K + EE++++ EK+ +I + EE R LK +I SL + +N ++SLKE D ++ T+K S ITQ++ IGR+YKT+ E L ++
Sbjct: 133 RLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVTVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNE-------ILELKCTLENKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS-------------------------------------SSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQNKLENSLTELEQLRE-------------SRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSSTSQ----TVSTPAPEPIIESTETIEAKAALKQLQEIFENYKKEKMDSEKLQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQ----ERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTN-------LQTIQGILERSETETKQ----RLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEEQVNDLKERLKTSASNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLTELKKTLSSVQSEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQ-------KAESQLLECKASWEERERVLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKEVVQSPLNISLNEEGKSQEQIL-EILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEK---KLLEEDVKRWKARNQHLINQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGR--------LKAEIARSNASLTNNQNLIQSLKE--DLSKVRTEKESIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQFEELKAQ 1451
BLAST of Translocated promoter region b, nuclear basket protein vs. UniProt/SwissProt
Match: sp|A1Z8P9|TPR_DROME (Nucleoprotein TPR OS=Drosophila melanogaster OX=7227 GN=Mtor PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.871e-8 Identity = 88/332 (26.51%), Postives = 165/332 (49.70%), Query Frame = 2
Query: 3605 VIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEE------------KSRVNSE----------LLEELKTQIEEYE------------------RSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYK------------TESESLSSEIVKITDEKENKCKELQALKKEIVEIKQLLDESKK 4444
+I++LR+EK+ + + + RL +++ Q++ +D+LN L +ER + + +H E++ ++E+ + +SN LR +R + +AE T+++ + + + PL+ K ++IE + ++ SL E WR+R + L+EKS + NPEEFK++ E++ L + E+E K R+N+E L E K Q++E+ R L+ +E L++ +E+ K++ K + + QLR + ++YK TES ++E+ K+ E E +L+ALK E +I + DE KK
Sbjct: 1207 IIKFLRKEKDLFAAKLDILKAENARLISEHAIQQKKVDELNGYLNQERAKSQTDVVSANKHEEVLRKIETLNAITDSNRILREERNALTLRVAELTDRISSVEKELFPLQCSNKELTSKIEEINVENTSLRTEAIKWRQRANALVEKSNR-NPEEFKRLQAEREHLAKLLTAEKELNKKQSDELTVLKQRMNTEIPMLNKQMQILDEARKKQVDEFTNLKQNNTRQTQDIMELKNRLLQKEEELLKANEELETKDKTIADKETKEL-QLRKLAKRYKDFYIGLQSQGGGTES---AAELEKVRSELEEVNNQLRALKDEHEKITKECDEVKK 1533
BLAST of Translocated promoter region b, nuclear basket protein vs. TrEMBL
Match: A0A0V0J6Z3 (TPR_MLP1_2 domain-containing protein (Fragment) OS=Schistocephalus solidus OX=70667 GN=TR150502 PE=4 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 2.832e-74 Identity = 375/1313 (28.56%), Postives = 631/1313 (48.06%), Query Frame = 2
Query: 629 ELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQE------------EHSFLEL--SVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQ---QEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQ-------NEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQL---NSENRASSSANLTITESCTVGVIQ------TAPEKIEKTGD---------LESQLEDLSVLNYSLKKQIEA-------YHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVN--------ELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQET-IILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSI---DFAI-LQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEELKTQ-IEEYERSLKDKENQLESLKEISD------KNQAETQ-----KMSSLITQLRDIGRKYKTESESLSSEI 4345
EL ++ E +N + T+ KL++ + L N + E L+ + N++ L EL Q + +L KE+ E E K E A+ +QE LK E +++ E E L+ F ++ L + N EL A + EKFR++ LSE E++ +NPA A I++LKRG S+TQIYS+Y+QVV E++ LR+D++RL E++ ++ +LE+K PLL+ QQE EH+F L L + ++DN R+ R+ R +Q+ D+S QV L+RE+E RGTVIRSDE ++ P+ S ++ L+ + S + I AN VI +LVTF ++ ELQ QN +L+ RDL+ Q +E+T+ + N + +++ K++ E++ + K+ + Q+ Q + H S SL + ++ G L+P + + N +++NT ++N S I+KL+ ++ + R+EK ++ ++++L SE ++ N L +++ F EK +LE N+ N + E+A L+ + A + L + RL E +++Q+ +H + E +L E + ++ +QL IQ L+ Q E+ + Q E ++ L +EL + + + LE +NA TL+++L +AS L + S Q TAP + E + D L ++L DL SL+ +EA Y +L E + S+ +E+E F E Q + E EL N + + RQ N N R L +++N EL D T A + + + E + S++E + + A E Y+ EL HA++ L E K ++ L L+ + LRD S E + +W E+ L + SE ++ + L +++ L +QL L+KLL+ ST ++I F +Q D+ +++ YLR++K E + ++ RL + + E + L L EERR V+AET +QHA +M ++E +L ESN LR +R+ V+E A +L L EP++ + KS + + + + +SLE ERD W++RC L+E +K+++PEE+KQ C E+D+LQ + L E ++V SE E K +E + L QLE+ K +SD ++Q +TQ K + I +LR+I RKY+ E++ L S I
Sbjct: 226 ELSTRKVEFENSQATLLKLEDLVKKLTESNEDHIEKLKQRTDELINLEQLHANELGAQKRLTDLYKEQATEAEKKVEQMQKAVASMQELLKAGHEHVLQLQSEKEALLNAFTEEKKNLLEKSNTLALELRSAKEIVEKFRIQGLSEDELRKLNPAVATTIASLKRGRSLTQIYSDYVQVVEERDLLRLDKERLTEHVREMVTQLEEKGPLLRSQQEAFIKSKSRVEELEHAFSALQNDFKELHENFEDNK--------------RRAGYFQRQNLRLKQSCRDMSAQVKTLLRELEIARGTVIRSDE----SDRPD-----------SSSSGGDRLADESLDSRKLLAACIAANSVIDDNLVTFASLSELQSQNQKLLLVARDLASQLEDRESTDEHLA-NRVAELSAKVDALSGEVNVARLAAKEARSEADLAVRQRDAYQRILERHSIST--SLADVSSSVLEESVGPGQSLTPYDNLSMLANRDSSINT--SMNVTTQPSSPAINKLEESLCSLHSDFQQYREEKAKTDAVYTETVEKLRLEASEARVLNQKLASQLDFTHEKFRTLEANVANYKQEIAILREMNARYTTSAAASDDALTHLREEAARTADRLTAAEADSRQLARQLEHSRANETRLTQELESLRKQAVMHEQLMHQLQLIQSNLD--QREEMEKRQAE--RRVTSLEMELAEVRRRSDERLEA-------ANAQSSTLQTELLLARQSLKASEDELLELRASLAEATKQRAPSPKTAPSQPEASADDLKTLEHNNLANRLRDLERECASLRVSLEAAREQSAEYQKLANEMEEHIARLSRERDELEKTFTTESEERNQ-RCEFLELQLNLERMERQDVVNENVR---LSEELNKLRTDLRAELAAARTDLTAAIERRDAALEF----ENKARSEIEAHEKTAREAREKYEMELKLHAEDVQLLTEARKVSCGASSEISALKVELEASRARLRD-ANSSAETQACLWDEERAKLSAKISESNAEVDRLQEQILKLTEQLNGLRKLLEQSTSDTIAAEQFTTQIQASEDFAQILDYLRRQKSIAEAAEEAANAEVARLTLRAKSLERQVADLQTKLAEERRNSEVKAETSRQHAHLMNQLEQLNLLSESNRLLRQERETVREAAARAEAQLAALRADTEPMRDQCKSLEDARDLLISEKKSLEEERDRWKERCTRLVETTKRMDPEEYKQACNERDELQRR-LRSLEDAKVASEREAEAKVNGLEAHIAELSTTVAQLEAQKRVSDVQISSIESQCKTQKEELEKRQTNIIKLREIARKYRHETDELRSRI 1483
BLAST of Translocated promoter region b, nuclear basket protein vs. TrEMBL
