G_PROTEIN_RECEP_F1_2 domain-containing protein

Overview
NameG_PROTEIN_RECEP_F1_2 domain-containing protein
Smed IDSMED30016025
Length (bp)1803
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of G_PROTEIN_RECEP_F1_2 domain-containing protein (SMED30016025) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for G_PROTEIN_RECEP_F1_2 domain-containing protein (SMED30016025) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30016025

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
non-ciliated neuronSMED30016025SMESG000052989.1 dd_Smed_v4_58292_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A3S5CMM6 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS26816 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 3.634e-67
Identity = 141/361 (39.06%), Postives = 214/361 (59.28%), Query Frame = 3
Query:  594 SDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCK--SIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRL-RFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGN 1667
            ++   QW ++DSPWDLL  C  ++  +    ++  C+ S+I+G  SA++FPVI + G+ +N L  +IF   FR  TRQ IYL+ LAV D   ++  GW+W+F AKG+PYA+ G  YFFT+  G   C++HR+  +  SC   +IFLLT++DR  +I+ PLK   +P K+AWQ    + L+S +MM PF I      T  +K ICWL   +      TFLQ+Y+VLF+  G  QT+ II  NL+L  ++ +   LR+Q+    CK  + RKE+SA ++LL+LS +  + +LP +++++ AF+ Q     D    L R  YNI DIGW+L  +Q   N  +Y  +MP+FR    ++     G 
Sbjct:    2 ANEDPQWPYLDSPWDLLRDCFHIRKLENEHTDWTACILSRILGVLSAYIFPVIGLLGLLVNCLTAFIFLRCFRTPTRQMIYLACLAVSDGLTILLFGWLWVFPAKGIPYATDGKTYFFTFYSGWTECRIHRWAYSFTSCLGNNIFLLTTLDRCMSIYLPLKFSRLPQKRAWQMLLAITLVSGVMMLPFGISTGLYPTQGNKVICWLTEDQ------TFLQLYHVLFANAGFLQTVLIIAFNLALLIRLRQNALLRKQL---TCKFTTGRKEVSASILLLLLSTIVVICALPQTVAYMFAFIYQTALPHDTGSMLTRLAYNISDIGWNLLFLQYTANFFLYLSRMPNFRLATLRLITCRCGQ 353          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3SM37 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS6000 PE=4 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.064e-62
Identity = 131/353 (37.11%), Postives = 211/353 (59.77%), Query Frame = 3
Query:  609 QWKFIDSPWDLLISCEEVKLKQTNENNYL-FCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAF----LMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652
             W ++DSPWDLL  C+ +     N + Y   C+ S ++GF SA++FP +  FG+  NI + Y+F F FR  +RQ IYL+ +A  D   +I  GW+W+F AKGLPYA+   +YFF +N     CK+ RY  +  SC + SIFLLT+ DR   I++PL+   I  K+AW+   +  LLS +MM PF I + H  + N K ICW++   +       LQIY+VL +     QT+ +I++N++L  ++ +   LRE +  + C S  +EI+A ++L++LS +  + +LP SI+++L+     +++ +TG  A   +R  YNI D+GW L  +QQ +N ++Y  +M +FR    ++ +
Sbjct:   16 NWPYLDSPWDLLRDCQYLASGAANASIYRGACILSHMLGFVSAYIFPFVGFFGVLSNIFVTYVFLFVFRKPSRQMIYLACVAAADVATVILFGWIWMFPAKGLPYATGAHVYFFIFNVNNYSCKIFRYLYSFTSCVSSSIFLLTAFDRCLCIYFPLQFARISRKRAWEAVGVTTLLSALMMLPFGIMIGHGPS-NGKIICWVQVEPNA------LQIYHVLLANSSLVQTILVIIINIALLLRLRQSAVLRETM--SKCTSAHREIAASMLLVILSTIVVICALPQSIAYILSTVLPGILEGETGRMA---VRMAYNISDLGWQLLFIQQASNWVLYMKRMKNFRRATFRLLR 356          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A183SIW2 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS4160 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 7.902e-61
Identity = 127/349 (36.39%), Postives = 204/349 (58.45%), Query Frame = 3
