Transcription elongation factor A protein 1

Overview
NameTranscription elongation factor A protein 1
Smed IDSMED30015957
Length (bp)1428
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Transcription elongation factor A protein 1 (SMED30015957) t-SNE clustered cells

Violin plots show distribution of expression levels for Transcription elongation factor A protein 1 (SMED30015957) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Transcription elongation factor A protein 1 (SMED30015957) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Transcription elongation factor A protein 1 (SMED30015957) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30015957

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
posterior sideSMED30015957SMESG000027575.1 dd_Smed_v4_3176_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior muscle cellSMED30015957SMESG000027575.1 dd_Smed_v4_3176_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30015957SMESG000027575.1 Contig39714newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30015957SMESG000027575.1 Contig39714uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Human
Match: TCEA2 (transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614])

HSP 1 Score: 219.935 bits (559), Expect = 1.718e-67
Identity = 129/320 (40.31%), Postives = 183/320 (57.19%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            E+  +I++RL K++   K+  E  +  +  L  + +TL++L  T +G+ +N  RK+  D  VIA+AK LIK WKKL+  +    R R      P+   +   + D      KR  L  + S    +                PP PV      T D+ R K R M++ AL++ H  V  G+ D E LS QIE  IF    N+  +YK RVR+R+ NL+D  N +LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTTF  CN CG+RWKFC
Sbjct:    6 EEIARIARRLDKMV--TKKSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDP---SRKRPELPRAPSTPRITT--------------FPPVPV------TCDAVRNKCREMLTAALQTDHDHVAIGA-DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 299
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Human
Match: TCEA2 (transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614])

HSP 1 Score: 211.075 bits (536), Expect = 1.409e-64
Identity = 122/296 (41.22%), Postives = 169/296 (57.09%), Query Frame = 3 
Query:  108 IKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            +  +  L  + +TL++L  T +G+ +N  RK+  D  VIA+AK LIK WKKL+  +    R R      P+   +   + D      KR  L  + S    +                PP PV      T D+ R K R M++ AL++ H  V  G+ D E LS QIE  IF    N+  +YK RVR+R+ NL+D  N +LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTTF  CN CG+RWKFC
Sbjct:    1 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDP---SRKRPELPRAPSTPRITT--------------FPPVPV------TCDAVRNKCREMLTAALQTDHDHVAIGA-DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 272
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Human
Match: TCEA1 (transcription elongation factor A1 [Source:HGNC Symbol;Acc:HGNC:11612])

HSP 1 Score: 211.846 bits (538), Expect = 1.739e-64
Identity = 126/322 (39.13%), Postives = 185/322 (57.45%), Query Frame = 3 
Query:   33 MED-TFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            MED   + +K++ K+++  K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+ +  +T+++       P+  S+N     E+      +     E+   ++  SS                 F R   T+DS R+K R M++ AL +G  ++  G+ D E L  QIE AI+    N+  +YK RVR+R+ NL+D  N  LR NVL G +  +  A M++E+MASDE+KEMRK    E I E Q+  +GGT++DL  C KC++  C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:    1 MEDEVVRFAKKMDKMVQ--KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL-DGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSS-----------------FPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGA-DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Human
Match: TCEA1 (transcription elongation factor A1 [Source:HGNC Symbol;Acc:HGNC:11612])

HSP 1 Score: 209.534 bits (532), Expect = 1.629e-63
Identity = 125/322 (38.82%), Postives = 184/322 (57.14%), Query Frame = 3 
Query:   33 MED-TFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            MED   + +K++ K+++  K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+ +  +T+++       P+  S+N     E+      +     E+   ++  SS                 F R   T+DS R+K R M++ AL +G  ++  G+ D E L  QIE AI+    N+  +YK RVR+R+ NL+D  N  LR NVL G +  +  A M++E+MASDE+KEMRK    E I E Q+  +GGT++DL  C KC++  C+Y QVQTRSADEPMTTF  CN CG+RWK C
Sbjct:    1 MEDEVVRFAKKMDKMVQ--KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL-DGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSS-----------------FPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGA-DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKIC 301
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Human
Match: TCEA2 (transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614])

HSP 1 Score: 205.682 bits (522), Expect = 1.849e-62
Identity = 120/294 (40.82%), Postives = 167/294 (56.80%), Query Frame = 3 
Query:  108 IKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK 983
            +  +  L  + +TL++L  T +G+ +N  RK+  D  VIA+AK LIK WKKL+  +    R R      P+   +   + D      KR  L  + S    +                PP PV      T D+ R K R M++ AL++ H  V  G+ D E LS QIE  IF    N+  +YK RVR+R+ NL+D  N +LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTTF  CN CG+RWK
Sbjct:    1 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDP---SRKRPELPRAPSTPRITT--------------FPPVPV------TCDAVRNKCREMLTAALQTDHDHVAIGA-DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 270
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Celegans
Match: T24H10.1 (Putative transcription elongation factor S-II [Source:UniProtKB/Swiss-Prot;Acc:P52652])

HSP 1 Score: 211.075 bits (536), Expect = 2.105e-64
Identity = 122/320 (38.12%), Postives = 181/320 (56.56%), Query Frame = 3 
Query:   30 VMEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
             +E+T  + K++  I  +  E  E   K +++LS I M++ I+ KT IG+ +N  RKK  D +V   AK +IK WK +V + K+  ++      +     E   S +E    +K+I              S         S++ PPK +        D  R+K+  ++  AL  G +P+G+ D E L+VQIE  +++V  ++   Y   VR+R+ NLRD+ N+ LR NVL+G V AEK A M+SE+MAS E++EMR K+  E I E Q+ V  GT SD+ KC KC +  C+Y Q+QTRS+DEPMTTF +C  CG+RWKFC
Sbjct:    3 ALEETQSLCKQVDDICNNGMESVEQCNKLLDQLSKIPMSIEIIQKTNIGIKVNMMRKKVTDDAVAKRAKNIIKDWKNVV-DGKSKSQDDGGAPPAKKHRKE---SVEEAKPEKKKIE----APYKRPEPSSRPEIVAQFASASFPPKHL------ENDETRLKSAQLLLSALRFGDMPQGTLDPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASAEIREMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC 308
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Celegans
Match: rpc-11 (DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL;Acc:U4PMG8])

HSP 1 Score: 50.8322 bits (120), Expect = 8.352e-8
Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 3 
Query:  873 CPKCRESKCSYNQVQTRSADEPMTTFAYC--NSCGHRWK 983
            CP C   +  + Q+QTRSADEP T F  C  N+C HRWK
Sbjct:   69 CPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWK 107
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Fly
Match: TfIIS (gene:FBgn0010422 transcript:FBtr0332475)

HSP 1 Score: 194.897 bits (494), Expect = 4.145e-58
Identity = 86/164 (52.44%), Postives = 124/164 (75.61%), Query Frame = 3 
Query:  498 TDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            TD+ RIK R M++ AL+ G VPEG  + E ++ ++E AI++ F N+  +YK R+R+RV NL+D  N  LR N + G V+A++LA M+ E+MASDEMK++R+K++ E I+++QL    GT++DL+KC KC++  C+YNQ+QTRSADEPMTTF  CN CG+RWKFC
Sbjct:  150 TDAVRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313

HSP 2 Score: 62.3882 bits (150), Expect = 2.038e-10
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 3 
Query:   30 VMEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRN 293
            V E+ F+I K++ K + S+    +  +  ++ L  + + L+ILTKT IG+ +N+ RK  KD  VIA+AK LIK WK+ + +   T  N
Sbjct:    3 VEEEVFRIQKKMSK-MASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPN 89
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Fly
Match: TfIIS (gene:FBgn0010422 transcript:FBtr0080722)

HSP 1 Score: 194.897 bits (494), Expect = 4.145e-58
Identity = 86/164 (52.44%), Postives = 124/164 (75.61%), Query Frame = 3 
Query:  498 TDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            TD+ RIK R M++ AL+ G VPEG  + E ++ ++E AI++ F N+  +YK R+R+RV NL+D  N  LR N + G V+A++LA M+ E+MASDEMK++R+K++ E I+++QL    GT++DL+KC KC++  C+YNQ+QTRSADEPMTTF  CN CG+RWKFC
Sbjct:  150 TDAVRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313

HSP 2 Score: 62.3882 bits (150), Expect = 2.038e-10
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 3 
Query:   30 VMEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRN 293
            V E+ F+I K++ K + S+    +  +  ++ L  + + L+ILTKT IG+ +N+ RK  KD  VIA+AK LIK WK+ + +   T  N
Sbjct:    3 VEEEVFRIQKKMSK-MASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPN 89
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Fly
Match: CG8117 (gene:FBgn0030663 transcript:FBtr0074050)

