Ran GTPase-activating protein 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30015929 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Human
Match: RANGAP1 (Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]) HSP 1 Score: 194.512 bits (493), Expect = 7.798e-53 Identity = 120/329 (36.47%), Postives = 193/329 (58.66%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E+ + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL++EI AL SL GL+ A LVELDLSDNAFGP+GV G LL SS C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI GI L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E+L Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEI-EDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRV-IGTLEEVHMPQNGINHPGITA---LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD-KAELEKLDLNGNTLGEEGCEQLQEVL 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Human
Match: RANGAP1 (Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]) HSP 1 Score: 194.512 bits (493), Expect = 7.798e-53 Identity = 120/329 (36.47%), Postives = 193/329 (58.66%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E+ + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL++EI AL SL GL+ A LVELDLSDNAFGP+GV G LL SS C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI GI L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E+L Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEI-EDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRV-IGTLEEVHMPQNGINHPGITA---LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD-KAELEKLDLNGNTLGEEGCEQLQEVL 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Human
Match: RANGAP1 (Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]) HSP 1 Score: 194.512 bits (493), Expect = 7.798e-53 Identity = 120/329 (36.47%), Postives = 193/329 (58.66%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E+ + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL++EI AL SL GL+ A LVELDLSDNAFGP+GV G LL SS C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI GI L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E+L Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEI-EDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRV-IGTLEEVHMPQNGINHPGITA---LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD-KAELEKLDLNGNTLGEEGCEQLQEVL 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Human
Match: RANGAP1 (Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]) HSP 1 Score: 117.857 bits (294), Expect = 4.922e-29 Identity = 85/288 (29.51%), Postives = 142/288 (49.31%), Query Frame = 2 Query: 224 LGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 +GV AA + + L ++++++ W+D+FTGRL++EI AL SL GL+ A LVELDLSDNAFGP+GV G LL SS C+TL+ L +NN G+G G + + +L+++ + QNGI GI L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E+L Sbjct: 2 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVI--------------------------------------------GTLEEVHMPQNGINHPGITA---LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD-KAELEKLDLNGNTLGEEGCEQLQEVL 241
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Human
Match: RANGAP1 (Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]) HSP 1 Score: 105.145 bits (261), Expect = 7.044e-26 Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVG 436 LS+ G + NT ED + V+K++ E+ + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL++EI AL SL GL+ A LVELDLSDNAFGP+GV G Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEI-EDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQG 131
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Celegans
Match: ran-2 (Ran GTPase-activating protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34342]) HSP 1 Score: 181.415 bits (459), Expect = 1.957e-47 Identity = 113/291 (38.83%), Postives = 168/291 (57.73%), Query Frame = 2 Query: 137 NTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQG---CRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLN-QMSLNLKTVSVSGNEITGHCAIKFISK 997 +T E E VVK + + + L+L GNTLG+ A + + L + ++++ +W+DLFTGRLK+EI L +L +M A + ELDLSDNAFGP G + +LL S ++L+ L +NN GLG G + L + L+K+ + L+ FIAGRNRLEN G L F + +++ + QNGI GI+ L+ +LK++ NL+ L + DNT+ P+G K L+K L + LE L L DCLI+++G ++ LN Q +LK V + GNE+T A I K Sbjct: 423 DTAESAEPVVKVIAA-ASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLKNEIPPILEALGKAMMTAGCKIKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFK-ALETVEWFDVRQNGIHEEGIRA---LVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHRHLKNVYLCGNELTPPVAKLLIQK 708 HSP 2 Score: 152.14 bits (383), Expect = 6.716e-38 Identity = 106/295 (35.93%), Postives = 166/295 (56.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQG-------CRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLN-LKTVSVSGNEIT 967 LS+ G Q + +TEE+I V+ + +++N + L GNTL V A + + E L + ++++ IW+D+FTGRLK EI + L +L L + L LDLSDNAFG + L S Y+L+ L +NN GLG G C L+DA KKA + L+ F+ GRNRLE L++ F + +L++I L QNGI GI L + + + L++++I+DN PEG ++S++L + +E L LGDC+ + G+ + L++++ + LK V +SGN IT Sbjct: 7 LSFFGKQLKLDTEEEISKVIDQIRKHLN-LEVLDFRGNTLSVLAGKLIAESLKTRRELKECIWSDMFTGRLKDEIPLVLDALGEALTASGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLGLAGKTVGKALC-SLIDASKKAGTP-----LKLKKFVCGRNRLEVESTIALSDAFIK-LGTLEEIRLPQNGIRDDGIIA---LAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT 290
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Celegans
