TNF receptor-associated factor
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016053 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF6 (TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]) HSP 1 Score: 103.219 bits (256), Expect = 1.147e-22 Identity = 111/434 (25.58%), Postives = 180/434 (41.47%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHI-----ENLHSNMELVTTSERK----------SET-NWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 +S +EI G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP + C K EL + +H C + M CP C++ + + H I I+K +N + KE + + I + I I N+Y + + + RNH+ EN S+M ++ + SE N++E I++L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ +I C G Y W I N + E+ V I+ FY+ K GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ Sbjct: 47 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQ----CQRPFQ-----KFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANV--------ICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSVIPDSGYISEVRNFQETIHQLEGRLVRQDHQIRELTAK-----------METQSMYVSELK----RTIRTLEDKVAEIEAQQCN--GIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 436
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF6 (TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]) HSP 1 Score: 103.219 bits (256), Expect = 1.147e-22 Identity = 111/434 (25.58%), Postives = 180/434 (41.47%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHI-----ENLHSNMELVTTSERK----------SET-NWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 +S +EI G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP + C K EL + +H C + M CP C++ + + H I I+K +N + KE + + I + I I N+Y + + + RNH+ EN S+M ++ + SE N++E I++L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ +I C G Y W I N + E+ V I+ FY+ K GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ Sbjct: 47 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQ----CQRPFQ-----KFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANV--------ICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSVIPDSGYISEVRNFQETIHQLEGRLVRQDHQIRELTAK-----------METQSMYVSELK----RTIRTLEDKVAEIEAQQCN--GIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 436
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 95.5153 bits (236), Expect = 4.325e-20 Identity = 94/383 (24.54%), Postives = 167/383 (43.60%), Query Frame = 3 Query: 285 CQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDEL-IKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEG--KVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 C++Q+ I + H D + ++V CP K C+ + L ++ H+ C C + R GC TN+ I+ H ++H LL E+ +L+ ++ L+ E +I+ L +I + +IEI R + +N+S+I L I S A + L I R NW+E + +K + L + E+E K RN +E S H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ S + + + N +K+P E N Sbjct: 180 CKSQVPMIALQKHED----TDCPCVVVSCPHK-CSVQTLLRSELSAHLSECVNAPSTCSFKRYGC-VFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-------CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI--------------RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD--QGSSRRHLGDAFKPDPNSSSFKKPTGEMN 529
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 95.5153 bits (236), Expect = 4.325e-20 Identity = 94/383 (24.54%), Postives = 167/383 (43.60%), Query Frame = 3 Query: 285 CQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDEL-IKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEG--KVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 C++Q+ I + H D + ++V CP K C+ + L ++ H+ C C + R GC TN+ I+ H ++H LL E+ +L+ ++ L+ E +I+ L +I + +IEI R + +N+S+I L I S A + L I R NW+E + +K + L + E+E K RN +E S H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ S + + + N +K+P E N Sbjct: 180 CKSQVPMIALQKHED----TDCPCVVVSCPHK-CSVQTLLRSELSAHLSECVNAPSTCSFKRYGC-VFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-------CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI--------------RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD--QGSSRRHLGDAFKPDPNSSSFKKPTGEMN 529
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 84.7297 bits (208), Expect = 1.344e-16 Identity = 101/454 (22.25%), Postives = 184/454 (40.53%), Query Frame = 3 Query: 159 CTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHI-RVCNYR-----HMK---------------CPYSRIGCK---------QSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEG--KVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 CT C++ ++ + + C + + I+C N+ C Q++ ++ +H N+ + C C K + +H+ + C YR H K CP + C +S TN+ I+ H ++H LL E+ +L+ ++ L+ E +I+ L +I + +IEI R + +N+S+I L I S A + L I R NW+E + +K + L + E+E K RN +E S H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ S + + + N +K+P E N Sbjct: 88 CTACQESIVKDKV------FKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHL----KNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-------CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI--------------RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD--QGSSRRHLGDAFKPDPNSSSFKKPTGEMN 504
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-1 (TNF Receptor Associated Factor (TRAF) homolog; TRF-1 [Source:UniProtKB/TrEMBL;Acc:G5EG80]) HSP 1 Score: 51.6026 bits (122), Expect = 1.186e-6 Identity = 39/146 (26.71%), Postives = 60/146 (41.10%), Query Frame = 3 Query: 1062 EKFG-EYEWNIKNVSQLE------RNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELIN----PHNQSLFKSILIKYFDFSNDKKWKRPKKERNDPIYKNELVTLNEFSRSLKHDQ 1448 E FG + W I + Q + I+ F SH++GYKM L AG + L++GEFD L WPF I L++ P ++ ++ +N+K RP+ ERN +L +K D+ Sbjct: 259 EMFGPQLIWKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLYVLLLKGEFDPTLEWPFHRAIKISLLDQNPRPEDRVNITYVIDPRKLKANEKFLARPRGERNAAFGSQSFCSLAILQNYVKDDK 404
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-2 (TNF Receptor Associated Factor (TRAF) homolog [Source:UniProtKB/TrEMBL;Acc:Q9N586]) HSP 1 Score: 49.6766 bits (117), Expect = 3.128e-6 Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 3 Query: 1122 NIYGEAFYSHKYGYKM-CLSIKLG---AY--WILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 +IY + FYSH YGYKM ++ G A+ + +CLM+GE+D L WPF+ T +++ Sbjct: 182 SIYSQPFYSHGYGYKMMAVAAPYGDGLAFREYFSVFVCLMKGEWDDILEWPFRCDVTFSILS 243
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf6 (gene:FBgn0265464 transcript:FBtr0071188) HSP 1 Score: 61.2326 bits (147), Expect = 1.488e-9 Identity = 45/168 (26.79%), Postives = 76/168 (45.24%), Query Frame = 3 Query: 159 CTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKS--CNFKDELIKIGNHIRVCNYRHM------KCPYSRIGCK--QSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRK-EFSGSKSTIE 629 C IC D + + CG ++C C+ + ++N CP D N+ + ++ D T I +L CP S C+ I++ H+ C YR KCP+++I C TN+ + EH D+ H +L+L+ + Q I T + + S S + +E Sbjct: 104 CAICIDWLNEPVLTSCGHRFCRSCLTAWMQKNNQCCPMD-----NKRLSAEHDIFPDNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEKCPFAKIKCDFVGRPETNQ-LEEHLKADMPHHMQLMLQAFQ--QTAIATWQPHKPSTSGAAVE 263
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 82.8037 bits (203), Expect = 3.229e-16 Identity = 93/429 (21.68%), Postives = 170/429 (39.63%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCP-------------YSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQN--EIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN---LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYN----CEKF-GEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAY-------WILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 + Y F+ +++ C IC + +A PCG ++C CI K + + CP D N+++ + L D I L VKC C+ K EL ++ H+ C + CP + C Q T F+ + ++ E + + E+E +R + + L + + LK + C + N+ H M + LR+ N + S +++ +R + + + KQ L+ L E+EG++ R + + H + K Q+ +L+ KLV + +++ G Y W ++N S RN + ++ FY+ + GYK+CL + L +I + M+GEFDS L+WP Q + +++ Sbjct: 55 QGYDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVD-----NEVL-LEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLA--------LHCDTDCLK-APVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRL----VRQDQQIRELCIHNDTQK----NQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLD 460