HSP 1 Score: 144.821 bits (364), Expect = 5.292e-41
Identity = 67/159 (42.14%), Postives = 104/159 (65.41%), Query Frame = 3 
Query:  507 FRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK 983
             RIK R M++ AL+SG++P G  D + ++ ++E AI+        +YK R+R+R+ NLRD  N ELR   L G ++ E+L+ M+ E+MASD+MK+MR+KY+ + I+ +Q+    GT++D  KC +C +  CS  Q+  R  DEP+ TF  C+ CG+RWK
Sbjct:    5 IRIKCREMLATALKSGNMPPGCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTKTDQFKCERCDKRNCS--QLHIRDGDEPIITFVICDECGNRWK 161
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Fly
Match: CG33785 (gene:FBgn0061362 transcript:FBtr0091786)

HSP 1 Score: 45.8246 bits (107), Expect = 5.986e-6
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 3 
Query:  870 KCPKCRESKCSYNQVQTRSADEPMTTFAYC--NSCGHRWK 983
            +CP C   +  + Q+QTRSADEPMTTF  C  + C H W+
Sbjct:   68 ECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWR 107
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Zebrafish
Match: tcea2 (transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985])

HSP 1 Score: 205.297 bits (521), Expect = 3.584e-62
Identity = 123/318 (38.68%), Postives = 186/318 (58.49%), Query Frame = 3 
Query:   48 KISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXEN--GSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            +I+K+L K++  +K++ +  I  ++ L N++M+L  L  T IG+ +N  RK+  D  V  +AK LIK WKKL+  ++     +  +    S  S++  GSS+                ++N+     +  +  +   +  PP PV      TTDS R K R ++  AL++   H   G+ D E+++ QIE  I+  F ++  +YK R+R+R+ NL+DQ N +LR NVL G +S E++A M++E+MAS E+KE+RK    E I E QL   GGTE+D+  C KC+   C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:    9 RIAKKLDKMV--HKKNTDGAIDLLQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAKSLIKAWKKLLDGSEGKPEEKKGESPLQSSSSKDCPGSSD----------------TSNKPETPKTPTTPVTPKFTMFPPAPV------TTDSVRTKCRELLVAALQTDGDHQTIGA-DCEHMAAQIEDYIYQEFKSTDMKYKTRLRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKESIREHQLSKVGGTETDMFVCGKCKGKNCTYTQVQTRSADEPMTTFVLCNECGNRWKFC 301
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Zebrafish
Match: tcea1 (transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049])

HSP 1 Score: 181.8 bits (460), Expect = 4.698e-53
Identity = 94/174 (54.02%), Postives = 122/174 (70.11%), Query Frame = 3 
Query:  474 VFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
             F R   T+DS RIK R M+S AL++G  ++  GS D + L  QIE  IF  F N+  +YK RVR+R+ NL+D  N  LR NVL G VS +++A M++E+MASDE+KEMRK    E I + Q+  SGGT++DL  C KC++ KC+Y QVQTRSADEPMTTF +CN CG+RWKFC
Sbjct:  137 TFPRAPGTSDSVRIKCREMLSNALQTGDDYITIGS-DCDELGAQIEECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDELKEMRKNLTKEAIRDHQVATSGGTQTDLFTCGKCKKKKCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 309

HSP 2 Score: 55.4546 bits (132), Expect = 5.505e-8
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLV 266
            E+  +I+K++ K+  + K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+
Sbjct:    7 EEIIRIAKKMDKM--AQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKSLIKSWKKLL 81
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Zebrafish
Match: tcea1 (transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049])

HSP 1 Score: 176.407 bits (446), Expect = 6.248e-51
Identity = 92/172 (53.49%), Postives = 120/172 (69.77%), Query Frame = 3 
Query:  477 FQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKF 986
            F R   T+DS RIK R M+S AL++G  ++  GS D + L  QIE  IF  F N+  +YK RVR+R+ NL+D  N  LR NVL G VS +++A M++E+MASDE+KEMRK    E I + Q+  SGGT++DL  C KC++ KC+Y QVQTRSADEPMTTF +CN CG+RWK 
Sbjct:  138 FPRAPGTSDSVRIKCREMLSNALQTGDDYITIGS-DCDELGAQIEECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDELKEMRKNLTKEAIRDHQVATSGGTQTDLFTCGKCKKKKCTYTQVQTRSADEPMTTFVFCNECGNRWKV 308

HSP 2 Score: 55.4546 bits (132), Expect = 5.518e-8
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLV 266
            E+  +I+K++ K+  + K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+
Sbjct:    7 EEIIRIAKKMDKM--AQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKSLIKSWKKLL 81
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Zebrafish
Match: tcea3 (transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860])

HSP 1 Score: 160.614 bits (405), Expect = 5.093e-44
Identity = 76/166 (45.78%), Postives = 108/166 (65.06%), Query Frame = 3 
Query:  495 TTDSFRIKARSMISQALESGH-VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            T DS R K   M++ AL +     +   + E +  +IE  I+     +  +YK RVR+R+ NL+D  N  LR NVL+G +   ++A M++E+MASDE+K++R     E I E Q+  +GGT +DL++C KC++  C+YNQVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:  244 TGDSIRDKCIEMLTAALRTDDDYKDYGTNCEAMGAEIEDYIYQETKATDMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 409

HSP 2 Score: 62.003 bits (149), Expect = 5.916e-10
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTK 287
            ED  +I+K+L K++  N  D    +  +  L +  MTL +L  T IG+ +N  RK C D  V+ +AK LIK WK+L+ +A+  K
Sbjct:    5 EDLLRIAKKLDKMVSRNNMD--GALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDVVNLAKILIKNWKRLLESAQNPK 86
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Zebrafish
Match: tcea3 (transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860])

HSP 1 Score: 60.4622 bits (145), Expect = 3.175e-10
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTK 287
            ED  +I+K+L K++  N  D    +  +  L +  MTL +L  T IG+ +N  RK C D  V+ +AK LIK WK+L+ +A+  K
Sbjct:    5 EDLLRIAKKLDKMVSRNNMD--GALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDVVNLAKILIKNWKRLLESAQNPK 86
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Xenopus
Match: tcea1 (transcription elongation factor A (SII), 1 [Source:NCBI gene;Acc:394482])

HSP 1 Score: 220.705 bits (561), Expect = 7.621e-68
Identity = 125/326 (38.34%), Postives = 185/326 (56.75%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPV------FQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            ++   I+K+++++++  K++    +  ++ L N+ MTL +L  T IG+ +N  RK+  +  V ++AK LIK WKKL+                      +G S D +   EKR    +    +  +   S  S+         P P       F R   T+DS RIK R +++ AL++G  H+  G+ D + L  QIE A+F  F N+  +YK R+R+R+ NL+D  N  LR NVL G ++ +  A MS+E+MASDE+KEMRK    E I E Q+  +GGTE+DL  C KC++  C+Y QVQTRSADEPMTTF +CN CG+RWKFC
Sbjct:    7 DEIIHIAKKMERMVQ--KKNTAGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLL----------------------DGPSADME---EKRKDQPAPAQNSPEAREESSSSTNISARKEECPAPSDGFITSFPRAPSTSDSVRIKCRELLATALKTGDDHIAIGA-DVDELGAQIEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEAIREHQMARTGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 304
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Xenopus
Match: tcea1 (transcription elongation factor A (SII), 1 [Source:NCBI gene;Acc:394482])

HSP 1 Score: 203.371 bits (516), Expect = 3.571e-61
Identity = 121/327 (37.00%), Postives = 181/327 (55.35%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPV------FQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK-FC 989
            ++   I+K+++++++  K++    +  ++ L N+ MTL +L  T IG+ +N  RK+  +  V ++AK LIK WKKL+                      +G S D +   EKR    +    +  +   S  S+         P P       F R   T+DS RIK R +++ AL++G  H+  G+   E  S+     +F  F N+  +YK R+R+R+ NL+D  N  LR NVL G ++ +  A MS+E+MASDE+KEMRK    E I E Q+  +GGTE+DL  C KC++  C+Y QVQTRSADEPMTTF +CN CG+RWK FC
Sbjct:    7 DEIIHIAKKMERMVQ--KKNTAGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLL----------------------DGPSADME---EKRKDQPAPAQNSPEAREESSSSTNISARKEECPAPSDGFITSFPRAPSTSDSVRIKCRELLATALKTGDDHIAIGADVDELGSL---APVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEAIREHQMARTGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNECGNRWKNFC 303
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Xenopus
Match: cfap47 (chromosome X open reading frame 22 [Source:Xenbase;Acc:XB-GENE-1000867])

HSP 1 Score: 149.058 bits (375), Expect = 7.181e-43
Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3 
Query:  642 QYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            +Y+ R+R+R+ NL+D  N  LR NVL G V+ + +A M++E+MASDE++E+R     E I E Q+  +GGT +DL++C KC++  C+YNQVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:    2 KYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQNIATMTAEEMASDELRELRNTMTQEAIREHQMAKTGGTTTDLLQCEKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 117
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Xenopus
Match: tceanc (transcription elongation factor A (SII) N-terminal and central domain containing [Source:NCBI gene;Acc:100145741])