Query:  609 QWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLA-FLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652
             W ++DSPWDLL  C++   +  N   +  CV S I+G  SA++FP++  FG+  N L+ Y+F F FR  +RQ IYL  +A+ D   ++  GWMW+F AKGLPYA+SG +YFF  N   + CK+ RY  +  SC + S+FL+T+ DR   +++PLK   +  K+AWQ   + +L   ++M P+ I   H +    K ICW+   +        LQIY+VL +     QT  +I+VN++L  ++ +   LRE +  + C S+ KEI+A ++L++LS +  + +LP S++++L+  L +   G      +R  +N+ D+GWHL   QQ  N L+Y  +M +FR    K+ +
Sbjct:    8 NWLYVDSPWDLLRDCKD--YQTGNSTKFGACVLSHILGITSAYIFPIVGTFGVVSNFLVFYVFLFVFRRSSRQMIYLGCVAIADMMTIVSFGWMWMFPAKGLPYATSGRVYFFVLNVNDLSCKVFRYVYSFTSCLSSSLFLVTACDRCLCVYFPLKFSRLSKKRAWQAVGLTILCCSLLMLPYPILARHDKFQG-KMICWVHEGEK------VLQIYHVLLANSSLLQTFLVIIVNIALVIRLRQSAALREAM--SKCVSVSKEIAASMLLVILSTMVVICALPQSVAYILSTILAKVLEGEHGRMVVRMTFNVSDLGWHLLFFQQSFNWLLYMKRMKNFRRANMKLLQ 345          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3WTZ7 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS4222 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 2.290e-57
Identity = 130/353 (36.83%), Postives = 212/353 (60.06%), Query Frame = 3
Query:  609 QWKFIDSPWDLLISCEEVKLKQTNENNYL-FCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISF----LLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652
             W + DSPWDLL  C++     +N +++L  C+ S ++GF SA++FP + +FG+  NIL+ YIF F FR  +RQ IYL  +A  D   +I  GW+W+F AKGLPYA+   +YFF  N  +  CK+ RY  +  SC + S+FLLT+ DR   +++PLK   I  ++AW+   ++ L S + M PF + ++H+ + N K ICW++   +       LQIY+VL +     QT+ +I++N++L  ++ +   LRE +  + C S  +EI+A ++L++LS +  + +LP SI++    +LA ++  DTG  A   +R  YNI D+GW L   QQ +N  +Y  +M +FR    ++ +
Sbjct:   16 NWPYFDSPWDLLRDCQDYNSDISNTSSHLGACILSHMLGFLSAYIFPFVGLFGVVSNILVTYIFLFVFRKPSRQMIYLGCVAAADVITIILFGWIWVFPAKGLPYATGARVYFFILNVNIYSCKIMRYLYSFSSCLSSSLFLLTAFDRCLCVYFPLKFARISRRRAWEAVGVITLFSALAMLPFGLLVEHTLS-NGKIICWVKVGPNA------LQIYHVLLANSSLLQTILVIIINIALLIRLRQSAVLRETM--SKCTSANREIAASMLLVILSTIVVICTLPQSIAYVFSTILAEVLDGDTGRTA---VRIAYNISDLGWQLLFFQQASNWALYMKRMKNFRRATLRLLR 356          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3T6L1 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS2698 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.742e-57
Identity = 128/350 (36.57%), Postives = 210/350 (60.00%), Query Frame = 3
Query:  609 QWKFIDSPWDLLISCEEVKLKQTNENNYL-FCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQND-TGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652
             W ++DSPWDLL  C+ +     N + Y   C+ S ++GF SAF+FP + +FG+  NI + Y+F F FR  +RQ IYL+ +A  D   +I  GW+W+F +KGLPYA+   +YFF +N     CK+ RYF +  SC + SIFLLT+ DR   I++PL+   I  K+AW+   +  LLS ++M PF I ++H  + N K ICW++   +       LQIY+VL +     QT+ +I++N++L +++ +   LRE +  + C S  +EI+A ++L++LS +  + +LP S++++L+ ++     G      +R  YNI D+GW L   QQ T+ ++Y  +M +FR    ++ +
Sbjct:   16 NWAYLDSPWDLLRDCQYLNSGAANASIYRGACILSHMLGFVSAFIFPFVGVFGVISNIFVTYVFLFVFRKPSRQMIYLACVAAADVATIILFGWIWMFPSKGLPYATGAHVYFFIFNVSNYSCKIFRYFYSFTSCVSSSIFLLTAFDRCLCIYFPLQFARISRKRAWEAVGVTTLLSALLMLPFGIMVEHGPS-NGKIICWVQVEANT------LQIYHVLLANSSLIQTIIVIIINIALLFRLRQSALLRESM--SKCTSANREIAASMLLVILSTIVVISALPQSVAYILSTVLSGVLEGEKGRMAVRMAYNISDLGWQLLFFQQATSWVLYMKRMKNFRRATFRLLR 356          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: prlhr2b (prolactin-releasing peptide receptor-like [Source:NCBI gene;Acc:103046295])