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 82.8037 bits (203), Expect = 3.229e-16 Identity = 93/429 (21.68%), Postives = 170/429 (39.63%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCP-------------YSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQN--EIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN---LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYN----CEKF-GEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAY-------WILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 + Y F+ +++ C IC + +A PCG ++C CI K + + CP D N+++ + L D I L VKC C+ K EL ++ H+ C + CP + C Q T F+ + ++ E + + E+E +R + + L + + LK + C + N+ H M + LR+ N + S +++ +R + + + KQ L+ L E+EG++ R + + H + K Q+ +L+ KLV + +++ G Y W ++N S RN + ++ FY+ + GYK+CL + L +I + M+GEFDS L+WP Q + +++ Sbjct: 55 QGYDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVD-----NEVL-LEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLA--------LHCDTDCLK-APVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRL----VRQDQQIRELCIHNDTQK----NQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLD 460
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 82.8037 bits (203), Expect = 3.229e-16 Identity = 93/429 (21.68%), Postives = 170/429 (39.63%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCP-------------YSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQN--EIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN---LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYN----CEKF-GEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAY-------WILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 + Y F+ +++ C IC + +A PCG ++C CI K + + CP D N+++ + L D I L VKC C+ K EL ++ H+ C + CP + C Q T F+ + ++ E + + E+E +R + + L + + LK + C + N+ H M + LR+ N + S +++ +R + + + KQ L+ L E+EG++ R + + H + K Q+ +L+ KLV + +++ G Y W ++N S RN + ++ FY+ + GYK+CL + L +I + M+GEFDS L+WP Q + +++ Sbjct: 55 QGYDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVD-----NEVL-LEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLA--------LHCDTDCLK-APVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRL----VRQDQQIRELCIHNDTQK----NQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLD 460
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf2a (Tnf receptor-associated factor 2a [Source:ZFIN;Acc:ZDB-GENE-071120-2]) HSP 1 Score: 70.0922 bits (170), Expect = 3.644e-12 Identity = 79/350 (22.57%), Postives = 143/350 (40.86%), Query Frame = 3 Query: 417 NHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSE--IHCLNHEIMSLATENGLLRNHIE-----NLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSE--HGEEMKVEIYKQIRDL-------KLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 +HI++C C + +GC + E I +H +H LLL +I ++ +E+L+ + ++E +I L S ++++ +L S Q + +L T L + LHS V R+ + ++N + + L+ E E E +NR + E + + ++E +RDL K++ + Y+ G + W I + S+ R ++ AFY+ KYGYKMCL I L G +MRG D+ L WPF T+ L++ +N+ + I+ + + ++RP + N Sbjct: 204 DHIKLCTKFRTPCRFHVVGCDMT-VEKEKIHDHEQACSYEHLNLLLHFIMGIKVNLESLQPQ------SLELASHKIHELHQSLRELELKMGQLCGAGASVQGACALPPPPPPAPTLGTSFTPLPTAVGAALELQLHSEKTKVVELSRRCQELELKVNTFENIVCVLNRE-MERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEAKMREMSAATYD----GVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNR---EHIIDAFRPDISSSSFQRPVSDMN 538
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf3 (TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]) HSP 1 Score: 63.929 bits (154), Expect = 2.921e-10 Identity = 80/368 (21.74%), Postives = 147/368 (39.95%), Query Frame = 3 Query: 363 VKCPEKSCNFKDEL-IKIGNHIRVCNYRHMKCPYSRIGCKQSYTT-NESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEF----------SGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLAT---ENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDF-SNDKKWKRPKKERN 1382 V CP C+F L ++ +H C + C + R GC SY N+ +REH +H ++ L+ ++E ++ E S + +ER +E+ + + L ++ E+ E+ L E LR +E++ S + + +S S + + L+Q+L R+ + M EM DLKL++++ +N G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L+ +Q + L F + ++RP E N Sbjct: 204 VACPNH-CSFSSILRSELSSHQHDCPKAQVTCSFIRYGC--SYKGLNQEMREHESSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEVERQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRAMREEVETLRGSVESMRSMVSSLDSSCVNSASGSHTLASLEQQL------------------TRHDDLMSVHDVRLAEM---------DLKLQVLETASFN----GTLIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTLMLM---DQGPARKHLGDAFKPDPSSSSFRRPTGEMN 534
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 82.4185 bits (202), Expect = 5.792e-16 Identity = 108/497 (21.73%), Postives = 191/497 (38.43%), Query Frame = 3 Query: 117 YKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLN---------EDNI--------------------FCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHI-RVCNYRHMKCPYSR--------------------IGCK---------QSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELIN--PHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 YK F V+ C C+ ++ N CG ++C C+ L+ EDNI FC N+ C+ I N+ +H ++ +L CP C K + +HI + C YR C + R I C +S TN+ I+ H ++H L+ E+ L+ ++ L+ E S + I+IL + +IEI R + +N++ I L I A + L I NL + E + +K L + ++E + + N +E + H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ ++ L++ P + L + + N +K+P E N Sbjct: 34 YKERFLKPVEEKYKCEKCRLVLCNPRQTECGHRFCETCMNAILSSTSPQCMACEDNITKDKVFKDNCCRREVLALQMFCRNETRGCKELITLGNLLIHLK--SDCQFEEL--SCPRADCKEKVIRKDLSDHIEKTCKYRETPCKFCRNQVPLVEMQKHEDVDCPSVVISCPHMCSVKSLLRSEGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKS-------IQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGD--------------EADGMKSNYESLQNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDA----FKPDPNSSSFKKPTGEMN 497
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 82.4185 bits (202), Expect = 6.019e-16 Identity = 86/383 (22.45%), Postives = 162/383 (42.30%), Query Frame = 3 Query: 285 CQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDEL-IKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELIN--PHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 C+NQ+ + + H D + +++ CP C+ K L ++ H+ C C + R GC TN+ I+ H ++H L+ E+ L+ ++ L+ E S +I+ IL + +IEI R + +N++ I L I A + L I NL + E + +K L + ++E + + N +E + H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ ++ L++ P + L + + N +K+P E N Sbjct: 175 CRNQVPLVEMQKHEDV----DCPSVVISCPHM-CSVKSLLRSELNAHLLECVNAPSTCSFKRYGCTFK-GTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQ-------ILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGD--------------EADGMKSNYESLQNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDA----FKPDPNSSSFKKPTGEMN 522
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: egf (epidermal growth factor [Source:Xenbase;Acc:XB-GENE-951823]) HSP 1 Score: 79.7221 bits (195), Expect = 4.756e-15 Identity = 102/461 (22.13%), Postives = 180/461 (39.05%), Query Frame = 3 Query: 108 LKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMK----------------------------------------------CPYSRIGCK--QSYTTNESIREHFLIDIIKHSELLLEY----IENLQ-NEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQL------ERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 ++ Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+ + N L D I L VKCP + C EL + H+ C++ ++ CP + + C+ Q+ E + H+ +D + Y E +Q N++ +EF+ ++ + + Q + S + + D ++ + S+ S+AT + + H+ + T E + N +E I +L+ RL+ DH+ +E+ K ME + E+K IR L +L ++ C G + W I N + L ER V I+ + FY+ K GYK+CL + L A +I + M+GE+DS L WP Q + +++ Sbjct: 55 VQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVD-----NESLMEN-QLFPDNFAKREILSLRVKCPSQGCTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHKFEECPRRQIFCENCALAMALEDKLNHDQTCPLAYVTCEYCQTNLIREQMPAHYSMDCTMAPIPCMYYEFGCTEKMQRNDLARHLQEFT--QAHMRMMAQTLRSFSSSVTP----TSHMPDISFCDPSQ---FEPAPPSVAT--------VHSSHTPSQNDCTQETR---NLRETIEQLEGRLVRQDHQIRELIAK-----------METQCTYVNELK----HTIRSLDNRLGEMESQQCS--GIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILD 472