Match: ran-2 (Ran GTPase-activating protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34342]) HSP 1 Score: 181.8 bits (460), Expect = 1.961e-47 Identity = 113/291 (38.83%), Postives = 168/291 (57.73%), Query Frame = 2 Query: 137 NTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQG---CRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLN-QMSLNLKTVSVSGNEITGHCAIKFISK 997 +T E E VVK + + + L+L GNTLG+ A + + L + ++++ +W+DLFTGRLK+EI L +L +M A + ELDLSDNAFGP G + +LL S ++L+ L +NN GLG G + L + L+K+ + L+ FIAGRNRLEN G L F + +++ + QNGI GI+ L+ +LK++ NL+ L + DNT+ P+G K L+K L + LE L L DCLI+++G ++ LN Q +LK V + GNE+T A I K Sbjct: 460 DTAESAEPVVKVIAA-ASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLKNEIPPILEALGKAMMTAGCKIKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFK-ALETVEWFDVRQNGIHEEGIRA---LVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHRHLKNVYLCGNELTPPVAKLLIQK 745 HSP 2 Score: 152.525 bits (384), Expect = 5.747e-38 Identity = 106/295 (35.93%), Postives = 166/295 (56.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQG-------CRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLN-LKTVSVSGNEIT 967 LS+ G Q + +TEE+I V+ + +++N + L GNTL V A + + E L + ++++ IW+D+FTGRLK EI + L +L L + L LDLSDNAFG + L S Y+L+ L +NN GLG G C L+DA KKA + L+ F+ GRNRLE L++ F + +L++I L QNGI GI L + + + L++++I+DN PEG ++S++L + +E L LGDC+ + G+ + L++++ + LK V +SGN IT Sbjct: 44 LSFFGKQLKLDTEEEISKVIDQIRKHLN-LEVLDFRGNTLSVLAGKLIAESLKTRRELKECIWSDMFTGRLKDEIPLVLDALGEALTASGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLGLAGKTVGKALC-SLIDASKKAGTP-----LKLKKFVCGRNRLEVESTIALSDAFIK-LGTLEEIRLPQNGIRDDGIIA---LAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT 327
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Fly
Match: RanGAP (gene:FBgn0003346 transcript:FBtr0334175) HSP 1 Score: 206.838 bits (525), Expect = 1.193e-57 Identity = 122/280 (43.57%), Postives = 170/280 (60.71%), Query Frame = 2 Query: 134 WNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGM-EMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEI 964 WNT D++ VV LN+ V L L GNTLGV AA+ + E L + +K +W ++FTGRL SEI AL L L+ A L LDLSDNA GPNG+ G+ ELL S CY+L+ L + N GLG +G L AL N+N G + L VFI RNRLE+AG EM T F + + + ++IVL QN I I+GV+ L S K++ +L+VLN++DNT+K EG +++++ LP+ L E+ GDCLIK +G H + L + + L+ + + NEI Sbjct: 20 WNTAADVQDVVDALNKQTT-VHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQT--LKTFEEIVLEQNSI---YIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEI 293
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Fly
Match: RanGAP (gene:FBgn0003346 transcript:FBtr0081234) HSP 1 Score: 206.838 bits (525), Expect = 1.452e-57 Identity = 122/280 (43.57%), Postives = 169/280 (60.36%), Query Frame = 2 Query: 134 WNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGM-EMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEI 964 WNT D++ VV LN+ V L L GNTLGV AA+ + E L + +K +W ++FTGRL SEI AL L L+ A L LDLSDNA GPNG+ G+ ELL S CY+L+ L + N GLG +G L AL N+N G + L VFI RNRLE+AG EM T F + + ++IVL QN I I+GV+ L S K++ +L+VLN++DNT+K EG +++++ LP+ L E+ GDCLIK +G H + L + + L+ + + NEI Sbjct: 28 WNTAADVQDVVDALNKQTT-VHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAF--QTLKTFEEIVLEQNSI---YIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEI 301
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Fly
Match: RanGAP (gene:FBgn0003346 transcript:FBtr0334174) HSP 1 Score: 206.838 bits (525), Expect = 1.452e-57 Identity = 122/280 (43.57%), Postives = 169/280 (60.36%), Query Frame = 2 Query: 134 WNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGM-EMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEI 964 WNT D++ VV LN+ V L L GNTLGV AA+ + E L + +K +W ++FTGRL SEI AL L L+ A L LDLSDNA GPNG+ G+ ELL S CY+L+ L + N GLG +G L AL N+N G + L VFI RNRLE+AG EM T F + + ++IVL QN I I+GV+ L S K++ +L+VLN++DNT+K EG +++++ LP+ L E+ GDCLIK +G H + L + + L+ + + NEI Sbjct: 28 WNTAADVQDVVDALNKQTT-VHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAF--QTLKTFEEIVLEQNSI---YIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEI 301
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Zebrafish
Match: rangap1a (RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]) HSP 1 Score: 199.904 bits (507), Expect = 3.406e-55 Identity = 122/341 (35.78%), Postives = 201/341 (58.94%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAE---HDKLDAL 1114 LSY G + + + +E +VK++ E + L+L GNT+GV AA+ + + L N++ +Q W+D+FTGRL++EI AL SL L+ A L LDLSDNAFGP+GV G+ +LL S+ C+TL+ L +NN G+G G + L AL + S+ G L+VFIAGRNRLEN G L + F M SL+++ + QNGI G+ L +++++ L+VLN++DNT +G +++ L + +++ + GDCL+++ G L + + + LK +++S EI A++ +++ V+ K E +DL N + + +K+++ DKL +L Sbjct: 23 LSYKGKGLKLDNAQSVEQMVKEIGE-FEGLRALRLEGNTIGVEAAQTIAKALENKSDLQCCHWSDMFTGRLRAEIPPALVSLGDALILAGARLKVLDLSDNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALSECHQQSSALGAPFKLKVFIAGRNRLENDGATALAQAFQL-MGSLEEVHMPQNGINYPGVTA---LATAMQHNPQLRVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALAETVREGLPILKELNLSFGEIMEEAALE-VAQSVQHKDQFEKLDLNGNSLGEDGCKSLKQLMESINMADKLGSL 357
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Zebrafish
Match: rangap1b (Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]) HSP 1 Score: 195.282 bits (495), Expect = 1.956e-53 Identity = 126/338 (37.28%), Postives = 198/338 (58.58%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDAL 1114 LSY G + + E ++ +V+D+ E + +L+L GNTLGV AA+ + + L + ++++ W+D+FTGRL+SEI AL SL LM + L +LDLSDNAFGP+GV G+ LL SS CYTL+ L +NN G+G G L AL + S+ + L+VFIAGRNRLEN G L + F + SL+++ + QNGI GI L +LK++ NL+VLN++DNT +G K +++ + + + L+ + GDCL+++ G + L + L+ +++S EI A ++K V+ K +E +DL N + +KE + + + D L Sbjct: 23 LSYKGRGLKLDNAESVKEIVEDI-ERCQGLQSLRLEGNTLGVEAADAIAKSLEAKRELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALTECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKL-LGSLEEVHMPQNGINHPGITA---LAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRHLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLRELNLSFGEIC-EAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEKMNMEDLL 354
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Zebrafish
Match: rangap1b (Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]) HSP 1 Score: 195.282 bits (495), Expect = 2.129e-53 Identity = 126/338 (37.28%), Postives = 198/338 (58.58%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDAL 1114 LSY G + + E ++ +V+D+ E + +L+L GNTLGV AA+ + + L + ++++ W+D+FTGRL+SEI AL SL LM + L +LDLSDNAFGP+GV G+ LL SS CYTL+ L +NN G+G G L AL + S+ + L+VFIAGRNRLEN G L + F + SL+++ + QNGI GI L +LK++ NL+VLN++DNT +G K +++ + + + L+ + GDCL+++ G + L + L+ +++S EI A ++K V+ K +E +DL N + +KE + + + D L Sbjct: 23 LSYKGRGLKLDNAESVKEIVEDI-ERCQGLQSLRLEGNTLGVEAADAIAKSLEAKRELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALTECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKL-LGSLEEVHMPQNGINHPGITA---LAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRHLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLRELNLSFGEIC-EAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEKMNMEDLL 354