Match: A0A087VYJ1 (Nucleoprotein TPR OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000102000 PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 3.893e-72 Identity = 414/1576 (26.27%), Postives = 703/1576 (44.61%), Query Frame = 2
Query: 629 ELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENM--INENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTI--------STLNGKVAESQ------------EKIDKLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNK--------------------PQIEQANED-QIELKSKIKQLTLELKQEKSKYQSS------LEMWQAKFSESNAVIDTLKSQLNSENRASSSAN--LTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQ-----------EKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDF----AILQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKS----RVNSELLEELKTQIEEYERSLKDKENQLESL--KEISDKNQAETQ-----KMSSLITQLRDIGRKYKTESESLSSEI---------VKITDEK--------ENKCKELQ-------ALKKEIVEIKQLLD--ESKKDCXXXXXXXXXXXXXXXXXNDEFVKKLGSILQCQNSPIDIIETLEKIM-----KEYQNKIQLLEARESELKFRMQVIEGHLTNLRLENERMKKQLDSRL----------------NMMNSLDDENGTSE-ENSTEMLPTTSSSSGCHGVPAVARVAANVHPVVQKPQNIVPGXXXXXXXXXXXXXXXCTSTARQTAEIRPI 4981
EL +R E++N + TI KL++ + L + N + E L+ + N + L EL Q + +L +++ + E K E A+ E+QE LK+ E K++ E ++ A + +L E EL A + +KFR++ LSE E++ +NPA A I++LKRG S+T+IYS+Y+QVV E++ L++D++RL E++ ++ +LE+KAPLL+ QQE V+ L + L+ Q E+ R+ R+ K +Q+ DLS QV L+ E+ET RGTVI S E E I + F S N+ S ++ ++ S TA VI +LVTF+++ ELQ QN RL+ RDL+ Q E E+ + + + ++ K+E E+D + + + Q+ AL H + PD S H Q N N + + S L+ +Q E + L E + R++K E ++ +I+ L + +E ++ N L ++ F EK +LE N+ N + E++ L+ + A E ++L Q RL E E +Q+ +H + E +L+ E + + +QL SIQI L ++++ +ED Q +L S L EL + +S+ L A S+ + +T S L ++ +SSSAN LT + + Q P ++ +LE + L V +++KQ Y L E+ + ++ E +E I + +Q EK E ++L+ L+ + +++ K L D + ++ L D A + + L E S++ ++ + A E Y+ EL HAQ+ L E K + + + L L+ T Q + L + S+W + L + ++ L +++ L +Q+VNL+KL+D S+ S ++ D+ +++YLR++K E + +++RL + + E + L L EER+ V+ ET QHA IM ++E +L ESN LR +RQ +++ E+L L I+PL+ + K + E + L+ RS+ ERD W++RC L+E SK+++PEE+KQ C +D+LQ + EE R ++ + L+ QI E +L +E++ +S K S + Q + Q K IT+LR+IGRKY+ E++ L ++ +K T+E N LQ L++E+ ++QL+D ES D S +GS L + L I+ + Y+ + Q E +SE RMQ+IE L + + + +K QL S + + ++D + E + + + + +S+ G R AA V PV P++ S +S ARQTAEIRP+
Sbjct: 226 ELASRRTELENAQVTIAKLEDLVKQLTKSNDDHIEKLKLRTDELVNTEQLHTNELEAQRRLTDLYRDQASDVEKKYEEMQKAVTEMQEMLKQGHEHVSKLQSEKTIVVNALAAEKDKLMSENVALARELAAAKEIVDKFRIQGLSEDELRRLNPAVATTIASLKRGRSLTEIYSDYVQVVEERDLLKLDKERLTEHIREMMAQLEEKAPLLRSQQEAFYKSRDRVAELETQLGAALTNAKEKQDVAEDQRRRSSYFQRQNKLLKQSCKDLSIQVKTLLHELETARGTVITS-------TEEENI---QVFPDSSTNDIDSRTLLNLCSADNS-----TAASVIDKNLVTFRSLSELQTQNARLLLVARDLASQLEDHESKKDLLASQVSEITAKVEVLSGEVDVARLAASEARSEANFAARQRDACMALLQRH--------------AIPLPDFSVHNEQTPQKCVDSNTNPHDSAIVLAHLDRSASALDWTGGSAQMLHQSQTIVKLEESLLSLHAEFKQYREDKARSDEVYTGTIETLRRESTEARILNQKLAGQLDFTHEKFRTLESNVANYKQEISILREMNARYTTSAAASDEALIALREQSARTGDRLAAAEVECRQLIRQLEHTRANEARLSHELEIAQKTTLMHEHLMHQLQSIQINLEHREEMEARKATRHIEALEAKLEELKKGSEDRQQQLLSLNATLQTELSHTRQALRSAEEEVSQLRAAIAANKPSSPISNTGSSDLQTQA-SSSSANEQLTSADVTSGDGAQLMPTQLR---NLEHECASLRVSLEAVRKQCAEYQHLGIEMETHIAKLTKEREHLEHTHATEIEDASQRCELLSLQLVLEKSERQDLIHEKTLLTEEYQASL----KKLRDDLASVQLALRD---AEERQEAALKL----ESSAHSEVAAHQKAAQEAREKYETELRLHAQDVQLLTEARKMADEARAEVEGLRVALETTKTSLGQSEEQLTAQTSLWEESRARLVKRVEDADAEINRLQEQILTLTEQIVNLRKLMDRSSDQSFSCEESGGQIKESEDFIHLLEYLRRQKSIAEAAEESANAEVSRLHLRTKTLEMQVADLEAKLAEERQRNEVQLETSSQHANIMQQIEQVNLLSESNRLLRQERQMIRDAAVRAEERLTALAREIDPLRTQCKELEDAREILALEKRSIAEERDRWKERCTRLVETSKRMDPEEYKQACNARDQLQATLKATEEVKAIVERESAARIAALEQQISELSSNLVQRESEGQSFTAKLASLEGQCKIQEDELAKRQVKITKLREIGRKYRQEADELKRQLSNTQEQEKSIKTTEEAIIAVRADLLNAQANLQIEQEQSSMLRQEMDHLQQLIDRVESLPDLDPIKHSPPESL-------------IGSSLPTSSRASVTYNRLNHILSIMIAEFYRMRGQAEE--QSERLLRMQLIESQLAKTKSQCDELKAQLASVMAAASTEAVSTVHSAATTLAEAVDQPISSPETKGNAAVTKSVTSTVATGGASWGLRAAATVQPV-------------QTSPPSTASPSPLSSAARQTAEIRPL 1729
BLAST of Translocated promoter region b, nuclear basket protein vs. TrEMBL
Match: A0A068WV05 (Nucleoprotein TPR OS=Echinococcus granulosus OX=6210 GN=EgrG_000102000 PE=4 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.967e-70 Identity = 420/1568 (26.79%), Postives = 725/1568 (46.24%), Query Frame = 2
Query: 629 ELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRS-DEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENM--INENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKS----DLRSLLASGAIGVDS---PDGSAHLLSPVQDGTGDNNNQTNLNT-ISTLNGKVAESQEKIDKLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYL-NKPQIE--QANEDQIELKSKIKQL----------------TL--ELKQEKSKYQSS------LEMWQAKFSESNAVIDTLKSQLNSENRASSSAN--LTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAF-----DMLNGEMSLLKAKECQ---------LISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDF----AILQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEE----KSRVNSELLEELKTQIEEYERSLKDKENQLESL--KEISDKNQAETQ-----KMSSLITQLRDIGRKYKTESESLSSEI---------VKITDEK--------ENKCKELQ-------ALKKEIVEIKQLLD--ESKKDCXXXXXXXXXXXXXXXXXNDEFVKKLGSILQCQNSPIDIIETLEKIMKE-----YQNKIQLLEARESELKFRMQVIEGHLTNLRLENERMKKQLDSRLNMMNS---------------LDDENGTSEENSTEMLPTTSSSS--GCHGVPAVARVAANVHPVVQKPQNIVPGXXXXXXXXXXXXXXXCTSTARQTAEIRPI 4981
EL +R E++N + TI KL++ + L + N + E L+ + N + L EL Q + +L +++ + E K E A+ E+QE LK+ E K++ E + ++ A + +L E EL A + +KFR++ LSE E++ +NPA A I++LKRG S+T+IYS+Y+QVV E++ L++D++RL E++ ++ +LE+KAPLL+ QQE V+ L + L+ Q E+ R+ R+ K +Q+ DLS QV L+ E+ET RGTVI S +E +I F S N+ S ++ ++ S TA VI +LVTF+++ ELQ QN RL+ RDL+ Q E E+ + N + ++ K+E E+D + + + Q+ +AL H +R+ L VDS P SA +L+ + D + ++T +T + + + + +E + L E + R++K E ++ +I++L + +E ++ N L A++ F EK +LE N+ N + E++ L+ + A E ++L Q RL E E +Q+ +H + E +L+ E + + +QL SIQI L ++ ++E QA L++K+++L TL EL + +S+ L A S+ + +T S L ++ +SSSAN LT + + Q P ++ +LE + L V +++KQ Y L E+ + ++ E +E EIE+ + +L++ QL ++R +D ++E RL + + D+ + +++L A+E Q S++ ++ + A E Y+ EL HAQ+ L E K + + + L L+ T Q + L + S+W + L + ++ L +++ L +Q+V+L+KL+D S+ S ++ D+ +++YLR++K E + +++RL + + E + L L EER+ V+ ET QHA +M ++E +L ESN LR +RQ +++ E+L L +EPL+ + K + E + L+ RSL ERD W++RC L+E S +++PEE+KQ C +D+LQ + EE R ++ + L+ QI E +L +E++ +S K S + Q + Q K IT+LR+IGRKY+ E++ L ++ +K T+E N LQ L++E+ ++QL+D ES D S +GS + + L I+ Y+ + Q E +SE RMQ+IE L + + + +K QL S + ++ D+ +S E + T S++S G R AA V PV P++ S +S ARQTAEIRP+
