inositol phosphoceramide mannosyltransferase 2-like

Overview
Nameinositol phosphoceramide mannosyltransferase 2-like
Smed IDSMED30015825
Length (bp)1100
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of inositol phosphoceramide mannosyltransferase 2-like (SMED30015825) t-SNE clustered cells

Violin plots show distribution of expression levels for inositol phosphoceramide mannosyltransferase 2-like (SMED30015825) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of inositol phosphoceramide mannosyltransferase 2-like (SMED30015825) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for inositol phosphoceramide mannosyltransferase 2-like (SMED30015825) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30015825

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Category 4 cellSMED30015825h1SMcG0002179 dd_Smed_v4_2174_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. UniProt/SwissProt
Match: sp|P33300|SUR1_YEAST (Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SUR1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.209e-20
Identity = 66/197 (33.50%), Postives = 98/197 (49.75%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKG-----TGSVEVQTGPVLLSKRIALYRE-RLNSSDDMMIYSPNYFNPFSW 836
            + KIIH ++KT DIP  +++  +   D  + D+K++ WTD+  Y  IK  YPWFL T+  +   I RAD  RYF L HYGG+Y DLD+ C R  + LL   + +    K   LG       V N  M S PR  F+++ L  +            ++   TGP+ LS     Y+  R+  +  + I  P Y+   S+
Sbjct:   55 IPKIIHQTYKTEDIPEHWKEGRQKCLDL-HPDYKYILWTDEMAYEFIKEEYPWFLDTFENYKYPIERADAIRYFILSHYGGVYIDLDDGCERKLDPLLAFPAFL---RKTSPLG-------VSNDVMGSVPRHPFFLKALKSLKHYDKYWFIPYMTIMGSTGPLFLSVIWKQYKRWRIPKNGTVRILQPAYYKMHSY 240
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. UniProt/SwissProt
Match: sp|Q10323|IMT3_SCHPO (Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17G8.11c PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.271e-20
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 3 
Query:  252 EKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQ 560
            +   + KIIH +WKTN+IP  +    KS  D  + D++++ WTD+     I T YPWFL  Y+ +P NI RADV RYF L+ YGGIY DLD  C R  + LL 
Sbjct:   53 QSAAIPKIIHQTWKTNEIPEKWVGAQKSCIDL-HPDYEYVLWTDESMREFIATDYPWFLTQYDSYPYNIERADVVRYFILYKYGGIYLDLDVGCNRTLDPLLH 154
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. UniProt/SwissProt
Match: sp|P38287|CSH1_YEAST (Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CSH1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.494e-20
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGT-----GSVEVQTGPVLLSKRIALYRERLNSSDDMMI 803
            + KIIH ++KTNDIP  + K  +   D  + D+ ++ WTD+ +   IK  YPWFL T+  +   I RAD  RYF L HYGGIY DLD+ C R  + LL+            +L      G V N  M S PR  F+++++  +   K        ++   TGP+ +S     Y+   N++++  +
Sbjct:   62 IPKIIHQTYKTNDIPEQWVKGRQKCIDL-HPDYTYILWTDEMSDTFIKQEYPWFLDTFRSYEYPIERADAIRYFILSHYGGIYIDLDDGCERRLDPLLK---------VPAFLRKTSPTG-VSNDVMGSVPRHPFFLKVIKSLKHYKKNWYIPYMTIMGSTGPLFISVVWKQYKRWSNTAENGAV 235
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. UniProt/SwissProt
Match: sp|Q9UT67|IMT2_SCHPO (Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4F11.04c PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.414e-19