HSP 1 Score: 78.9518 bits (193), Expect = 1.782e-15
Identity = 47/171 (27.49%), Postives = 82/171 (47.95%), Query Frame = 3 
Query:  504 SFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVS-GGTESDLIKCPKCRESKCSYNQ-----------VQTRSADEPMTTFAYCNSCGHRW 980
            + R K   ++ QAL      E     + L+  IE  I+ +   +  +Y+  +R+++ NL++  N  L++ +LS  +S +  A M   +MA DE++ +R  Y    + E QL     G  ++ I+C +C +  C+              V+T + DE M TF  CN CG +W
Sbjct:  173 ALRTKCTELLYQALRED--SECQEKLQNLAKAIEENIYKIHAGNTKKYRNCIRSKISNLKNPKNSHLKMQILSRALSPKVFAEMGVMEMACDELRNLRANYTETCVQEHQLPQGVDGVHTNKIRCRRCDKFNCTVTMISRGTLFLPGWVRTGNPDEEMMTFVICNECGEQW 341
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Xenopus
Match: csgalnact1 (chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:Xenbase;Acc:XB-GENE-976931])

HSP 1 Score: 52.7582 bits (125), Expect = 3.694e-8
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 3 
Query:  873 CPKCRESKCSYNQVQTRSADEPMTTFAYCNS--CGHRWK 983
            CPKC   +  + Q+QTRSADEPMTTF  C +  CGHRW+
Sbjct:   69 CPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWR 107
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Mouse
Match: Tcea2 (transcription elongation factor A (SII), 2 [Source:MGI Symbol;Acc:MGI:107368])

HSP 1 Score: 209.149 bits (531), Expect = 1.211e-63
Identity = 123/320 (38.44%), Postives = 186/320 (58.13%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            E+  +I++RL K++   +++ E  +  +  L N+ +TL++L  T +G+ +N  RK+  D  +IA+AK LIK WKKL+  +    RN+      P+  S++ S   + L+ +K                          + + P    F +   T D+ R K R M++ AL++ H  V  G  + E+LS QIE  IF    N+  +YK RVR+R+ NL+D  N  LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTT+  CN CG+RWKFC
Sbjct:    5 EEIARIARRLDKMV--TRKNAEGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQGRGTPLPTSSSKDASRTTD-LSCKK---------------------PDPPRTPSTPRITTFPQVPITCDAVRNKCREMLTLALQTDHDHVAVG-VNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWKFC 299
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Mouse
Match: Tcea2 (transcription elongation factor A (SII), 2 [Source:MGI Symbol;Acc:MGI:107368])

HSP 1 Score: 204.912 bits (520), Expect = 4.948e-62
Identity = 119/300 (39.67%), Postives = 173/300 (57.67%), Query Frame = 3 
Query:   96 PETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            PE  +  +  L N+ +TL++L  T +G+ +N  RK+  D  +IA+AK LIK WKKL+  +    RN+      P+  S++ S   + L+ +K                          + + P    F +   T D+ R K R M++ AL++ H  V  G  + E+LS QIE  IF    N+  +YK RVR+R+ NL+D  N  LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTT+  CN CG+RWKFC
Sbjct:   16 PEGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQGRGTPLPTSSSKDASRTTD-LSCKK---------------------PDPPRTPSTPRITTFPQVPITCDAVRNKCREMLTLALQTDHDHVAVG-VNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWKFC 292
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Mouse
Match: Tcea1 (transcription elongation factor A (SII) 1 [Source:MGI Symbol;Acc:MGI:1196624])

HSP 1 Score: 204.527 bits (519), Expect = 1.097e-61
Identity = 121/296 (40.88%), Postives = 170/296 (57.43%), Query Frame = 3 
Query:  108 IKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+ +  +T ++       P+  S+N     E+ +    +     E+   ++  SS                 F R   T+DS R+K R M++ AL +G  +V  G+ D E L  QIE AI+    N+  +YK RVR+R+ NL+D  N  LR NVL G +  +  A M++E+MASDE+KEMRK    E I E Q+  +GGT++DL  C KC++  C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:   36 LDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL-DGPSTDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSS-----------------FPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGA-DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 312
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Mouse
Match: Tcea2 (transcription elongation factor A (SII), 2 [Source:MGI Symbol;Acc:MGI:107368])

HSP 1 Score: 201.83 bits (512), Expect = 8.262e-61
Identity = 118/299 (39.46%), Postives = 172/299 (57.53%), Query Frame = 3 
Query:   99 ETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            E  +  +  L N+ +TL++L  T +G+ +N  RK+  D  +IA+AK LIK WKKL+  +    RN+      P+  S++ S   + L+ +K                          + + P    F +   T D+ R K R M++ AL++ H  V  G  + E+LS QIE  IF    N+  +YK RVR+R+ NL+D  N  LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTT+  CN CG+RWKFC
Sbjct:   22 EGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQGRGTPLPTSSSKDASRTTD-LSCKK---------------------PDPPRTPSTPRITTFPQVPITCDAVRNKCREMLTLALQTDHDHVAVG-VNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWKFC 297
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Mouse
Match: Tcea1 (transcription elongation factor A (SII) 1 [Source:MGI Symbol;Acc:MGI:1196624])

HSP 1 Score: 183.726 bits (465), Expect = 7.073e-54
Identity = 89/173 (51.45%), Postives = 116/173 (67.05%), Query Frame = 3 
Query:  477 FQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            F R   T+DS R+K R M++ AL +G  +V  G+ D E L  QIE AI+    N+  +YK RVR+R+ NL+D  N  LR NVL G +  +  A M++E+MASDE+KEMRK    E I E Q+  +GGT++DL  C KC++  C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:  130 FPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGA-DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301