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: hspb6 (heat shock protein family B (small) member 6 [Source:Xenbase;Acc:XB-GENE-876273]) HSP 1 Score: 61.2326 bits (147), Expect = 2.142e-9 Identity = 34/116 (29.31%), Postives = 57/116 (49.14%), Query Frame = 3 Query: 1071 GEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 G + W I +++ R +++Y AFY+ KYGYK+CL I L G +M+GE+D+ L WPF+H T L++ +N+ S+ + ++RP + N Sbjct: 230 GVFLWKISDLTNKSHDAVTGRAISLYSPAFYTAKYGYKVCLRIYLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTFVLVDHNNRD---SVFDAFRPDVTSASFQRPINDMN 342
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: TRAF2 (TNF receptor associated factor 2 [Source:NCBI gene;Acc:100494415]) HSP 1 Score: 58.5362 bits (140), Expect = 1.912e-8 Identity = 108/472 (22.88%), Postives = 177/472 (37.50%), Query Frame = 3 Query: 120 KFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHL-----NEDNIF-CPN--DVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHI----RVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSE-IHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEM---------KVE-IYKQIRDLKLKLVQ----------------IGVYNCEKFGEYEWNIKNVSQLERNV------NIYGEAFYSHKYGYKMCLSIKLGA------YWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 K I +++ LC+ CK+++ CG +YC C+ K + N + CP + + +I + YL + CP +C +I+ N R C R + C Y CK S+ + DI H E+ ++ + E G K I R K + + S+N R + E CL HE SLA + ++I+ H E S R + + LD +N E V V NR +ERSS EE+ KVE + ++R L+ L Q + Y+ G + W I + ++ ++ FY++KYGYKMCL I L + +M+G D+ L WPF T+ L++ +N+ + ++ + + ++RP E N Sbjct: 24 KEILGTKLEVKYLCSDCKNLLRRPLQAQCGHRYCSHCLNKIIRWVARNWGGVPECPAVCERSDWTGALISVGHEGKCPYL--------LAPCP--ACK---TIIRAANRDLHSERECPERKLNCRY----CKLSF---------YFPDIKAHDEICPKF---------PMTCEGCGRKK-IPREKVRLFVCSFSRNITLSLPCRYAAVGCTEMVENDKCLEHENKSLAEHLAKVWDYIQ--HGRKEQNDLSVRMGSLSVQ--GSPAPPFDTLDKKNTTFENIVS-VLNRE---VERSSHAAEELARQLRAAQEKVEALTTKVRQLERTLGQKELIVAELETRMQESELSTYD----GVFIWKISEFGKKRQDAINGRCPAMFSPPFYTNKYGYKMCLRIYLNGDGTGRNTHLSLFFVVMKGNNDALLRWPFNQKVTLMLLDQNNR---EHVIDAFRPDVSSSSFQRPISEMN 444
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf6 (TNF receptor-associated factor 6 [Source:MGI Symbol;Acc:MGI:108072]) HSP 1 Score: 99.3673 bits (246), Expect = 1.407e-21 Identity = 110/466 (23.61%), Postives = 196/466 (42.06%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHS------ELLLEY----IENLQNEIETLRKEFSGSKSTIERLKQEIEI-LKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSE-----RKSETNWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSND-KKWKRPKKERN 1382 +S +EI G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L VKCP K C K EL + +H C + + CP C++ + + + H + D + + + Y I + + + E+ G+ E++ ++ + C + ++ N H H + LL + N++ + + R + N++E I +L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ ++ C G Y W I N + ER V I+ FY+ + GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ +++L + + D + ++RP RN Sbjct: 47 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLTVKCPNKGCLQKMELRHLEDHQVHCEFALVNCPQ----CQRPFQKCQ-VNTHIIEDCPRRQVSCVNCAVSMAYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAPIPCTFSVFGCHEKMQRN----HLARHLQENTQLHMRLLAQAVHNVNLALRPCDAASPSRGCRPEDPNYEETIKQLESRLVRQDHQIRELTAK-----------METQSMYVGELK----RTIRTLEDKVAEMEAQQCN--GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEALIRQNHEEVMDAKPELLAFQRPTIPRN 475
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 95.1301 bits (235), Expect = 4.453e-20 Identity = 94/383 (24.54%), Postives = 167/383 (43.60%), Query Frame = 3 Query: 285 CQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDEL-IKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEG--KVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 C++Q+ I + H D + ++V CP K C+ + L ++ H+ C C + R GC TN+ I+ H ++H LL E+ +L+ ++ L+ E +I+ L +I + +IEI R + +N+S+I L I S A + L I R NW+E + +K + L + E+E K RN +E S H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ S + + + N +K+P E N Sbjct: 179 CKSQVPMIKLQKHED----TDCPCVVVSCPHK-CSVQTLLRSELSAHLSECVNAPSTCSFKRYGC-VFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-------CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI--------------RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD--QGSSRRHLGDAFKPDPNSSSFKKPTGEMN 528
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 84.7297 bits (208), Expect = 8.802e-17 Identity = 110/497 (22.13%), Postives = 193/497 (38.83%), Query Frame = 3 Query: 117 YKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLN-------------------EDN----------IFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHI-RVCNYR-----HMK---------------CPYSRIGCK---------QSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEG--KVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 YK F V+ C C+ ++ N CG ++C C+ L+ +DN ++C N+ C Q+ ++ +H N + C C K + +H+ + C YR H K CP + C +S TN+ I+ H ++H LL E+ +L+ ++ L+ E +I+ L +I + +IEI R + +N+S+I L I S A + L I R NW+E + +K + L + E+E K RN +E S H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ S + + + N +K+P E N Sbjct: 38 YKEKFVKTVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTACQESIIKDKVFKDNCCKREILALQVYCRNEGRGCAEQLTLGHLLVHL----KNECQFEELPCLRADCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIKLQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-------CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI--------------RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD--QGSSRRHLGDAFKPDPNSSSFKKPTGEMN 503
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 84.7297 bits (208), Expect = 8.802e-17 Identity = 110/497 (22.13%), Postives = 193/497 (38.83%), Query Frame = 3 Query: 117 YKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLN-------------------EDN----------IFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHI-RVCNYR-----HMK---------------CPYSRIGCK---------QSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEG--KVQEVFNRNAEWMERS-SEHGEEMKV-EIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 YK F V+ C C+ ++ N CG ++C C+ L+ +DN ++C N+ C Q+ ++ +H N + C C K + +H+ + C YR H K CP + C +S TN+ I+ H ++H LL E+ +L+ ++ L+ E +I+ L +I + +IEI R + +N+S+I L I S A + L I R NW+E + +K + L + E+E K RN +E S H + + V +I DL+ ++++ YN G W I++ + + + +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ S + + + N +K+P E N Sbjct: 38 YKEKFVKTVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTACQESIIKDKVFKDNCCKREILALQVYCRNEGRGCAEQLTLGHLLVHL----KNECQFEELPCLRADCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIKLQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-------CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI--------------RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD--QGSSRRHLGDAFKPDPNSSSFKKPTGEMN 503
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf1 (TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]) HSP 1 Score: 63.929 bits (154), Expect = 2.233e-10 Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 1071 GEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGA------YWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 G + W I NV++ R V+++ AFY+ KYGYK+CL + L + + +MRGE+D+ L WPF++ T L++ +N+ +I D S+ ++RP+ E N Sbjct: 260 GTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNRE--HAIDAFRPDLSS-ASFQRPQSETN 372
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q9Y4K3|TRAF6_HUMAN (TNF receptor-associated factor 6 OS=Homo sapiens OX=9606 GN=TRAF6 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.506e-22 Identity = 111/434 (25.58%), Postives = 180/434 (41.47%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHI-----ENLHSNMELVTTSERK----------SET-NWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 +S +EI G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP + C K EL + +H C + M CP C++ + + H I I+K +N + KE + + I + I I N+Y + + + RNH+ EN S+M ++ + SE N++E I++L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ +I C G Y W I N + E+ V I+ FY+ K GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ Sbjct: 47 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQ----CQRPFQ-----KFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANV--------ICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSVIPDSGYISEVRNFQETIHQLEGRLVRQDHQIRELTAK-----------METQSMYVSELK----RTIRTLEDKVAEIEAQQCN--GIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 436