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Zebrafish
Match: rangap1b (Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]) HSP 1 Score: 159.073 bits (401), Expect = 6.459e-44 Identity = 94/220 (42.73%), Postives = 135/220 (61.36%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHIN 760 LSY G + + E ++ +V+D+ E + +L+L GNTLGV AA+ + + L + ++++ W+D+FTGRL+SEI AL SL LM + L +LDLSDNAFGP+GV G+ LL SS CYTL+ L +NN G+G G L AL + S+ + L+VFIAGRNRLEN G L + F + SL+++ + QNGI GI L +LK++ N Sbjct: 23 LSYKGRGLKLDNAESVKEIVEDI-ERCQGLQSLRLEGNTLGVEAADAIAKSLEAKRELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALTECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKL-LGSLEEVHMPQNGINHPGITA---LAAALKHNPN 237
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Zebrafish
Match: si:ch211-156p11.1 (si:ch211-156p11.1 [Source:ZFIN;Acc:ZDB-GENE-070912-120]) HSP 1 Score: 78.9518 bits (193), Expect = 1.675e-14 Identity = 94/358 (26.26%), Postives = 170/358 (47.49%), Query Frame = 2 Query: 140 TEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVA---LSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGN--------EITG-----HCAIK--------------FISKIV-ETKHIIESIDLTENEIKKVALNEIKEILAE-HDKLDALV 1117 TEE + L + + + L LS N L + ++L + L ++K++KL + SE S++ +L+ L HL+ELDL N G +GV +T+LL C TLKTL+++N + + L ALK S+ + +NL N++ N G+ ++ + D LK++ L + + + +++ S + +LK L++S+N ++ GVK LS L + LE+L L DC I G + L L +L + + GN E+T HC +K F++ +V E +++ ++L+E E+ +N++ +L + H +L+ L+ Sbjct: 883 TEESCSALALVLRSDSSSLKDLDLSNNNLQDSGVKRLSDVLK-ESKLEKLGF---------SECSISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKELTDLLQDPHC-TLKTLSLHNCSITEEHGENLTSALKSNP--SHLRELNL-----SGNQIRNTGVNLVCDVLKDSGCRLKRLRLSKCDLTEESCSALASVLRS--DSSSLKDLDLSNNNLQDSGVKLLSDELKDSK-LEKLSLSDCSISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKELTDLLQDPHCTLKTLRFLSPAADEFCQFVTGVVGENPLLLKELNLSERELGDTRVNQLSALLQDKHCRLNTLM 1219 HSP 2 Score: 60.8474 bits (146), Expect = 6.859e-9 Identity = 89/305 (29.18%), Postives = 141/305 (46.23%), Query Frame = 2 Query: 140 TEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSN---YKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKIL--PYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISK-IVETKHIIESIDL 1036 TEE + L + + + L LS N L + + L + L + +K++KL +D + E AL+S L HL+ELDL N GP+GV +T+LL C TL TL + +GC Q V + + N K +NL G R + L+ D +L ++L I G V + + S +H L+ LN+ +N + GVK LS +L P F+ L+ L L +C I E LT L NL+ +++S N + G +K ++ ++ET+ +E + L Sbjct: 1397 TEESCSALASVLRSDSSSLKNLDLSNNNLQDSGVKLLSDGLKD-SKLEKLSLSDC---SISEEGYKALAS---ALRSNPSHLIELDLRGNDPGPSGVKELTDLLQDPHC-TLNTLRFLSPA-ADEGC-QFVTGI----VGENPLLLKELNLSDRELGDTR-----VNQLSALLQDKHCTLNTLMLSSCKITDEGYSAVTSALKSNPSH--LRELNLRENKLGGFGVKNLSDLLMKPQFK-LKILDLYNCSITEEQCEILTSALKSNPTNLRELNLSWNNL-GDSGVKNLNNLLMETQFKLEKLHL 1678
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Xenopus
Match: tcf7l1 (transcription factor 7 like 1 [Source:Xenbase;Acc:XB-GENE-1031985]) HSP 1 Score: 195.282 bits (495), Expect = 3.107e-53 Identity = 121/329 (36.78%), Postives = 195/329 (59.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKA--RINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT +D E V++++ E+ + L+L GNT+G+ AA+ + + L + +++ W+D+FTGRL+SEI +L SL L+ A L ELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + + +S+ K + L+VFIAGRNRLEN G L E F + +L+++ + QNGI GI L S K + LKV+N++DNT +G +++ L +E + GDCL+++ G + + L + LK +++S EI A+ +++ VE + ++ +DL N + + +++EIL Sbjct: 40 LSFKGKSLKLNTAQDAEEVIREI-EDFEGLHALRLEGNTVGLEAAKAIAKVLEKKPDLKRCHWSDMFTGRLRSEIPPSLISLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECYKKSSSHGKPLALKVFIAGRNRLENDGATALAEAFRL-IGTLEEVHMPQNGINHAGITA---LAESFKANSLLKVINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIATALKEGLHKLKELNLSFCEIKRDAAV-VLAESVEDRSELQKLDLNGNCLGEGGCEQVQEIL 362
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Xenopus
Match: tcf7l1 (transcription factor 7 like 1 [Source:Xenbase;Acc:XB-GENE-1031985]) HSP 1 Score: 194.897 bits (494), Expect = 4.373e-53 Identity = 121/329 (36.78%), Postives = 195/329 (59.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKA--RINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT +D E V++++ E+ + L+L GNT+G+ AA+ + + L + +++ W+D+FTGRL+SEI +L SL L+ A L ELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + + +S+ K + L+VFIAGRNRLEN G L E F + +L+++ + QNGI GI L S K + LKV+N++DNT +G +++ L +E + GDCL+++ G + + L + LK +++S EI A+ +++ VE + ++ +DL N + + +++EIL Sbjct: 24 LSFKGKSLKLNTAQDAEEVIREI-EDFEGLHALRLEGNTVGLEAAKAIAKVLEKKPDLKRCHWSDMFTGRLRSEIPPSLISLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECYKKSSSHGKPLALKVFIAGRNRLENDGATALAEAFRL-IGTLEEVHMPQNGINHAGITA---LAESFKANSLLKVINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIATALKEGLHKLKELNLSFCEIKRDAAV-VLAESVEDRSELQKLDLNGNCLGEGGCEQVQEIL 346
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Xenopus
Match: tcf7l1 (transcription factor 7 like 1 [Source:Xenbase;Acc:XB-GENE-1031985]) HSP 1 Score: 194.126 bits (492), Expect = 4.963e-53 Identity = 121/329 (36.78%), Postives = 195/329 (59.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKA--RINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT +D E V++++ E+ + L+L GNT+G+ AA+ + + L + +++ W+D+FTGRL+SEI +L SL L+ A L ELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + + +S+ K + L+VFIAGRNRLEN G L E F + +L+++ + QNGI GI L S K + LKV+N++DNT +G +++ L +E + GDCL+++ G + + L + LK +++S EI A+ +++ VE + ++ +DL N + + +++EIL Sbjct: 24 LSFKGKSLKLNTAQDAEEVIREI-EDFEGLHALRLEGNTVGLEAAKAIAKVLEKKPDLKRCHWSDMFTGRLRSEIPPSLISLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECYKKSSSHGKPLALKVFIAGRNRLENDGATALAEAFRL-IGTLEEVHMPQNGINHAGITA---LAESFKANSLLKVINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIATALKEGLHKLKELNLSFCEIKRDAAV-VLAESVEDRSELQKLDLNGNCLGEGGCEQVQEIL 346
