G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016025 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A3S5CMM6 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS26816 PE=4 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 3.634e-67 Identity = 141/361 (39.06%), Postives = 214/361 (59.28%), Query Frame = 3 Query: 594 SDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCK--SIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRL-RFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGN 1667 ++ QW ++DSPWDLL C ++ + ++ C+ S+I+G SA++FPVI + G+ +N L +IF FR TRQ IYL+ LAV D ++ GW+W+F AKG+PYA+ G YFFT+ G C++HR+ + SC +IFLLT++DR +I+ PLK +P K+AWQ + L+S +MM PF I T +K ICWL + TFLQ+Y+VLF+ G QT+ II NL+L ++ + LR+Q+ CK + RKE+SA ++LL+LS + + +LP +++++ AF+ Q D L R YNI DIGW+L +Q N +Y +MP+FR ++ G Sbjct: 2 ANEDPQWPYLDSPWDLLRDCFHIRKLENEHTDWTACILSRILGVLSAYIFPVIGLLGLLVNCLTAFIFLRCFRTPTRQMIYLACLAVSDGLTILLFGWLWVFPAKGIPYATDGKTYFFTFYSGWTECRIHRWAYSFTSCLGNNIFLLTTLDRCMSIYLPLKFSRLPQKRAWQMLLAITLVSGVMMLPFGISTGLYPTQGNKVICWLTEDQ------TFLQLYHVLFANAGFLQTVLIIAFNLALLIRLRQNALLRKQL---TCKFTTGRKEVSASILLLLLSTIVVICALPQTVAYMFAFIYQTALPHDTGSMLTRLAYNISDIGWNLLFLQYTANFFLYLSRMPNFRLATLRLITCRCGQ 353
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3SM37 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS6000 PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 2.064e-62 Identity = 131/353 (37.11%), Postives = 211/353 (59.77%), Query Frame = 3 Query: 609 QWKFIDSPWDLLISCEEVKLKQTNENNYL-FCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAF----LMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652 W ++DSPWDLL C+ + N + Y C+ S ++GF SA++FP + FG+ NI + Y+F F FR +RQ IYL+ +A D +I GW+W+F AKGLPYA+ +YFF +N CK+ RY + SC + SIFLLT+ DR I++PL+ I K+AW+ + LLS +MM PF I + H + N K ICW++ + LQIY+VL + QT+ +I++N++L ++ + LRE + + C S +EI+A ++L++LS + + +LP SI+++L+ +++ +TG A +R YNI D+GW L +QQ +N ++Y +M +FR ++ + Sbjct: 16 NWPYLDSPWDLLRDCQYLASGAANASIYRGACILSHMLGFVSAYIFPFVGFFGVLSNIFVTYVFLFVFRKPSRQMIYLACVAAADVATVILFGWIWMFPAKGLPYATGAHVYFFIFNVNNYSCKIFRYLYSFTSCVSSSIFLLTAFDRCLCIYFPLQFARISRKRAWEAVGVTTLLSALMMLPFGIMIGHGPS-NGKIICWVQVEPNA------LQIYHVLLANSSLVQTILVIIINIALLLRLRQSAVLRETM--SKCTSAHREIAASMLLVILSTIVVICALPQSIAYILSTVLPGILEGETGRMA---VRMAYNISDLGWQLLFIQQASNWVLYMKRMKNFRRATFRLLR 356
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A183SIW2 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS4160 PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 7.902e-61 Identity = 127/349 (36.39%), Postives = 204/349 (58.45%), Query Frame = 3 Query: 609 QWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLA-FLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652 W ++DSPWDLL C++ + N + CV S I+G SA++FP++ FG+ N L+ Y+F F FR +RQ IYL +A+ D ++ GWMW+F AKGLPYA+SG +YFF N + CK+ RY + SC + S+FL+T+ DR +++PLK + K+AWQ + +L ++M P+ I H + K ICW+ + LQIY+VL + QT +I+VN++L ++ + LRE + + C S+ KEI+A ++L++LS + + +LP S++++L+ L + G +R +N+ D+GWHL QQ N L+Y +M +FR K+ + Sbjct: 8 NWLYVDSPWDLLRDCKD--YQTGNSTKFGACVLSHILGITSAYIFPIVGTFGVVSNFLVFYVFLFVFRRSSRQMIYLGCVAIADMMTIVSFGWMWMFPAKGLPYATSGRVYFFVLNVNDLSCKVFRYVYSFTSCLSSSLFLVTACDRCLCVYFPLKFSRLSKKRAWQAVGLTILCCSLLMLPYPILARHDKFQG-KMICWVHEGEK------VLQIYHVLLANSSLLQTFLVIIVNIALVIRLRQSAALREAM--SKCVSVSKEIAASMLLVILSTMVVICALPQSVAYILSTILAKVLEGEHGRMVVRMTFNVSDLGWHLLFFQQSFNWLLYMKRMKNFRRANMKLLQ 345