HSP 1 Score: 49.2914 bits (116), Expect = 7.082e-6
Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 3
Query: 1017 ISIFLLTSI--DRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSE-TGNHKTIC---WL--EASKDKETLGTFLQIYNV-LFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRL---RFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIF 1649
            +S+F LT+I  DRY+A   PLK   I +       S + LLS  +++P +++  H E  G   TIC   WL  E  +      T L  Y + L + C S+  +++ L N      V  G + R Q +A   +  +++I   V L+V +  F V  LP  +  +L          D D RL   R    I  +     M   C N  +Y W    FR+ ++KIF
Sbjct:  133 VSVFTLTAIAVDRYYATVHPLK-KRISMVACVYILSGIWLLSCTLVAPAVVHTYHVEFEGEDLTICEEFWLGQETERLVYAYSTLLITYILPLSAVCVSYLCISVKLRNC-----VAPGHRTRAQAEAQRAR--KRKIFRLVSLVVAA--FGVCWLPIHVFNVLR---------DIDIRLINKRHFLLIQLLCHLCAMSSSCCNPFLYAWLHDRFRAELRKIF 336          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: prlhr2b (prolactin-releasing peptide receptor-like [Source:NCBI gene;Acc:103046295])

HSP 1 Score: 49.2914 bits (116), Expect = 7.847e-6
Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 3
Query: 1017 ISIFLLTSI--DRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSE-TGNHKTIC---WL--EASKDKETLGTFLQIYNV-LFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRL---RFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIF 1649
            +S+F LT+I  DRY+A   PLK   I +       S + LLS  +++P +++  H E  G   TIC   WL  E  +      T L  Y + L + C S+  +++ L N      V  G + R Q +A   +  +++I   V L+V +  F V  LP  +  +L          D D RL   R    I  +     M   C N  +Y W    FR+ ++KIF
Sbjct:  151 VSVFTLTAIAVDRYYATVHPLK-KRISMVACVYILSGIWLLSCTLVAPAVVHTYHVEFEGEDLTICEEFWLGQETERLVYAYSTLLITYILPLSAVCVSYLCISVKLRNC-----VAPGHRTRAQAEAQRAR--KRKIFRLVSLVVAA--FGVCWLPIHVFNVLR---------DIDIRLINKRHFLLIQLLCHLCAMSSSCCNPFLYAWLHDRFRAELRKIF 354          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000055934.1 (endothelin receptor type B-like [Source:NCBI gene;Acc:103043510])

HSP 1 Score: 49.2914 bits (116), Expect = 7.963e-6
Identity = 64/240 (26.67%), Postives = 109/240 (45.42%), Query Frame = 3
Query:  960 GVIPCKLHRYF-TAAISCSAISIFLLTSIDRYFAIF-WP-LKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSE---TGNHKTICWLEASKDKETLGTFLQIYNVL-------FSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVK 1640
            GV  CKL  +   A++  + +S+  L SIDRY A+  W  +K + IPL K  + + ++ L+S ++  P  +  D  E    G    +C L   +  +    FLQIY  +       F FC     LA  +V  +L       +K   +I   +    R+E++  V  LV  V+F +  LP  +S +L   + +   PD  + L F+  +  IG ++  +  C N +  Y+    F++  K
Sbjct:  147 GVHICKLMPFVQKASVGITVLSLCAL-SIDRYHAVTSWSRVKGMGIPLWKVLEVT-LIWLVSVVLAVPEALAYDMMEITYRGKKLQVCLLHPQQSTQ----FLQIYQDVKDWWLFGFYFC---LPLACTVVFYTLMSCEMLNRKKGMRIALNDHMKQRREVAKTVFCLV--VIFALCWLPLHLSRILKRTIYDPNDPDRCELLSFLLVMNYIGINMASLNSCINPVALYFVSQKFKNCFK 375          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: ednrba (endothelin receptor Ba [Source:ZFIN;Acc:ZDB-GENE-980526-16])