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Xenopus
Match: tcf7l1 (transcription factor 7 like 1 [Source:Xenbase;Acc:XB-GENE-1031985]) HSP 1 Score: 189.504 bits (480), Expect = 1.835e-51 Identity = 117/312 (37.50%), Postives = 186/312 (59.62%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKA--RINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDL 1036 LS+ G + NT +D E V++++ E+ + L+L GNT+G+ AA+ + + L + +++ W+D+FTGRL+SEI +L SL L+ A L ELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + + +S+ K + L+VFIAGRNRLEN G L E F + +L+++ + QNGI GI L S K + LKV+N++DNT +G +++ L +E + GDCL+++ G + + L + LK +++S EI A+ +++ VE + ++ +DL Sbjct: 24 LSFKGKSLKLNTAQDAEEVIREI-EDFEGLHALRLEGNTVGLEAAKAIAKVLEKKPDLKRCHWSDMFTGRLRSEIPPSLISLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECYKKSSSHGKPLALKVFIAGRNRLENDGATALAEAFRL-IGTLEEVHMPQNGINHAGITA---LAESFKANSLLKVINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIATALKEGLHKLKELNLSFCEIKRDAAV-VLAESVEDRSELQKLDL 329
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Xenopus
Match: tcf7l1 (transcription factor 7 like 1 [Source:Xenbase;Acc:XB-GENE-1031985]) HSP 1 Score: 107.842 bits (268), Expect = 3.704e-24 Identity = 66/193 (34.20%), Postives = 106/193 (54.92%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVL 685 LS+ G + NT +D E V++++ E+ + L+L GNT+G+ AA+ + + L + +++ W+D+FTGRL+SEI +L SL L+ A L ELDLSDNAFGP+GV G LL S +N+N+ +G + +ALK R +EV G + + G + + +G+ LK++ L Sbjct: 24 LSFKGKSLKLNTAQDAEEVIREI-EDFEGLHALRLEGNTVGLEAAKAIAKVLEKKPDLKRCHWSDMFTGRLRSEIPPSLISLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPAL-----INLNDNTFTEKGGIAMAEALKTLR--------QVEVINFGDCLVRSKGAQAIATALKEGLHKLKELNL 202
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Mouse
Match: Rangap1 (RAN GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:103071]) HSP 1 Score: 189.504 bits (480), Expect = 3.363e-51 Identity = 120/329 (36.47%), Postives = 192/329 (58.36%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL+SEI AL SL GL+ A LVELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI H GV L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E++ Sbjct: 23 LSFKGKGLKLNTAEDAKDVIKEIEE-FDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGI-IGTLEEVHMPQNGIN-H--PGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD-KAELEKLDLNGNALGEEGCEQLQEVM 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Mouse
Match: Rangap1 (RAN GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:103071]) HSP 1 Score: 189.504 bits (480), Expect = 3.363e-51 Identity = 120/329 (36.47%), Postives = 192/329 (58.36%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL+SEI AL SL GL+ A LVELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI H GV L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E++ Sbjct: 23 LSFKGKGLKLNTAEDAKDVIKEIEE-FDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGI-IGTLEEVHMPQNGIN-H--PGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD-KAELEKLDLNGNALGEEGCEQLQEVM 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Mouse
Match: Rangap1 (RAN GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:103071]) HSP 1 Score: 189.504 bits (480), Expect = 3.363e-51 Identity = 120/329 (36.47%), Postives = 192/329 (58.36%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL+SEI AL SL GL+ A LVELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI H GV L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E++ Sbjct: 23 LSFKGKGLKLNTAEDAKDVIKEIEE-FDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGI-IGTLEEVHMPQNGIN-H--PGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD-KAELEKLDLNGNALGEEGCEQLQEVM 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Mouse
Match: Rangap1 (RAN GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:103071]) HSP 1 Score: 170.244 bits (430), Expect = 1.233e-47 Identity = 101/235 (42.98%), Postives = 148/235 (62.98%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEG 805 LS+ G + NT ED + V+K++ E + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL+SEI AL SL GL+ A LVELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI H GV L + + L+V+N++DNT +G Sbjct: 23 LSFKGKGLKLNTAEDAKDVIKEIEE-FDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGI-IGTLEEVHMPQNGIN-H--PGVTALAQAFAINPLLRVINLNDNTFTEKG 252
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Mouse
Match: Rangap1 (RAN GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:103071]) HSP 1 Score: 117.087 bits (292), Expect = 4.066e-30 Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTL 475 LS+ G + NT ED + V+K++ E + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL+SEI AL SL GL+ A LVELDLSDNAFGP+GV G LL S C+TL Sbjct: 23 LSFKGKGLKLNTAEDAKDVIKEIEE-FDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTL 144
BLAST of Ran GTPase-activating protein 1 vs. UniProt/SwissProt
Match: sp|Q9VIW3|RAGP1_DROME (Ran GTPase-activating protein OS=Drosophila melanogaster OX=7227 GN=RanGAP PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.455e-56 Identity = 122/280 (43.57%), Postives = 169/280 (60.36%), Query Frame = 2 Query: 134 WNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGM-EMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEI 964 WNT D++ VV LN+ V L L GNTLGV AA+ + E L + +K +W ++FTGRL SEI AL L L+ A L LDLSDNA GPNG+ G+ ELL S CY+L+ L + N GLG +G L AL N+N G + L VFI RNRLE+AG EM T F + + ++IVL QN I I+GV+ L S K++ +L+VLN++DNT+K EG +++++ LP+ L E+ GDCLIK +G H + L + + L+ + + NEI Sbjct: 28 WNTAADVQDVVDALNKQTT-VHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAF--QTLKTFEEIVLEQNSI---YIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEI 301
BLAST of Ran GTPase-activating protein 1 vs. UniProt/SwissProt