Sbjct: 226 ELVSRRTELENAQVTIAKLEDLVKQLTKSNDDHIEKLKLRTDELVNAEQLHTNELEAQRRLTDLYRDQASDVEKKYEEMQKAVTEMQEMLKQGHEHVSKLQSEKTSVVNALAAEKDKLMSENAALARELAAAKEIVDKFRIQGLSEDELRRLNPAVATTIASLKRGRSLTEIYSDYVQVVEERDLLKLDKERLTEHIREMMAQLEEKAPLLRSQQEAFYKSRDRVAELETQLGAALTNAKEKQDVAEDQRRRSSYFQRQNKLLKQSCKDLSIQVKTLLHELETARGTVITSIEEENIQV-----------FPDSSTNDIDSRTLLNLCSADNS-----TAASVIDKNLVTFRSLSELQTQNARLLLVARDLASQLEDHESKKDLLANQVSEITAKVEVLSGEVDVARLAASEARSEANFAARQRDACKALLQRHAIPLPDFSVRNELTPQKC-VDSNTNPHDSAIVLAHL-DRSASALDRTGGSTQMLHQSQTIVKLEETLLSLHAEFKQYREDKARSDEVYTGTIEKLRRESTEARILNQKLAAQLDFTHEKFRTLESNVANYKQEISILREMNARYTTSAAASDEALIALREQSARTGDRLAAAEVECRQLIRQLEHTRANEARLSHELEIAQKTTLMHEHLMHQLQSIQINLEHREEMEARQATRHIEALEAKLEELKKGSEDRQQQLLSLNATLQTELSHTRQALRSAEEEVSQLRAAIAANKPSSPISNTGSSDLQTQA-SSSSANEQLTSADVTSGDGAQLMPTQLR---NLEHECASLRVSLEAVRKQCAEYQHLGIEMETHIAKLTKEREHLEHTH----------ATEIEDASQRCELLSLQLVLEKSER----QDLIHEKTRLTEEYQTSLKKLRDDLASVQLALRDAEERQEAALKLESSAHSEVAAHQKAAQEAREKYETELRLHAQDVQLLTEARKLADEARAEVEGLRAALETTQASLGQSEEQLTAQTSLWEESRARLVKRVEDADAEINRLQEQILTLTEQIVSLRKLMDRSSDQSFSCEESGGQIKESEDFIHLLEYLRRQKSIAEAAEESANAEVSRLHLRTKTLEMQVADLEAKLAEERQRNEVQLETSSQHANLMQQIEQVNLLSESNRLLRQERQMIRDAAVRAEERLTALAREMEPLRTQCKELGDAQEILALEKRSLAEERDRWKERCTRLVETSMRMDPEEYKQACNARDQLQATLKATEEVKAIAERESAARIAALEQQISELSSNLVQRESEGQSFTAKLASLEGQCKIQEDELAKRQVKITKLREIGRKYRQEADELKRQLSNTQEQEKSIKTTEEAIIAVRADLLNAQANLQIEQEQSSMLRQEMDHLQQLIDRVESLPDLDPIKHSPPESL-------------IGSSIPTSSRASVTYNRLNHILSTMIAEFYRMRGQAEE--QSERLLRMQLIESQLAKTKSQCDELKAQLASVMAAASTEAVSTVHSAATTSAEAVDQPISSPETTGNAAVTKSATSTVATGGASWGLRAAATVQPV-------------QTSPPSTASPSPLSSAARQTAEIRPL 1729
BLAST of Translocated promoter region b, nuclear basket protein vs. TrEMBL
Match: A0A5K3FBY2 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.822e-70 Identity = 351/1337 (26.25%), Postives = 624/1337 (46.67%), Query Frame = 2
Query: 617 DFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIR-SDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQ---QEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIG-------VDSPDGSAHLLSPVQDGTGDNNNQTNLN--TISTLNGKVAESQEKIDK----LQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNK--------------------PQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSEN----------RASSS---ANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSL---KKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKA--------KECQLI------SDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSID----FAILQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKS----RVNSELLEELKTQIEEYERSLKDKE-------NQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCK 4381
D EL ++ E++ + ++ KL++ + L N + E L+ + N++ L EL+ Q + +L K++ E E K E A+ E+QE L + E K++ E + + +L + NEL AN + +KFR++ LSE E++ +NPA A I++LKRG S+TQIYS+Y+QVV E++ L++D RL E++ ++ +LE+K PLL+ QQE + ++ L + + L+ + R+ R+ R +Q+ DLS QV L+ E+ET RGTVI+ +D+ +++A F S +++ S + +S S+ A VI +LVT++++ ELQ QN RL+ RDL+ Q E+ E+++ + + ++ K+E E+ + + + + Q+ +AL H S +A G+ S D ++ L+ P G D ++ + L+ +T G ++S K+++ L +E+ + R++K E ++ +I++L + SE ++ N L A++ F EK +LE N+ N + E++ L+ + A E +L Q RL E E +Q+ +H + E +L E +L + ++ QL SIQ L + +++E+++E K+ L + L+ E S + +L + + + I T K+ + RA S A+ ++ T PE + S L SL +KQ Y +L + E+ + + ++ EE+E E+E+ + +L+N QL ++R +D V RL + A L ++ +A +E L S++ ++ + A E Y+ EL H+Q+ L E K+ + +++ L L+ +Q + + + +W E+ ++ + L +++ L +Q VNL+KL++ S+ S A ++ D+ V++YLR++K E + +++RL + E I L L EERR + AET QHA +M ++E +L ESN LR +R+ ++ A+ E+L L +EPL+ + K + E + + RSL ERD W++RC L+E SK+++PEE+KQ C +D+LQ ++L EE R + + L+ Q+ E SL E + SL E Q E + I +LR+IGRKY+ ES+ L ++ T EKE K
Sbjct: 222 DLESELASRKVELEKSQSSVAKLEDLVKRLTESNEDHIEKLKIRTDELVNMEQLHGNELDAQRRLTDLYKDQATEAEKKCEEMQKAVAEMQEMLNQGHEHVIKLQNEKAAFVETLVAEKEKLASQNAMLTNELKVANEIVDKFRIQGLSEEELRQLNPAVATTIASLKRGRSLTQIYSDYVQVVEERDLLKLDNGRLTEHIREMISQLEEKGPLLRSQQEAFYKSKERIAELESQLETALANAKEQHEMANDHSRRSGYYQRQNLRLKQSCKDLSTQVKTLLYELETARGTVIKLTDQGALDA-----------FPDSSTDDTDSRKLLELCSSNNSA-----AASVIDCNLVTYRSLAELQTQNARLLLVARDLATQLEDHESKEDVLA-SRVSEITAKVEVLSGEVQVARLAASEARSEAQFAARQRDAFKALLQKHAIPLPDSAIAEGSTPCKRGPSDATSIDNASLLVHPDTSGVIDVSSVSTLDRTNATTSGGNDSQSAVKLEESLCSLHSELKQYREDKAKSDEVYTETIEKLRKEGSEARILNQKLAAQLDFTHEKFRTLEANVANYKEEISILREMNARYTTSAAASDEALTALREQSACTSDRLAAAEVECRQLTRQLEHARANETRLTQELESAQKLAVTHEQLMRQLQSIQNNLEHREEMERMQASRRIAALETELADLRKSSEEKLE---KMDALNMTLQSELSHARQALRSAEEEACQLRTAIATSKTGPGTPTSSTDGSSPNARAKPSDQLAHAVGDQTSASAETSTCPENQPSLAQFREVERECSFLRVSLEAVRKQFAEYQQLGSEMEAHIASLTREREELEHAH----------AAEVEDKNQQCELLNMQLMLEKSER----QDLVQANARLTDESQAALTKLRADLVAAQAALKDAEARRETALKVEESSRSEVASHQRTAQEAREKYEVELRLHSQDVQLLMEARKRAEEARSEVEGLRTALETAKACAEQSEERSKEQLKLWEEERARFTKRIADADEEVNRLQEQILKLTEQTVNLRKLMERSSDESFPSEELGAQIKASEDFTHVLEYLRRQKSIAEAAEEAANAEVSRLHLRVHSLESRIADLQAQLSEERRESEIRAETSSQHASLMSQIEQVSVLSESNRLLRQERESIRNAAAQAEEQLVALRAEMEPLRIQCKELEDMREILAAEKRSLAEERDRWKERCTRLVETSKRMDPEEYKQACNARDQLQARLLATEEAKASLERESESRIAALEHQMGELSSSLSKLEAERLALATKTASLDEQCRNQQEELSRKQVNIVKLREIGRKYRQESDELRRQL-STTQEKEKSMK 1523
BLAST of Translocated promoter region b, nuclear basket protein vs. TrEMBL
Match: A0A5K3FEG1 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 2.049e-69 Identity = 351/1337 (26.25%), Postives = 624/1337 (46.67%), Query Frame = 2
Query: 617 DFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIR-SDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQ---QEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIG-------VDSPDGSAHLLSPVQDGTGDNNNQTNLN--TISTLNGKVAESQEKIDK----LQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNK--------------------PQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSEN----------RASSS---ANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSL---KKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKA--------KECQLI------SDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSID----FAILQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKS----RVNSELLEELKTQIEEYERSLKDKE-------NQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCK 4381