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3WTZ7 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS4222 PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 2.290e-57 Identity = 130/353 (36.83%), Postives = 212/353 (60.06%), Query Frame = 3 Query: 609 QWKFIDSPWDLLISCEEVKLKQTNENNYL-FCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISF----LLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652 W + DSPWDLL C++ +N +++L C+ S ++GF SA++FP + +FG+ NIL+ YIF F FR +RQ IYL +A D +I GW+W+F AKGLPYA+ +YFF N + CK+ RY + SC + S+FLLT+ DR +++PLK I ++AW+ ++ L S + M PF + ++H+ + N K ICW++ + LQIY+VL + QT+ +I++N++L ++ + LRE + + C S +EI+A ++L++LS + + +LP SI++ +LA ++ DTG A +R YNI D+GW L QQ +N +Y +M +FR ++ + Sbjct: 16 NWPYFDSPWDLLRDCQDYNSDISNTSSHLGACILSHMLGFLSAYIFPFVGLFGVVSNILVTYIFLFVFRKPSRQMIYLGCVAAADVITIILFGWIWVFPAKGLPYATGARVYFFILNVNIYSCKIMRYLYSFSSCLSSSLFLLTAFDRCLCVYFPLKFARISRRRAWEAVGVITLFSALAMLPFGLLVEHTLS-NGKIICWVKVGPNA------LQIYHVLLANSSLLQTILVIIINIALLIRLRQSAVLRETM--SKCTSANREIAASMLLVILSTIVVICTLPQSIAYVFSTILAEVLDGDTGRTA---VRIAYNISDLGWQLLFFQQASNWALYMKRMKNFRRATLRLLR 356
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3T6L1 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS2698 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.742e-57 Identity = 128/350 (36.57%), Postives = 210/350 (60.00%), Query Frame = 3 Query: 609 QWKFIDSPWDLLISCEEVKLKQTNENNYL-FCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQND-TGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFK 1652 W ++DSPWDLL C+ + N + Y C+ S ++GF SAF+FP + +FG+ NI + Y+F F FR +RQ IYL+ +A D +I GW+W+F +KGLPYA+ +YFF +N CK+ RYF + SC + SIFLLT+ DR I++PL+ I K+AW+ + LLS ++M PF I ++H + N K ICW++ + LQIY+VL + QT+ +I++N++L +++ + LRE + + C S +EI+A ++L++LS + + +LP S++++L+ ++ G +R YNI D+GW L QQ T+ ++Y +M +FR ++ + Sbjct: 16 NWAYLDSPWDLLRDCQYLNSGAANASIYRGACILSHMLGFVSAFIFPFVGVFGVISNIFVTYVFLFVFRKPSRQMIYLACVAAADVATIILFGWIWMFPSKGLPYATGAHVYFFIFNVSNYSCKIFRYFYSFTSCVSSSIFLLTAFDRCLCIYFPLQFARISRKRAWEAVGVTTLLSALLMLPFGIMVEHGPS-NGKIICWVQVEANT------LQIYHVLLANSSLIQTIIVIIINIALLFRLRQSALLRESM--SKCTSANREIAASMLLVILSTIVVISALPQSVAYILSTVLSGVLEGEKGRMAVRMAYNISDLGWQLLFFQQATSWVLYMKRMKNFRRATFRLLR 356
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: prlhr2b (prolactin-releasing peptide receptor-like [Source:NCBI gene;Acc:103046295]) HSP 1 Score: 49.2914 bits (116), Expect = 7.082e-6 Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 3 Query: 1017 ISIFLLTSI--DRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSE-TGNHKTIC---WL--EASKDKETLGTFLQIYNV-LFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRL---RFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIF 1649 +S+F LT+I DRY+A PLK I + S + LLS +++P +++ H E G TIC WL E + T L Y + L + C S+ +++ L N V G + R Q +A + +++I V L+V + F V LP + +L D D RL R I + M C N +Y W FR+ ++KIF Sbjct: 133 VSVFTLTAIAVDRYYATVHPLK-KRISMVACVYILSGIWLLSCTLVAPAVVHTYHVEFEGEDLTICEEFWLGQETERLVYAYSTLLITYILPLSAVCVSYLCISVKLRNC-----VAPGHRTRAQAEAQRAR--KRKIFRLVSLVVAA--FGVCWLPIHVFNVLR---------DIDIRLINKRHFLLIQLLCHLCAMSSSCCNPFLYAWLHDRFRAELRKIF 336