Match: sp|O13066|RAGP1_XENLA (Ran GTPase-activating protein 1 OS=Xenopus laevis OX=8355 GN=rangap1 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.285e-55 Identity = 125/329 (37.99%), Postives = 192/329 (58.36%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT +D E V++++ E + L+L GNT+GV AA+ + E L + +++ W+D+FTGRL+ EI AL SL L+ A L ELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + S+ G + L+VFIAGRNRLEN G L+E F + +L+++ + QNGI GI L S K + LKV+N++DNT +G +++ L +E + GDCL+++ G + + L + LK +++S EI A+ +++ VE K +E +DL N + + +++EIL Sbjct: 23 LSFKGKTLKLNTAQDAEEVIREIEE-YEGLQALRLEGNTVGVEAAKAIAEVLQRKPDLKRCHWSDMFTGRLRPEIPTALRSLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALTECHKKSSAHGKPLALKVFIAGRNRLENDGATALSEAFRL-IGTLEEVHMPQNGINHAGITA---LAESFKANSLLKVINLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKDLNLSYCEIKADAAVS-LAESVEDKSDLEKLDLNGNCLGEEGCEQVQEIL 345
BLAST of Ran GTPase-activating protein 1 vs. UniProt/SwissProt
Match: sp|P46060|RAGP1_HUMAN (Ran GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RANGAP1 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.745e-52 Identity = 120/329 (36.47%), Postives = 193/329 (58.66%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E+ + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL++EI AL SL GL+ A LVELDLSDNAFGP+GV G LL SS C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI GI L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E+L Sbjct: 23 LSFKGKSLKLNTAEDAKDVIKEI-EDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRV-IGTLEEVHMPQNGINHPGITA---LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD-KAELEKLDLNGNTLGEEGCEQLQEVL 345
BLAST of Ran GTPase-activating protein 1 vs. UniProt/SwissProt
Match: sp|P46061|RAGP1_MOUSE (Ran GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 2.352e-50 Identity = 120/329 (36.47%), Postives = 192/329 (58.36%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LS+ G + NT ED + V+K++ E + + L+L GNT+GV AA + + L ++++++ W+D+FTGRL+SEI AL SL GL+ A LVELDLSDNAFGP+GV G LL S C+TL+ L +NN G+G G + L AL + S+ +G + L+VF+AGRNRLEN G L E F + +L+++ + QNGI H GV L + + L+V+N++DNT +G +++ L +E + GDCL+++ G + + LK +++S EI A+ + + K +E +DL N + + +++E++ Sbjct: 23 LSFKGKGLKLNTAEDAKDVIKEIEE-FDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGI-IGTLEEVHMPQNGIN-H--PGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD-KAELEKLDLNGNALGEEGCEQLQEVM 345
BLAST of Ran GTPase-activating protein 1 vs. UniProt/SwissProt
Match: sp|P34342|RGP2_CAEEL (Ran GTPase-activating protein 2 OS=Caenorhabditis elegans OX=6239 GN=ran-2 PE=4 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 2.495e-46 Identity = 113/291 (38.83%), Postives = 168/291 (57.73%), Query Frame = 2 Query: 137 NTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQG---CRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLN-QMSLNLKTVSVSGNEITGHCAIKFISK 997 +T E E VVK + + + L+L GNTLG+ A + + L + ++++ +W+DLFTGRLK+EI L +L +M A + ELDLSDNAFGP G + +LL S ++L+ L +NN GLG G + L + L+K+ + L+ FIAGRNRLEN G L F + +++ + QNGI GI+ L+ +LK++ NL+ L + DNT+ P+G K L+K L + LE L L DCLI+++G ++ LN Q +LK V + GNE+T A I K Sbjct: 460 DTAESAEPVVKVIAA-ASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLKNEIPPILEALGKAMMTAGCKIKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFK-ALETVEWFDVRQNGIHEEGIRA---LVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHRHLKNVYLCGNELTPPVAKLLIQK 745 HSP 2 Score: 152.525 bits (384), Expect = 7.311e-37 Identity = 106/295 (35.93%), Postives = 166/295 (56.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQG-------CRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLN-LKTVSVSGNEIT 967 LS+ G Q + +TEE+I V+ + +++N + L GNTL V A + + E L + ++++ IW+D+FTGRLK EI + L +L L + L LDLSDNAFG + L S Y+L+ L +NN GLG G C L+DA KKA + L+ F+ GRNRLE L++ F + +L++I L QNGI GI L + + + L++++I+DN PEG ++S++L + +E L LGDC+ + G+ + L++++ + LK V +SGN IT Sbjct: 44 LSFFGKQLKLDTEEEISKVIDQIRKHLN-LEVLDFRGNTLSVLAGKLIAESLKTRRELKECIWSDMFTGRLKDEIPLVLDALGEALTASGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLGLAGKTVGKALC-SLIDASKKAGTP-----LKLKKFVCGRNRLEVESTIALSDAFIK-LGTLEEIRLPQNGIRDDGIIA---LAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT 327
BLAST of Ran GTPase-activating protein 1 vs. TrEMBL
Match: A0A183A5Z9 (Uncharacterized protein OS=Echinostoma caproni OX=27848 PE=4 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 4.120e-85 Identity = 152/310 (49.03%), Postives = 213/310 (68.71%), Query Frame = 2 Query: 209 LSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSL--NLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDALVEDEAN 1132 LSGNTLG+ AAE + L N K+Q+ +W+DLFTGRLKSEI+ AL LS G++ + LVELDLSDNAFGPNGVVGV +L+AS C TL+ L MNNQGLGH+GCR L +AL+K R +S +G+ L+VF AGRNRLEN G ++L++ F D M SL+++ L QNGIGIHGI+GVD L+ +K++ NL+VLN+SDN++ +G K ++K L E+LEEL+L DC+++ SG+ + + L N++ ++++GNEIT I I + +K +E +DL NE K + I LA L L ++A+ Sbjct: 1 LSGNTLGITAAEPIGIALENNPKLQRCLWSDLFTGRLKSEIAPALRHLSSGIIASGARLVELDLSDNAFGPNGVVGVVDLIASPACSTLQILRMNNQGLGHEGCRHLTEALQKGRKSSGGRGLLLKVFCAGRNRLENYGAQLLSDVFCD-MGSLEEVALYQNGIGIHGIEGVDALVRMMKHNPNLRVLNLSDNSLTQKGGKAIAKALSSLENLEELHLSDCILRPSGVTAIARALEDPDTLPNIRVLNLTGNEITRSTGISLILSL-GSKSRLEFLDLNANEFGKSGIRAIIRTLASVGLLHVLPVNQAD 308
BLAST of Ran GTPase-activating protein 1 vs. TrEMBL
Match: A0A3P8G2K2 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS2384 PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 7.290e-85 Identity = 151/310 (48.71%), Postives = 213/310 (68.71%), Query Frame = 2 Query: 209 LSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSL--NLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDALVEDEAN 1132 +SGNTLG+ AAE + L N K+Q+ +W+DLFTGRLKSEI+ AL LS G++ + LVELDLSDNAFGPNGVVGV +L+AS C TL+ L MNNQGLGH+GCR L +AL+K R +S +G+ L+VF AGRNRLEN G ++L++ F D M SL+++ L QNGIGIHGI+GVD L+ +K++ NL+VLN+SDN++ +G K ++K L E+LEEL+L DC+++ SG+ + + L N++ ++++GNEIT I I + +K +E +DL NE K + I LA L L ++A+ Sbjct: 1 MSGNTLGITAAEPIGIALENNPKLQRCLWSDLFTGRLKSEIAPALRHLSSGIIASGARLVELDLSDNAFGPNGVVGVVDLIASPACSTLQILRMNNQGLGHEGCRHLTEALQKGRKSSGGRGLLLKVFCAGRNRLENYGAQLLSDVFCD-MGSLEEVALYQNGIGIHGIEGVDALVRMMKHNPNLRVLNLSDNSLTQKGGKAIAKALSSLENLEELHLSDCILRPSGVTAIARALEDPDTLPNIRVLNLTGNEITRSTGISLILSL-GSKSRLEFLDLNANEFGKSGIRAIIRTLASVGLLHVLPVNQAD 308