HSP 1 Score: 49.2914 bits (116), Expect = 7.977e-6
Identity = 65/239 (27.20%), Postives = 108/239 (45.19%), Query Frame = 3
Query:  960 GVIPCKLHRYF-TAAISCSAISIFLLTSIDRYFAIF-W-PLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDH---SETGNHKTICWLEASKDKETLGTFLQIYNV-----LFSFCGSFQTLAIILVNLSLFYQVCKGQKLRE----QIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRS 1631
            GV  CKL  +   A++  + +S+  L SIDRY A+  W  +K + +P   A + + ++ LLS ++  P  I  D       G H  IC L   +  +    F++ Y       LFSF        + L   ++FY +   + LR+    QI   +    R+E++  V  LVL  +F +  LP  +S +L   + N+  P+  + L F   +  IG ++  V  C N +  Y     F+S
Sbjct:  131 GVGLCKLVPFVQKASVGITVLSLCAL-SIDRYRAVASWNRIKGIGVPKWTAIEIT-LIWLLSIVLAVPEAIAFDMITMDYKGEHLRICLLHPMQKSQ----FMKFYKSAKDWWLFSF-----YFCMPLACTAVFYTLMTCEMLRKKNGVQIALNDHLKQRREVAKTVFCLVL--VFALCWLPLHLSRILKLTIYNEEDPNRCELLSFFLVLDYIGINMASVNSCINPIALYMVSKRFKS 356          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO46030 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR08])

HSP 1 Score: 48.521 bits (114), Expect = 3.272e-6
Identity = 44/162 (27.16%), Postives = 76/162 (46.91%), Query Frame = 3
Query: 1008 CSAISIFLLTSID--RYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLR---EQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFL 1478
            C   S+F LTS+   RY AI  PL+   + +K+A   +  + +LS + +SP+I  ++H E   +    W++    K        IY V          L++I    +   +    +KL    + +Q+A  +  RK I    +L+ ++ LF V  LPT+I +L
Sbjct:   88 CLFASVFTLTSVSVARYRAIIHPLRP-QLTVKRAKVITVFIWMLSVVPVSPYIYVLEHKEETQYCEEHWVDTKSRK--------IYTVTLFVIQYIIPLSLITAAYARIGKELGAKKLHADNKHLQSAQAEEARKVIR---MLIAVTALFAVCVLPTNIMWL 237          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000052989.1 (SMESG000052989.1)

HSP 1 Score: 732.25 bits (1889), Expect = 0.000e+0
Identity = 378/380 (99.47%), Postives = 379/380 (99.74%), Query Frame = 3
Query:  576 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPSTSNAHLSIR 1715
            MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVISIFGIFLNILIIYIFNFKFRDKTRQYIYLSFLA FDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFI+YMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPSTSNAHLSIR
Sbjct:    1 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVISIFGIFLNILIIYIFNFKFRDKTRQYIYLSFLAAFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIVYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPSTSNAHLSIR 380          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000053055.1 (SMESG000053055.1)