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B5DF45|TRAF6_RAT (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.431e-22 Identity = 106/434 (24.42%), Postives = 180/434 (41.47%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHS------ELLLEY----IENLQNEIETLRKEFSGSKSTIERLKQEIEI-LKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSE-----RKSETNWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 +S +EI G Y F+ +++ C IC + A PCG ++C CI K + + CP D N+I+ N L D I L VKCP K C K EL + +H C + + CP Q + I +H + D + + + Y I + + + E+ G+ E++ ++ + C + ++ N H H + LL + N++ ++ S R + N++E + +L+ RL+ DH+ +E+ K ME S H E+K + IR L+ K+ ++ C G Y W I N + ER V I+ FY+ + GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ Sbjct: 47 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQC-----QRFFQKCQINKHIIEDCPRRQVSCVNCAVPMPYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAPVPCTFSVFGCHEKMQRN----HLARHLQENTQLHMRLLAQAVHNVNLSLRPCDASSPSRGCRPEDPNYEETVKQLEGRLVRQDHQIRELTAK-----------METQSMHVSELK----RTIRSLEDKVAEMEAQQCN--GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 444
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B6CJY4|TRAF6_CERAT (TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.045e-21 Identity = 118/466 (25.32%), Postives = 193/466 (41.42%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHI-----ENLHSNM----------ELVTTSERKSET-NWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSND-KKWKRPKKERN 1382 +S +EI G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP + C K EL + +H C + + CP C++ + + H I I+K +N + KE + + I + I I N+Y + + + RNH+ EN S+M L+ S SE N++E I++L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ +I C G Y W I N + E+ V I+ FY+ K GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ +++ + + D D ++RP RN Sbjct: 47 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQ----CQRPFQ-----KFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANV--------ICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYVSEVRNFQETIHQLEGRLVRQDHQIRELTAK-----------METQSTYVSELK----RTIRTLEDKVAEIEAQQCN--GIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPDLLAFQRPTIPRN 467
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B6CJY5|TRAF6_MACMU (TNF receptor-associated factor 6 OS=Macaca mulatta OX=9544 GN=TRAF6 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.436e-21 Identity = 117/466 (25.11%), Postives = 193/466 (41.42%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHI-----ENLHSNM----------ELVTTSERKSET-NWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSND-KKWKRPKKERN 1382 +S ++I G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP + C K EL + +H C + + CP C++ + + H I I+K +N + KE + + I + I I N+Y + + + RNH+ EN S+M L+ S SE N++E I++L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ +I C G Y W I N + E+ V I+ FY+ K GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ +++ + + D D ++RP RN Sbjct: 47 SSFMEDIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQ----CQRPFQ-----KFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANV--------ICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYVSEVRNFQETIHQLEGRLVRQDHQIRELTAK-----------METQSTYVSELK----RTIRTLEDKVAEIEAQQCN--GIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPDLLAFQRPTIPRN 467
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q3ZCC3|TRAF6_BOVIN (TNF receptor-associated factor 6 OS=Bos taurus OX=9913 GN=TRAF6 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.766e-21 Identity = 114/461 (24.73%), Postives = 185/461 (40.13%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEI----LKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENG----LLRNHI-----ENLHSNMELVT-----------------------------TSERKSET-NWKE-INKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVS------QLERNVNIYGEAFYSHKYGYKMCLSIKLG-------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 +S +EI G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP + C K EL + H C + M CP C++ + + H I I+K E R++ + ++ EI ++ C+ L N ++ C + + G + RNH+ EN S+M ++ +S R SE N++E I +L+ RL+ DH+ +E+ K ME S + E+K + IR L+ K+ +I C G Y W I N + E+ V I+ FY+ K GYK+C+ + L A +I + M+GE+DS+L WPFQ + +++ Sbjct: 48 SSFMEEIQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQ----CQRPFQ-----KCHLNIHILK----------------ECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAK-----------METQSMYVNELK----RTIRTLEDKVAEIEAQQCN--GIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 456
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1E101 (TRAF-6 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.577e-36 Identity = 119/457 (26.04%), Postives = 220/457 (48.14%), Query Frame = 3 Query: 81 SLFDEIYGLLKKYKF-IFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEI----ETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQS-EIHCLNHEIMSLATEN-----------GLLRNHIENLHSNMELVTTSERKSETN--WKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFG-EYEWNIKNVSQLERNV-NIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKK-WKRPKKERND 1385 S D + LL KY + V DLLC +C +M +A CGC YC CI +L++++ +CP D EC+ +++ ++ + + IS+++VKCP CN+ EL+++ H+ C ++CP IGC++ + + +H +++H++L++ + L++EI ET +++ S K + R+++ + K ++ IE R DN S +I + +E+++L T + R IE + +++E+V +++ K++ KEI +K M +D N+E E K+ + N KL C ++ W I+ S+ R V ++Y ++F SH YK CL++ + + +M+GE D +L WP + T+ +I + K+ + +Y + +KK + RPK ERND Sbjct: 4 SKLDNVQELLSKYNVKRVDESVNNDLLCILCNKLMRDACESACGCHYCYTCIRIYLSQNHNYCPGDKTECKEDYLNLEGDVFRNIRLSTRISRIVVKCPNIRCNYTSELLRLKEHLDKCTPESVECPCVTIGCEEEPLLKDEMAKHLTDQVLRHTQLIMSFCNELKSEINHNNETTKEDISHLKEVL-RVQKALNDEKTAQMEFLIEELRNKDNMILVLSQDIQEVKNEMITLLTSKESELKKLKSDIQIFRQEIEFMKNDLEVVGSTDIKNQVKDLKKEIFGIK---MNIDSNNEERERKMNNLIRLN---------------------------KL-------CPNVDMDFMWRIEEYSKKRRTVTDVYSDSFQSH--NYKFCLNLYIYGDNLGLWCVIMKGEKDDFLEWPMRRTVTLSIIEQDSLKTHKTTVFQYDTYQRNKKAFDRPKDERND 420
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: I1ZID8 (TNF receptor associated factor-2 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.403e-28 Identity = 61/190 (32.11%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 90 DEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILK 659 ++I LL Y F V +L C +CK++++NA CGC++C +CIM++++ N++CP EC+ + + I N+H DY N I+K+ VKCPE++C EL+ I H+R+C + CP+ +GC Q + + H +HS+L+++ I N++N +F G + L+++I ++K Sbjct: 4 EKINRLLITYNFEVEGGVPDNLKCDLCKNLLVNACQSRCGCRFCSKCIMEYVSRGNLYCPGGTSECKEENLTICSNIHTDYRVNRKIAKMRVKCPEETCKVYCELVDIEEHLRLCTMKSQNCPFFVLGCNQPKMVIQDLTNHLQNGTFQHSKLIIDIISNMRN-------DFFGLTTKEVELREDINLIK 186
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A0F7GWW3 (TNF receptor associated factor 4 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.816e-23 Identity = 57/152 (37.50%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 306 ININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSL 761 +N N+ DY N I+KL VKC EKSC++ DEL K+ +H R C YR + CPYS IGC + + + + +H +I H++LL++++ N NE+E L+ +G E L+ EI LK+ + ++EI L + EI LN +I +L Sbjct: 12 LNENICVDYPMNMKIAKLQVKCKEKSCDYVDELRKMEDHSRTCKYRSVACPYSNIGCDKCNISQDKVTDHLQSEIFVHTKLLMDFVVNFNNEMEMLKANNNGLSPVNELLRNEINELKLDGDRRRVEIGDLQRKCANQAEEIELLNEDIPAL 163