HSP 2 Score: 58.5362 bits (140), Expect = 4.779e-9
Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 3 
Query:   33 MED-TFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTK 287
            MED   +I+K++ K+++  K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+    T K
Sbjct:    1 MEDEVVRIAKKMDKMVQ--KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDK 84
[Close]
BLAST of Transcription elongation factor A protein 1 vs. UniProt/SwissProt
Match: sp|Q15560|TCEA2_HUMAN (Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.253e-67
Identity = 129/320 (40.31%), Postives = 183/320 (57.19%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            E+  +I++RL K++   K+  E  +  +  L  + +TL++L  T +G+ +N  RK+  D  VIA+AK LIK WKKL+  +    R R      P+   +   + D      KR  L  + S    +                PP PV      T D+ R K R M++ AL++ H  V  G+ D E LS QIE  IF    N+  +YK RVR+R+ NL+D  N +LR NVL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTTF  CN CG+RWKFC
Sbjct:    6 EEIARIARRLDKMV--TKKSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDP---SRKRPELPRAPSTPRITT--------------FPPVPV------TCDAVRNKCREMLTAALQTDHDHVAIGA-DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 299
[Close]
BLAST of Transcription elongation factor A protein 1 vs. UniProt/SwissProt
Match: sp|Q29RL9|TCEA1_BOVIN (Transcription elongation factor A protein 1 OS=Bos taurus OX=9913 GN=TCEA1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.470e-64
Identity = 124/322 (38.51%), Postives = 180/322 (55.90%), Query Frame = 3 
Query:   33 MED-TFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            MED   +I+K++ K+++  K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+    T K +      +      +  + +E  +       +   +A +    S                  F R   T+DS R+K R M++ AL +G  ++  G+ D E L  QIE AI+    N+  +YK RVR+R+ NL+D  N  LR NVL G +  +  A M++E+MASDE+KEMRK    E I E Q+  +GGT++DL  C KC++  C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:    1 MEDEVIRIAKKMDKMVQ--KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSS------------------FPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGA-DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
[Close]
BLAST of Transcription elongation factor A protein 1 vs. UniProt/SwissProt
Match: sp|P23193|TCEA1_HUMAN (Transcription elongation factor A protein 1 OS=Homo sapiens OX=9606 GN=TCEA1 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 8.353e-64
Identity = 126/322 (39.13%), Postives = 185/322 (57.45%), Query Frame = 3 
Query:   33 MED-TFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            MED   + +K++ K+++  K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+ +  +T+++       P+  S+N     E+      +     E+   ++  SS                 F R   T+DS R+K R M++ AL +G  ++  G+ D E L  QIE AI+    N+  +YK RVR+R+ NL+D  N  LR NVL G +  +  A M++E+MASDE+KEMRK    E I E Q+  +GGT++DL  C KC++  C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:    1 MEDEVVRFAKKMDKMVQ--KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL-DGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSS-----------------FPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGA-DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
[Close]
BLAST of Transcription elongation factor A protein 1 vs. UniProt/SwissProt
Match: sp|Q148K0|TCEA2_BOVIN (Transcription elongation factor A protein 2 OS=Bos taurus OX=9913 GN=TCEA2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.027e-63
Identity = 126/320 (39.38%), Postives = 180/320 (56.25%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGH--VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            E+  +I++RL K++   K+  E  +  +  L  + +TL++L  T +G+ +N  RK+  D  V+ +AK LIK WKKL+  +    R R      P+  S+  S   +     KR  L    S    +                PP PV      T D+ R K R M++ AL++ H  V  G+ D E L+ QIE  IF    N+  +YK RVR+R+ NL+D  N  LR  VL G ++ +++AVM+SE+MASDE+KE+RK    E I E Q+  +GGT++DL  C KCR+  C+Y QVQTRS+DEPMTTF  CN CG+RWKFC
Sbjct:    6 EEIARIARRLDKMV--TKKSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLDASDAKARERRRGGSLPTSSSKEASEAQDP--SRKRPELPRMPSTPRITT--------------FPPVPV------TCDAVRTKCREMLTAALQTDHDHVAIGA-DCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 300
[Close]
BLAST of Transcription elongation factor A protein 1 vs. UniProt/SwissProt
Match: sp|P52652|TFS2_CAEEL (Putative transcription elongation factor S-II OS=Caenorhabditis elegans OX=6239 GN=T24H10.1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.678e-63
Identity = 122/320 (38.12%), Postives = 181/320 (56.56%), Query Frame = 3 
Query:   30 VMEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
             +E+T  + K++  I  +  E  E   K +++LS I M++ I+ KT IG+ +N  RKK  D +V   AK +IK WK +V + K+  ++      +     E   S +E    +K+I              S         S++ PPK +        D  R+K+  ++  AL  G +P+G+ D E L+VQIE  +++V  ++   Y   VR+R+ NLRD+ N+ LR NVL+G V AEK A M+SE+MAS E++EMR K+  E I E Q+ V  GT SD+ KC KC +  C+Y Q+QTRS+DEPMTTF +C  CG+RWKFC
Sbjct:    3 ALEETQSLCKQVDDICNNGMESVEQCNKLLDQLSKIPMSIEIIQKTNIGIKVNMMRKKVTDDAVAKRAKNIIKDWKNVV-DGKSKSQDDGGAPPAKKHRKE---SVEEAKPEKKKIE----APYKRPEPSSRPEIVAQFASASFPPKHL------ENDETRLKSAQLLLSALRFGDMPQGTLDPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASAEIREMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC 308
[Close]
BLAST of Transcription elongation factor A protein 1 vs. TrEMBL
Match: A0A4S2KM50 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010844 PE=4 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.201e-101
Identity = 162/324 (50.00%), Postives = 224/324 (69.14%), Query Frame = 3 
Query:   33 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPV----FQRNT-DTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            ME+T KI++RL+K+L+S   D E+ +KY++RL  +EMTL+ILTKTG+G+IINK RK+  +  +  + K +IKQWKKLVP+    + + P+     S D+ NG + D+   G   I+                      +     P PV    F  +T  TTD FR+KAR MI  ALE G++P G++++E+L+++IE+AI+++F N+  +YKQRVRTRVMNLRD NN  LRLNVL G V+ +KLA M+SE+MAS EMKE+R+KY  E I + Q+ V+GGTE+DL+KC KC+++KC+YNQVQTRSADEPMTTF +CN CGHRWKFC
Sbjct:    1 MEETEKIARRLEKMLKSGNIDEESALKYLKRLRGVEMTLDILTKTGVGIIINKIRKESGNSEIATLGKNIIKQWKKLVPDK--VEPSTPNAGMKRSPDTSNGVASDD--GGPSDIK---------------HSRIEKTEPVESAPVPVSRGYFPVHTMTTTDQFRLKAREMIQSALECGNIPSGAYESEFLAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEEMASKEMKELREKYTKETIEDHQMAVTGGTETDLLKCGKCKQNKCTYNQVQTRSADEPMTTFVFCNHCGHRWKFC 305
[Close]
BLAST of Transcription elongation factor A protein 1 vs. TrEMBL
Match: A0A0X3PQS6 (Uncharacterized protein OS=Schistocephalus solidus OX=70667 GN=TR142783 PE=4 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 1.278e-99
Identity = 167/322 (51.86%), Postives = 220/322 (68.32%), Query Frame = 3 
Query:   33 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCS-VIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRI--RLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            ME T KI ++L K+++ N  D E  +KY+ RL   +MTL+ILTKTGIG+IINK RK+  DCS V ++ KQLIK+WKKLVP  +      PS     S D  NG+S D+    E+++  RL+ SE         +   +               ++ DT D  R+KAR MI  ALES  +P G+F+ EYL+++IET IFN+F ++ P+YKQRVRTRVMNLRD NN  LR+NVL G V  E+LA M+SE+MAS +MK++R+KY  E I + Q+ V+GGTESD++KC KC+++KC+YNQVQTRSADEPMTTF YCNSCGHRWKFC
Sbjct:    1 MEVTEKIVRKLDKMMKRNSIDNELTLKYLHRLQETDMTLDILTKTGIGIIINKIRKET-DCSEVTSLGKQLIKEWKKLVP--EKVDGTAPSAGSKRSPDHTNGTSGDDGGPTERKLARRLDDSEMHQSQDVPEAGGRAF-----------FMSKSLDTDDGIRLKAREMIQSALESSPIPSGAFEAEYLAIRIETEIFNLFKSTDPKYKQRVRTRVMNLRDSNNPSLRINVLMGHVKPERLASMTSEEMASKDMKDLREKYTKETIDDHQMAVTGGTESDILKCGKCKQNKCTYNQVQTRSADEPMTTFVYCNSCGHRWKFC 308
[Close]
BLAST of Transcription elongation factor A protein 1 vs. TrEMBL
Match: A0A1S8WLU6 (Transcription elongation factor S-II (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_08826 PE=4 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.434e-99
Identity = 165/323 (51.08%), Postives = 226/323 (69.97%), Query Frame = 3 
Query:   33 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENG-SSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPV----FQRNT-DTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK 983
            ME+T KI++RL+K+L+S   D E+ +KY++RL  +EMTL+ILTKTG+G+IINK RK+  +  V  + K +IKQWKKLVP+    + + P+     S D+ NG +S+D   +  K  R+E +E                       P PV    F  +T  TTD FR+KAR MI  ALE G+VP G++++E+L+++IE+AI+++F N+  +YKQRVRTRVMNLRD NN  LRLNVL G V+ +KLA M+SE+MAS EMKE+R+KY  E I + Q+ V+GGTE+DL+KC KC+++KC+YNQVQTRSADEPMTTF +CN CGHRWK
Sbjct:    1 MEETEKIARRLEKMLKSGNIDEESALKYLKRLRGVEMTLDILTKTGVGIIINKIRKESGNSEVATLGKNIIKQWKKLVPDK--VEPSTPNAGMKRSPDTSNGVASDDGGPSDTKHSRIEKTEPVEPA------------------PVPVSRGYFPVHTMTTTDQFRLKAREMIQSALECGNVPSGAYESEFLAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEEMASKEMKELREKYTKETIEDHQMAVTGGTETDLLKCGKCKQNKCTYNQVQTRSADEPMTTFVFCNHCGHRWK 303
[Close]
BLAST of Transcription elongation factor A protein 1 vs. TrEMBL
Match: C1LE55 (RNA polymerase II elongation factor OS=Schistosoma japonicum OX=6182 GN=TfIIS PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.628e-98
Identity = 160/331 (48.34%), Postives = 219/331 (66.16%), Query Frame = 3 
Query:   33 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKL------VP-----NAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTT-DSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            ME+T   ++RL ++L++ K D E+ +KY++RL NIEMTL ILTKTG+G+IINK RK+ +D  V  + K +IKQWKKL      VP        +T      +       S    S+D      KR R                      + S +  +  F  +T TT D  R+KAR M+  ALESG++P G++++E+L+++IE++I+++F N+ P+YKQRVRTRVMNLRD NN  LRLNVL G VS +KLA M+SE+MAS EMKE+R+KY  E I + Q+ V+GGTE+DL++C KC+++KC+YNQVQTRSADEPMTTF YCN+CGHRWKFC
Sbjct:    1 MEETEHFARRLDRMLKNKKIDDESALKYLKRLRNIEMTLEILTKTGVGIIINKIRKESEDPEVATLGKNMIKQWKKLVPDKSDVPAPCTNTVGSTNNGGNGNIKHSPELSTYVGSDDSGPQDAKRSR--------------PSEKKEPTEPSGNASRGFFPVHTLTTNDQVRLKAREMLQSALESGNIPSGAYESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREKYTKETIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRWKFC 317
[Close]
BLAST of Transcription elongation factor A protein 1 vs. TrEMBL
Match: A0A504YEY1 (Transcription elongation factor S-II OS=Fasciola gigantica OX=46835 GN=FGIG_08593 PE=4 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.641e-98
Identity = 158/325 (48.62%), Postives = 227/325 (69.85%), Query Frame = 3 
Query:   33 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPN------AKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            ME+T ++++RL+++L++ K + E  +KY+ RL  IEM L+ILTKTG+G+IINK RK+ ++  V  + K +IKQWKKLVP+        T    R  D ++     + G+SE ++   EK    +S +  +     S++ ++ S  S  + P  +      TTD  R+KAR MI  ALE G +P G++++E+L+++IE+AI+++F N+  +YKQRVRTRVMNLRD NN  LRLNVL G V+  KLA M+SE+MAS EMKE+R+KY  E I + Q+ V+GGTE+DL++C KC+++KC+YNQVQTRSADEPMTTF YCN+CGHRWKFC
Sbjct:    1 MEETERVARRLERMLKTGKIEDEPALKYLRRLKGIEMNLDILTKTGVGIIINKIRKESENPEVATLGKNIIKQWKKLVPDKVESSATPTIASKRSPDANNGVGSDDGGASEVKRARPEKVEANDSPKVPSTAPATSTMNTTNSGASRGYFPAQMHV----TTDEVRLKAREMIQSALEVGTIPTGAYESEFLAIRIESAIYDLFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPTKLASMTSEEMASKEMKELREKYTKETIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRWKFC 321
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Cavefish
Match: tcea1 (transcription elongation factor A1 [Source:NCBI gene;Acc:103034860])