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 3 
Query:  219 EQPIQTL----LKNCEKEKVT-KIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLL 557
            ++P+ TL    L +   E V  KIIH +WKT ++P  ++   +S  D  + D++++ WTD+ + N I   YPWFL  ++ +P N+ RADV RYF L+HYGG Y DLD+ C +  + LL
Sbjct:   62 DEPLPTLKLDSLNDISGEPVIPKIIHQTWKTTEVPEGWKGAQQSCIDL-HPDYEYILWTDEMSRNFIADNYPWFLPYFDAYPFNVQRADVIRYFVLYHYGGNYIDLDDGCRQRLDSLL 178
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. UniProt/SwissProt
Match: sp|O14084|IMT1_SCHPO (Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imt1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.867e-17
Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 3 
Query:  252 EKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKD------WKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGT-------GSVEVQTGPVLLSKRIALY 767
            E EK+ ++IH  WK  +IP  +   + S    C +       W+F+ WTD+   + +   Y WF+  ++ +P NI + D +RYF L+HYGG+Y DLD  C +P + LL   + +        L +    GY  N +  + P+  F  + +++  +SK          +V +  GP+ LS +   Y
Sbjct:   60 EMEKIPRVIHQLWKDENIPERWSNTVNS----CRRQHPDENGWQFILWTDEKIMSFMNENYSWFMPVFHSYPYNIQKFDAARYFILYHYGGVYMDLDIGCKKPMDPLLSKATFI--------LPSTEPIGY-SNDWFAATPKHPFLYQAIHN--LSKFNHRYFTKYPTVFLSAGPLFLSYQFCKY 229
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. TrEMBL
Match: A0A1I8H5Y8 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.492e-54
Identity = 101/251 (40.24%), Postives = 151/251 (60.16%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTN-----LKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEV-QTGPVLLSKRIALYRE--------RLNSSDDMMIYSPNYFNPFSW-IDNSKVDPNCKSHNKM-TLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            + +I+H SW +  +P  F ++ +S++  C+ D++   WTDKDN  LI   YPWFL+ Y+   R + RADVSR FY++HYGG+Y DLD ECLR F HLL N SLVFGAM+G  + +      + EG ++NSFMYSRPR  F+ +L+  + ++  TG + +  +GP L+   I   R+        R++  D + +Y P YFNP+SW + NS+   +C+ + +      L +CR S   + SYV+QYH   W 
Sbjct:   62 LVRIVHQSWASRKLPEQFAEWSRSFSA-CFPDFRRRLWTDKDNRQLIARHYPWFLRRYDSLARGVQRADVSRLFYMYHYGGLYCDLDCECLRDFRHLLANASLVFGAMQGLMIRSPRDPAYVAEGQIENSFMYSRPRHPFFWDLI--VYLNATTGEMPIMSSGPYLIMSGIHAARQLGIAPSGIRVDGRDFLTVYPPAYFNPYSWMLLNSR---HCRLYGRFENRAQLRQCRDSF--QDSYVMQYHTQVWA 304
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. TrEMBL
Match: A0A2R2MRS0 (inositol phosphoceramide mannosyltransferase 2-like OS=Lingula unguis OX=7574 GN=LOC106161453 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.024e-53
Identity = 99/236 (41.95%), Postives = 140/236 (59.32%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEG-YVQNSFMYSRPRQTFWMELLNDILM-SKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSW 965
            + +IIH SW+  D+PV F K+ +SW   C+ DW+F FWTD+DN   I   YPWFL TY+ +  NI RAD +RYFYL+HYGGIY DLD EC++PFEHL+    L+F +   +  G       Y+QNS M SR R  FW  L  D+L  +K     ++ TGP  L   +A  ++    ++D ++Y P YFNPF W  N     +CK+ N+MT + +  C++      +Y + +HA SW
Sbjct:  127 IPRIIHQSWRNKDLPVQFAKWQQSWRA-CFPDWEFKFWTDEDNRAFIHAHYPWFLTTYDSYSHNIKRADAARYFYLYHYGGIYVDLDYECIKPFEHLIVK-DLIFESTDIRLEGNMYPHNPYIQNSLMISRSRHPFWKLLWQDLLTHTKKALKPDLATGPKRL---MAAIKKYTMYNEDYLVYPPCYFNPFPWGQNLT---HCKTLNRMTDQEVTACKAHY--PHAYTITFHAQSW 352