D EL ++ E++ + ++ KL++ + L N + E L+ + N++ L EL+ Q + +L K++ E E K E A+ E+QE L + E K++ E + + +L + NEL AN + +KFR++ LSE E++ +NPA A I++LKRG S+TQIYS+Y+QVV E++ L++D RL E++ ++ +LE+K PLL+ QQE + ++ L + + L+ + R+ R+ R +Q+ DLS QV L+ E+ET RGTVI+ +D+ +++A F S +++ S + +S S+ A VI +LVT++++ ELQ QN RL+ RDL+ Q E+ E+++ + + ++ K+E E+ + + + + Q+ +AL H S +A G+ S D ++ L+ P G D ++ + L+ +T G ++S K+++ L +E+ + R++K E ++ +I++L + SE ++ N L A++ F EK +LE N+ N + E++ L+ + A E +L Q RL E E +Q+ +H + E +L E +L + ++ QL SIQ L + +++E+++E K+ L + L+ E S + +L + + + I T K+ + RA S A+ ++ T PE + S L SL +KQ Y +L + E+ + + ++ EE+E E+E+ + +L+N QL ++R +D V RL + A L ++ +A +E L S++ ++ + A E Y+ EL H+Q+ L E K+ + +++ L L+ +Q + + + +W E+ ++ + L +++ L +Q VNL+KL++ S+ S A ++ D+ V++YLR++K E + +++RL + E I L L EERR + AET QHA +M ++E +L ESN LR +R+ ++ A+ E+L L +EPL+ + K + E + + RSL ERD W++RC L+E SK+++PEE+KQ C +D+LQ ++L EE R + + L+ Q+ E SL E + SL E Q E + I +LR+IGRKY+ ES+ L ++ T EKE K
Sbjct: 222 DLESELASRKVELEKSQSSVAKLEDLVKRLTESNEDHIEKLKIRTDELVNMEQLHGNELDAQRRLTDLYKDQATEAEKKCEEMQKAVAEMQEMLNQGHEHVIKLQNEKAAFVETLVAEKEKLASQNAMLTNELKVANEIVDKFRIQGLSEEELRQLNPAVATTIASLKRGRSLTQIYSDYVQVVEERDLLKLDNGRLTEHIREMISQLEEKGPLLRSQQEAFYKSKERIAELESQLETALANAKEQHEMANDHSRRSGYYQRQNLRLKQSCKDLSTQVKTLLYELETARGTVIKLTDQGALDA-----------FPDSSTDDTDSRKLLELCSSNNSA-----AASVIDCNLVTYRSLAELQTQNARLLLVARDLATQLEDHESKEDVLA-SRVSEITAKVEVLSGEVQVARLAASEARSEAQFAARQRDAFKALLQKHAIPLPDSAIAEGSTPCKRGPSDATSIDNASLLVHPDTSGVIDVSSVSTLDRTNATTSGGNDSQSAVKLEESLCSLHSELKQYREDKAKSDEVYTETIEKLRKEGSEARILNQKLAAQLDFTHEKFRTLEANVANYKEEISILREMNARYTTSAAASDEALTALREQSACTSDRLAAAEVECRQLTRQLEHARANETRLTQELESAQKLAVTHEQLMRQLQSIQNNLEHREEMERMQASRRIAALETELADLRKSSEEKLE---KMDALNMTLQSELSHARQALRSAEEEACQLRTAIATSKTGPGTPTSSTDGSSPNARAKPSDQLAHAVGDQTSASAETSTCPENQPSLAQFREVERECSFLRVSLEAVRKQFAEYQQLGSEMEAHIASLTREREELEHAH----------AAEVEDKNQQCELLNMQLMLEKSER----QDLVQANARLTDESQAALTKLRADLVAAQAALKDAEARRETALKVEESSRSEVASHQRTAQEAREKYEVELRLHSQDVQLLMEARKRAEEARSEVEGLRTALETAKACAEQSEERSKEQLKLWEEERARFTKRIADADEEVNRLQEQILKLTEQTVNLRKLMERSSDESFPSEELGAQIKASEDFTHVLEYLRRQKSIAEAAEEAANAEVSRLHLRVHSLESRIADLQAQLSEERRESEIRAETSSQHASLMSQIEQVSVLSESNRLLRQERESIRNAAAQAEEQLVALRAEMEPLRIQCKELEDMREILAAEKRSLAEERDRWKERCTRLVETSKRMDPEEYKQACNARDQLQARLLATEEAKASLERESESRIAALEHQMGELSSSLSKLEAERLALATKTASLDEQCRNQQEELSRKQVNIVKLREIGRKYRQESDELRRQL-STTQEKEKSMK 1523
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Cavefish
Match: tprb (translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]) HSP 1 Score: 190.66 bits (483), Expect = 6.566e-48 Identity = 364/1516 (24.01%), Postives = 729/1516 (48.09%), Query Frame = 2
Query: 50 FKSELEAFKVENDNLKRDYDKVTIDYELKIENLKKEMNLKTVNYENLMINFQELDGKYKNSCQEKITVNQNYFD-LSQEKFNIVKKYDXXXXXXXXXXXXXXRREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIK-KLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFE--KFRVKS-----LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGT---------GDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIM----REKHSSS------IKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLA---KKSEENV-SLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIE-------QANEDQIELKSKIKQLTLELKQE--------------KSKYQSSLEMWQAKFSESNAV---IDTLKSQLNSEN--RASSSANLTITESCT-VGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGD-KTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESD---ALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAILQRENDWN---EVIQYLRQEKENVERVKNQFELD-----LNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSEL------LEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESL 4333
++ E F+V+++ D +K + + K +L K ++ L +F +L + K + QEK +++ L EK + K D LE+E L+ + RR +E+ ++ L L E +++ +L ++DLE ++ K EQ +++ + L+ E+K K +E LA S Q + + L+ K +E+ + + LK +L++ + L+ A E Q + + R ELN + ++ L K + E K E A+ EL + LKE E ++++ SG ++++E + +I+ + EL AN L K R S L+E ++ +M+P TAAA+S ++ +T+IY+ Y++ + R++ R+N+Y+ I++E+E KAP+LK+Q+EE + SV+ L K + + ++ Q E +E++++ L R +R E +D+++QV L+ E+E RG + DE +++ SS + ++VI+ HLVTF+++ ELQ QN RL+ R+LS+ QE E + + ++ K LE+A E++ ++E+ QL +++ Q+ D+ +L + A GV P Q GT + T +T G VA S E + ++ + L+ +E+ REK S ++L +SE++ N+ + ++ F ++ L+ N+ + E+A L+ E QK A +KSE+ + +L L + +L E+ + ++ + ++ +E +L+ EK S + + L SIQ L + + E Q ++ + E+ K+L E++Q K + +S ++Q + NA ++TL+ QL+S + RAS +A+ + S + V ++ ++++T ES+ EDL+ S +E Y + + E L Q+ E++ S + ++ E ++ ++E+ L + ++++ ++E QV+EL + L + D L +++L ++E Q + D + Q ++ A + Y++E+I HA + + A + SQ++ Q ++R ++ + + E ++ I E+ +E +L+ Q E L+ ++ ++ ++ +L ++ +S++ ++ + + E+++++R+EKE E ++FE+ ++LR ++ ++E + ++ ++L ER V + T QH E+M + E+ +L+E+N LR +++++++ L + K+ KL I P++ +EL K+ ++ K + LE + W+ R +L+ + K +PEE+K++ EK+ +I + E+ SR+ +E + L++Q++ SL + +SLK+ D + Q+ ITQ++ IGR+YKT+ E L
Sbjct: 39 LRAHHEQFRVDSEQQYFDLEKRCTESQDKFLSLTK-------DHHALKEDFSKLQEELK-ALQEKTKEHESLISKLESEKNQLSKVKDELEAEKRELVRTLERRSQEVESQSEDLNRLNDRLVETNAAKMQLQLKLDDLESSEVSIKYKEKRMEQEKELLQSQLTWLNDELKSKSDELLALSRQKGSE--------ILELKCSLNDKEDEVTRLQDQVASLKASHENLQKQAEDMICKLKEAKEQQASSEEKFRNELNANIKLSNLYKGAAADAEAKSEELNQAVEELHKLLKEAGEAHKALEVKMAEMESGKQKEMTEFKEQISSLEKELENANELLTHTKHRGGSTSAPILTEEQLTTMSP-TAAAVSKIRPDMKLTEIYTAYIESQEHLQLERLENKRVNKYLDDIVQEVEAKAPILKRQREEFERTQKSVANLSAKLEQAVQEVQRLQRETDEANKRASVLERDNRRFETQLADMAQQVRVLLLELEEARGNHVLRDE--------DYL---------------------------SSADVSSTSEVISQHLVTFRSVEELQSQNQRLLVALRELSEAQEKEEMESDSSKRSELQKSLEKAQAELEQLREQRAHQMQLAESIVRQR-------------DMYRVLLAQATGVSFP----------QQGTTPEEFSLTSTPRRSPAVTPTAATPTGLVATSMESTETVEAKAA-LKQLQEVFGAYKREKAESGKVLGEQCEKLQDQVSELRSQNSKISTQLEFASKRYEMLQDNVEGYRKEIASLR----EKTQKQATDVQKSEQTIHTLTQDLRAANEKLTMAESRVESLRKEKDMLKMVESRLSQEKESILSQQRSQNLLLTNLKSIQATLERSETETRQRLTAQVDKQEREISQLQKRLEHEVEQRHLLGRNQDMQLLDAKKQLESQTALYQRTKEQLNAAQQELNTLQQQLSSGDYHRASPTAHTRLQGSNSDVDELRG---RLKQT---ESKAEDLAERVKSTTASVEQYRAMCLSLEEALEKEKQVTEQVRSSVESQVMEAQEQHRQLEKKLLEVEKEKQEIQEEKQKAVTAIEQQVSELRKSLNSLQAEHQDTLQ-KVALAASQEQQALLDSQEQARLAAEAQDKYEREMILHAADVEALQAAKAQALKASQLRQQLEESAQRASAQLL---EARVSWEEQEKILKEEQGKVEARCVDLQKQNELLHEQIQSMSSKMAT--QLQQAASESSLNISLTEEDKSQEQLLEILRFVRREKEIAE---SRFEVAQGETLRHKLRVEHLERE--LKEVQQSLCAERERMQVTSRTLAQHDELMKKTETMNVLVETNKMLREEKEKMEQELQQAQAKITKLESDILPMQESNSELSEKSGMLQAEK---KLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQLTEDTSRLKAEAARSSGSVTTLQSQVQTLRESLGKVTVERDSLKKDIDAKALDLQEKVKTITQVKKIGRRYKTQYEEL 1454