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: prlhr2b (prolactin-releasing peptide receptor-like [Source:NCBI gene;Acc:103046295]) HSP 1 Score: 49.2914 bits (116), Expect = 7.847e-6 Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 3 Query: 1017 ISIFLLTSI--DRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSE-TGNHKTIC---WL--EASKDKETLGTFLQIYNV-LFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRL---RFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIF 1649 +S+F LT+I DRY+A PLK I + S + LLS +++P +++ H E G TIC WL E + T L Y + L + C S+ +++ L N V G + R Q +A + +++I V L+V + F V LP + +L D D RL R I + M C N +Y W FR+ ++KIF Sbjct: 151 VSVFTLTAIAVDRYYATVHPLK-KRISMVACVYILSGIWLLSCTLVAPAVVHTYHVEFEGEDLTICEEFWLGQETERLVYAYSTLLITYILPLSAVCVSYLCISVKLRNC-----VAPGHRTRAQAEAQRAR--KRKIFRLVSLVVAA--FGVCWLPIHVFNVLR---------DIDIRLINKRHFLLIQLLCHLCAMSSSCCNPFLYAWLHDRFRAELRKIF 354
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000055934.1 (endothelin receptor type B-like [Source:NCBI gene;Acc:103043510]) HSP 1 Score: 49.2914 bits (116), Expect = 7.963e-6 Identity = 64/240 (26.67%), Postives = 109/240 (45.42%), Query Frame = 3 Query: 960 GVIPCKLHRYF-TAAISCSAISIFLLTSIDRYFAIF-WP-LKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSE---TGNHKTICWLEASKDKETLGTFLQIYNVL-------FSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVK 1640 GV CKL + A++ + +S+ L SIDRY A+ W +K + IPL K + + ++ L+S ++ P + D E G +C L + + FLQIY + F FC LA +V +L +K +I + R+E++ V LV V+F + LP +S +L + + PD + L F+ + IG ++ + C N + Y+ F++ K Sbjct: 147 GVHICKLMPFVQKASVGITVLSLCAL-SIDRYHAVTSWSRVKGMGIPLWKVLEVT-LIWLVSVVLAVPEALAYDMMEITYRGKKLQVCLLHPQQSTQ----FLQIYQDVKDWWLFGFYFC---LPLACTVVFYTLMSCEMLNRKKGMRIALNDHMKQRREVAKTVFCLV--VIFALCWLPLHLSRILKRTIYDPNDPDRCELLSFLLVMNYIGINMASLNSCINPVALYFVSQKFKNCFK 375
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Match: ednrba (endothelin receptor Ba [Source:ZFIN;Acc:ZDB-GENE-980526-16]) HSP 1 Score: 49.2914 bits (116), Expect = 7.977e-6 Identity = 65/239 (27.20%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 960 GVIPCKLHRYF-TAAISCSAISIFLLTSIDRYFAIF-W-PLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDH---SETGNHKTICWLEASKDKETLGTFLQIYNV-----LFSFCGSFQTLAIILVNLSLFYQVCKGQKLRE----QIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRS 1631 GV CKL + A++ + +S+ L SIDRY A+ W +K + +P A + + ++ LLS ++ P I D G H IC L + + F++ Y LFSF + L ++FY + + LR+ QI + R+E++ V LVL +F + LP +S +L + N+ P+ + L F + IG ++ V C N + Y F+S Sbjct: 131 GVGLCKLVPFVQKASVGITVLSLCAL-SIDRYRAVASWNRIKGIGVPKWTAIEIT-LIWLLSIVLAVPEAIAFDMITMDYKGEHLRICLLHPMQKSQ----FMKFYKSAKDWWLFSF-----YFCMPLACTAVFYTLMTCEMLRKKNGVQIALNDHLKQRREVAKTVFCLVL--VFALCWLPLHLSRILKLTIYNEEDPNRCELLSFFLVLDYIGINMASVNSCINPIALYMVSKRFKS 356