HSP 1 Score: 504.212 bits (1297), Expect = 4.020e-176
Identity = 242/372 (65.05%), Postives = 309/372 (83.06%), Query Frame = 3
Query:  576 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPST 1691
            M NLT+S+ KA+WK++DSPWDLL +CEE++L +T  N  +FC+FS IMGFWSA++ P+IS+FGI  N++ IYI + K  D+TRQYIYLSF+A  DS N+IC GW+WIFFAKGLPYAS G + FFTYNQG I CKLHRYF AAISCSA SIFLL S+DR+FAIFWPLKCLNIPL++AWQYS  V++ SFI+MSPF IYM ++ETGN KT+CW++ S D++ L  FLQ+YNVLFSFCGSFQT+AII+VN++LFYQ+ KGQK+R+QI+AA   ++RKE+SACVILLVLS+L+T+ SLPTSISF+ AFLMQ  TGP+A+ RLRF YNIGDIGW++YM+Q CTNGLV+YWKM  FR+   ++   ++  KA ++ +T
Sbjct:    1 MFNLTFSEQKARWKYVDSPWDLLTACEELRLSKTTGNTLVFCIFSHIMGFWSAYILPIISLFGIVSNMVTIYILSSKLHDRTRQYIYLSFIAGCDSVNIICYGWIWIFFAKGLPYASLGKVSFFTYNQGEISCKLHRYFIAAISCSASSIFLLASVDRWFAIFWPLKCLNIPLRRAWQYSIGVIISSFILMSPFAIYMGYTETGNQKTLCWIKVSTDEQGLAIFLQVYNVLFSFCGSFQTIAIIIVNVALFYQINKGQKVRDQIRAAKGSNVRKEMSACVILLVLSILYTICSLPTSISFIFAFLMQKATGPEAENRLRFAYNIGDIGWNIYMMQLCTNGLVFYWKMASFRNAFHRLLHNNMVLKATSTKNT 372          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022976.1 (SMESG000022976.1)

HSP 1 Score: 265.003 bits (676), Expect = 1.160e-82
Identity = 148/349 (42.41%), Postives = 220/349 (63.04%), Query Frame = 3
Query:  591 YSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDK--TRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRS 1631
            Y + K  W +IDSPWDLL+ CE++     +E     C+ S I+G +S ++FP + +FGI  N +I Y+F  ++  K  TRQ IYLS LA+ D+F++I  GW+WIF AKGLPY S G++Y+FT+N+    CK HRY  +  S  A+++FLLTSIDR  +I+ PLK        AW   ++  ++S I+M+PF I +  +    +  ICW+    D        Q+Y+VLFS CG  QT+AII VNL+L Y++  GQ+LR++++     S  KEISAC++L+VLS +F +GSLP S++++ A   Q  + PD+   +R  YN  DIGWHL+ +Q+ TN  VY  +M +F+ 
Sbjct:    2 YFEKKNAWLYIDSPWDLLVPCEDLNTTIEDERTSALCISSHILGVFSGYIFPFVGVFGIIFNFMIFYVFMIRYPPKLRTRQLIYLSALAIADNFSIITFGWLWIFPAKGLPYISKGLIYYFTFNENNPTCKAHRYIYSFASTLAVNLFLLTSIDRCLSIYKPLKYSKKGKTFAWTLVAITTVISGILMTPFAIIISLNVNKQNLIICWI----DDARFAVSGQLYHVLFSNCGFIQTIAIITVNLALLYKLKNGQELRKELR-NQTGSASKEISACILLVVLSSIFVIGSLPQSVAYMFAMYYQ--SVPDSGDLVRLSYNFSDIGWHLFFIQEATNWFVYMARMKNFKE 343          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022744.1 (SMESG000022744.1)

HSP 1 Score: 162.155 bits (409), Expect = 2.505e-44
Identity = 115/349 (32.95%), Postives = 190/349 (54.44%), Query Frame = 3
Query:  591 YSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIV 1637
            ++  K  + +IDSP+D+L  C+  K +  N N    C  S+I+GF S ++FP +   G+  NI I YIF F++  +TRQ I LS+LA+ D  N++  GW+WIF AKGLPY ++G +YFF  NQ  + C + R      S    +IFLL  +DR FAI++P + L I  K  +   S+V L    +    ++Y     T       +       ++L  FL +Y VL    G   T+ II+ NL+L  ++    K    +      +I++EI + + +L+LS++F  GSLP +  F +   +QND+  + +  L+F+Y++ D  + L +  +  + LVY  +M +FR+++
Sbjct:    4 FTSKKLNYSYIDSPYDMLYLCDP-KTENININ----CAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTILLSYLALADLLNILAFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLT---VLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIISNLALILKLVLLSKTNLLLIKTKSNNIQREIRSTITILILSLIFLSGSLPNTCLFFIMKSLQNDSTINQNY-LQFLYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALI 343          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000055742.1 (SMESG000055742.1)