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Cavefish
Match: tprb (translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]) HSP 1 Score: 188.734 bits (478), Expect = 2.647e-47 Identity = 364/1519 (23.96%), Postives = 734/1519 (48.32%), Query Frame = 2
Query: 47 DFKSELEAFKVENDNLKRDYDKVTIDYELK-IENLKKEMNLKTVNYENLMINFQELDGKYKNSCQEKITVNQNYFD-LSQEKFNIVKKYDXXXXXXXXXXXXXXRREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSK--KLSTEIK-KLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS------LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGT---------GDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIM----REKHSSS------IKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLA---KKSEENV-SLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIE-------QANEDQIELKSKIKQLTLELKQE--------------KSKYQSSLEMWQAKFSESNAV---IDTLKSQLNSEN--RASSSANLTITESCT-VGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGD-KTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESD---ALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAILQRENDWN---EVIQYLRQEKENVERVKNQFELD-----LNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSEL------LEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESL 4333
D +++ + + ++ + D ++ D E + E+ K ++L T ++ L +F +L + K + QEK +++ L EK + K D LE+E L+ + RR +E+ ++ L L E +++ +L ++DLE ++ K EQ + LL+S+ L+ E+K K +E LA S Q + + L+ K +E+ + + LK +L++ + L+ A E Q + + R ELN + ++ L K + E K E A+ EL + LKE E ++++ SG ++++E + +I+ + EL AN L + + L+E ++ +M+P TAAA+S ++ +T+IY+ Y++ + R++ R+N+Y+ I++E+E KAP+LK+Q+EE + SV+ L K + + ++ Q E +E++++ L R +R E +D+++QV L+ E+E RG + DE +++ SS + ++VI+ HLVTF+++ ELQ QN RL+ R+LS+ QE E + + ++ K LE+A E++ ++E+ QL +++ Q+ D+ +L + A GV P Q GT + T +T G VA S E + ++ + L+ +E+ REK S ++L +SE++ N+ + ++ F ++ L+ N+ + E+A L+ E QK A +KSE+ + +L L + +L E+ + ++ + ++ +E +L+ EK S + + L SIQ L + + E Q ++ + E+ K+L E++Q K + +S ++Q + NA ++TL+ QL+S + RAS +A+ + S + V ++ ++++T ES+ EDL+ S +E Y + + E L Q+ E++ S + ++ E ++ ++E+ L + ++++ ++E QV+EL + L + D L +++L ++E Q + D + Q ++ A + Y++E+I HA + + A + SQ++ Q ++R ++ + + E ++ I E+ +E +L+ Q E L+ ++ ++ ++ +L ++ +S++ ++ + + E+++++R+EKE E ++FE+ ++LR ++ ++E + ++ ++L ER V + T QH E+M + E+ +L+E+N LR +++++++ L + K+ KL I P++ +EL K+ ++ K + LE + W+ R +L+ + K +PEE+K++ EK+ +I + E+ SR+ +E + L++Q++ SL + +SLK+ D + Q+ ITQ++ IGR+YKT+ E L
Sbjct: 31 DQQTDTDVLRAHHEQFRVDSEQQYFDLEKRCTESQDKFLSL-TKDHHALKEDFSKLQEELK-ALQEKTKEHESLISKLESEKNQLSKVKDELEAEKRELVRTLERRSQEVESQSEDLNRLNDRLVETNAAKMQLQLKLDDLESSEVSIKYKEKRMEQ--EKELLQSQLTWLNDELKSKSDELLALSRQKGSE--------ILELKCSLNDKEDEVTRLQDQVASLKASHENLQKQAEDMICKLKEAKEQQASSEEKFRNELNANIKLSNLYKGAAADAEAKSEELNQAVEELHKLLKEAGEAHKALEVKMAEMESGKQKEMTEFKEQISSLEKELENANELLTHTKHRGGTSAPILTEEQLTTMSP-TAAAVSKIRPDMKLTEIYTAYIESQEHLQLERLENKRVNKYLDDIVQEVEAKAPILKRQREEFERTQKSVANLSAKLEQAVQEVQRLQRETDEANKRASVLERDNRRFETQLADMAQQVRVLLLELEEARGNHVLRDE--------DYL---------------------------SSADVSSTSEVISQHLVTFRSVEELQSQNQRLLVALRELSEAQEKEEMESDSSKRSELQKSLEKAQAELEQLREQRAHQMQLAESIVRQR-------------DMYRVLLAQATGVSFP----------QQGTTPEEFSLTSTPRRSPAVTPTAATPTGLVATSMESTETVEAKAA-LKQLQEVFGAYKREKAESGKVLGEQCEKLQDQVSELRSQNSKISTQLEFASKRYEMLQDNVEGYRKEIASLR----EKTQKQATDVQKSEQTIHTLTQDLRAANEKLTMAESRVESLRKEKDMLKMVESRLSQEKESILSQQRSQNLLLTNLKSIQATLERSETETRQRLTAQVDKQEREISQLQKRLEHEVEQRHLLGRNQDMQLLDAKKQLESQTALYQRTKEQLNAAQQELNTLQQQLSSGDYHRASPTAHTRLQGSNSDVDELRG---RLKQT---ESKAEDLAERVKSTTASVEQYRAMCLSLEEALEKEKQVTEQVRSSVESQVMEAQEQHRQLEKKLLEVEKEKQEIQEEKQKAVTAIEQQVSELRKSLNSLQAEHQDTLQ-KVALAASQEQQALLDSQEQARLAAEAQDKYEREMILHAADVEALQAAKAQALKASQLRQQLEESAQRASAQLL---EARVSWEEQEKILKEEQGKVEARCVDLQKQNELLHEQIQSMSSKMAT--QLQQAASESSLNISLTEEDKSQEQLLEILRFVRREKEIAE---SRFEVAQGETLRHKLRVEHLERE--LKEVQQSLCAERERMQVTSRTLAQHDELMKKTETMNVLVETNKMLREEKEKMEQELQQAQAKITKLESDILPMQESNSELSEKSGMLQAEK---KLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQLTEDTSRLKAEAARSSGSVTTLQSQVQTLRESLGKVTVERDSLKKDIDAKALDLQEKVKTITQVKKIGRRYKTQYEEL 1453
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Cavefish
Match: tprb (translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]) HSP 1 Score: 186.037 bits (471), Expect = 1.852e-46 Identity = 338/1415 (23.89%), Postives = 675/1415 (47.70%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSK--KLSTEIK-KLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS------LSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGT---------GDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIM-----REKHSSS------IKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLA---KKSEENV-SLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIE-------QANEDQIELKSKIKQLTLELKQE--------------KSKYQSSLEMWQAKFSESNAV---IDTLKSQLNSEN--RASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGD-KTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESD---ALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAILQRENDWN---EVIQYLRQEKENVERVKNQFELD-----LNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSEL------LEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESL 4333