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO46030 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR08]) HSP 1 Score: 48.521 bits (114), Expect = 3.272e-6 Identity = 44/162 (27.16%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 1008 CSAISIFLLTSID--RYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLR---EQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFL 1478 C S+F LTS+ RY AI PL+ + +K+A + + +LS + +SP+I ++H E + W++ K IY V L++I + + +KL + +Q+A + RK I +L+ ++ LF V LPT+I +L Sbjct: 88 CLFASVFTLTSVSVARYRAIIHPLRP-QLTVKRAKVITVFIWMLSVVPVSPYIYVLEHKEETQYCEEHWVDTKSRK--------IYTVTLFVIQYIIPLSLITAAYARIGKELGAKKLHADNKHLQSAQAEEARKVIR---MLIAVTALFAVCVLPTNIMWL 237
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000052989.1 (SMESG000052989.1) HSP 1 Score: 732.25 bits (1889), Expect = 0.000e+0 Identity = 378/380 (99.47%), Postives = 379/380 (99.74%), Query Frame = 3 Query: 576 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPSTSNAHLSIR 1715 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVISIFGIFLNILIIYIFNFKFRDKTRQYIYLSFLA FDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFI+YMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPSTSNAHLSIR Sbjct: 1 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVISIFGIFLNILIIYIFNFKFRDKTRQYIYLSFLAAFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIVYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPSTSNAHLSIR 380
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000053055.1 (SMESG000053055.1) HSP 1 Score: 504.212 bits (1297), Expect = 4.020e-176 Identity = 242/372 (65.05%), Postives = 309/372 (83.06%), Query Frame = 3 Query: 576 MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIVKKIFKVSIGNKAPTSPST 1691 M NLT+S+ KA+WK++DSPWDLL +CEE++L +T N +FC+FS IMGFWSA++ P+IS+FGI N++ IYI + K D+TRQYIYLSF+A DS N+IC GW+WIFFAKGLPYAS G + FFTYNQG I CKLHRYF AAISCSA SIFLL S+DR+FAIFWPLKCLNIPL++AWQYS V++ SFI+MSPF IYM ++ETGN KT+CW++ S D++ L FLQ+YNVLFSFCGSFQT+AII+VN++LFYQ+ KGQK+R+QI+AA ++RKE+SACVILLVLS+L+T+ SLPTSISF+ AFLMQ TGP+A+ RLRF YNIGDIGW++YM+Q CTNGLV+YWKM FR+ ++ ++ KA ++ +T Sbjct: 1 MFNLTFSEQKARWKYVDSPWDLLTACEELRLSKTTGNTLVFCIFSHIMGFWSAYILPIISLFGIVSNMVTIYILSSKLHDRTRQYIYLSFIAGCDSVNIICYGWIWIFFAKGLPYASLGKVSFFTYNQGEISCKLHRYFIAAISCSASSIFLLASVDRWFAIFWPLKCLNIPLRRAWQYSIGVIISSFILMSPFAIYMGYTETGNQKTLCWIKVSTDEQGLAIFLQVYNVLFSFCGSFQTIAIIIVNVALFYQINKGQKVRDQIRAAKGSNVRKEMSACVILLVLSILYTICSLPTSISFIFAFLMQKATGPEAENRLRFAYNIGDIGWNIYMMQLCTNGLVFYWKMASFRNAFHRLLHNNMVLKATSTKNT 372
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022976.1 (SMESG000022976.1) HSP 1 Score: 265.003 bits (676), Expect = 1.160e-82 Identity = 148/349 (42.41%), Postives = 220/349 (63.04%), Query Frame = 3 Query: 591 YSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDK--TRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRS 1631 Y + K W +IDSPWDLL+ CE++ +E C+ S I+G +S ++FP + +FGI N +I Y+F ++ K TRQ IYLS LA+ D+F++I GW+WIF AKGLPY S G++Y+FT+N+ CK HRY + S A+++FLLTSIDR +I+ PLK AW ++ ++S I+M+PF I + + + ICW+ D Q+Y+VLFS CG QT+AII VNL+L Y++ GQ+LR++++ S KEISAC++L+VLS +F +GSLP S++++ A Q + PD+ +R YN DIGWHL+ +Q+ TN VY +M +F+ Sbjct: 2 YFEKKNAWLYIDSPWDLLVPCEDLNTTIEDERTSALCISSHILGVFSGYIFPFVGVFGIIFNFMIFYVFMIRYPPKLRTRQLIYLSALAIADNFSIITFGWLWIFPAKGLPYISKGLIYYFTFNENNPTCKAHRYIYSFASTLAVNLFLLTSIDRCLSIYKPLKYSKKGKTFAWTLVAITTVISGILMTPFAIIISLNVNKQNLIICWI----DDARFAVSGQLYHVLFSNCGFIQTIAIITVNLALLYKLKNGQELRKELR-NQTGSASKEISACILLVVLSSIFVIGSLPQSVAYMFAMYYQ--SVPDSGDLVRLSYNFSDIGWHLFFIQEATNWFVYMARMKNFKE 343