HSP 1 Score: 187.963 bits (476), Expect = 1.852e-55
Identity = 87/174 (50.00%), Postives = 120/174 (68.97%), Query Frame = 3 
Query:  474 VFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
             F R   T+DS R+K R M++ AL++G  H+  G+ D + L  QIE  +F  F N+  +YK R+R+R+ NL+D  N  LR NVL G V   ++A M++E+MASDE+KEMRK    E I + Q+  +GGT +DL  C KC++++C+Y QVQTRSADEPMTTF +CN CG+RWKFC
Sbjct:  138 TFPRAPGTSDSVRLKCREMLTSALQTGDDHITIGA-DCDELGAQIEECVFMEFKNTDMKYKNRIRSRIANLKDAKNPNLRRNVLCGNVPPTRIAKMTAEEMASDELKEMRKNLTKEAIRDHQMAKTGGTVTDLFTCGKCKKNRCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 310

HSP 2 Score: 56.225 bits (134), Expect = 2.429e-8
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLV 266
            E+  +I+K++ K+  + K++    +  ++ L NI MTL +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+
Sbjct:    7 EEIIRIAKKMDKM--AQKKNGSGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKSLIKSWKKLL 81
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Cavefish
Match: tcea2 (transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985])

HSP 1 Score: 182.956 bits (463), Expect = 2.057e-53
Identity = 124/325 (38.15%), Postives = 186/325 (57.23%), Query Frame = 3 
Query:   48 KISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNA--KTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPE--GSFDTEYLSVQIETAIF-----NVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSC--GHRWKFC 989
            +I+K+L K+++  KE+ +  +  ++ L N++M+L  L  T IG+ +N  RK+  D  V ++AK LIK WKKL+  A  K+ ++N+       S  S   SS+D   + +       S+        ++  +  +   ++ PP PV      TTDS R K R ++  AL++    +  GS D + L+ +IE  I      + F ++  +YK R+R+R+ NL+DQ N +LR NVL G +S E++A M++E+MAS E+KEMRK    E I E QL   GGTE+D+  C KC+  KC+Y QVQTRSADEPMTTF  CN C  G    FC
Sbjct:    9 RIAKKLDKMVQ--KENTDGALDLLKELKNMKMSLETLQSTRIGMSVNAVRKQSSDDEVQSLAKSLIKAWKKLLDGAEGKSEEKNKGGPSLQSSTSSSTTSSKDSPGSSD-------SKKPETPKTPTTPTTPTTPKFTSFPPVPV------TTDSVRTKCRELLVAALQTDDDYKNIGS-DCDTLAAEIEDYILLNQTCSEFKSTDMKYKTRLRSRISNLKDQKNPDLRRNVLCGNISTERIATMTAEEMASAELKEMRKALTKESIREHQLSKVGGTETDMFICGKCKGKKCTYTQVQTRSADEPMTTFVLCNDCVWGCWGCFC 317
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Cavefish
Match: tcea2 (transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985])

HSP 1 Score: 174.481 bits (441), Expect = 1.039e-50
Identity = 110/277 (39.71%), Postives = 158/277 (57.04%), Query Frame = 3 
Query:  165 TGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNA--KTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLX-XXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKF 986
            T IG+ +N  RK+  D  V ++AK LIK WKKL+  A  K+ ++N+       S  S   SS+D        +R   +S+        ++  +  +   ++ PP PV      TTDS R K R ++  AL++        D +Y ++  +      F ++  +YK R+R+R+ NL+DQ N +LR NVL G +S E++A M++E+MAS E+KEMRK    E I E QL   GGTE+D+  C KC+  KC+Y QVQTRSADEPMTTF  CN CG+RWK 
Sbjct:    4 TRIGMSVNAVRKQSSDDEVQSLAKSLIKAWKKLLDGAEGKSEEKNKGGPSLQSSTSSSTTSSKDN-------VRPSYTSKKPETPKTPTTPTTPTTPKFTSFPPVPV------TTDSVRTKCRELLVAALQT--------DDDYKNIGSDCDTLAEFKSTDMKYKTRLRSRISNLKDQKNPDLRRNVLCGNISTERIATMTAEEMASAELKEMRKALTKESIREHQLSKVGGTETDMFICGKCKGKKCTYTQVQTRSADEPMTTFVLCNDCGNRWKV 259
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Cavefish
Match: tcea1 (transcription elongation factor A1 [Source:NCBI gene;Acc:103034860])

HSP 1 Score: 174.481 bits (441), Expect = 2.871e-50
Identity = 85/181 (46.96%), Postives = 118/181 (65.19%), Query Frame = 3 
Query:  474 VFQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIF--------NVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKF 986
             F R   T+DS R+K R M++ AL++G  H+  G+ D + L  QIE  I         + F N+  +YK R+R+R+ NL+D  N  LR NVL G V   ++A M++E+MASDE+KEMRK    E I + Q+  +GGT +DL  C KC++++C+Y QVQTRSADEPMTTF +CN CG+RWK 
Sbjct:  117 TFPRAPGTSDSVRLKCREMLTSALQTGDDHITIGA-DCDELGAQIEEYILFMSSSCTNSFFKNTDMKYKNRIRSRIANLKDAKNPNLRRNVLCGNVPPTRIAKMTAEEMASDELKEMRKNLTKEAIRDHQMAKTGGTVTDLFTCGKCKKNRCTYTQVQTRSADEPMTTFVFCNECGNRWKL 296
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Cavefish
Match: tcea3 (transcription elongation factor A protein 3-like [Source:NCBI gene;Acc:103044436])

HSP 1 Score: 162.155 bits (409), Expect = 6.393e-44
Identity = 76/166 (45.78%), Postives = 107/166 (64.46%), Query Frame = 3 
Query:  495 TTDSFRIKARSMISQALESGH-VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            T DS R K   M+S AL +     +   + + +  +IE  I+     +  +YK RVR+R+ NL+D  N  LR NVL G +   ++A M++E+MASDE+K++R     E I E Q+  +GGT +DL++C KC++  C+YNQVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:  334 TGDSIRDKCIEMLSAALRTDDDYKDYGANCDAMGAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPNLRKNVLDGAIDLRRIATMTAEEMASDELKQLRNVMTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 499

HSP 2 Score: 61.2326 bits (147), Expect = 1.048e-9
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTK 287
            E+  +I+K+L K++  N  + E  +  +  L +  MTL +L  T IG+ +N  RK C D  VI++AK LIK WK+L+ +A + K
Sbjct:    5 EELIRIAKKLDKMVSRN--NMEGALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDVISLAKILIKNWKRLLESAHSQK 86
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Sea Lamprey
Match: tcea2 (transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985])

HSP 1 Score: 203.756 bits (517), Expect = 1.583e-62
Identity = 127/299 (42.47%), Postives = 168/299 (56.19%), Query Frame = 3 
Query:  108 IKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPV---FQRNTDTTDSFRIKARSMISQALESGHVPE-GSFDTEYLSVQIETA-IFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            +  ++ L +I MTL++L  T IG+ +N  RK+  D  V ++AK LIK WKKL+  A   K        S +      SS+D     E+R+              SS       +S   P  PV   F R   T DS R+K R +IS AL++         D E +S QIE A IF    N+  +YK RVR+R+ NL+D  N ELR NVL G ++ EK+A M++E+MASDE+KE+RK    E I E Q+  +GGT SDL  C KC++   +Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:    4 LDLLKELKSIPMTLDVLQSTRIGMSVNAVRKQSSDDEVTSLAKSLIKSWKKLLDGADGAKSGDKDKGLSTTPPP---SSQDSMDGEEERL--------------SSGSGVCKSESGKSPGTPVATCFPRAPITGDSVRMKCRELISAALKTNDDYNIFGTDCEEVSAQIEHALIFQEMKNTDMKYKNRVRSRISNLKDVKNPELRKNVLCGNITPEKIARMTAEEMASDELKEIRKAMTKEAIREHQMAKTGGTVSDLFSCGKCKKKNTTYTQVQTRSADEPMTTFVLCNECGNRWKFC 285
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Sea Lamprey
Match: tcea3 (transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860])