RR +E+ ++ L L E +++ +L ++DLE ++ K EQ + LL+S+ L+ E+K K +E LA S Q + + L+ K +E+ + + LK +L++ + L+ A E Q + + R ELN + ++ L K + E K E A+ EL + LKE E ++++ SG ++++E + +I+ + EL AN L + + L+E ++ +M+P TAAA+S ++ +T+IY+ Y++ + R++ R+N+Y+ I++E+E KAP+LK+Q+EE + SV+ L K + + ++ Q E +E++++ L R +R E +D+++QV L+ E+E RG + DE +++ SS + ++VI+ HLVTF+++ ELQ QN RL+ R+LS+ QE E + + ++ K LE+A E++ ++E+ QL +++ Q+ D+ +L + A GV P Q GT + T +T G VA S E + ++ + K+++ REK S ++L +SE++ N+ + ++ F ++ L+ N+ + E+A L+ E QK A +KSE+ + +L L + +L E+ + ++ + ++ +E +L+ EK S + + L SIQ L + + E Q ++ + E+ K+L E++Q K + +S ++Q + NA ++TL+ QL+S + RAS +A+ + G E + ES+ EDL+ S +E Y + + E L Q+ E++ S + ++ E ++ ++E+ L + ++++ ++E QV+EL + L + D L +++L ++E Q + D + Q ++ A + Y++E+I HA + + A + SQ++ Q ++R ++ + + E ++ I E+ +E +L+ Q E L+ ++ ++ ++ +L ++ +S++ ++ + + E+++++R+EKE E ++FE+ ++LR ++ ++E + ++ ++L ER V + T QH E+M + E+ +L+E+N LR +++++++ L + K+ KL I P++ +EL K+ ++ K + LE + W+ R +L+ + K +PEE+K++ EK+ +I + E+ SR+ +E + L++Q++ SL + +SLK+ D + Q+ ITQ++ IGR+YKT+ E L
Sbjct: 120 RRSQEVESQSEDLNRLNDRLVETNAAKMQLQLKLDDLESSEVSIKYKEKRMEQ--EKELLQSQLTWLNDELKSKSDELLALSRQKGSE--------ILELKCSLNDKEDEVTRLQDQVASLKASHENLQKQAEDMICKLKEAKEQQASSEEKFRNELNANIKLSNLYKGAAADAEAKSEELNQAVEELHKLLKEAGEAHKALEVKMAEMESGKQKEMTEFKEQISSLEKELENANELLTHTKHRGGTSAPILTEEQLTTMSP-TAAAVSKIRPDMKLTEIYTAYIESQEHLQLERLENKRVNKYLDDIVQEVEAKAPILKRQREEFERTQKSVANLSAKLEQAVQEVQRLQRETDEANKRASVLERDNRRFETQLADMAQQVRVLLLELEEARGNHVLRDE--------DYL---------------------------SSADVSSTSEVISQHLVTFRSVEELQSQNQRLLVALRELSEAQEKEEMESDSSKRSELQKSLEKAQAELEQLREQRAHQMQLAESIVRQR-------------DMYRVLLAQATGVSFP----------QQGTTPEEFSLTSTPRRSPAVTPTAATPTGLVATSMESTETVEAKAAL----KQVIFGAYKREKAESGKVLGEQCEKLQDQVSELRSQNSKISTQLEFASKRYEMLQDNVEGYRKEIASLR----EKTQKQATDVQKSEQTIHTLTQDLRAANEKLTMAESRVESLRKEKDMLKMVESRLSQEKESILSQQRSQNLLLTNLKSIQATLERSETETRQRLTAQVDKQEREISQLQKRLEHEVEQRHLLGRNQDMQLLDAKKQLESQTALYQRTKEQLNAAQQELNTLQQQLSSGDYHRASPTAHTRLQ-----GSNSDVDELRGRLKQTESKAEDLAERVKSTTASVEQYRAMCLSLEEALEKEKQVTEQVRSSVESQVMEAQEQHRQLEKKLLEVEKEKQEIQEEKQKAVTAIEQQVSELRKSLNSLQAEHQDTLQ-KVALAASQEQQALLDSQEQARLAAEAQDKYEREMILHAADVEALQAAKAQALKASQLRQQLEESAQRASAQLL---EARVSWEEQEKILKEEQGKVEARCVDLQKQNELLHEQIQSMSSKMAT--QLQQAASESSLNISLTEEDKSQEQLLEILRFVRREKEIAE---SRFEVAQGETLRHKLRVEHLERE--LKEVQQSLCAERERMQVTSRTLAQHDELMKKTETMNVLVETNKMLREEKEKMEQELQQAQAKITKLESDILPMQESNSELSEKSGMLQAEK---KLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQLTEDTSRLKAEAARSSGSVTTLQSQVQTLRESLGKVTVERDSLKKDIDAKALDLQEKVKTITQVKKIGRRYKTQYEEL 1438
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Cavefish
Match: tpra (translocated promoter region a, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-081104-2]) HSP 1 Score: 76.2554 bits (186), Expect = 4.033e-13 Identity = 118/482 (24.48%), Postives = 229/482 (47.51%), Query Frame = 2
Query: 602 NKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEAN---ALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGT-VIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGA-IGVDSPDGSAHLLS-PVQDGTGDN 2029
K + L+ K E +K + LK+ L++ + L+ + +T ++ R ELN + + L K + E K A+ EL + LK++ E + + + S + +EL+ +I EL E+N A F++ V +L+E E+ +++P AA +K G + ++Y+ +++ ++ + +++ R+N+ + I+ E+E KAP LK+Q+EE+ ++ S+ +L K + + +++ Q E +E++++ R +R E+ +D+S+QV L+ E+E RG V+R D +++ S ++++V+ V F+++ ELQQQN L+ Q R++ +Q+E +E NE ++ + LE+ KE + +KE+ Q KQL + Q+ + + L G S SG + GS S PV+ D+
Sbjct: 210 GKEILQIKCTLESKNEEASRLQKEVTALKKTSETLQKKTEDLLNKLKEEKDQRTAMEEKYRNELNANLRLCTLYKSSAADAEAKNTELSRAVEELNKLLKDSTEANKTTEKKLSDVESSRGKVETELQEKIKNLQKELEESNKRLAEFKRRGVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVESQDQLQLSKLENKRINKVLDEIVREVETKAPGLKRQKEEYENMQKSMGSLCAKLELAMKEIHKLQKETDEANKRAAVSDRANQRAEKQIADMSQQVRVLLVELEEARGNQVVRED-------------------------------VNSAVS--------SSSEVLGPRQVAFRSVEELQQQNQNLLAQLREMEEQRERSE---NEAKSKELEQSLEKVQKEHELLKEQRNQQKQLADSAMRQRDMYRILLETAGVSLPPQGTDSGTQPATPTRPGSMPTRSTPVRAAAADS 649
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Cavefish
Match: lama5 (laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]) HSP 1 Score: 56.6102 bits (135), Expect = 4.333e-7 Identity = 102/496 (20.56%), Postives = 189/496 (38.10%), Query Frame = 2
Query: 2180 LNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLN-SEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERL----------LGDKTNAFDMLNGEMSLLKAKE-------------CQLISDLER----QRQMTKSATENYQQELIYHAQESDAL-DELNKQMSQ------------IKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLD 3544
LN+S+ + N N + + +++K +LE+ E+ + +D+ EL +K + S + +L + + +E + + +M+ +E N S+ ++ +L ++E+A L ++ PQ +QA+ + S++N ++D +KS++ A+ T TV I+ K ++L+ L +L EA + SE N QL E Q ++N+L +++ E+ + ++ A+ Q+ ND L+D E ERL L +K F + L++ E +ISD + QR + S N +I E+D L E NK ++ +K Q +++ RLQ + DL+ + + E KS E N+ D+ D L +KK LD
Sbjct: 2195 LNKSIENKSINNYN--SSLDGSRDKANTLEK-------ELQTIDSDLFELQEKASLSSRKGATLENN------TIATKERAQNLLDTVKNYMKDIEAAQNGSQTMDEEELKRKLAEVAAMLRDMRFRSTTPQGKQADYE--------------------------------LSQANQLLDRVKSEM---------ADRTAANEATVEEIKNKLNKFH---------QELTSLRDALN---EAANNTALASEKNNANQKQLDEN-----QQKVNDLKKKQKEVTDTMQMAEDDVAQV----NDMLAMLQDSKEEYERLAAQLDGARQPLAEKVQNFSTSGAKSPLVEEAEKHAELLDQLAKNLSSVISDTNQDGFIQRALNASRAYN---NIINSVNEADNLAKEANKSATEALEPKCVLNWTELKPQLQDIKNRLQNATTKKSDLMMDLQKVQNYLNTSQGNTSGEIQAAKSAAEKANSTAADVLDTLDPIKKKLD 2610
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Medaka
Match: tprb (translocated promoter region, nuclear basket protein [Source:NCBI gene;Acc:101172151]) HSP 1 Score: 169.088 bits (427), Expect = 2.507e-41 Identity = 349/1423 (24.53%), Postives = 677/1423 (47.58%), Query Frame = 2
Query: 353 RREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLE-------FRRKDFEQMEQMSLLRSKKLSTEIK-KLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKS------LSETEIKSMNPATAAAISALKRGYSMTQIYSE---------YLQVVNEKEELRVDR---DRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEI-----DRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLA---KKSEENV-SLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQ--IEQANEDQIELKSK-IKQLTLELKQEKSKYQSSLEMWQAKFSESN---AVIDTLKSQLNSE----NRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSV-----------LNYSLKK---QIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAIL--------QRENDWNEVIQYLRQEKENVERVKNQFELDLN-----RLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLK---AELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQI-LIEEEKSRVNSELLEE------LKTQIEEYERSLK---DKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEK 4366