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. TrEMBL
Match: A0A267F5L2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014144g3 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.353e-53
Identity = 100/251 (39.84%), Postives = 150/251 (59.76%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTN-----LKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEV-QTGPVLLSKRIALYRE--------RLNSSDDMMIYSPNYFNPFSW-IDNSKVDPNCKSHNKM-TLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            + +I+H SW +  +P  F ++ +S++  C+ D++   WTDKDN  LI   YPWFL+ Y+     + RADVSR FY++HYGG+Y DLD ECLR F HLL N SLVFGAM+G  + +      + EG ++NSFMYSRPR  F+ +L+  + ++  TG + +  +GP L+   I   R+        R++  D + +Y P YFNP+SW + NS+   +C+ + +      L +CR S   + SYV+QYH   W 
Sbjct:   62 LVRIVHQSWASRKLPEQFAEWSRSFSA-CFPDFRRRLWTDKDNRQLIARHYPWFLRRYDSLAPGVQRADVSRLFYMYHYGGLYCDLDCECLRDFRHLLANASLVFGAMQGLMIRSPRDPAYVAEGQIENSFMYSRPRHPFFWDLI--VYLNATTGEMPIMSSGPYLIMSGIHAARQLGIAPSGIRVDGRDFLTVYPPAYFNPYSWMLLNSR---HCRLYGRFENRAQLRQCRDSF--QDSYVMQYHTQVWA 304
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. TrEMBL
Match: A0A267DTA4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig010228g2 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.523e-53
Identity = 108/250 (43.20%), Postives = 142/250 (56.80%), Query Frame = 3 
Query:  234 TLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYS-RPRQTFWMELLNDI---LMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSW-IDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            +L        + KI+H SWKT  +P    ++  SW   C+ DW++  WTD+DN  L++  Y WFL  YN    NI RAD++RYFYL+H+GGIYTDLD  C++ FEHLL   +LVFGAM      + L    VQNSFM S RP   FWM LL  I     +   G  E  TGP +L + + LY  R N+S D+ +Y   YFNPFSW + NSK+   CK   +M+      C +S     ++VVQ H  SWG
Sbjct:   60 SLKAQARASNIIKILHQSWKTRQLPARAVRWSASWKS-CFPDWEWRLWTDQDNLALVRDHYAWFLPVYNGQRYNIERADLARYFYLYHFGGIYTDLDTVCMKNFEHLLHLETLVFGAMDTHPGDSVLPGQLVQNSFMASLRPGHPFWMRLLRRIERNFNAGKRGRPEDNTGPTVLMEELRLY-VRSNAS-DVKVYPGKYFNPFSWTLRNSKI---CKDFGQMSDSVEKICINSF--PKAFVVQLHTQSWG 301
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. TrEMBL
Match: A0A267H9I3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig018427g1 PE=4 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.243e-52
Identity = 97/241 (40.25%), Postives = 133/241 (55.19%), Query Frame = 3 
Query:  255 KEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDI---LMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            +  +  IIH SWKT  +P       +S    C  + +   WTD DN +L+K  Y W L  Y++    + RAD+ RY YL H+GGIY DLD  CL+ F  LL    L FG M GQ++ +++   YVQNSFM SRP+  FW+ LL+ I   L S+  G  E  TGP+++   +  Y    +   D+ I+ P YFNPFSWI N +  P+CK+H  M+      C  S    G+YVVQ H+ SW 
Sbjct:   52 EAGIPCIIHQSWKTRTLPSPRATRWRSTWLKCLPNCRHYLWTDADNRDLVKRHYSWLLNFYDKLKSGVQRADLVRYLYLLHFGGIYADLDTVCLKDFRPLLNGLGLAFGGMDGQWI-SSVNGSYVQNSFMASRPKHPFWIGLLHRIVRRLDSRKQGGAEESTGPLIMMAELKQYLA--DGHTDVRIFPPIYFNPFSWITNRR--PDCKTHGAMSDSEEATCVKSF--AGAYVVQMHSKSWA 285
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Yeast
Match: SUR1 (Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Csh1p; SUR1 has a paralog, CSH1, that arose from the whole genome duplication [Source:SGD;Acc:S000005978])