HSP 1 Score: 187.963 bits (476), Expect = 5.173e-56
Identity = 112/312 (35.90%), Postives = 165/312 (52.88%), Query Frame = 3 
Query:  108 IKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVP--------------NAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKP---VFQRNTDTTDSFRIKARSMISQALESG-HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            +  ++ L  I MTL IL  T +G+++N  RK  KD  VI+++K LIK WKKL+               + +   R             +N S  + K                  S  S+  +  +  S + P  P    F     +++  R K R M++ AL++     + + + E +  QIE +IF        +YK RVR+R+ NL+D  N  LR++VL+G +SA  +A M++E+MASDE++E RK    E I   Q+  +GGTE+DL  C KCR+ +C+Y QVQTRSADEPMTTF +CN CG+RWKFC
Sbjct:   11 LDLLKELQAIPMTLGILKMTRVGMLVNSLRKLTKDEEVISISKILIKTWKKLLEALVRPFFLNGESLISTRIIAREVQCSKALEMWQPDNNSGPEGKHCERGGGGDRRRAETKPPSTPSTPSTPTTPTSPSAPGTPRSPAFPSAGTSSEVVREKCREMLAAALKTNDDYVKYAANCELIGAQIEDSIFQELPAVDQKYKNRVRSRISNLKDPKNPNLRISVLTGAISASCMAKMTAEEMASDELREKRKAMTEEAIRAHQMAKTGGTETDLFSCGKCRKKRCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 322
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009590.1 (pep scaffold:Pmarinus_7.0:GL476748:355926:357422:-1 gene:ENSPMAG00000008672.1 transcript:ENSPMAT00000009590.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 84.7297 bits (208), Expect = 1.616e-18
Identity = 47/143 (32.87%), Postives = 74/143 (51.75%), Query Frame = 3 
Query:  588 LSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCV-SGGTESDLIKCPKCRESKCSYN-----------QVQTRSADEPMTTFAYCNSCGHRW 980
            L+ +IE AIF +  +   +Y+  +R+++ NLR   N EL   V +G VS  + A M+ E+MA  E++ +R  Y    + E QL    GGT +D ++C +C +  CS +            V+  S DE + TF  C  CG +W
Sbjct:  169 LAKEIERAIFGLHPSVDKKYRACLRSKIANLRHPQNGELAGRVRAGAVSPARFAAMTPEEMACSELRHLRNSYQQAALREHQLPHRPGGTPTDRVRCRRCGKFNCSVSVVCRGTLFIPGWVRGDSPDEQLMTFLTCEECGEKW 311
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003514.1 (pep scaffold:Pmarinus_7.0:GL476382:909500:922223:-1 gene:ENSPMAG00000003206.1 transcript:ENSPMAT00000003514.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 46.595 bits (109), Expect = 6.588e-6
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 3 
Query:  597 QIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRK---KYMGEVIHESQ 833
            +IE  ++  F ++  +YK + R+ + NL+D  N  L   VL   +   KL  MS E++AS E+ E R+   K+  E+I + Q
Sbjct:  230 EIEKELYAQFQDTDSKYKNKYRSLMFNLKDARNHGLFRRVLKREIPPHKLVRMSPEELASKELAEWRERENKHTLEMIEKEQ 311
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Yeast
Match: DST1 (General transcription elongation factor TFIIS; enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites; maintains RNAPII elongation activity on ribosomal protein genes during conditions of transcriptional stress [Source:SGD;Acc:S000003011])

HSP 1 Score: 104.76 bits (260), Expect = 1.370e-25
Identity = 85/315 (26.98%), Postives = 154/315 (48.89%), Query Frame = 3 
Query:   69 KILESNKEDPETIIKYMERLSN-IEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDS--FRIKARSMISQAL------ESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKF 986
            K LE NK +   +++ +  L      T  +L +T +G+ +NKF KK  +  +  + K++I  WK  +   K +++ +         ++E+ ++  E +NG ++     S++  ++   S+              KP   +N D  D+  +  K R  + +AL      ES H P+    T   +++ E    N    +   YK R R    N+  +NN +L+  + +G ++ E LA   ++D+A   +K+  ++   + ++ +Q      + +D   C KC+E K SY Q+QTRSADEP+TTF  C +CG+RWKF
Sbjct:   11 KNLEKNKSNDAAVLEILHVLDKEFVPTEKLLRETKVGVEVNKF-KKSTNVEISKLVKKMISSWKDAINKNKRSRQAQQHHQDHAPGNAEDKTTVGESVNGVQQPASSQSDAMKQDKYVST--------------KPRNSKN-DGVDTAIYHHKLRDQVLKALYDVLAKESEHPPQSILHTAK-AIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Yeast
Match: RPC11 (RNA polymerase III subunit C11; mediates pol III RNA cleavage activity and is important for termination of transcription; homologous to TFIIS [Source:SGD;Acc:S000002452])

HSP 1 Score: 48.1358 bits (113), Expect = 1.359e-7
Identity = 22/41 (53.66%), Postives = 26/41 (63.41%), Query Frame = 3 
Query:  870 KCPK---CRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK 983
            +CP    C      + Q+Q RSADEPMTTF  C +CGHRWK
Sbjct:   68 QCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWK 108
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Yeast
Match: RPA12 (RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex; physically interacts with transcriptional activator Msn4p, to regulate transcription of AYR1, a gene involved in lipid metabolism [Source:SGD;Acc:S000003824])

HSP 1 Score: 43.5134 bits (101), Expect = 7.660e-6
Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = 3 
Query:  870 KCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK 983
            KCP+C   + +Y+ +Q RSADE  T F  C SCG++++
Sbjct:   85 KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFR 122
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Nematostella
Match: EDO32793 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU34])

HSP 1 Score: 202.216 bits (513), Expect = 1.782e-61
Identity = 122/319 (38.24%), Postives = 182/319 (57.05%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKE-DPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            E+  +I K+L+KI+  +    PE  +  + +L ++ +TL  L KT IG+ +N  RKK  + +V  +AK LIK WKKL+P                    E   S+ +  NG+      S  ++   S  S    + +    N   KP+   NT T +S R K R MI  +L+     E     E ++   E  IF  F ++  +YKQR+R+RV NLRD  N  L++ VL G +S  +LAVM+SE+MASDEMK++R+++  E I E+Q+  + GT+++L KC +C + + +YNQ+QTRSADEPMTTF YC +CG+RWKFC
Sbjct:    5 EEVCRIGKQLEKIVSQDSAMVPEEAVDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSNNSNVQTLAKSLIKLWKKLLP--------------------EKSGSDKKADNGKASSEKSSRSTSPALSTKSDTSDAPTTPKDN---KPISFPNTITDESVRGKCREMIVNSLQVQGEFEAVTKPEEVAAACEQLIFEEFKDTNVKYKQRIRSRVNNLRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEMKKLRQEFTKEGIREAQMAKNAGTKTNLFKCGRCGKRETTYNQLQTRSADEPMTTFVYCMNCGNRWKFC 300
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Nematostella
Match: EDO31766 (DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL;Acc:A7SWZ1])

HSP 1 Score: 57.7658 bits (138), Expect = 1.312e-10
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 3 
Query:  870 KCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWK 983
            +CPKC  ++  + Q+QTRSADEPMTTF  C SCG+RWK
Sbjct:   70 RCPKCDHNRAYFMQIQTRSADEPMTTFYKCCSCGNRWK 107
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Medaka
Match: tcea1 (transcription elongation factor A1 [Source:NCBI gene;Acc:101161091])

HSP 1 Score: 189.889 bits (481), Expect = 4.093e-56
Identity = 89/173 (51.45%), Postives = 120/173 (69.36%), Query Frame = 3 
Query:  477 FQRNTDTTDSFRIKARSMISQALESG--HVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            F R   T+DS R+K R M++ AL++G  ++  G+ D E L  QIE  IF  F N+  +YK RVR+R+ NL+D  N  LR  VL G+VS E++A M++E+MASDE+KEMRK    E + + Q+  +GGT++DL  C KC+   C+Y QVQTRSADEPMTTF +CN CG+RWKFC
Sbjct:  140 FPRAPSTSDSIRLKCREMLANALQTGEDYIAIGA-DCEELGAQIEECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNQCGNRWKFC 311

HSP 2 Score: 54.6842 bits (130), Expect = 7.558e-8
Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLV 266
            E+  +I+K++ K+  + K++    +  ++ L NI M+L +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+
Sbjct:    7 EEIIRIAKKMDKM--AQKKNGAGALDLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 81
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Medaka
Match: tcea2 (transcription elongation factor A protein 2 [Source:NCBI gene;Acc:101158359])