RR E+ + +++++L L E T ++ ++ M++LE ++ K EQ +++ ++ L E+K K EE L+ S Q + + + L+ K++E+ + + LK +L++ N + L+ E Q +++ R ELN + ++ L K ++E K A+ EL + LK+ E + ++ + + + V+EL+ +I + EL AN L +++ L+E ++ +M+P TAAA+S ++ +T+++ + Y V E+L+++R R+N+Y+ +I++E+E KAP+LK+Q+EEH ++ SV++L K + +++ Q+E +ES+++ L R +R E +D+++QV L+ E+E RG + +E ++ + + ++VI+ HLVTF+++ ELQ+QN RL+ R+LSD QE E + ++ ++ ++A E++ +KE+ Q ++ +++ Q+ + + L + + + S +H +P GT L +++ + + E++ + +LQ +RL +K + + ++L + LSE++ NA ++ F ++ L+ N+ + E+A L+ E QK+A +K E+ V +L L + + +L + + ++ + ++ LE +L EK S + + L SIQ L + + + Q QIE + + I QL L+Q E+ Q N V+D LK QL ++ R N+ E T + Q E + L+ EDL L SL+ +E Y + + E L Q+ E+ S + R+ E ++ +EE L+ + + LE LE+++N L++ L + + L +A++ Q + D + Q ++ A + Y++E++ HA + +AL Q SQ L E+LQ LE R S W +++ L+ S+++S+ E L ++ L++QL + L S + + + L + ++ EV++++R+EKE E ++FE+ RLR ++ ++E + ++ +L R V A+T QH E+M + E+ +LME+N LR ++ ++++ L +T K+EKL ++I PL+ +EL K+ ++ K+ LE E W+ R +L+ + K ++PEE+K++ E++ +I + EE +R+ EL L+ QI+ +L ++ N L+ KE+ KNQ +K + ITQ++ IGR+YKT+ + L K+T +K
Sbjct: 102 RRSLEVEHLNDDLKQLNEKLVEANTSKLALQMKMDELETAEVNIKYKEKRMEQEKELLHDQTSWLKEELKAKTEEVLSLSRQKGNE--------ILELKCSLENKQDELNKLQDQVMTLKCSNENLQKQNDDTINKLKETKEQQASMEEKFRNELNANIKLSNLYKGAAADSEAKSVELSRAVEELHKLLKDAGEANKALEEKVQEINIATDKTVNELKEKIQSLEKELDNANELLSNSKLRGAGNRSVLTEEQLITMSP-TAAAVSKIRPNMKLTEVFDKLTSSLFIPLYTAYVETNEQLQLERLENKRINKYLDNIVQEVEAKAPILKRQREEHERMQKSVASLSTKLEQAYKEVHRLQNEADESNKRSSILERDNQRFELQVADMAQQVRVLLVELEEARGNHVVHEEEVMSGD------------------------------------ISSTSEVISQHLVTFRSVEELQKQNQRLLVALRELSDSQEREEFEATSDKRGELEQRFDKAQSELESLKEQRNQQIKMTESIVRQRDMYRMLLAQSTGVSFTQGVPAEEFSLTSTPRRSHAATPT-SGTS-----AALVSMAAESAEALEAKAALRQLQEVFTTYKKERLESDKALTEQN-----EKLQEQLSELRSQNAKTSTQLEFASKRYEMLQDNVEGYRKEIAALR----EKGQKMAADTQKLEQTVNTLQEDLKTAKEKLAMAQAHAENLRKEKDMLKLLESRLTQEKETILNQQQSQNLLLTNLQSIQASLERSETDVRQRLNSQIEKQEREITQLQKRLEQ---------EVEQRHLLSRNQEIQVVD-LKRQLETQVALHQRTKEQINVLEMELSTFRMQQGNIEGLASLQGLDQDREDLQARLKLAETRAEELAESLRAATSSMEQYRAMAQSLEESLNKEKQVTEQARSSIEARMKEAEEQHRALEERLQGMEKEKQDLEDQKRRVVAGLEEEINSLKKSLSSVQEDQQTVLQRLVLSEAQQQQALIDGQEQVKLAAEAQDKYEREMMLHAADVEALQAAKAQASQAVELRHQLEEKLQRV------SAELLEARVS-WEEQEKILKEAVSKVESRNEELQSQNTLLHEQLQTMSTKLADSVQRTANESALNISLTEEGKSQDQLLEVLRFVRREKELAE---SRFEVAQGESLRYRLRMEHLERE--LKEVQDSLSAARERMQVTAKTLAQHDELMKKTETMSILMETNKMLREEKDKMEQELQQTQAKVEKLEKAIMPLQQSNSELSEKSGMLQAEKM---ILEEEIKRWKARTQHLVSQQKDLDPEEYKRLHSEREAHVKRIQQLSEESARLKMELTRTNNLTTGLQGQIQNLRENLSKITEERNMLK--KEVETKNQELLEKART-ITQVKKIGRRYKTQYDEL-----KVTHDK 1431
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Medaka
Match: tpra (nucleoprotein TPR [Source:NCBI gene;Acc:101165590]) HSP 1 Score: 83.9593 bits (206), Expect = 1.911e-15 Identity = 101/423 (23.88%), Postives = 199/423 (47.04%), Query Frame = 2
Query: 1049 VKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSR-KLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEI-DRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQ 2311
V SL+E ++ SM P+ AA + +K +Y+ Y + + + + + R++ + I+ E+E KAP+LK+Q+EE+ ++ S+++L K + + + E R C+EL R KLK E Q D S Q+C L+ E+E RG + +S S G+S + S+ T+ D ++ L T++++ ELQ+QN L+ + RDL ++++ +++ + + ++ +++ KE++ +KE+ Q KQL + Q+ + + T++ + + D P A +P Q QT + + + AE+ D++ NE DRL+ + L+E++ ++A L +++ F+ + L++ L + E+A LQ
Sbjct: 335 VPSLTEDQLNSMCPSAAAIAAIVKPDMKFFDLYNAYAECQTQLQLEKQETKRVSRVLDEIVHEVESKAPVLKRQREEYESMQRSMASLCSKLEQAREIYSLQKEKEEAKQR-CDELERDKLKTERQL-EDASSQLCALLVELEEARG---------------------------------NQVSKSDGSSADISS---TSEDAGSSPL-TYRSVVELQRQNQSLLGRLRDLEEEKDKQQHL--SSRIAELESGVDKLQKEVELLKEQRNQQKQLADSSARQRDMFK--TLLTQSTGFSLPTQDPSPQPDRPSAPATRSTP-QRAAAAEAAQTLSDAFTLYKKEKAEN----DRMLNETNDRLQKQ------------------LTELRSSHAKLTSQLEFSNRRYEMLQETLAAYRREIAALQ 691 HSP 2 Score: 62.003 bits (149), Expect = 9.209e-9 Identity = 108/431 (25.06%), Postives = 206/431 (47.80%), Query Frame = 2
Query: 3203 ISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYL--NNRLVDLNDQLVNLKKLLDPSTVNS----IDFAILQRENDWN---EVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQIL-IEEEKSRVNSELLE------ELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKELQALKKE--IVEIKQLLDESK 4441
I D Q ++ A Y++EL+ HA + +AL +L K Q + R L E L++T L + + L EK+ EN ++++ E NN L D++ +L +D + + E E+++++R+EKE +E + R + + Q+ + +L + L ER + +T Q E + MES L E+N L++DR ++++ L + K+ KL I PL+ L + + +++ D R LE + R R LI + K + EE +++ E++ Q +I + EE +++ +EL +QI+ + S+ ++ ++LK+ + + Q+ + ITQ++ IGR+YKT+ E L ++ +K + QAL ++ I +I++ L ++K
Sbjct: 1003 IQDSLLQTKLAAEAQGKYERELMLHAADVEALQQLKKTSQQHAARIRQLEEELKKTDALLQEKSAALNT------VEKQLKENLANQIRRCDELGKQNNLLHQQMDEMAAKSRLQQQQQQQQQQQQLDLSFSEEEKTTEQILEILRFVRREKEIALAQCEAYEGEALRHKQRVEHQDRELKELQEALNSEREKMQLTTKTLAQQQEQLKRMESINALQETNKMLKMDRNKLEQELQQAQAKVTKLQSDISPLQNSLSLLSEKNSSLQADKRLLEEDLKRCRNRIQQLISQQKTGDSEERQKLTSEREAQQKRISQLVEESAKLKTELARSNAGSNSAHSQIQALKDSMVHLMSERDTLKKDLEAKNNDIQEKNKTITQVKKIGRRYKTQFEELKAQ--------HDKSAQAQALTRQTMIQQIQRELQQAK 1419
BLAST of Translocated promoter region b, nuclear basket protein vs. Planmine SMEST
Match: SMESG000025908.1 (SMESG000025908.1) HSP 1 Score: 3382.42 bits (8769), Expect = 0.000e+0 Identity = 2055/2071 (99.23%), Postives = 2061/2071 (99.52%), Query Frame = 2