HSP 1 Score: 95.5153 bits (236), Expect = 1.742e-22
Identity = 66/197 (33.50%), Postives = 98/197 (49.75%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKG-----TGSVEVQTGPVLLSKRIALYRE-RLNSSDDMMIYSPNYFNPFSW 836
            + KIIH ++KT DIP  +++  +   D  + D+K++ WTD+  Y  IK  YPWFL T+  +   I RAD  RYF L HYGG+Y DLD+ C R  + LL   + +    K   LG       V N  M S PR  F+++ L  +            ++   TGP+ LS     Y+  R+  +  + I  P Y+   S+
Sbjct:   55 IPKIIHQTYKTEDIPEHWKEGRQKCLDL-HPDYKYILWTDEMAYEFIKEEYPWFLDTFENYKYPIERADAIRYFILSHYGGVYIDLDDGCERKLDPLLAFPAFL---RKTSPLG-------VSNDVMGSVPRHPFFLKALKSLKHYDKYWFIPYMTIMGSTGPLFLSVIWKQYKRWRIPKNGTVRILQPAYYKMHSY 240
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Yeast
Match: CSH1 (Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Sur1p; CSH1 has a paralog, SUR1, that arose from the whole genome duplication [Source:SGD;Acc:S000000365])

HSP 1 Score: 93.9745 bits (232), Expect = 6.471e-22
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 3 
Query:  264 VTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGT-----GSVEVQTGPVLLSKRIALYRERLNSSDDMMI 803
            + KIIH ++KTNDIP  + K  +   D  + D+ ++ WTD+ +   IK  YPWFL T+  +   I RAD  RYF L HYGGIY DLD+ C R  + LL+            +L      G V N  M S PR  F+++++  +   K        ++   TGP+ +S     Y+   N++++  +
Sbjct:   62 IPKIIHQTYKTNDIPEQWVKGRQKCIDL-HPDYTYILWTDEMSDTFIKQEYPWFLDTFRSYEYPIERADAIRYFILSHYGGIYIDLDDGCERRLDPLLK---------VPAFLRKTSPTG-VSNDVMGSVPRHPFFLKVIKSLKHYKKNWYIPYMTIMGSTGPLFISVVWKQYKRWSNTAENGAV 235
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Yeast
Match: OCH1 (Mannosyltransferase of the cis-Golgi apparatus; initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins [Source:SGD;Acc:S000003006])

HSP 1 Score: 54.6842 bits (130), Expect = 1.075e-8
Identity = 26/84 (30.95%), Postives = 43/84 (51.19%), Query Frame = 3 
Query:  306 PVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFY---PWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFE 548
            P  F+ Y K+W+     D+++   +D      ++  Y   P  ++ +   P NI +AD  RY  LF  GGIY+D+D   L+P +
Sbjct:  114 PSSFRTYQKTWSGSYSPDYQYSLISDDSIIPFLENLYAPVPIVIQAFKLMPGNILKADFLRYLLLFARGGIYSDMDTMLLKPID 197
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Planmine SMEST
Match: SMESG000045292.1 (SMESG000045292.1)

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 274/284 (96.48%), Postives = 279/284 (98.24%), Query Frame = 3 
Query:  117 MNKFMKIFFLVIVLGIAIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            M++  KIFFLV+ LG AIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFP NI+RADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSM+SKGSYVVQYHAHSWG
Sbjct:    1 MSRATKIFFLVLALGNAIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPWNIFRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMISKGSYVVQYHAHSWG 284
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Planmine SMEST
Match: SMESG000045480.1 (SMESG000045480.1)

HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0
Identity = 269/284 (94.72%), Postives = 274/284 (96.48%), Query Frame = 3 
Query:  117 MNKFMKIFFLVIVLGIAIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            M+K  KIFFL + LG AIFIG FFI+NYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYS+VFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILM KGT SVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKS N+MT ENLNKCRSSMLSKGSYVVQYHAHSWG
Sbjct:    1 MSKVKKIFFLFLALGNAIFIGIFFIENYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSIVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMFKGTDSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSPNQMTRENLNKCRSSMLSKGSYVVQYHAHSWG 284
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Planmine SMEST
Match: SMESG000045267.1 (SMESG000045267.1)

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 268/284 (94.37%), Postives = 275/284 (96.83%), Query Frame = 3 
Query:  117 MNKFMKIFFLVIVLGIAIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            M+KF KIFFLV+ LGI IFIG FFI+NYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDW FMFWTDKDNYNLIKTFYPWFLKTYN+FPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYS+VFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILM KGT SVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVD NCKSHN+MT ENLNKCRSSM+SKGSYVVQYHAHSWG
Sbjct:    1 MSKFKKIFFLVLALGIVIFIGIFFIENYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWNFMFWTDKDNYNLIKTFYPWFLKTYNKFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSIVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMFKGTDSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDLNCKSHNQMTRENLNKCRSSMISKGSYVVQYHAHSWG 284
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Planmine SMEST
Match: SMESG000037990.1 (SMESG000037990.1)

HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0
Identity = 251/275 (91.27%), Postives = 258/275 (93.82%), Query Frame = 3 
Query:  150 IVLGIAIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKVTKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKR--IALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            + LG AIFIGTFFI+NYERFYIVEQPIQTLLKNCE EKVTKIIHVSWKTNDIPV FQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYN+FPRNIYR DVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYS+VFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILM  GT SVEVQTGPVLLSK   IALYRERLNSSDDMMIYSPNYFNP SWI  SKVDPNCK HN+MTLENL KC+SSM+S GSYVVQYHAHSWG
Sbjct:   12 LALGNAIFIGTFFIENYERFYIVEQPIQTLLKNCENEKVTKIIHVSWKTNDIPVEFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFYPWFLKTYNKFPRNIYRVDVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSIVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMFNGTDSVEVQTGPVLLSKSFIIALYRERLNSSDDMMIYSPNYFNPLSWIIKSKVDPNCKFHNQMTLENLKKCKSSMISTGSYVVQYHAHSWG 286
[Close]
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Planmine SMEST
Match: SMESG000059812.1 (SMESG000059812.1)

HSP 1 Score: 396.741 bits (1018), Expect = 3.490e-140
Identity = 188/200 (94.00%), Postives = 193/200 (96.50%), Query Frame = 3 
Query:  369 MFWTDKDNYNLIKTFYPWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGSVEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNCKSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG 968
            MFWTD+DNYNLIKTFYPWFLK YNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYS+VFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILM KGT SVEVQTGPVLLSKRI L+RERLNSSD MMIYSPNYFNPFSWID SKVDPNCKSHN+MT ENLNKCRSSM+SKGSYVVQYHAHSWG
Sbjct:    1 MFWTDEDNYNLIKTFYPWFLKKYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNYSIVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMFKGTNSVEVQTGPVLLSKRIVLFRERLNSSDYMMIYSPNYFNPFSWIDKSKVDPNCKSHNQMTRENLNKCRSSMISKGSYVVQYHAHSWG 200
The following BLAST results are available for this feature:
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P33300|SUR1_YEAST1.209e-2033.50Mannosyl phosphorylinositol ceramide synthase SUR1... [more]
sp|Q10323|IMT3_SCHPO1.271e-2046.60Inositol phosphoceramide mannosyltransferase 3 OS=... [more]
sp|P38287|CSH1_YEAST4.494e-2032.97Mannosyl phosphorylinositol ceramide synthase CSH1... [more]
sp|Q9UT67|IMT2_SCHPO2.414e-1940.68Inositol phosphoceramide mannosyltransferase 2 OS=... [more]
sp|O14084|IMT1_SCHPO6.867e-1728.65Inositol phosphoceramide mannosyltransferase 1 OS=... [more]
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I8H5Y83.492e-5440.24Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A2R2MRS01.024e-5341.95inositol phosphoceramide mannosyltransferase 2-lik... [more]
A0A267F5L24.353e-5339.84Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267DTA46.523e-5343.20Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267H9I31.243e-5240.25Uncharacterized protein OS=Macrostomum lignano OX=... [more]
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
SUR11.742e-2233.50Mannosylinositol phosphorylceramide (MIPC) synthas... [more]
CSH16.471e-2232.97Mannosylinositol phosphorylceramide (MIPC) synthas... [more]
OCH11.075e-830.95Mannosyltransferase of the cis-Golgi apparatus; in... [more]
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of inositol phosphoceramide mannosyltransferase 2-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000045292.10.000e+096.48SMESG000045292.1[more]
SMESG000045480.10.000e+094.72SMESG000045480.1[more]
SMESG000045267.10.000e+094.37SMESG000045267.1[more]
SMESG000037990.10.000e+091.27SMESG000037990.1[more]
SMESG000059812.13.490e-14094.00SMESG000059812.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30015825 ID=SMED30015825|Name=inositol phosphoceramide mannosyltransferase 2-like|organism=Schmidtea mediterranea sexual|type=transcript|length=1100bp
TGAAAATTCCAATTCATGACGTCAAAGATCTTTCTAGTTGCTCTACAATT
TACGTAGGCTGTACTTGTTAATTAGCAAATTTGTGTTAGATGTTATTATA
AATCATAGTATTTTAAATGAATAAATTCATGAAGATTTTTTTCTTAGTCA
TTGTACTTGGAATTGCCATCTTTATAGGAACTTTTTTTATTAAAAATTAT
GAACGATTTTACATTGTCGAACAACCGATTCAAACCCTATTGAAAAATTG
TGAAAAGGAAAAAGTGACGAAAATTATCCATGTTTCTTGGAAGACAAATG
ATATTCCAGTAGTGTTTCAAAAGTATTTAAAATCATGGACAGATTTTTGT
TACAAAGATTGGAAATTCATGTTCTGGACAGATAAGGACAATTATAACTT
GATCAAAACCTTTTATCCATGGTTTCTTAAAACGTACAACGAATTTCCTA
GGAATATTTATCGAGCCGACGTCAGTCGGTATTTCTATTTGTTTCATTAT
GGAGGAATTTACACAGATCTCGACAATGAATGTTTGCGTCCATTTGAGCA
TTTGTTGCAAAACTATTCTCTCGTTTTCGGGGCGATGAAAGGTCAATATT
TAGGGACCAATTTAAAAGAAGGATACGTTCAAAATTCTTTCATGTATTCA
AGACCGAGACAGACATTTTGGATGGAGTTGTTGAATGATATTCTCATGTC
TAAGGGCACAGGTTCTGTGGAAGTTCAAACCGGACCAGTTTTATTATCAA
AACGAATCGCCTTATATCGAGAACGGTTAAATTCCTCAGATGACATGATG
ATTTATTCTCCAAATTATTTCAACCCATTCAGTTGGATAGATAATTCAAA
AGTGGACCCGAATTGTAAATCTCATAACAAAATGACTCTGGAGAATTTAA
ACAAATGTAGAAGCTCAATGCTTTCAAAGGGATCATATGTCGTTCAGTAT
CATGCCCACAGTTGGGGATAAATTCTTAGAACTATAATAAATATTTAGAT
TAGGTTTTGTATTTGTATATTTCATTAATTTTAACTCTAAAATAAATCTT
ATGATGATATCTGCTCATTTACAAGAAAACTCAAAGTAGAATCCTCAGAA
back to top