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A3M0JGK1 (Uncharacterized protein OS=Hirundo rustica rustica OX=333673 GN=DUI87_22875 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.822e-22 Identity = 109/425 (25.65%), Postives = 185/425 (43.53%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKH--------SELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQL------ERNVNIYGEAFYSHKYGYKMCL-------SIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELIN 1289 S +E G Y F+ +++ C IC + A PCG ++C CI+K + + CP D N+I+ N L D I L+VKCP K C+ K EL + +H C++ ++CP C+ ++ N ++EH + + + + E E +NE+ +EF+ ++ + ++++ I + N + N L E L +H+ H+ + E ET I +L+ RL+ DH+ +E+ K ME + H E+K + IR+L+ ++ ++ C G Y W I+N S L ER V ++ FY+ K GYK+CL S + A +I + M+GE+DSYL WPFQ + +++ Sbjct: 25 GSFAEETQG----YDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVD-----NEILLEN-QLFPDNFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQ----CQGTFPKNH-LKEHVTQECPRRQVCCPNCATSMAYEDKEMQRNELARHMQEFT-----------QVHMRMMAQSFQNISVTAANPVPFLN------------GLHFEPALF-SHVS--HAAYDCNPEVENFKET----IQQLEGRLVRQDHQIRELIAK-----------METQNTHMAELK----RTIRNLEGRVTELEAEQCH--GIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGEYDSYLPWPFQGTIRLSILD 387
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1DBK6 (TRAF-4 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.089e-22 Identity = 120/477 (25.16%), Postives = 209/477 (43.82%), Query Frame = 3 Query: 78 NSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRN--HIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQ----IRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLE------RNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKK---WKRPKKERNDPIYKNELVTLNEFSRSLKHD 1445 NS + L K K+ F + +L C +C+DI+++A CGC+YC ECI +L C + ++C++ I + +D TN IS L VKC + C F+D L I H+ C YR+ C C Y E + L + E+L +Y L KE++ S E S++ C + + + +S+++ L+H + EN L H+ + + +E + ++++ + L +L+ +NK +E ++ + N + E MK+++ K RD LK ++ + G+Y W IK+ S+L +N I EAFY+ +GYKMC+ I + G +M+G++D L WPF++ I + + ++S S F D K ++RP++E N + ++ +E LK D Sbjct: 6 NSFQNTALKLYKDNKWRFTI--NDNLKCVMCQDILLDAIQTDCGCRYCKECIDNYLENGEKECVAEYEDCRSVI----TSYIYDRATNKEISLLKVKCLYEGCVFEDTLKSIKGHLDFCEYRNEMCSL----CGMEYIIKE--ESNHLANECLLREVLCQYCRTLLT-----FKEYNESHLCFE-----------SRDLCG-KYEAICPYGCTGESKVNLLHHR---KSCENKPLECPLHVFDCKQLIPKDQMTEHLNTSSYEHTLTIVTELRKLEKQNKHMEERMNILIEEN----QLLKATLEVMKLDLPKNSGSISRDTSLKRANKTIF---RNGKYMWKIKSFSKLRENAMRGKNPTILSEAFYTSDFGYKMCMKIYPCGDGVGKGTHLSIFFVIMKGDYDDILPWPFKNKVIITIFDDFSKSTNLSDT-----FKPDPKSICYQRPEEEYNIASGSPKFISFSELKNFLKKD 438
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 78.5666 bits (192), Expect = 5.692e-15 Identity = 101/443 (22.80%), Postives = 178/443 (40.18%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN----LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLK--LKLVQIGVYNCEKFGEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAY-------WILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 + Y F+ +++ C IC + +A PCG ++C CI K + + CP D N+++ + L D I L V+C C K EL + NHI C + + CP C++S +E + EH + S L+ + +N I ++ S + LK + C I + N +H M + +LRN N HS T R + + + + Q L ++ E+E ++ ++ E R+ +M E+ K++ L+ ++ +Q Y G Y W ++ S RN V ++ FY+ + GYK+CL + L +I + M+GEFDS L+WP Q + +++ ++ D + ++RP +RN Sbjct: 54 QGYDVDFDPPLESKYECPICLMGLRSAVQTPCGHRFCNCCIRKSIRDTGQKCPVD-----NEVLTED-QLFPDNFAKREILSLTVRCRNVGCMEKMELRHLENHIPHCKFATVPCPQ----CQESVWKSE-LEEHINQEC---SHRLITCPDCAENIIYAEKQ--LASHCDTDCLKAPV--------ACTFSIFGCREKMLRNDLALHMQEFTQMHMRYMADVLRNQTINGLISSHSASAASPTDSRGASSRPEGACQCNQELQQMRETVLELESRLVRQDHKLRELSIRNETQSTQM-TELRKKLASLEESMRELQAQQYQ----GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEGQHHVEVMETKPDL---QAFQRPTVQRN 464
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 77.411 bits (189), Expect = 1.301e-14 Identity = 104/456 (22.81%), Postives = 184/456 (40.35%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHF-------LIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEI------EILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN----LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLK--LKLVQIGVYNCEKFGEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAY-------WILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 + Y F+ +++ C IC + +A PCG ++C CI K + + CP D N+++ + L D I L V+C C K EL + NHI C + + CP C++S +E + EH LI +E ++ Y E +E L +E ++ ++ + LK + C I + N +H M + +LRN N HS T R + + + + Q L ++ E+E ++ ++ E R+ +M E+ K++ L+ ++ +Q Y G Y W ++ S RN V ++ FY+ + GYK+CL + L +I + M+GEFDS L+WP Q + +++ ++ D + ++RP +RN Sbjct: 54 QGYDVDFDPPLESKYECPICLMGLRSAVQTPCGHRFCNCCIRKSIRDTGQKCPVD-----NEVLTED-QLFPDNFAKREILSLTVRCRNVGCMEKMELRHLENHIPHCKFATVPCPQ----CQESVWKSE-LEEHINQECSHRLITCPDCAENII-YAEKQFHEQLCLFANTVCEYCNMELIRNQLASHCDTDCLK-APVACTFSIFGCREKMLRNDLALHMQEFTQMHMRYMADVLRNQTINGLISSHSASAASPTDSRGASSRPEGACQCNQELQQMRETVLELESRLVRQDHKLRELSIRNETQSTQM-TELRKKLASLEESMRELQAQQYQ----GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEGQHHVEVMETKPDL---QAFQRPTVQRN 488
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 77.411 bits (189), Expect = 1.301e-14 Identity = 104/456 (22.81%), Postives = 184/456 (40.35%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHF-------LIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEI------EILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN----LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLK--LKLVQIGVYNCEKFGEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAY-------WILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 + Y F+ +++ C IC + +A PCG ++C CI K + + CP D N+++ + L D I L V+C C K EL + NHI C + + CP C++S +E + EH LI +E ++ Y E +E L +E ++ ++ + LK + C I + N +H M + +LRN N HS T R + + + + Q L ++ E+E ++ ++ E R+ +M E+ K++ L+ ++ +Q Y G Y W ++ S RN V ++ FY+ + GYK+CL + L +I + M+GEFDS L+WP Q + +++ ++ D + ++RP +RN Sbjct: 54 QGYDVDFDPPLESKYECPICLMGLRSAVQTPCGHRFCNCCIRKSIRDTGQKCPVD-----NEVLTED-QLFPDNFAKREILSLTVRCRNVGCMEKMELRHLENHIPHCKFATVPCPQ----CQESVWKSE-LEEHINQECSHRLITCPDCAENII-YAEKQFHEQLCLFANTVCEYCNMELIRNQLASHCDTDCLK-APVACTFSIFGCREKMLRNDLALHMQEFTQMHMRYMADVLRNQTINGLISSHSASAASPTDSRGASSRPEGACQCNQELQQMRETVLELESRLVRQDHKLRELSIRNETQSTQM-TELRKKLASLEESMRELQAQQYQ----GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEGQHHVEVMETKPDL---QAFQRPTVQRN 488
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2a (TNF receptor-associated factor 2-like [Source:NCBI gene;Acc:103036375]) HSP 1 Score: 71.2478 bits (173), Expect = 1.209e-12 Identity = 87/360 (24.17%), Postives = 150/360 (41.67%), Query Frame = 3 Query: 417 NHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGE---------EMKVEIYKQ----------IRDL-------KLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 +HI++C C + +GC S E I +H +H LLL +I ++ +E+L+ + ++E +I+ L S ++++ +L+ Q +LAT L + + +EL SE+ ++ +L +R EL+ + E V V NR MERS+ E + K+EI +RDL K++ + Y+ G + W I + S+ R ++ AFY+ KYGYKMCL I L G +MRG D+ L WPF T+ L++ +N+ + I+ + + ++RP + N Sbjct: 204 DHIKLCTKFRTPCRFHVVGCDMS-VEKEKIHDHERACSYEHLNLLLHFIMGIKVNLESLQPQ------SLELASHKIQELHQSLRELELKMGQLS-AGAPVQGACAPPPPPPPTLATSFTPLPT---TVGAALELQLHSEKT------KVAELSRRCQELELKVGTFENIVC-VLNRE---MERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEGKMREMSAATYD----GVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNR---EHIIDAFRPDISSSSFQRPVSDMN 535
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf1 (TNF receptor-associated factor 1-like [Source:NCBI gene;Acc:103045252]) HSP 1 Score: 70.0922 bits (170), Expect = 2.460e-12 Identity = 97/462 (21.00%), Postives = 193/462 (41.77%), Query Frame = 3 Query: 153 LLCTICKDIMINAYIGPCGCKYCLECIMKHL-NEDNIFCPNDVDECQNQIIDININLHFDYLTNNN-----ISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKC--------------PYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKE---FSGSKSTIERLKQEIEILKISKNTCQ----IEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETN-WKEINKLKQRL--ME--LDHENKEIEGKVQ---EVFNRNAEWMERSSEHGEEMKVEIYKQI--RDLKLKLVQIGVYNCEKF---GEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 LC+ C +++ A+ CG +YC C+M L N ++ C E D ++ L D+ ++N I +L V C + C ++ L +H C Y + C + GC + TT + ++ ++++ + E RKE FS T + ++ ++S + +E+ R + E + + + L G L + +N + ++ + ++E ++++ L+QRL ME + N+E+E K Q V R+ +H E + E +++ +DL++ +Q + + G + W I +VSQ + + Y AFY+ +YG+K+C+ + + + G +M+G++D L+WPF+ T LI +Q+ + ++ + ++RP E N Sbjct: 27 FLCSSCNNVLNEAHQTQCGHRYCRACVMWLLRNNKDLIC-TKCKEDPGSESDSSMMLTLDHFFSDNAINKEIQELRVHCVNQGCGWRSTLKDFEDHQSQCEYALIPCNIGCGLMVLRKTLATHLEKGCPNNKTTCQVCCSALTPAELQSVTYFSLFLKDSKQE-SPKRKETCVFSEIGCTFKGNPDKVREHEVSSTSAHLHLLVEVVRNVQMSVPPPPE-RTVQYPALDLTLNGGELETDSGDTGANDKALSLHDDQAELEVGQQLHALQQRLQIMENIITALNREVE-KTQLTVVVLERDNHNNMNLIQHLEAVVAEQQQRLIRKDLQISSLQQSISAQQDVSYDGTFLWRICDVSQKLKEAATGQKSSQYSPAFYTSRYGFKVCMRLYMYGDGVGKGTHISLFFVIMKGDYDPLLSWPFKQKVTFFLI---DQNQREHVVDAFRPDLRSASFQRPVSEMN 481