Query: 20 MDEPFDINRDFKSELEAFKVENDNLKRDYDKVTIDYELKIENLKKEMNLKTVNYENLMINFQELDGKYKNSCQEKITVNQNYFDLSQEKFNIVKKYDXXXXXXXXXXXXXXRREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLEFRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSXXXXXXXXXXXXXXXXXXFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKYDDNXXXXXXXXXXXXXXHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLAKKSEENVSLASQLGSCQMRLREQETETKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAFDMLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAILQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLXXXXXXXXXXXXTQKQHAEIMLEMESKQMLMESNSKLRLDRQRVXXXXXXXXXXXXXXNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKELQALKKEIVEIKQLLDESKKDCXXXXXXXXXXXXXXXXXNDEFVKKLGSILQCQNSPIDIIETLEKIMKEYQNKIQLLEARESELKFRMQVIEGHLTNLRLENERMKKQLDSRLNMMNSLDDENGTSEENSTEMLPTTSSSSGCHGVPAVARVAANVHPVVQKPQNIVPGXXXXXXXXXXXXXXXCTSTARQTAEIRPIPAVALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTVIFPXXXXXXXXXXXXXXXXXXXXXXVGNXXXXXXXXXXXNRLKRCFDKSIEPDSRTSLIEESANSTFDNSNAIKKCRIRVSXXXXXXXXXXIGGQEALXXXXXXXXXXXXXXXXXGGFIDFDHLXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXNRSKNELEFMFTDMLDGRIHNFSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDDKNESVVEDLKSSENELELAKKKIEPIVWNDHNQRRNNRKDNFTISPSKSTRYSGNAGFRRKMVTSRRNFPFTTTXXXXXXXXXXXXXPFKGSFTPR 6232
MDEPFDINRDFKSELEAFKVENDNLKRDYDKVTIDYELKIENLKKEMNLKTVNYENLMINFQELDGKYKNSCQEKITVNQNYFDLSQEKFNIVKKYDSLESEHTSLLELISRREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLEFRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSINELLKEKIEENELKEENFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKK+DDNLSQLYS QSELEESHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKL KKSEENVSLASQLGSCQMRLREQETE KQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNA D LNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFA+LQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLEEERRFRVVEAETQKQHAEIMLEMESKQMLMESNSKLRLDRQRVKELLAETTEKLEKLNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEE KTQIEEYERSLKDKENQ ESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKELQALKKEIVEIKQLLDESKKDCQQQLSQASTSSNSASQANDEFVKKLGSILQCQNSPIDIIETLEKIMKEYQNKIQLLEARESELKFRMQVIEGHLTNLRLENERMKKQLDSR NMMNSLDDENGTSEENSTEMLPTTSSSSGCHGVPAVARVAANVHPVVQKPQNIVPGSSSNQISPNSQPISSCTSTARQTAEIRPIPAVALHVAPSSSTVDSTTDSVSTASVTTSLPASVVQALAASSSSGPTVIFPAVSSFTPSSSSSSITLAATTGTVGNPISSSSAPPIINRLKRCFDKSIEPDSRTSLIEESANSTFDNSNAIKKCRIRVSD+P+D PVAAIGGQEALV+SQAQQISQQQQQSV+GGFIDFDHLEEDVHEEVVCEAGEVEIESEEVEEVEITEDEDENRSKNELEFMFTDMLDGRIHNFSDQENSVEEEDYDEEEEENEESDENEPEDDEDNLDEDNNDEDDDDDEDDENPDVIDLLSSDDVSEDNDDNNDNKYDDNENNEGDNQESSNYKDDKNESVVED KSSENELELAKKKIEPIVWNDHNQRRNNRKDNFTISPSKSTRYSGNAGFRRKMVTSRRNFPFTTTSGRVLSVGRRSGGPFKGSFTPR
Sbjct: 1 MDEPFDINRDFKSELEAFKVENDNLKRDYDKVTIDYELKIENLKKEMNLKTVNYENLMINFQELDGKYKNSCQEKITVNQNYFDLSQEKFNIVKKYDSLESEHTSLLELISRREKELLYSKNEIQELRTLLTEYKTKEIESKLNMNDLEFRRKDFEQMEQMSLLRSKKLSTEIKKLEEKLAESAQANHNEKTLHNKLVYDFNLELDGKRNEIKNFKKTIEKLKEQISHLERGNVEKNESLRSAVESQTNIDNLLRTELNVQVSINELLKEKIEENELKEENFIGAIRELQESLKETVEESDKMKLEFETKLSGFAQQVSELRMEINRKDNELTEANALFEKFRVKSLSETEIKSMNPATAAAISALKRGYSMTQIYSEYLQVVNEKEELRVDRDRLNEYMLSILEELEQKAPLLKKQQEEHSFLELSVSTLGKKFDDNLSQLYSCQSELEESHRKCEELSRKLKREEQTSSDLSRQVCCLIREVETYRGTVIRSDEMSINANEPEFITRRRSFHQRSLNNSQSHLSISTGTSMESSNRFITANDVITTHLVTFKNICELQQQNIRLIEQFRDLSDQQEATENMINENSMLDMAKKLEQAYKEMDDIKEKHKQNKQLQKTVNAQKHIIQALTMVHGKSDLRSLLASGAIGVDSPDGSAHLLSPVQDGTGDNNNQTNLNTISTLNGKVAESQEKIDKLQNEIDRLRDEKEIMREKHSSSIKELNQSLSEIKLANANLMAKISFNQEKTTSLEQNLINRQMEMADLQNDISELNQKLTKKSEENVSLASQLGSCQMRLREQETEIKQMQFNRQHMESLEEQLNSEKNEKYQLVSSISEMANQLSSIQIYLNKPQIEQANEDQIELKSKIKQLTLELKQEKSKYQSSLEMWQAKFSESNAVIDTLKSQLNSENRASSSANLTITESCTVGVIQTAPEKIEKTGDLESQLEDLSVLNYSLKKQIEAYHELMANSESKLINNSQLIEEMESKFQDRINELTQEKGEIEELLENAQLVNRQLESNFNDREKSLEDQVNELERLLGDKTNAVDRLNGEMSLLKAKECQLISDLERQRQMTKSATENYQQELIYHAQESDALDELNKQMSQIKNQERNLSERLQETIILRDQYKSDLENRDSIWLAEKRALENETSELKSQKEYLNNRLVDLNDQLVNLKKLLDPSTVNSIDFAVLQRENDWNEVIQYLRQEKENVERVKNQFELDLNRLRAQYRQQEETIDQLNKTLEEERRFRVVEAETQKQHAEIMLEMESKQMLMESNSKLRLDRQRVKELLAETTEKLEKLNESIEPLKAELKSKNNEIENVKLDARSLENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQHQILIEEEKSRVNSELLEERKTQIEEYERSLKDKENQFESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESESLSSEIVKITDEKENKCKELQALKKEIVEIKQLLDESKKDCQQQLSQASTSSNSASQANDEFVKKLGSILQCQNSPIDIIETLEKIMKEYQNKIQLLEARESELKFRMQVIEGHLTNLRLENERMKKQLDSRPNMMNSLDDENGTSEENSTEMLPTTSSSSGCHGVPAVARVAANVHPVVQKPQNIVPGSSSNQISPNSQPISSCTSTARQTAEIRPIPAVALHVAPSSSTVDSTTDSVSTASVTTSLPASVVQALAASSSSGPTVIFPAVSSFTPSSSSSSITLAATTGTVGNPISSSSAPPIINRLKRCFDKSIEPDSRTSLIEESANSTFDNSNAIKKCRIRVSDLPEDAPVAAIGGQEALVVSQAQQISQQQQQSVSGGFIDFDHLEEDVHEEVVCEAGEVEIESEEVEEVEITEDEDENRSKNELEFMFTDMLDGRIHNFSDQENSVEEEDYDEEEEENEESDENEPEDDEDNLDEDNNDEDDDDDEDDENPDVIDLLSSDDVSEDNDDNNDNKYDDNENNEGDNQESSNYKDDKNESVVEDQKSSENELELAKKKIEPIVWNDHNQRRNNRKDNFTISPSKSTRYSGNAGFRRKMVTSRRNFPFTTTSGRVLSVGRRSGGPFKGSFTPR 2071
BLAST of Translocated promoter region b, nuclear basket protein vs. Planmine SMEST
Match: SMESG000065719.1 (SMESG000065719.1) HSP 1 Score: 58.151 bits (139), Expect = 8.966e-8 Identity = 38/117 (32.48%), Postives = 75/117 (64.10%), Query Frame = 2
Query: 3992 LENERDLWRKRCDNLIEKSKQVNPEEFKQICIEKDKLQH-----QILIEEEKSRVNSELLEELKTQIEEYERSLKDKENQLESLKEISDKNQAETQKMSSLITQLRDIGRKYKTESE 4327
LE+E++ W++RC L+E+++Q++PE+++ C ++DK + +I ++E K+ ++ E+L+ +I+ E+ L+ E L+E+S+K + ++ QL+DIGRK+K ESE
Sbjct: 1095 LEDEKNRWKERCTKLVERAEQMDPEQYRLACNDRDKYRKLSQELEINLKETKNSDRVKMEEDLQ-KIKNLEKDLEKAELDRRKLEELSNKLTVGER----IVAQLKDIGRKHKGESE 1206 The following BLAST results are available for this feature:
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of Translocated promoter region b, nuclear basket protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Translocated promoter region b, nuclear basket protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Translocated promoter region b, nuclear basket protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Translocated promoter region b, nuclear basket protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016090 ID=SMED30016090|Name=Translocated promoter region b, nuclear basket protein|organism=Schmidtea mediterranea sexual|type=transcript|length=6255bpback to top protein sequence of SMED30016090-orf-1 >SMED30016090-orf-1 ID=SMED30016090-orf-1|Name=SMED30016090-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=2072bp MDEPFDINRDFKSELEAFKVENDNLKRDYDKVTIDYELKIENLKKEMNLKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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