BLAST of Ran GTPase-activating protein 1 vs. TrEMBL
Match: A0A4E0RKC2 (Ran GTPase-activating protein 1 OS=Fasciola hepatica OX=6192 GN=D915_002760 PE=4 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 9.051e-85 Identity = 155/329 (47.11%), Postives = 223/329 (67.78%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSL--NLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 + ++GL + + +D+E +V+ L EN + + LSG+TLG+ AAE + L + TK+Q+ +W+DLFTGRLKSEI+ AL LS G+M + LVELDLSDNAFGPNGVVGV +L+AS C TL+ L MNNQGLGH+GCR LV+AL+K R S +G+ L+VF AGRNRLEN G ++L++ FSD M SL+++ L QNGIGIHGI+GV++L+ ++ + L++LN+SDNT+ +G K ++K L DLEEL+L DCL++ SG+ L + L L N++ ++++GNEI I I + K ++ +DL NE + I L Sbjct: 6 VDFSGLALKLDEPKDVEKIVEALVENPD-ASCFNLSGSTLGIAAAEPIGIALEHNTKLQRCLWSDLFTGRLKSEIAPALRHLSTGVMASGACLVELDLSDNAFGPNGVVGVVDLIASPACATLQILRMNNQGLGHEGCRHLVEALQKGRKASGGQGLRLKVFSAGRNRLENYGAQLLSDVFSD-MGSLEEVSLYQNGIGIHGIEGVNSLVKMMEKNAGLRILNLSDNTLTEKGGKAIAKALCSLPDLEELHLSDCLLRASGVAALARALEDPELVPNIRVLNLTGNEINRSIGISLILSL-GNKSKLQLLDLNANEFGTSGIQAIIRTL 331
BLAST of Ran GTPase-activating protein 1 vs. TrEMBL
Match: A0A504YLS8 (Ran GTPase-activating protein 1 OS=Fasciola gigantica OX=46835 GN=FGIG_04561 PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 3.191e-84 Identity = 154/329 (46.81%), Postives = 221/329 (67.17%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSL--NLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 + ++GL + + +D+E +V+ L N + LSG+TLG+ AAE + L + TK+Q+ +W+DLFTGRLKSEI+ AL LS G+M + LVELDLSDNAFGPNGV+GV +L+AS C TL+ L MNNQGLGH+GCR LV+AL+K R S +G+ L+VF AGRNRLEN G +L++ SD M SL+++ L QNGIGIHGI+GV++L+ ++ + L++LN+SDNT+ +G K ++K L DLEEL+LGDCL++ SG+ L + L L N++ ++++GNEI I I + E K ++ +DL NE + I L Sbjct: 6 VDFSGLALKLDEPKDVEKIVEALVGNPDAFC-FNLSGSTLGIAAAEPIGIALEHNTKLQRCLWSDLFTGRLKSEIAPALRHLSTGVMASGACLVELDLSDNAFGPNGVIGVVDLIASPACATLQILRMNNQGLGHEGCRHLVEALQKGRKASGGRGLRLKVFSAGRNRLENYGARLLSDVLSD-MGSLEEVSLYQNGIGIHGIEGVNSLVKMMEKNAGLRILNLSDNTLTEKGGKAIAKALCSLPDLEELHLGDCLLRASGVAALARALEDPELVPNIRVLNLTGNEINRSVGISLILSL-ENKSKLQLLDLNANEFGTSGIQAIIRTL 331
BLAST of Ran GTPase-activating protein 1 vs. TrEMBL
Match: A0A4S2MDX3 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_000693 PE=4 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 4.897e-84 Identity = 159/338 (47.04%), Postives = 224/338 (66.27%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLN--QMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDAL 1114 +++ GL + +T ED+ +V +L N VT L L+GNTLG+ A+E L L N K+++ I++DLFTGRLK+EI+ AL L G++ + HLVELDLSDNAFGPNGVVGV ELL+S C+TL+ L MNNQGLGH+GCR L AL+K R N G+ L+VF A RNRLEN G +ML + +D M SL+++ L QNGIGIHG G+ +L L + L++LN+SDNT+ EG K ++K L E LEEL+LGDC++++SG + L VL+ +++ +L+ +++SGNEIT + + + +K +ES+DL NE K + I L D L L Sbjct: 16 VTFAGLGLKLDTVEDVGFIVSELRSNTE-VTCLNLTGNTLGIVASEPLGAALENNKKLRRCIFSDLFTGRLKTEIAPALRHLCSGIISSGAHLVELDLSDNAFGPNGVVGVVELLSSPACFTLEVLRMNNQGLGHEGCRYLTQALEKGREACNRNGLALKVFSASRNRLENVGAQMLAKVLAD-MGSLEELSLCQNGIGIHGKDGMQSLSKILMANTKLRLLNLSDNTLTAEGGKIIAKALRSLEKLEELHLGDCILRSSGAQALAAVLDDPKVAPDLRVLNLSGNEITRQAGVSLVLSL-GSKSNLESLDLNANEFGKSGIQAIIRSLESIDLLHTL 350
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Cavefish
Match: rangap1b (ran GTPase-activating protein 1-like [Source:NCBI gene;Acc:103043879]) HSP 1 Score: 185.267 bits (469), Expect = 4.997e-50 Identity = 122/340 (35.88%), Postives = 194/340 (57.06%), Query Frame = 2 Query: 101 EYLSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDAL 1114 E LSY G + + E+ +E +V+++++ + L+L GNT+GV AA + + L +++ W+D+FTGRL+SEI AL SL L+ + L ELDLSDNAFGP+GV G+ LL S C+TLK L +NN G+G G L AL + S+ G + L+VFIAGRNRLEN G L F + SL+++ + QNGI GI L +++++ NL+VLN++DNT G +++ L + ++ + GDCL++ G + L + +K +++S EIT A +++ ++ K ++ +DL N + + +KE + DK D L Sbjct: 20 EELSYKGQGLKLDDEQSVEKIVREIDQ-FRGLRALRLEGNTIGVEAAHAIAKALETHNELECCHWSDMFTGRLRSEIPPALKSLGSALITSGARLTELDLSDNAFGPDGVKGIETLLKSPVCHTLKELRLNNCGMGIGGGIILASALTECYKQSSAMGSPLKLKVFIAGRNRLENDGATALARAFQ-MIGSLEEVHMPQNGINHPGITA---LATAMQHNPNLRVLNLNDNTFTKRGAVAMAQALKHLRSIQVVNFGDCLVRTEGAIAIAAALREGLTVIKELNLSFGEIT-EAAALVLARALKDKPDLKKLDLNGNCLGEYGCEALKEAMESVDKSDVL 353
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Cavefish
Match: rangap1a (RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]) HSP 1 Score: 180.259 bits (456), Expect = 2.760e-48 Identity = 115/329 (34.95%), Postives = 186/329 (56.53%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LSY G + + + E +VK + E + L+L GNT+GV AA+ + + L +++ Q W+D+FTGRL SL LM A L LDLSDNAFGP+GV G+ LL S+ C+TL+ L +NN G+G G + L AL + S+ G ++L+VFIAGRNRLEN G L + F + +L++I + QNGI G+ + N +++ + L+VLN++DNT +G +++ L ++ + GDCL+++ G + + L + LK +++S EIT A+ ++K VE K +E +DL N + +++++ Sbjct: 23 LSYKGQGLKLDNAQTAEEIVKAIRE-FQGLQALRLEGNTIGVEAAQAIAKALEDKSDFQCCYWSDMFTGRL--------FSLGAALMSAGARLKVLDLSDNAFGPDGVKGIENLLKSATCHTLQELRLNNCGMGIGGGKILAAALTECHKKSSKLGAPLSLKVFIAGRNRLENDGATALAQAFQL-IGTLEEIHMPQNGINHPGVTALAN---AVQQNPQLRVLNLNDNTFTKKGAIAMAQALKNLRSVQVINFGDCLVRSEGAVAIAEALKEGLPILKELNLSFGEITEEAALA-VAKAVEHKDQLEKLDLNGNCFGEDGCQNLRDLM 337
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000050645.1 (NLR family CARD domain-containing protein 3-like [Source:NCBI gene;Acc:103035935]) HSP 1 Score: 58.5362 bits (140), Expect = 2.227e-8 Identity = 90/347 (25.94%), Postives = 147/347 (42.36%), Query Frame = 2 Query: 149 DIEHVVKDLNENVNC----VTTLQLSGNTLGVNAAEKLIEPLSN-QTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIG--------------------------IHGIQGVDNLILSLKN-HINLKVLNISDNTIKPEGVKRLSKIL---PYF---EDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEI 1075 D E V L E++ ++ L LSG G + +KL L + + +KL N+ + E ALSS L HL+ELDL +N G +GV+ + ELL ++ C L+ L + + +G L ALK SN +E+ + G N + G+++LT+ + + LK + LL++ I G G+ L LK+ H +++L +S++ I EG LS L P DL E LG N G++ L LN L+ + I +S + I +DL++N++ + LN++ Sbjct: 764 DAEEVCASLTESLGTDPLLLSELDLSGKIQGDSEMKKLSHLLEDSHCRTKKLKLNN---SSVTEEGCAALSS---ALCLNPSHLIELDLGENKLGNSGVMKLCELLNNNFC-KLQRLGFADCCITEKGYAALASALK-----SNPSSTLMELDLRG-NDPGDEGVQLLTDLTKNENSKLKTLRLLKSPAAEKAHATLTKQLGANPLRLREMVLKGKIQGDSGLKQLSDLLKDSHCRIEILGLSNSNITEEGCAALSSSLCSNPSHLIGLDLCENKLG-----NLGVQQLCSFLNNTHCKLQQFRLKNCSIKEKGCADLVSALCSNPTHINVLDLSKNKVGDLGLNQL 1092