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 83.1889 bits (204), Expect = 3.345e-17 Identity = 82/358 (22.91%), Postives = 157/358 (43.85%), Query Frame = 3 Query: 366 KCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIE---GKV--QEVFNRNAEWMERSSEHGEEMKVEIYKQIR-DLKLKLVQIGVYNCEKFGEYEWNIKNVSQLE------RNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDF-SNDKKWKRPKKERN 1382 KC E+S ++EL+ +H+ +C Y+ +C +S+ GCK T + ++EH +H L+ NL+ ++ L+ + + ++ + L + L + E+ + N+S + C+ ++++ TE LLR L +M+ TT + +++ L EL IE G V R A S H ++ + DL+ ++++ YN G+ W I++ ++ + R +++Y + FY+ +GY+MC L + G +MRGE+D+ L WPF+ T+ L+ +Q + L F ++RP + N Sbjct: 108 KCEEQSIA-REELV---SHLGICPYKQAECFFSQFGCKYKGTL-QGLKEHESGATQQHLSLVTARSANLELKVSMLQSQLAERANSADLLGTRVREL-------EKELISVGQTASKNES-VLCVVQRMLAVQTER-LLR-----LQESMQ-GTTRRADHDALRGDLDGTAATLHELGTRVAAIEESGGSVTHSSTPTRLAALDSALSRHDTQLFAHDTRLAEMDLRFQVLETASYN----GKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLL---DQGAARRQLSDTFKPDPASSSFRRPTSDMN 438
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 71.633 bits (174), Expect = 1.481e-13 Identity = 78/391 (19.95%), Postives = 153/391 (39.13%), Query Frame = 3 Query: 264 CPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNW--KEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDL---KLKLVQIGVYNCEKFGEYEWNIKNVSQLE------RNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDF-SNDKKWKRPKKERN 1382 CP+ + C+ + +L + ++ + CP ++ H+ C C + +GC T+ES+REH + H L++ L+ + L+ + E L Q + L + + S+ S + N+ + E +L H E L S +R ++T +++ L++RL L + ER H E ++ ++ + D +L++++ Y+ G+ W I++ ++ + R +++Y + FY+ +GYKMC L + G +MRGE+D+ L WPF+ T+ L+ +Q + L F ++RP + N Sbjct: 29 CPHRAEFCKYCSAAVTCSL-LERHHKEECAQYPLPCPNNCEEHGIPRAELSQHMSACAMSTKLCGFHMLGCTFKQGTSESVREHEESAVRSHFTLVISRNSELELQCARLQCSIEDHTNMSEMLTQRVAQL---------------EQDLSHWSTLTGSNNTRLGSTLE--MLTQHNEQLQSLHVAQRAPQRDADTAALRRDMATLRERLRAL-----------EAALGNPGPCEERC--HMHEQRLTMHDGLLDTAERRLQVLETAGYS----GKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLL---DQGAARRHLSDTFTPDPASGSFRRPDGDMN 381
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008091.1 (pep scaffold:Pmarinus_7.0:GL477915:34322:50582:-1 gene:ENSPMAG00000007312.1 transcript:ENSPMAT00000008091.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 53.9138 bits (128), Expect = 6.051e-8 Identity = 82/406 (20.20%), Postives = 150/406 (36.95%), Query Frame = 3 Query: 147 ADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIG-NHIRVCNY-------RHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEI-----ETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLN----------DNNYSNQSEIHCLNHEIMSLATENGLLRNHIENL-HSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQI--GVYNCEKFGEYEWNIKNV--------SQLERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQ 1262 A C C+ ++ +A CG ++C CI + + + C ND N ++ D + L V+C + C ++ L++ H+ C++ R + S+R + LL Y + ++++ T + G KS E Q E + KN + L N+ N E+H T L++ H +N+ H + +E + T + + ++ +R+ E D E + + ++ E E + I L +L ++ YN G + W IK+V + ER I AF++ +YGY++ L + + A L G +D+ LAWP+Q Sbjct: 1 ARFACGSCQGLLRDAVQTHCGHRFCKPCIARLITSVHRSC-NDTLMNSNFLVYSPTQFFPDAALRREMGVLPVRCVSEGCEWRGRLLEYDVAHVERCDWVLVPCLLAGCALLLPRAELHRHVAQECSVRPVPCAACAQ----LLPYRQLQKHQLHCRSRRTRECKLCGQKSIPEDKWQHHEERRCMKNRDTCPYSPLGCLYRGHGESLHNHDKNSVEVHLAIVYDAFKKTFEQLIKGHADNIKHPPSARLVAAEAQLATMDRRVEEVAKRV-ERDVRVSEASTRQGNIDRDETARLQNKMARVEHSDQETERSILGLTRRLAELENTAYN----GMFLWKIKHVINRLREAGNGAERPPQIDSPAFFTTRYGYRLRLRLCRSGEHVSAYAMLGPGPYDATLAWPYQ 396
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 50.0618 bits (118), Expect = 1.100e-6 Identity = 33/122 (27.05%), Postives = 49/122 (40.16%), Query Frame = 3 Query: 111 KKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMK--HLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISK-----LIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKC 455 + Y+ F +++ C IC + PCG ++C CI+ L + CP D N LH L +N +K L V+CP K C + EL + H C Y + C Sbjct: 49 QGYEADFEPPLESKYECPICLMALREPVQTPCGHRFCRACILHSMRLRDAGPKCPVD-----------NAVLHEGQLFPDNFAKREILSLTVRCPNKPCGHRGELRALQEHQLRCEYAQVPC 159
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO31692 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SX78]) HSP 1 Score: 78.1814 bits (191), Expect = 1.832e-15 Identity = 108/430 (25.12%), Postives = 173/430 (40.23%), Query Frame = 3 Query: 129 FNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLN-EDNIFCPNDVDECQ-NQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN-LHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLGAY------------WILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKK--WKRP 1367 F +L+C IC ++ + CG YC C K N +D + CP D + + NQ + D T + L VKC C++K EL H+ C++ +KC + GC N + KH E E + + EF + K+E E +K + C + I S+I C + H EN L +++++ + R N KEI K +++ + NKEIE +E+ N + IR LK ++ ++ G + W I + L IY +FY+ KYGYK ++L AY W+ A C+M GE+D+ L WPF+ T+ +I+ +Q +++LI D D+K + RP Sbjct: 17 FETPPSPELMCGICLMVVNKPVLTYCGHSYCNFCFNKWRNGKDVVTCPVDYKQLETNQFMA-------DKKTERQVLSLCVKCMNGPCSWKGELRDKKKHLTKCDHEVIKCVFD--GCDTRLARNS---------MEKHEETC---------EWKIVTCEFC----DVPYPKREEETVK-HRGDCPLAILP------CKFSDIGC------TFEGRQHAHVAHCENALQAHLDMACGTIRD---NNKEIRKNNKKIRD---NNKEIETLHEELNTAN-------------------QTIRKLKGQMAKL-------VGTFVWRICDYKDLYEE--IYSPSFYTSKYGYK----VQLKAYLHTNPFNGETHLWLYA--CIMVGEYDALLEWPFRRKITLYVIDQSDQRKHETLLINPDDVLPDRKKCFHRP 362
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO31690 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SX76]) HSP 1 Score: 76.6406 bits (187), Expect = 5.538e-15 Identity = 103/452 (22.79%), Postives = 170/452 (37.61%), Query Frame = 3 Query: 129 FNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLN-EDNIFCPNDVDECQ-NQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEI--ARLNDNNYSNQSE-----IHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKL------GAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKK--WKRPKKERNDPIYKNELVTLNEFSRS 1433 F +L+C IC ++ + CG +C C K N +D + CP D + + NQ + D T + L VKC C++K EL H+ C + +KC + GC N + KH E E + + EF + K+E E +K + C + I + +D + + HC N L G +R++ + + N + + + ++ ET KE+N Q IR+LK K+ ++ G + W I + L IY +FY+ KYGYK+ L L G + C+M GE+D+ L WPF+ T+ +I+ +Q +++LI D D+K + RP N ++L E + Sbjct: 17 FETPPSPELMCGICLMVVNKPVLTYCGHSFCNFCFNKWRNGKDVVTCPVDYKQLETNQFMA-------DKKTERQVLSLCVKCMNGPCSWKGELRDKKKHLTKCGHEVIKCVFD--GCDTRLARNS---------MEKHEETC---------EWKIVTCEFC----DVPYPKREEETVK-HRGDCPLAILPCKFSDIGCTFEGRQHAHVAHCENAVQAHLDMACGTIRDNNKEIRKNNKKIRGNNKEIETLHKELNTANQ-------------------------------------------TIRELKGKMAKL-------IGTFVWRICDYKDLYGE--IYSPSFYTSKYGYKVQLKANLRTNPFNGGTHLSLYACIMVGEYDALLEWPFRRKITLYVIDQSDQRKHETLLINPDDVLPDRKKCFHRPITGNNVGYGLTRFLSLEELTSG 384
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO35237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM27]) HSP 1 Score: 72.0182 bits (175), Expect = 2.600e-13 Identity = 91/367 (24.80%), Postives = 158/367 (43.05%), Query Frame = 3 Query: 285 CQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNE-SIREHFLIDIIKHSELLLEY-------IENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENG-----LLRNHIENLHSNMEL---VTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERS-SEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQL------ERNVNIYGEAFYSHKYGYKMCLSI------KLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHN 1298 CQN + + + H ++CP + + E K+ H R C C +S +GC +Y + ++REH +IKH LL + L+N++E E + K+ +ER K E +K R ND N L ++A + G +R ENL + + + + K++ N + + L +RL E+ +++ K+ NR +E S + H K +++++ DL++++ Q Y+ G + W I ++ +IY FY+H++GYK+C + ++ + LMRGE+DS L WPFQ TI LI+ N Sbjct: 140 CQNDVPERTLIEHL-----KKCPAFPIECPNECGVKRIERKKLSAHTRECPNALTDCRFSPLGC--TYKVKKIALREHQNKHVIKHMILLGRTTGEPQPNLLELENQLERFDGENTSFKTELERHKYEFAQMK----------ERFNDQNAR-------LGIVEKTVANQKGDIAEIWMRFDQENLVGEVRMRDKLKKFKVKTKANKECLLSLMKRL-EVQDDSQTNPNKL----NRRLSQLESSITIH----KTKLFQE--DLRIQIQQAISYD----GTFLWKIDKFTERYAEAKSGNATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYLSIFIALMRGEYDSILPWPFQETITITLIDQDN 467