HSP 1 Score: 142.51 bits (358), Expect = 4.579e-37
Identity = 124/346 (35.84%), Postives = 191/346 (55.20%), Query Frame = 3
Query:  600 LKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPT-SISFLLAFLMQND-TGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRS 1631
            LK+ + +ID+P+DLL  C          +  L CV S I G  S ++FP+ + FG   N+LI YIF  K+  KTRQ I L+ L+  D   ++  GW+W+F AKGLPYAS G++Y F  N     C+L R F +         FLL  +DR  AI++P+K +N   K A  Y+S+V+L   I  S  +     S     K  C   +  D  T+  FL+ + +LF   G+ Q + I+LVNL L ++V K  +  + +   + K  ++EI A V++L+LS+LF +GSLP  S ++++ +L  +     D   +L+ +Y +GD+G H     + TN  +YY+KM HF+S
Sbjct:    7 LKSNYSYIDTPYDLLYFCHSEDENNPKSDTQL-CVLSHIFGIISVYIFPIFASFGFISNLLICYIFIVKYSKKTRQTILLAVLSFADLLFILSLGWLWMFPAKGLPYASQGMIYLFIINLSDFSCRLFRGFCSFSFSWIFGAFLLVCLDRMLAIYYPMKMINFGYKSA-VYASLVMLGLCICCSTVMNVFLRSIKIGSKIFCTATSGYDVHTI-EFLKTWRLLFLNSGAIQMILIVLVNLLLLWKVIKTHEKTKILAECSMKIFKREIKATVVVLILSLLFLLGSLPGFSCTYIIIYLQGSTLNSTDLQDQLQILYILGDLGVHFIFFMESTNFFIYYFKMKHFQS 349          
The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3S5CMM63.634e-6739.06G_PROTEIN_RECEP_F1_2 domain-containing protein OS=... [more]
A0A0R3SM372.064e-6237.11G_PROTEIN_RECEP_F1_2 domain-containing protein OS=... [more]
A0A183SIW27.902e-6136.39G_PROTEIN_RECEP_F1_2 domain-containing protein OS=... [more]
A0A0R3WTZ72.290e-5736.83G_PROTEIN_RECEP_F1_2 domain-containing protein OS=... [more]
A0A0R3T6L12.742e-5736.57G_PROTEIN_RECEP_F1_2 domain-containing protein OS=... [more]
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
prlhr2b7.082e-629.15prolactin-releasing peptide receptor-like [Source:... [more]
prlhr2b7.847e-629.15prolactin-releasing peptide receptor-like [Source:... [more]
ENSAMXT00000055934.17.963e-626.67endothelin receptor type B-like [Source:NCBI gene;... [more]
ednrba7.977e-627.20endothelin receptor Ba [Source:ZFIN;Acc:ZDB-GENE-9... [more]
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO460303.272e-627.16Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000052989.10.000e+099.47SMESG000052989.1[more]
SMESG000053055.14.020e-17665.05SMESG000053055.1[more]
SMESG000022976.11.160e-8242.41SMESG000022976.1[more]
SMESG000022744.12.505e-4432.95SMESG000022744.1[more]
SMESG000055742.14.579e-3735.84SMESG000055742.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30016025 ID=SMED30016025|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1803bp
GTGGTTCATTTTAGAAAATGATCATAGTTCTCCGATACTATTACGTACTA
TCCCTAAGCTTCCTTTCTCCATCTCATTGTGTGCAGAGCAAATTCTTTTA
AATTTGTGTATAATTTTACAAATCGTTCTGTTTGAAGGATCGTTCTGTGA
AATCTAATTGGAAAATACATCAAAGATGCGTTCTCAAGTTTTCGTGATTT
TTGATTTAGAACTTTTATCCTTATAGCAAACAATTCATGTAATGAACATC
CATAACTAAAAGGTTTTGATGCAATTGTTACATTTCAATGAAATAAAAGA
TTAATTCTGGAAAATTCATGCATTTTAAACGAACATTATTAGAAATTAAA
CTTACCCCAAATAGCCCTTGAATTTATATTCATTTATTAATGGAATATAA
TTTTGTTTTTATTTCCTTCGTAATCTACCCAATCCAATCATTTCATTAAA
TAACATAAAAATAAGTTTATTCTAATTTTATTGGTTTAAATTAATGATAT