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000035222.1 (ribonuclease inhibitor-like [Source:NCBI gene;Acc:103031476]) HSP 1 Score: 54.299 bits (129), Expect = 3.684e-7 Identity = 65/217 (29.95%), Postives = 103/217 (47.47%), Query Frame = 2 Query: 338 ALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGI----QGVDNLILSL-KNHINLKVLNISDNTIKPEGVKRLSKIL--PYFE--DLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNE 961 A L+ L A HL+E+DLS+N G GV + L S C L+ L+++ L C L L +S + LE+ G N L ++G+++L D LK+ +G+ G +G +L L+L NH LK L+IS N + G+K LS IL P+ + L Y G C IK ++ ++ + +T+S++GN+ Sbjct: 272 ACEPLASVLESANPHLIEMDLSNNYIGDKGVKLLCSGLRSPNC-KLQKLSLDWCSLTDSCCSDLASVL-----SSQFCLRELEL---GDNDLLDSGVKLLCVGLQDPKCKLKR-------LGLSGCCVTKEGCSSLGLALSSNHSQLKDLDISYNHPEEHGLKELSTILDNPHCKLMKLSTEYGGKCRIKPGLQKYACEITLDPNTAHRTLSLNGNK 472
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000055168.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000774.1:21:36365:-1 gene:ENSAMXG00000031550.1 transcript:ENSAMXT00000055168.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.373 bits (124), Expect = 5.462e-7 Identity = 65/241 (26.97%), Postives = 114/241 (47.30%), Query Frame = 2 Query: 104 YLSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPL-SNQTKIQKL-IWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLS 820 + G W+ ++ V+K +N ++ L LS N L + L E L S+ K++KL + FT S++S L S++ L ELDLS+N +GV ++E L SS C L+ L + C L L+ +NS+ K ++L N L + G++ L++ L+K+ L+ G+ +++ S+ + +LK L++S+N ++ GVK+LS Sbjct: 20 FCRLVGCNFTWSVCNELASVLKSVNSSLK---ELDLSENELWDGGVKLLSEGLKSSHCKLEKLRLVGCNFTSYSCSDVSSVLESVNSSLK-------ELDLSENELQDDGVKDLSEGLKSSHC-KLEKLRLVGCNFTGYSCSDLSSVLES--VNSSLKELDL-----SENELRDDGVKKLSKGLKSSHCKLEKLRLVGCNFTSFSCSGLSSVLESVNS--SLKELDLSENKLRDYGVKKLS 240
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Sea Lamprey
Match: rangap1a (RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]) HSP 1 Score: 182.956 bits (463), Expect = 2.111e-49 Identity = 112/312 (35.90%), Postives = 182/312 (58.33%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDL 1036 +S+ G + NT ED VV + + + L L GNT+GV AA+ + L+ + Q+ +W+D+FTGRL++EI AL++L ++ + LVELDLSDNAFGP+GV LL S C++L+TL +NN G+G G + L +AL + S +G + L VF+AGRNRLEN G L + F M SL+++ + QNGI GI L + + L+VLN++DNT G +++ L + +E + GDCL+++ G + + L ++K ++++ EI A++ +++ +ETK +++DL Sbjct: 73 VSFKGECLKLNTAEDAGVVVTAI-QKCEHMEALSLEGNTIGVEAAKAIATALAEKPHFQRALWSDMFTGRLRTEIPPALTALGNAMVTSGARLVELDLSDNAFGPDGVRACDTLLRSRACFSLRTLRLNNCGMGIGGGKILAEALSECHRASAAEGKPLALRVFVAGRNRLENEGASALAKAFM-AMGSLEEVHVPQNGINHAGITA---LAKAFAKNPELRVLNLNDNTFTERGALSMAEALKVLKKVEVINFGDCLVRSVGAKAIAVALKDGLPHIKELNLAFGEINMDAAMQ-VAEALETKSFFKTLDL 378
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Yeast
Match: RNA1 (GTPase activating protein (GAP) for Gsp1p; involved in nuclear transport [Source:SGD;Acc:S000004848]) HSP 1 Score: 109.768 bits (273), Expect = 3.406e-26 Identity = 97/296 (32.77%), Postives = 153/296 (51.69%), Query Frame = 2 Query: 110 SYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLI----WNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMN---LEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLI-LSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFED-LEELYLGDCLIKNSGLEHLTKVLNQMSL-NLKTVSVSGNEIT 967 S +G + T +DI+ +++L C T L LSGNT+G A+E L + ++ T++++ + + DL+T RL E+ +L L L++ HL ++LSDNAFG + + + +A + +K L ++N G+G ++ AL + N K + LE FI GRNRLEN L LK + L QNGI +GV LI L+ NL++L++ DNT L+K LP ++D L EL L DCL+K +G + + KV ++ NL + NE+ Sbjct: 17 SISGKALKLTTSDDIKPYLEELAALKTC-TKLDLSGNTIGTEASEALAKCIAENTQVRESLVEVNFADLYTSRLVDEVVDSLKFLLPVLLKCP-HLEIVNLSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKAL--FHLAQNKKAASKPFLETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGI---RPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFTEVKFPNLHVLKFEYNEMA 303
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Nematostella
Match: EDO31643 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SXB3]) HSP 1 Score: 185.267 bits (469), Expect = 2.261e-52 Identity = 119/312 (38.14%), Postives = 185/312 (59.29%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDL 1036 +S+ G + N+ ED + + + +N + L L GNT+GV AA+ + E LS + + ++ +W+D+FTGR+++EI A+ +LS ++ A LVELDLSDNAFGP+GV +LL S CY+LK L NN GLG G + L AL +S G + LEVFI+GRNRLEN G + L E F + +L ++ + QNGI GI L S +++ NLK++N++DN +G ++K+LP ++E + GDCL+K++G L + NLK + +S +EI A+ ++K V+ K + +DL Sbjct: 26 ISFKGESLKLNSAEDAAKICEAI-KNCKDMQALCLEGNTIGVEAAKAIAEALSKRPEFERALWSDMFTGRVRAEIPPAMEALSDAVISAGTRLVELDLSDNAFGPDGVKACVKLLTSPACYSLKILRFNNNGLGVGGGKLLSGALLDNHKSSTAAGTPLKLEVFISGRNRLENPGSKCLAEAFKT-IGTLVEVQMPQNGIQHEGITA---LAESFRSNPNLKIINLNDNIFTEKGATSMAKVLPTLNNVEVINFGDCLVKSAGAVALAEACCTSLPNLKELILSFDEIKKDAALT-VAKSVQNKADFKKLDL 331
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Nematostella
Match: EDO35050 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SML2]) HSP 1 Score: 55.0694 bits (131), Expect = 6.303e-8 Identity = 52/174 (29.89%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 194 VTTLQLSGNTLGVNAAEKLIEPLSNQTKIQ--KLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFS-DGMTSLKKIVLLQNGIGI 706 + +L N L + L E L++ T ++ L WND+ G A+++L+ GL R + ELDLS N F GV+ V L S +L+TL+++N G+ G + L+ R NL+V GRN +NAG+ + E + +SL+++ +GIG Sbjct: 134 LKSLIFHSNNLSDQGSRLLSEALASNTALETLDLSWNDIRPG--------AMATLAKGL-RLNHTIQELDLSWNTFQSRGVIAVQWFLTHST--SLQTLDISNCGIHLDGAEVIAKVLRANR--------NLQVLKLGRNPFQNAGVPCILEAVRLNARSSLRELTF--DGIGF 286
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Medaka