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO48394 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJK8]) HSP 1 Score: 68.5514 bits (166), Expect = 2.736e-12 Identity = 108/478 (22.59%), Postives = 181/478 (37.87%), Query Frame = 3 Query: 129 FNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLN-EDNIFCPNDVDECQNQIIDIN-----INLHFDYLTNNN-----------------ISKLIVKCPEKSCNFKDELIKIGNHIRVCNYR----------------------------HMKCPYSRIGCKQSYTTNESIR-EHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGE-----AFYSHKYGYKMCLSIKLGAYWILAGLCL------MRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWK--RP 1367 F + +L+C IC ++ + CG YC CI K N ++ + CP D ++ + I + I L + NN S VKC + CN K I + H C +R + C +S IGC ++ ES R EH + H + E I + + +I L KE +++++QE++ +C + +N + I +I +L+ E+G+ N I H N E + T +++ + I K + ++ +L K +++ + V +D K V K G S + ++++ G+ FY+ +YGYKM L Y G L M+GE+D+ L WPF+ T+ LIN Q +++ I D + DKK K RP Sbjct: 20 FIIPPNDELICAICHMVVNEPVLTSCGHSYCKYCIEKWCNGKEVVTCPVDNEQLKPSQIFPDKKTDRIVLSLEVKCTNNPCRWKGELRQKQKHLKICSHKAVKCILEGCNVKVPRILMEKHTNTCGWRLLHCKPCNLSYPKKDEETVQHKDDCPLAFLPCRFSEIGC--TFKGRESARDEHCESAVQTHLHIACETIRDNKEQISDLHKE-------LDKVRQELQT-----KSCD-HMKEVNAIREKHDEAIRDNKGQIEALSKEHGIASNTI---HENKEQLDTLKKELGIASETIRKNRDQIAKLSTACK--------------------TQYTDGTFVWRICNYKDKYKKAVAFATNQEVKGGN--------SDSDDDISMAGDIMVSLPFYTSRYGYKMRLKAYPNGYGDGKGTHLSLSIRIMKGEYDAILEWPFRRKITLSLINQSEQWRSETVEIYPDDATPDKKHKFERP 451
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO49464 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG36]) HSP 1 Score: 65.0846 bits (157), Expect = 4.014e-11 Identity = 105/492 (21.34%), Postives = 184/492 (37.40%), Query Frame = 3 Query: 159 CTICKDIMINAYIGPCG---CKYCLECIMKHLNEDNIFCPNDVDE-----------CQNQIIDI-----NINLHFDYLTN--------NNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPY--SRIGCKQSYTTNESIREHFLI------------DIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIE---RLKQEIEILKISKNTCQIEIARLN--------DNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQR--LMELDHENKEIE---GKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIR---------------DLKLKLVQIGVYNCEKFGEYEWNIKNVSQL------ERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 C +C + + + PCG C+ CLE I++ ++ CP D +E C+ +I+ + N L +++ + N V+C C K + H+ C ++ C Y RI ++ +H ++ +++ H + E E L F G++ +E R + + + + T E AR + + Q E E +++A +N LR + L+ ER +E+ +LK+R L E++ +E + G ++ +R A G M +E +Q R DLKL++++ Y+ G Y W I ++ + +IY FY +YGYK C + + G LMRGEFD+ L WPF+ T +L+ +Q I + +KRP N Sbjct: 21 CPVCGNALKHPVQTPCGHRFCEGCLEPILRGPSK----CPVDGEELKIDGVFKDVCCRREILCLACYCPNRQLGCEWMKDLQYLEEHRANCEYKGVQCHNPGCQEKVAKRDLEAHLERCEFKPSDCQYCLQRIPAASMEDHLQTCEKHPVVCPHCGAEGICRDELLHHQTNICEQAE-LPCSFAKHGCHFKGTREALETHFRDQASVHVNLLLTATQNEEKARSEMAAKLSQMEKERAKQQEQMYEQREALAVANQN--LRTYQGKLN-------VIERSVAEQRRELAELKERIQLQEVEAAIREQDRRLGMIENEASRGAAPSSGPGSMGGTMALE-RRQDRNEHQLALHDIQLAEHDLKLQMLEATSYD----GTYIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYPNGDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLL---DQDRVHDIGDTFRPDPTSSSFKRPTSNMN 490
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601]) HSP 1 Score: 77.411 bits (189), Expect = 1.129e-14 Identity = 92/433 (21.25%), Postives = 172/433 (39.72%), Query Frame = 3 Query: 144 QADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKS--CNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNH-EIMSLATENGLLRNHIENLHSNMELVTTSER---KSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERN------VNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELIN--PHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 +A C C+ ++ CG ++C CI L+ N CP D++ I ++ H I L V C ++ C + L +I +H+ VC + + CP + CK+ E I +H +Y E ST E K ++ + ++ K+ + C NH SL L+ +H E L + + + + E+ ++ ++ RL L+ + ++ NR+ + + S H EI DL+ ++++ YN G W I++ + +++ +++Y + FY+ +GYKMC + L + G +MRGE+D+ L WPF+ T+ L++ P + L + + + ++RP E N Sbjct: 43 EAKYCCEACRLVLCQPRQTECGHRFCYSCINDILSCPNPVCPADMEPLFKDKIFRDVCCH------REIMALKVYCRSEANGCQEQMSLQQIPDHVNVCPFFEVPCPLGK--CKERMMRKE---------IPEHLAWKCKYRE-----------------STCEFCKNKMPLTELQKH----------KETVCPAFPVSCPNHCTSSSLPRSEKLMSSHTEKLLELELELRSLRQLRDEMESLRGTLDTVRTRLSALEQGGR---ASLETQLNRHDDML---SVH------EIRLADMDLRFQVLETASYN----GTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDA----FKPDPSSSSFRRPVAEMN 411
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: ENSORLT00000020861.2 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101167626]) HSP 1 Score: 69.3218 bits (168), Expect = 5.795e-12 Identity = 83/356 (23.31%), Postives = 149/356 (41.85%), Query Frame = 3 Query: 417 NHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHE-----------NKEIEGK--VQEVFNRNAEWMERSSE--HGEEMKVEIYKQIRDL-------KLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 +HI+ C+ C + +GC S E I +H +H LLL +I ++ +E+L+ + +E Q++ L S ++ +++L + + + C +LAT LHS M + +SE ++ +L +R EL+ + N+E+E E +NR + E + ++E +RDL K+K + Y+ G + W I + ++ R ++ AFY+ KYGYKMCL I L G +MRG D+ L WPF T+ L++ +N+ + I+ + + ++RP + N Sbjct: 205 DHIKFCSKFKAPCRFHVVGCDTS-VEKEKIHDHERQCSYEHLNLLLHFIMGIKVSLESLQPQ------RLEVASQKLHELHQSLRDLELRMSQLGRSGTAPLQGV-C----AATLATS-------FTPLHSAMGAALELQLQSEKT--KVAELSRRCQELELKVSTFENIVCILNRELERSCATMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMEGKMKDMSAATYD----GIFIWKISDFTKKRQDAMAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNR---EHIIDAFRPDISSSSFQRPVSDMN 532
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 65.0846 bits (157), Expect = 9.834e-11 Identity = 78/341 (22.87%), Postives = 128/341 (37.54%), Query Frame = 3 Query: 408 KIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLN---DNNYSNQSEIHC-LNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLE------RNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 K +H + C CP+S +GCK S N I EH ++H LLL + + R S S + + + + + C + + D S I C LN E+ ER S T L H+++ + K++ + N+ + +ERS + E + +R+L+ C G + W I + S R ++ AFYS KYGYKMCL + L G +MR ++D+ L WPF T+ L++ +N+ + I+ + ++RP E N Sbjct: 197 KFNDHAKSCAKSKSACPFSEVGCK-SVVENGKISEHEHSSTMEHLRLLLPMV------LSMTRTRLDTSPSGEWQEDSGLGLYRAPDDGCGAAASVPSVDLDKKVSALENIVCVLNREV---------------------------ERSSLT-----------LEAFSHQHRLDQEKIENLSNKIRQ-LERSLTVKDLQLSEAEQMVRELQY---------CTYDGIFVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQNNR---EHIIDAFRPDITSTSFQRPVSEMN 479
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 65.0846 bits (157), Expect = 1.005e-10 Identity = 78/341 (22.87%), Postives = 128/341 (37.54%), Query Frame = 3 Query: 408 KIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLN---DNNYSNQSEIHC-LNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLE------RNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 K +H + C CP+S +GCK S N I EH ++H LLL + + R S S + + + + + C + + D S I C LN E+ ER S T L H+++ + K++ + N+ + +ERS + E + +R+L+ C G + W I + S R ++ AFYS KYGYKMCL + L G +MR ++D+ L WPF T+ L++ +N+ + I+ + ++RP E N Sbjct: 204 KFNDHAKSCAKSKSACPFSEVGCK-SVVENGKISEHEHSSTMEHLRLLLPMV------LSMTRTRLDTSPSGEWQEDSGLGLYRAPDDGCGAAASVPSVDLDKKVSALENIVCVLNREV---------------------------ERSSLT-----------LEAFSHQHRLDQEKIENLSNKIRQ-LERSLTVKDLQLSEAEQMVRELQY---------CTYDGIFVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQNNR---EHIIDAFRPDITSTSFQRPVSEMN 486