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022744.1 (SMESG000022744.1) HSP 1 Score: 162.155 bits (409), Expect = 2.505e-44 Identity = 115/349 (32.95%), Postives = 190/349 (54.44%), Query Frame = 3 Query: 591 YSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPTSISFLLAFLMQNDTGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRSIV 1637 ++ K + +IDSP+D+L C+ K + N N C S+I+GF S ++FP + G+ NI I YIF F++ +TRQ I LS+LA+ D N++ GW+WIF AKGLPY ++G +YFF NQ + C + R S +IFLL +DR FAI++P + L I K + S+V L + ++Y T + ++L FL +Y VL G T+ II+ NL+L ++ K + +I++EI + + +L+LS++F GSLP + F + +QND+ + + L+F+Y++ D + L + + + LVY +M +FR+++ Sbjct: 4 FTSKKLNYSYIDSPYDMLYLCDP-KTENININ----CAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTILLSYLALADLLNILAFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLT---VLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIISNLALILKLVLLSKTNLLLIKTKSNNIQREIRSTITILILSLIFLSGSLPNTCLFFIMKSLQNDSTINQNY-LQFLYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALI 343
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000055742.1 (SMESG000055742.1) HSP 1 Score: 142.51 bits (358), Expect = 4.579e-37 Identity = 124/346 (35.84%), Postives = 191/346 (55.20%), Query Frame = 3 Query: 600 LKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVXXXXXXXXXXXXXXXXXXXXRDKTRQYIYLSFLAVFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIIYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAIILVNLSLFYQVCKGQKLREQIQAANCKSIRKEISACVILLVLSVLFTVGSLPT-SISFLLAFLMQND-TGPDADQRLRFVYNIGDIGWHLYMVQQCTNGLVYYWKMPHFRS 1631 LK+ + +ID+P+DLL C + L CV S I G S ++FP+ + FG N+LI YIF K+ KTRQ I L+ L+ D ++ GW+W+F AKGLPYAS G++Y F N C+L R F + FLL +DR AI++P+K +N K A Y+S+V+L I S + S K C + D T+ FL+ + +LF G+ Q + I+LVNL L ++V K + + + + K ++EI A V++L+LS+LF +GSLP S ++++ +L + D +L+ +Y +GD+G H + TN +YY+KM HF+S Sbjct: 7 LKSNYSYIDTPYDLLYFCHSEDENNPKSDTQL-CVLSHIFGIISVYIFPIFASFGFISNLLICYIFIVKYSKKTRQTILLAVLSFADLLFILSLGWLWMFPAKGLPYASQGMIYLFIINLSDFSCRLFRGFCSFSFSWIFGAFLLVCLDRMLAIYYPMKMINFGYKSA-VYASLVMLGLCICCSTVMNVFLRSIKIGSKIFCTATSGYDVHTI-EFLKTWRLLFLNSGAIQMILIVLVNLLLLWKVIKTHEKTKILAECSMKIFKREIKATVVVLILSLLFLLGSLPGFSCTYIIIYLQGSTLNSTDLQDQLQILYILGDLGVHFIFFMESTNFFIYYFKMKHFQS 349 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016025 ID=SMED30016025|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1803bpback to top protein sequence of SMED30016025-orf-1 >SMED30016025-orf-1 ID=SMED30016025-orf-1|Name=SMED30016025-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=381bp MPNLTYSDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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