protein sequence of SMED30015825-orf-1

>SMED30015825-orf-1 ID=SMED30015825-orf-1|Name=SMED30015825-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=285bp
MNKFMKIFFLVIVLGIAIFIGTFFIKNYERFYIVEQPIQTLLKNCEKEKV
TKIIHVSWKTNDIPVVFQKYLKSWTDFCYKDWKFMFWTDKDNYNLIKTFY
PWFLKTYNEFPRNIYRADVSRYFYLFHYGGIYTDLDNECLRPFEHLLQNY
SLVFGAMKGQYLGTNLKEGYVQNSFMYSRPRQTFWMELLNDILMSKGTGS
VEVQTGPVLLSKRIALYRERLNSSDDMMIYSPNYFNPFSWIDNSKVDPNC
KSHNKMTLENLNKCRSSMLSKGSYVVQYHAHSWG*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000018Category 4 cell
PLANA:0000026gut
PLANA:0000034epidermis
PLANA:0000418head
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR007577GlycoTrfase_DXD_sugar-bd_CS
IPR029044Nucleotide-diphossugar_trans
Vocabulary: molecular function
TermDefinition
GO:0000030mannosyltransferase activity
GO:0016740transferase activity
GO:0016757transferase activity, transferring glycosyl groups
Vocabulary: cellular component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0005789endoplasmic reticulum membrane
GO:0005794Golgi apparatus
GO:0016020membrane
GO:0016021integral component of membrane
GO:0032588trans-Golgi network membrane
GO:0033106cis-Golgi network membrane
Vocabulary: biological process
TermDefinition
GO:0051999mannosyl-inositol phosphorylceramide biosynthetic process
GO:0097502mannosylation
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.90.550.20coord: 50..277
e-value: 1.6E-14
score: 56.7
NoneNo IPR availablePANTHERPTHR32385FAMILY NOT NAMEDcoord: 42..284
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
IPR007577Glycosyltransferase, DXD sugar-binding motifPFAMPF04488Gly_transf_sugcoord: 65..150
e-value: 4.0E-16
score: 59.4
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILYSSF53448Nucleotide-diphospho-sugar transferasescoord: 47..246