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: unm_sa808 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101155367]) HSP 1 Score: 58.5362 bits (140), Expect = 1.332e-8 Identity = 75/387 (19.38%), Postives = 137/387 (35.40%), Query Frame = 3 Query: 417 NHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRK---EFSGSK-----STIERLKQEIEILKISKNTCQIEI---------------------------------------------ARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQ------LERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAG------LCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERN 1382 +HI+ C+ C + +GC S E I +H +H LLL YI ++ +E L+ E +G K ++ L+ + L + + ++ A L +S ++++ L L ++G N + L+ +E TT+ ME + +++ E + +ER+ + E+ ++R++ G + W I + ++ R ++ AFY+ KYGYKMCL I L G +MRG D+ L WPF T+ L++ N+ + I+ + ++RP E N Sbjct: 204 DHIKFCSKFRTPCRFHVVGCDMS-VEKEKIHDHERAFAYEHLNLLLHYIMGMKVSMEGLQPQGLETAGHKLVELQKSLRDLEARVSQLSTTSSGPPVQGAAASSSSSSSGPPGPPASVPLPPPPTLPPTLSVSTSFTPLPSSVGAALELQLHSEKTKVAELGRRCTELEVKSGTFENVVCVLNREVERFTTT------------------MEASNRQHKLDQDKIEALSNKVRQLERTVGLKDLTVAEMEGRLREMAATTFD---------GVFIWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNR---EHIIDAFRPDVTSSSFQRPVSEMN 559
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000026231.1 (SMESG000026231.1) HSP 1 Score: 842.032 bits (2174), Expect = 0.000e+0 Identity = 413/415 (99.52%), Postives = 415/415 (100.00%), Query Frame = 3 Query: 75 MNSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSI 1319 MNSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIR+LKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKS+ Sbjct: 1 MNSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRNLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSL 415
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070162.1 (SMESG000070162.1) HSP 1 Score: 246.128 bits (627), Expect = 2.305e-74 Identity = 153/476 (32.14%), Postives = 260/476 (54.62%), Query Frame = 3 Query: 75 MNSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIE----NLHSNMELVTTSERKSETNWKEINKLKQ----RLMELDHENKEIEGKVQEVFNRNAEWMER-SSEHGEEMKVEIYKQIRDLKLKLVQIGV--YNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLG----------------------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERND--PIYK 1397 ++ + + IY ++K+ F E+ +L C IC ++MI A PCGC +C +CI ++L+ D+ FCP CQ ++I+ ++ D N IS++IVKCP K+C F+DEL I NH+R C+ R + P++ IGCK + N+ ++ H D HS+LL + I NL E+E+++ E K + KQ+I+ +++ Q +I + N N+ EI LN E++ L EN LR+ IE ++++ + + E KS+ +I++LKQ + EL+ E + ++ ++ +NA R + +GE K I +I +L+L+++++ N + GE+EW I+N+SQ ++ I+ + FYS GYKMCLS+ + + I G +MRG+ D LAWPF++ TI++I+ N +++S IKY D + W +P +RN+ P+YK Sbjct: 5 LDKMSESIYKIMKENNFEIVNEISKELKCYICNELMIKACSAPCGCCFCSDCIEQYLDGDDKFCPGTSRRCQMKMINYANDIVIDIRANVKISEIIVKCPRKNCEFEDELEMIENHVRTCDKRPISYPFNAIGCKVNEAMNDEMKAHLNEDNYWHSKLLTDLINNLLGEMESMKNENIELKRENSQFKQKIDNIELQSANQQQKICEMESNEMENRGEIEQLNEEMVVLKNENRRLRSEIETNAQSINAIRQQIGIIETKSQL---QIDELKQNHQQQQQELNDEAEMPRREINKLNEQNANGASRVDNNNGETFKQVIDGEINNLELRMIEMETRFINAQIRGEFEWKIENLSQQVKDKWIHSKPFYSGPNGYKMCLSVNINHLEIENLSQRVRGRRMCLNVIIDWRICVGFYMMRGDSDDKLAWPFKYAVTIDVIDTANGDIWRSETIKYSDRPDAAGWMKPVTDRNERIPVYK 477
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070162.1 (SMESG000070162.1) HSP 1 Score: 245.358 bits (625), Expect = 3.339e-74 Identity = 153/473 (32.35%), Postives = 258/473 (54.55%), Query Frame = 3 Query: 84 LFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIE----NLHSNMELVTTSERKSETNWKEINKLKQ----RLMELDHENKEIEGKVQEVFNRNAEWMER-SSEHGEEMKVEIYKQIRDLKLKLVQIGV--YNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLG----------------------AYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERND--PIYK 1397 + + IY ++K+ F E+ +L C IC ++MI A PCGC +C +CI ++L+ D+ FCP CQ ++I+ ++ D N IS++IVKCP K+C F+DEL I NH+R C+ R + P++ IGCK + N+ ++ H D HS+LL + I NL E+E+++ E K + KQ+I+ +++ Q +I + N N+ EI LN E++ L EN LR+ IE ++++ + + E KS+ +I++LKQ + EL+ E + ++ ++ +NA R + +GE K I +I +L+L+++++ N + GE+EW I+N+SQ ++ I+ + FYS GYKMCLS+ + + I G +MRG+ D LAWPF++ TI++I+ N +++S IKY D + W +P +RN+ P+YK Sbjct: 1 MSESIYKIMKENNFEIVNEISKELKCYICNELMIKACSAPCGCCFCSDCIEQYLDGDDKFCPGTSRRCQMKMINYANDIVIDIRANVKISEIIVKCPRKNCEFEDELEMIENHVRTCDKRPISYPFNAIGCKVNEAMNDEMKAHLNEDNYWHSKLLTDLINNLLGEMESMKNENIELKRENSQFKQKIDNIELQSANQQQKICEMESNEMENRGEIEQLNEEMVVLKNENRRLRSEIETNAQSINAIRQQIGIIETKSQL---QIDELKQNHQQQQQELNDEAEMPRREINKLNEQNANGASRVDNNNGETFKQVIDGEINNLELRMIEMETRFINAQIRGEFEWKIENLSQQVKDKWIHSKPFYSGPNGYKMCLSVNINHLEIENLSQRVRGRRMCLNVIIDWRICVGFYMMRGDSDDKLAWPFKYAVTIDVIDTANGDIWRSETIKYSDRPDAAGWMKPVTDRNERIPVYK 470
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000014828.1 (SMESG000014828.1) HSP 1 Score: 239.965 bits (611), Expect = 1.486e-72 Identity = 145/459 (31.59%), Postives = 244/459 (53.16%), Query Frame = 3 Query: 84 LFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHI----ENLHSNMELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEMKVEIYKQIRDLKLKLVQIGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERNDPIYKNELVTLNEFSRSLKHDQ 1448 + + I+ +K+ K E++ DL+CTIC ++MI A PCGC++C +CI +L E+ FCP C+ Q+I+ + N+ D N IS+L+VKCP K C FKDEL I NH+ +C R + CP+S +GC+ + N+ + +H HS LL++ N +E+E+++ E K+ LKQ+++ +K+ Q +I+ L + + SEI LN E++++ EN LR + E+L+ +++ + KS+ +E+N+ Q E ++E + + K+ E+ +N + + R E K I K I N E F E++W ++ +SQ R I+ + FYS K GYKMCLS + + LMRG+ D L WPF++ I++I+ + +++ S +I Y + W +P +RN I L+ L S ++ DQ Sbjct: 1 MSENIWKFMKENKIETGNEIKKDLMCTICNELMIKASNAPCGCRFCFDCIGNYLGENEQFCPGKSKWCKKQMINYSDNILIDCPINKMISELVVKCPRKYCLFKDELCLIENHMSLCEKRPISCPFSELGCEINEVVNDEMNDHLNEHGYWHSRLLIDSFNNFHSEMESMKNEIIELKTENNGLKQQLDDIKLQSTNQQKKISELENIENTMTSEITILNKEVVAIKNENRSLRMKVEKNAESLNEARQIIGEFQTKSQQQTEELNRYYQGQKEENNEIELLRRKINEICKQNLDLVSRLDNLDGEFKEIIDKNI-------------NEEIFEEFQWKVEKLSQQNRETEIFSKPFYSDKSGYKMCLSETIWDDLLYVYFHLMRGDSDDKLEWPFKYDVKIDVIDQQDSTIYTSQIISYSNRPTHLGWNKPSNDRNRGIL---LLKLPINSPAISSDQ 443
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070140.1 (SMESG000070140.1) HSP 1 Score: 236.113 bits (601), Expect = 6.922e-71 Identity = 149/439 (33.94%), Postives = 250/439 (56.95%), Query Frame = 3 Query: 105 LLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLECIMKHLNEDNIFCPNDVDECQNQIIDININLHFDYLTNNNISKLIVKCPEKSCNFKDELIKIGNHIRVCNYRHMKCPYSRIGCKQSYTTNESIREHFLIDIIKHSELLLEYIENLQNEIETLRKEFSGSKSTIERLKQEIEILKISKNTCQIEIARLNDNNYSNQSEIHCLNHEIMSLATENGLLRNHIEN---LHSNM-ELVTTSERKSETNWKEINKLKQRLMELDHENKEIEGKVQEVFNRNAEWMERSSEHGEEM-KVEIYKQIRDLKLKLVQ-----IGVYNCEKFGEYEWNIKNVSQLERNVNIYGEAFYSHKYGYKMCLSIKLGAYWILAGLCLMRGEFDSYLAWPFQHGFTIELINPHNQSLFKSILIKYFDFSNDKKWKRPKKERNDPI 1391 ++K+ KF E+ +L C IC ++MI A PCGC++C +CI +L+E++ FCP CQ +II+ ++ D N IS++IVKCP ++C F+DEL I NH+R CN R + CP++ IGCK + N+ ++ H D HS++L+ I NL +++E+++ E K + KQ + LK+ ++T Q ++ ++ +N EI LN E++ L EN LR+ +E L + M + + E K + + E+ + Q+L + ++ E+ ++ ++ NA R + E++ K I +++ DL+L + + I +CE E+EW I+N+SQL+R+ IY + FYS GYK+CLS+ + I LMRG+FD LAWPF++ TI++I+ + + S + K+ D S D W +P E+N I Sbjct: 8 IMKENKFEIVNEISRELKCNICNELMIKACSAPCGCRFCSDCIEHYLDENDKFCPGKSRYCQKKIINYANDIAIDNAINIRISEIIVKCPIQNCEFEDELQIIANHMRTCNKRPISCPFNMIGCKVNEVMNDEMKAHLNEDNYCHSKILISLINNLLSDMESMKSEIVNLKKENSQFKQRFDTLKL-QSTNQQKMIEIDKKEMTNDEEIEELNEEMVVLKNENRKLRSEMEKFTELFNKMRQQIGMIETKFQQQFDELKQNHQQLQKQLNKKLEMLREIDKLSEENANCASRVDNNDEKIFKQSIDEKMSDLELGMTEMETRLINARHCE---EFEWKIENLSQLKRDKCIYSKPFYSGPSGYKLCLSVTISDV-IRIYFHLMRGKFDDKLAWPFKYAVTIDVIDSLDGKTYCSKIRKFTDCSGDTGWNKPSTEKNKGI 441 The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TNF receptor-associated factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of TNF receptor-associated factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016053 ID=SMED30016053|Name=TNF receptor-associated factor|organism=Schmidtea mediterranea sexual|type=transcript|length=1744bpback to top protein sequence of SMED30016053-orf-1 >SMED30016053-orf-1 ID=SMED30016053-orf-1|Name=SMED30016053-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=471bp MNSLFDEIYGLLKKYKFIFNVEVQADLLCTICKDIMINAYIGPCGCKYCLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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