HSP 1 Score: 175.637 bits (444), Expect = 9.970e-51
Identity = 85/177 (48.02%), Postives = 116/177 (65.54%), Query Frame = 3 
Query:  462 PPKPVFQRNTDTTDSFRIKARSMISQALESGH-VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            PP PV      T+DS R K R ++  AL++         D ++L+ QIE  IF  F ++  +YK R+R+R+ NL+DQ N +LR NVL G +SA+++A M++E+MAS E+K++R+    E I E QL   GGTE+D+  C KC    C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:  139 PPAPV------TSDSVRNKCRELLVAALQTDDDYKTIGVDCDHLAAQIEHQIFQEFKSTDMKYKARLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAELKQIREALTKESIREHQLSKVGGTETDMFICSKCHGKNCTYTQVQTRSADEPMTTFVLCNGCGNRWKFC 309

HSP 2 Score: 54.299 bits (129), Expect = 1.034e-7
Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 3 
Query:   48 KISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLV 266
            +I+K+L K+++  KE+ E  +  ++ L NI+M+L  L  T +G+ +N  RK+  D  V  +AK LIK WK+L+
Sbjct:    9 RIAKKLDKMVQ--KENTEGALDLLKELQNIKMSLETLQSTRVGMSVNAVRKQSSDEEVQTLAKSLIKSWKRLL 79
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Medaka
Match: tcea2 (transcription elongation factor A protein 2 [Source:NCBI gene;Acc:101158359])

HSP 1 Score: 174.866 bits (442), Expect = 1.597e-50
Identity = 85/177 (48.02%), Postives = 116/177 (65.54%), Query Frame = 3 
Query:  462 PPKPVFQRNTDTTDSFRIKARSMISQALESGH-VPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            PP PV      T+DS R K R ++  AL++         D ++L+ QIE  IF  F ++  +YK R+R+R+ NL+DQ N +LR NVL G +SA+++A M++E+MAS E+K++R+    E I E QL   GGTE+D+  C KC    C+Y QVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:  137 PPAPV------TSDSVRNKCRELLVAALQTDDDYKTIGVDCDHLAAQIEHQIFQEFKSTDMKYKARLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAELKQIREALTKESIREHQLSKVGGTETDMFICSKCHGKNCTYTQVQTRSADEPMTTFVLCNGCGNRWKFC 307
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Medaka
Match: tcea1 (transcription elongation factor A1 [Source:NCBI gene;Acc:101161091])

HSP 1 Score: 169.474 bits (428), Expect = 1.587e-48
Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 3 
Query:  477 FQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            F R   T+DS R+K R M++ AL++G  P        L  +++      F N+  +YK RVR+R+ NL+D  N  LR  VL G+VS E++A M++E+MASDE+KEMRK    E + + Q+  +GGT++DL  C KC+   C+Y QVQTRSADEPMTTF +CN CG+RWK C
Sbjct:  140 FPRAPSTSDSIRLKCREMLANALQTGGHP-------VLLCRLQLCF--QFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNQCGNRWKVC 301

HSP 2 Score: 54.6842 bits (130), Expect = 8.575e-8
Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLV 266
            E+  +I+K++ K+  + K++    +  ++ L NI M+L +L  T IG+ +N  RK+  D  V ++AK LIK WKKL+
Sbjct:    7 EEIIRIAKKMDKM--AQKKNGAGALDLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 81
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Medaka
Match: tcea3 (transcription elongation factor A protein 3 [Source:NCBI gene;Acc:101173248])

HSP 1 Score: 161.77 bits (408), Expect = 2.062e-44
Identity = 77/166 (46.39%), Postives = 108/166 (65.06%), Query Frame = 3 
Query:  495 TTDSFRIKARSMISQALESGHV-PEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            T DS R K   M++ AL +     E   + + +  +IE  I+     +  +YK RVR+R+ NL+D  N  LR NVL+G++   ++A MS+E+MASDE+K++R     E I E Q+  +GGT +DL++C KC +  C+YNQVQTRSADEPMTTF  CN CG+RWKFC
Sbjct:  263 TGDSIRDKCIEMLAAALRTDDDHKEFGVNCDSMGAEIEDYIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCNKKNCTYNQVQTRSADEPMTTFVLCNECGYRWKFC 428

HSP 2 Score: 63.5438 bits (153), Expect = 1.820e-10
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 3 
Query:   36 EDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKT 281
            ED  +I+K+L K++  N    E  +  ++ L +++MTL +L +T IG+ +N  RK C D  VI++AK LIK WK+L+ +  T
Sbjct:    5 EDLVRIAKKLDKMVSRN--STEGALDLLKELRSLKMTLKLLQETRIGMSVNSIRKHCTDEEVISLAKLLIKDWKRLLDSGPT 84
[Close]
BLAST of Transcription elongation factor A protein 1 vs. Planmine SMEST
Match: SMESG000027575.1 (SMESG000027575.1)

HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 3 
Query:   33 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNXXXXXXXXXXXXENGSSEDEKLNGEKRIRLXXXXXXXXXXXXXXXXXXXXXXXXXHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 989
            MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNRPSDDHSPSRDSENGSSEDEKLNGEKRIRLESSESANENSNHSSIISSRSKDSSNHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC
Sbjct:    1 MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLIINKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNRPSDDHSPSRDSENGSSEDEKLNGEKRIRLESSESANENSNHSSIISSRSKDSSNHPPKPVFQRNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMNSGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDEMKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSADEPMTTFAYCNSCGHRWKFC 319
The following BLAST results are available for this feature:
BLAST of Transcription elongation factor A protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TCEA21.718e-6740.31transcription elongation factor A2 [Source:HGNC Sy... [more]
TCEA21.409e-6441.22transcription elongation factor A2 [Source:HGNC Sy... [more]
TCEA11.739e-6439.13transcription elongation factor A1 [Source:HGNC Sy... [more]
TCEA11.629e-6338.82transcription elongation factor A1 [Source:HGNC Sy... [more]
TCEA21.849e-6240.82transcription elongation factor A2 [Source:HGNC Sy... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
T24H10.12.105e-6438.13Putative transcription elongation factor S-II [So... [more]
rpc-118.352e-853.85DNA-directed RNA polymerase subunit [Source:UniPr... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4
Match NameE-valueIdentityDescription
TfIIS4.145e-5852.44gene:FBgn0010422 transcript:FBtr0332475[more]
TfIIS4.145e-5852.44gene:FBgn0010422 transcript:FBtr0080722[more]
CG81175.292e-4142.14gene:FBgn0030663 transcript:FBtr0074050[more]
CG337855.986e-650.00gene:FBgn0061362 transcript:FBtr0091786[more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tcea23.584e-6238.68transcription elongation factor A (SII), 2 [Source... [more]
tcea14.698e-5354.02transcription elongation factor A (SII), 1 [Source... [more]
tcea16.248e-5153.49transcription elongation factor A (SII), 1 [Source... [more]
tcea35.093e-4445.78transcription elongation factor A (SII), 3 [Source... [more]
tcea33.175e-1038.10transcription elongation factor A (SII), 3 [Source... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tcea17.621e-6838.34transcription elongation factor A (SII), 1 [Source... [more]
tcea13.571e-6137.00transcription elongation factor A (SII), 1 [Source... [more]
cfap477.181e-4354.31chromosome X open reading frame 22 [Source:Xenbase... [more]
tceanc1.782e-1527.49transcription elongation factor A (SII) N-terminal... [more]
csgalnact13.694e-858.97chondroitin sulfate N-acetylgalactosaminyltransfer... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Tcea21.211e-6338.44transcription elongation factor A (SII), 2 [Source... [more]
Tcea24.948e-6239.67transcription elongation factor A (SII), 2 [Source... [more]
Tcea11.097e-6140.88transcription elongation factor A (SII) 1 [Source:... [more]
Tcea28.262e-6139.46transcription elongation factor A (SII), 2 [Source... [more]
Tcea17.073e-5451.45transcription elongation factor A (SII) 1 [Source:... [more]
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BLAST of Transcription elongation factor A protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q15560|TCEA2_HUMAN8.253e-6740.31Transcription elongation factor A protein 2 OS=Hom... [more]
sp|Q29RL9|TCEA1_BOVIN1.470e-6438.51Transcription elongation factor A protein 1 OS=Bos... [more]
sp|P23193|TCEA1_HUMAN8.353e-6439.13Transcription elongation factor A protein 1 OS=Hom... [more]
sp|Q148K0|TCEA2_BOVIN2.027e-6339.38Transcription elongation factor A protein 2 OS=Bos... [more]
sp|P52652|TFS2_CAEEL2.678e-6338.13Putative transcription elongation factor S-II OS=C... [more]
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BLAST of Transcription elongation factor A protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2KM503.201e-10150.00Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A0X3PQS61.278e-9951.86Uncharacterized protein OS=Schistocephalus solidus... [more]
A0A1S8WLU61.434e-9951.08Transcription elongation factor S-II (Fragment) OS... [more]
C1LE557.628e-9848.34RNA polymerase II elongation factor OS=Schistosoma... [more]
A0A504YEY17.641e-9848.62Transcription elongation factor S-II OS=Fasciola g... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tcea11.852e-5550.00transcription elongation factor A1 [Source:NCBI ge... [more]
tcea22.057e-5338.15transcription elongation factor A (SII), 2 [Source... [more]
tcea21.039e-5039.71transcription elongation factor A (SII), 2 [Source... [more]
tcea12.871e-5046.96transcription elongation factor A1 [Source:NCBI ge... [more]
tcea36.393e-4445.78transcription elongation factor A protein 3-like [... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4
Match NameE-valueIdentityDescription
tcea21.583e-6242.47transcription elongation factor A (SII), 2 [Source... [more]
tcea35.173e-5635.90transcription elongation factor A (SII), 3 [Source... [more]
ENSPMAT00000009590.11.616e-1832.87pep scaffold:Pmarinus_7.0:GL476748:355926:357422:-... [more]
ENSPMAT00000003514.16.588e-632.93pep scaffold:Pmarinus_7.0:GL476382:909500:922223:-... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
DST11.370e-2526.98General transcription elongation factor TFIIS; ena... [more]
RPC111.359e-753.66RNA polymerase III subunit C11; mediates pol III R... [more]
RPA127.660e-644.74RNA polymerase I subunit A12.2; contains two zinc ... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO327931.782e-6138.24Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO317661.312e-1063.16DNA-directed RNA polymerase subunit [Source:UniPr... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tcea14.093e-5651.45transcription elongation factor A1 [Source:NCBI ge... [more]
tcea29.970e-5148.02transcription elongation factor A protein 2 [Sourc... [more]
tcea21.597e-5048.02transcription elongation factor A protein 2 [Sourc... [more]
tcea11.587e-4847.37transcription elongation factor A1 [Source:NCBI ge... [more]
tcea32.062e-4446.39transcription elongation factor A protein 3 [Sourc... [more]
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BLAST of Transcription elongation factor A protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000027575.10.000e+0100.00SMESG000027575.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30015957 ID=SMED30015957|Name=Transcription elongation factor A protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1428bp
AAATTTGAGACGCTTATTTGTAACTTATTGTAATGGAAGATACTTTCAAG
ATTAGTAAAAGATTACAAAAGATTTTAGAATCTAACAAAGAAGATCCTGA
AACAATTATAAAATACATGGAAAGATTAAGTAACATAGAAATGACATTAA
ATATTCTTACTAAAACCGGAATTGGATTGATTATTAATAAATTTCGTAAG
AAATGTAAAGATTGTTCTGTTATTGCAGTTGCAAAACAATTAATTAAACA
ATGGAAGAAACTAGTACCTAATGCTAAAACCACTAAAAGAAACAGACCAA
GTGATGACCATTCTCCTTCCAGGGATAGTGAAAATGGTTCTAGCGAAGAT
GAGAAACTTAATGGTGAAAAACGAATACGTTTAGAATCTTCTGAATCTGC
TAATGAAAACAGCAATCATAGCAGTATTATCAGTTCTAGATCCAAAGACA
GTTCAAATCATCCACCTAAACCAGTTTTCCAGCGTAACACAGACACAACA
GATTCATTCAGAATCAAAGCTCGATCGATGATAAGTCAAGCGCTAGAAAG
TGGACACGTTCCGGAAGGGTCATTCGACACGGAATATCTCTCAGTCCAGA
TCGAGACAGCTATATTCAACGTGTTCATGAATTCGGGGCCTCAATATAAA
CAGCGAGTGCGAACGCGGGTGATGAATCTACGGGACCAGAACAATGTGGA
ATTAAGACTCAACGTTTTATCCGGCACTGTTTCGGCTGAGAAACTTGCGG
TGATGTCATCTGAGGACATGGCAAGTGACGAAATGAAGGAAATGCGTAAG
AAATATATGGGAGAAGTAATTCACGAATCCCAGCTTTGCGTTAGTGGTGG
CACAGAGTCTGACCTCATCAAGTGTCCGAAATGCCGAGAATCGAAATGCT
CATACAATCAAGTGCAAACTCGAAGCGCAGATGAACCGATGACAACCTTT
GCTTATTGTAACAGTTGCGGTCACCGATGGAAGTTCTGCTAAAATCGGTC
GTGGTGGGTGCTCGAGGCAATCTGCAAGTATTCGTACAGCTCAGTTGCAA
CTACCCGCTAAATCGTCATGTAAATTTATCCTTGATTAGAATTATATGTA
TATTATTGGTTTTGATTTCGTGTCGTTCTAGCTGGTCTTTTACTGCATTT
TGATTTGTTAATTTGTGTGCGCTTCTGTGATTGTATGCATGTCTGTGGTT
GTGTGTATTATGAGTATTGTTATCACCGCAATAATTGTCATATTCTGATC
AAATGTCAATCGTACCAATATTCGGATTATCCGATGCCGTCGATTGGTCT
GTAAGTGTTATTAATATTTCCAGATCCGATAGAGCTATGCAAATTCGGTT
GGATATCTGTCCACTTTTACGTAATAAATGTGAATTGGTGCGATTTTAAA
AAATAAAATGTTTGACATTGAAAAAAAA
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protein sequence of SMED30015957-orf-1

>SMED30015957-orf-1 ID=SMED30015957-orf-1|Name=SMED30015957-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=320bp
MEDTFKISKRLQKILESNKEDPETIIKYMERLSNIEMTLNILTKTGIGLI
INKFRKKCKDCSVIAVAKQLIKQWKKLVPNAKTTKRNRPSDDHSPSRDSE
NGSSEDEKLNGEKRIRLESSESANENSNHSSIISSRSKDSSNHPPKPVFQ
RNTDTTDSFRIKARSMISQALESGHVPEGSFDTEYLSVQIETAIFNVFMN
SGPQYKQRVRTRVMNLRDQNNVELRLNVLSGTVSAEKLAVMSSEDMASDE
MKEMRKKYMGEVIHESQLCVSGGTESDLIKCPKCRESKCSYNQVQTRSAD
EPMTTFAYCNSCGHRWKFC*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000142posterior region of the whole animal
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR035100TF_IIS-typ
IPR006289TFSII
IPR036575TFIIS_cen_dom_sf
IPR003617TFIIS/CRSP70_N_sub
IPR001222Znf_TFIIS
IPR003618TFIIS_cen_dom
IPR016492TF_IIS-rel
IPR017923TFIIS_N
Vocabulary: biological process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0032784regulation of DNA-templated transcription, elongation
GO:0006357regulation of transcription from RNA polymerase II promoter
GO:0006355regulation of transcription, DNA-templated
GO:0006414translational elongation
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003677DNA binding
GO:0003746translation elongation factor activity
GO:0046872metal ion binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 279..318
e-value: 6.0E-19
score: 78.9
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 279..317
e-value: 4.6E-18
score: 64.8
IPR001222Zinc finger, TFIIS-typePROSITEPS00466ZF_TFIIS_1coord: 281..316
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 277..317
score: 14.095
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeSMARTSM00509TFS2_5coord: 4..80
e-value: 6.3E-15
score: 65.6
IPR003618Transcription elongation factor S-II, central domainSMARTSM00510mid_6coord: 157..257
e-value: 8.2E-32
score: 121.7
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 157..265
e-value: 6.8E-29
score: 100.6
IPR003618Transcription elongation factor S-II, central domainPROSITEPS51321TFIIS_CENTRALcoord: 159..274
score: 26.585
IPR035441TFIIS/LEDGF domain superfamilyGENE3DG3DSA:1.20.930.10coord: 1..94
e-value: 2.6E-21
score: 77.2
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILYSSF47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 3..93
IPR035100Transcription elongation factor, IIS-typePIRSFPIRSF006704TFIIScoord: 1..319
e-value: 1.0E-87
score: 292.2
NoneNo IPR availableGENE3DG3DSA:2.20.25.10coord: 271..319
e-value: 3.8E-25
score: 89.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..120
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 2..319
NoneNo IPR availablePANTHERPTHR11477:SF3TRANSCRIPTION ELONGATION FACTOR A PROTEIN 2coord: 2..319
NoneNo IPR availableCDDcd13749Zn-ribbon_TFIIScoord: 272..318
e-value: 8.39847E-25
score: 92.6689
NoneNo IPR availableCDDcd00183TFIIS_Icoord: 2..78
e-value: 5.5926E-14
score: 64.2518
NoneNo IPR availableSUPERFAMILYSSF57783Zinc beta-ribboncoord: 278..317
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 28..78
e-value: 3.5E-10
score: 39.7
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 1..81
score: 17.857
IPR006289Transcription elongation factor, TFIISTIGRFAMTIGR01385TIGR01385coord: 3..319
e-value: 1.8E-78
score: 262.2
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3DG3DSA:1.10.472.30coord: 149..259
e-value: 1.0E-29
score: 105.1
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILYSSF46942Elongation factor TFIIS domain 2coord: 142..250