Match: rangap1b (ran GTPase-activating protein 1-like [Source:NCBI gene;Acc:101160693]) HSP 1 Score: 204.142 bits (518), Expect = 9.591e-57 Identity = 126/339 (37.17%), Postives = 199/339 (58.70%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDALV 1117 LSY GL + + E + +V+D+ + + + L+L GNT+GV AA+ + + L N+ +Q+ W+D+FTGRL+SEI AL SL +M A L ELDLSDNAFGP+GV G+ +LL S+ C++LK L +NN G+G G + L +AL + S+ G + L VF+AGRNRLEN G L + F + SL+++ L QNGI H GV L +++ + L+V+N++DNT G ++ L +++ + GDCL+++ G L VL + L+ V++S EIT A +++ V K +E +DL N + + +++++ DK D L Sbjct: 23 LSYKGLGLKLDDAESVAELVRDIRRSSD-LRALRLEGNTVGVEAAQTIAKALENKEMLQRCYWSDMFTGRLRSEIPTALMSLGGAIMGAGARLTELDLSDNAFGPDGVKGIEQLLKSASCHSLKELRLNNCGMGIGGGKILAEALTEGHRRSSALGAPLRLRVFMAGRNRLENEGASALAKAFKL-IGSLEEVHLPQNGIN-HA--GVTALAAAMRQNPELRVVNLNDNTFTRRGALAMAHALRPLRNVQVINFGDCLVRSEGAVALAAVLREGLPTLREVNLSFGEIT-EAAAMAVAQAVADKPSMEKVDLNGNCLGEDGCEALRDLMENADKGDLLA 355
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Medaka
Match: rangap1a (Ran GTPase activating protein 1 [Source:NCBI gene;Acc:101170844]) HSP 1 Score: 179.874 bits (455), Expect = 3.552e-48 Identity = 112/329 (34.04%), Postives = 197/329 (59.88%), Query Frame = 2 Query: 107 LSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKG--MNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEIL 1087 LSY G ++ + + +E +VK++ ++ + L+L GNT+GV AA+ + + L + +++ W+D+FTGR++SEI AL+SL LM A L LDLSDNAFGP+GV G+ +LL S+ CYTL+ L +NN G+G G + L +L S+ + ++L+VF+AGRNRLEN G L + F + +L+++ + QNGI H GV L +++ + L++LN++DNT +G +++ L + ++ + GDCL++ +G + + + + + L +++S EIT A ++ V+ K ++ +DL N + + +KE++ Sbjct: 23 LSYKGQGRKLDDAKSVEEIVKNI-QDFEGLEALRLEGNTVGVEAAQAIAKALETKNELKCCYWSDMFTGRVRSEIPPALNSLGDALMLAGARLTVLDLSDNAFGPDGVKGIEKLLKSTSCYTLQELRLNNCGMGIGGGKILAASLMHCHQKSSAEKTPLSLKVFVAGRNRLENDGAAALAQAFQL-IGTLEEVHMPQNGIN-H--PGVTALASAMQQNPQLRILNLNDNTFTEKGALAMAQALKHLHSIQVINFGDCLVRPAGAKAIAEAVTEGLPALMELNLSFGEIT-EEAALALAHAVKDKEQLQRLDLNGNCLGEDGCKALKEVM 345
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Medaka
Match: nlrc3 (NLR family CARD domain containing 3 [Source:NCBI gene;Acc:101165263]) HSP 1 Score: 51.2174 bits (121), Expect = 4.090e-6 Identity = 67/242 (27.69%), Postives = 115/242 (47.52%), Query Frame = 2 Query: 194 VTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEF--FSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVL 913 +T L L N +G A+ L E L Q L + ++ E + AL+ + ++ LV L++ N G +G + + L + TL L + + LG +G L +ALK +N + L+ N + N GM LT+ F+ G+ +L L +N IGI +G N+ +LK + +L+ L+++ N + EGV+ +S + + + L L+L IK++ TKVL Sbjct: 764 LTYLNLRNNNIGSKGAKFLAEALKMN---QVLTSINFQNNSIEEEGAQALAEV----LQCNRKLVSLNVRKNKIGADGAKRIADALKMN--QTLTKLILCSNQLGDKGTVALAEALK---LNQTLLSLQLQ-----SNSISNRGMTALTKALRFNHGLVTLN---LRENSIGI---EGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTA----TKVL 978
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Medaka
Match: nlrc3 (NLR family CARD domain containing 3 [Source:NCBI gene;Acc:101165263]) HSP 1 Score: 51.2174 bits (121), Expect = 4.090e-6 Identity = 67/242 (27.69%), Postives = 115/242 (47.52%), Query Frame = 2 Query: 194 VTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEF--FSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVL 913 +T L L N +G A+ L E L Q L + ++ E + AL+ + ++ LV L++ N G +G + + L + TL L + + LG +G L +ALK +N + L+ N + N GM LT+ F+ G+ +L L +N IGI +G N+ +LK + +L+ L+++ N + EGV+ +S + + + L L+L IK++ TKVL Sbjct: 764 LTYLNLRNNNIGSKGAKFLAEALKMN---QVLTSINFQNNSIEEEGAQALAEV----LQCNRKLVSLNVRKNKIGADGAKRIADALKMN--QTLTKLILCSNQLGDKGTVALAEALK---LNQTLLSLQLQ-----SNSISNRGMTALTKALRFNHGLVTLN---LRENSIGI---EGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTA----TKVL 978
BLAST of Ran GTPase-activating protein 1 vs. Planmine SMEST
Match: SMESG000061064.1 (SMESG000061064.1) HSP 1 Score: 1327.77 bits (3435), Expect = 0.000e+0 Identity = 701/705 (99.43%), Postives = 703/705 (99.72%), Query Frame = 2 Query: 95 MLEYLSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHCAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDALVEDEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADEKEETKLQITPTVTQSALFPNKIDCCKPSLTNGTAQSNLFAQSNQINPLNTARNIFGSQSAKPFSFLDAAKPSAFPVTGSLFATSQKQQFTFTNSDSSKPSLFSATAQSNLFSQSPQTNFLKPVNIFGTTSAKPFSFIEASATPNALEKELIEYVISNLHSDSLMSIKEFNSTINQTLGKFSFDANIYKTAEDFPENAVRVGLMLCKNTSTCDAGVELISHLLLSKSAWNRATNAILVEMDCIKCEEKKFVPFSEDNPKMPVKVLTNVLERNSSLPNEVKTNLTVVLKNLSKKSNDATDELLKKLECCVDNLRI 2209 MLEYLSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGH AIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDALVEDEANSDGELSEDESD+YEGSGDDDDSSKSSTGEEEYSDEYSENDSYKADEKEETKLQITPTVTQSALFPNKIDCCKPSLTNGTAQSNLFAQSNQINPLNTARNIFGSQS+KPFSFLDAAKPSAFPVTGSLFATSQKQQFTFTNSDSSKPSLFSATAQSNLFSQSPQTNFLKPVNIFGTTSAKPFSFIEASATPNALEKELIEYVISNLHSDSLMSIKEFNS INQTLGKFSFDANIYKTAEDFPENAVRVGLMLCKNTSTCDAGVELISHLLLSKSAWNRATNAILVEMDCIKCEEKKFVPFSEDNPKMPVKVLTNVLERNSSLPNEVKTNLTVVLKNLSKKSNDATDELLKKLECCVDNLRI Sbjct: 1 MLEYLSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEKLIEPLSNQTKIQKLIWNDLFTGRLKSEISVALSSLSIGLMRAQVHLVELDLSDNAFGPNGVVGVTELLASSCCYTLKTLNMNNQGLGHQGCRQLVDALKKARINSNYKGMNLEVFIAGRNRLENAGMEMLTEFFSDGMTSLKKIVLLQNGIGIHGIQGVDNLILSLKNHINLKVLNISDNTIKPEGVKRLSKILPYFEDLEELYLGDCLIKNSGLEHLTKVLNQMSLNLKTVSVSGNEITGHSAIKFISKIVETKHIIESIDLTENEIKKVALNEIKEILAEHDKLDALVEDEANSDGELSEDESDNYEGSGDDDDSSKSSTGEEEYSDEYSENDSYKADEKEETKLQITPTVTQSALFPNKIDCCKPSLTNGTAQSNLFAQSNQINPLNTARNIFGSQSSKPFSFLDAAKPSAFPVTGSLFATSQKQQFTFTNSDSSKPSLFSATAQSNLFSQSPQTNFLKPVNIFGTTSAKPFSFIEASATPNALEKELIEYVISNLHSDSLMSIKEFNSNINQTLGKFSFDANIYKTAEDFPENAVRVGLMLCKNTSTCDAGVELISHLLLSKSAWNRATNAILVEMDCIKCEEKKFVPFSEDNPKMPVKVLTNVLERNSSLPNEVKTNLTVVLKNLSKKSNDATDELLKKLECCVDNLRI 705 The following BLAST results are available for this feature:
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Ran GTPase-activating protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of Ran GTPase-activating protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30015929 ID=SMED30015929|Name=Ran GTPase-activating protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2215bpback to top protein sequence of SMED30015929-orf-1 >SMED30015929-orf-1 ID=SMED30015929-orf-1|Name=SMED30015929-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=706bp MLEYLSYTGLQKQWNTEEDIEHVVKDLNENVNCVTTLQLSGNTLGVNAAEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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