AATTTCGCAGAAATTAAACAAAATTGATATATAAAAAGAAATTTTAATAT
TTAGTTTAACGAAAAAAGTTTATAAATGCCTAATTTGACTTATTCCGATT
TAAAGGCCCAATGGAAGTTCATAGACAGCCCTTGGGATTTATTGATATCC
TGTGAAGAAGTCAAATTAAAACAAACTAATGAAAATAATTATTTGTTTTG
TGTTTTCAGTCAAATAATGGGATTTTGGTCGGCATTCGTTTTCCCAGTGA
TTTCTATATTTGGTATTTTCCTTAATATTTTAATTATTTATATTTTCAAC
TTTAAATTCCGAGATAAAACTCGCCAATATATTTATCTTTCGTTTCTAGC
AGTTTTTGATTCTTTCAATCTCATCTGCTCGGGATGGATGTGGATATTTT
TCGCTAAGGGTTTACCATACGCGTCGTCGGGAGTTCTTTATTTTTTCACT
TACAATCAAGGTGTGATACCTTGTAAACTTCACCGCTACTTTACAGCGGC
AATTTCCTGTTCAGCGATCTCGATTTTTCTGTTGACCTCAATAGATAGAT
ATTTTGCTATATTTTGGCCGCTGAAATGCTTAAATATTCCACTGAAAAAA
GCCTGGCAATATTCATCAATGGTCGTTTTATTGAGCTTTATAATGATGAG
TCCATTTATTATCTATATGGACCATAGTGAAACTGGAAACCATAAAACTA
TTTGCTGGCTAGAGGCATCTAAAGATAAAGAAACTTTAGGAACTTTTTTG
CAGATTTATAATGTTCTTTTTTCATTTTGTGGATCTTTTCAAACTTTGGC
AATCATTTTAGTCAATTTGAGTCTCTTTTATCAAGTGTGTAAAGGACAAA
AGTTAAGAGAACAAATTCAAGCTGCAAACTGTAAGAGCATCCGAAAAGAA
ATATCTGCTTGTGTAATTCTTTTAGTTTTGTCAGTTCTTTTTACAGTTGG
CTCATTGCCAACTTCAATATCTTTCCTTTTGGCTTTTCTCATGCAAAATG
ATACAGGTCCTGATGCTGACCAGCGCTTGAGATTCGTTTACAATATTGGC
GATATTGGTTGGCATTTATATATGGTACAGCAATGCACGAACGGGTTGGT
ATATTATTGGAAAATGCCTCATTTCCGAAGTATTGTGAAGAAAATATTCA
AAGTTTCCATTGGAAATAAAGCACCCACAAGTCCAAGTACATCAAATGCA
CATTTATCAATACGGTGACAAATATGTTTACGTATGTTTTATGCACAAAT
TTATCATTTTTGTATTGCATTGAGATTAGAATAGATGTTACCTCTTAAAA
AAA
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protein sequence of SMED30016025-orf-1

>SMED30016025-orf-1 ID=SMED30016025-orf-1|Name=SMED30016025-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=381bp
MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGF
WSAFVFPVISIFGIFLNILIIYIFNFKFRDKTRQYIYLSFLAVFDSFNLI
CSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISI
FLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDH
SETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSL
FYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISF
LLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHF
RSIVKKIFKVSIGNKAPTSPSTSNAHLSIR*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: molecular function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: biological process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 140..162
score: 25.06
coord: 278..302
score: 21.17
coord: 51..75
score: 19.27
coord: 325..351
score: 19.61
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 67..311
e-value: 6.1E-13
score: 48.7
NoneNo IPR availableGENE3DG3DSA:1.20.1070.10coord: 43..364
e-value: 3.1E-34
score: 120.3
NoneNo IPR availablePANTHERPTHR24238G-PROTEIN COUPLED RECEPTORcoord: 52..365
NoneNo IPR availableCDDcd149787tmA_FMRFamide_R-likecoord: 54..354
e-value: 5.70733E-17
score: 78.4436
NoneNo IPR availableSUPERFAMILYSSF81321Family A G protein-coupled receptor-likecoord: 35..373
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 138..156
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 66..343
score: 16.861