Hox class homeodomain protein DjAbd-Ba
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30015704 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 46Note: Hover over icons to view figure legend
Homology
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Human
Match: AC004080.3 (HOXA10-HOXA9 readthrough) HSP 1 Score: 82.0333 bits (201), Expect = 2.169e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 46 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 104
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Human
Match: HOXA10 (homeobox A10 [Source:HGNC Symbol;Acc:HGNC:5100]) HSP 1 Score: 80.4925 bits (197), Expect = 5.274e-18 Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITSTGQEYEDINFS 1291 RKKR PY+++QT+ LE E++ N Y+TR++R EI+ +HL++RQ+K+WFQNRRMK KK+ E+T+ + NFS Sbjct: 21 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTA------NFNFS 94
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Human
Match: HOXA9 (homeobox A9 [Source:HGNC Symbol;Acc:HGNC:5109]) HSP 1 Score: 83.9593 bits (206), Expect = 5.388e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 147 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 205
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Human
Match: HOXA9 (homeobox A9 [Source:HGNC Symbol;Acc:HGNC:5109]) HSP 1 Score: 83.9593 bits (206), Expect = 8.153e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 159 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 217
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Human
Match: HOXA9 (homeobox A9 [Source:HGNC Symbol;Acc:HGNC:5109]) HSP 1 Score: 84.3445 bits (207), Expect = 1.219e-17 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 206 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 264
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Celegans
Match: php-3 (Posterior Hox gene Paralog [Source:UniProtKB/TrEMBL;Acc:Q9XW88]) HSP 1 Score: 95.5153 bits (236), Expect = 7.778e-22 Identity = 41/68 (60.29%), Postives = 55/68 (80.88%), Query Frame = 2 Query: 1031 SSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 +S + RKKRKPY++ QT+ LE E++ NTY+++QKRWE+A LHL+ERQ+K+WFQNRRMK KK K R Sbjct: 193 TSSSHAMRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQR 260
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Celegans
Match: php-3 (Posterior Hox gene Paralog [Source:UniProtKB/TrEMBL;Acc:Q9XW88]) HSP 1 Score: 95.5153 bits (236), Expect = 7.778e-22 Identity = 41/68 (60.29%), Postives = 55/68 (80.88%), Query Frame = 2 Query: 1031 SSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 +S + RKKRKPY++ QT+ LE E++ NTY+++QKRWE+A LHL+ERQ+K+WFQNRRMK KK K R Sbjct: 193 TSSSHAMRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQR 260
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Celegans
Match: mab-5 (Homeobox protein mab-5 [Source:UniProtKB/Swiss-Prot;Acc:P10038]) HSP 1 Score: 76.6406 bits (187), Expect = 5.440e-16 Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 2 Query: 1046 KTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK-IKNRGGYNE 1249 ++++ R+ YSR QT+ LE E+ + Y+TR++R EI+ LHL+ERQ+K+WFQNRRMK KK K GG NE Sbjct: 116 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEGGSNE 184
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Celegans
Match: nob-1 (KNOB-like posterior (NO Backside) [Source:UniProtKB/TrEMBL;Acc:G5EFY5]) HSP 1 Score: 72.7886 bits (177), Expect = 2.837e-14 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 +KKR+PY + Q LE EY N Y+T ++R E++ +L L E+Q+KVWFQNRRMK KK++ R Sbjct: 163 KKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKLRQR 223
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Celegans
Match: nob-1 (KNOB-like posterior (NO Backside) [Source:UniProtKB/TrEMBL;Acc:G5EFY5]) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-14 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 +KKR+PY + Q LE EY N Y+T ++R E++ +L L E+Q+KVWFQNRRMK KK++ R Sbjct: 12 KKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKLRQR 72
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0346764) HSP 1 Score: 91.2781 bits (225), Expect = 3.307e-20 Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1043 VKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 V RKKRKPYS++QT+ LE E++ N Y+++QKRWE+A L L+ERQ+K+WFQNRRMK KK Sbjct: 162 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0330709) HSP 1 Score: 92.0485 bits (227), Expect = 3.380e-20 Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1043 VKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 V RKKRKPYS++QT+ LE E++ N Y+++QKRWE+A L L+ERQ+K+WFQNRRMK KK Sbjct: 162 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0083381) HSP 1 Score: 90.8929 bits (224), Expect = 3.776e-20 Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1043 VKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 V RKKRKPYS++QT+ LE E++ N Y+++QKRWE+A L L+ERQ+K+WFQNRRMK KK Sbjct: 162 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0083382) HSP 1 Score: 90.8929 bits (224), Expect = 3.776e-20 Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1043 VKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 V RKKRKPYS++QT+ LE E++ N Y+++QKRWE+A L L+ERQ+K+WFQNRRMK KK Sbjct: 162 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0415465) HSP 1 Score: 90.8929 bits (224), Expect = 3.776e-20 Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1043 VKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 V RKKRKPYS++QT+ LE E++ N Y+++QKRWE+A L L+ERQ+K+WFQNRRMK KK Sbjct: 162 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Zebrafish
Match: hoxd9a (homeobox D9a [Source:NCBI gene;Acc:30350]) HSP 1 Score: 84.7297 bits (208), Expect = 5.879e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY++YQT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+ Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKM 253
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Zebrafish
Match: hoxa9a (homeobox A9a [Source:NCBI gene;Acc:58047]) HSP 1 Score: 82.8037 bits (203), Expect = 2.098e-17 Identity = 35/59 (59.32%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++Q + LE E++ NTY+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK Sbjct: 184 TRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKF 242
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Zebrafish
Match: hoxa9a (homeobox A9a [Source:NCBI gene;Acc:58047]) HSP 1 Score: 82.8037 bits (203), Expect = 2.098e-17 Identity = 35/59 (59.32%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++Q + LE E++ NTY+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK Sbjct: 184 TRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKF 242
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Zebrafish
Match: hoxb9a (homeobox B9a [Source:NCBI gene;Acc:30344]) HSP 1 Score: 81.6481 bits (200), Expect = 4.952e-17 Identity = 35/59 (59.32%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 +RKKR PY++YQT+ LE E++ N Y+TR +R E+A L+L+ERQ+K+WFQNRRMK KK+ Sbjct: 184 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKM 242
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Zebrafish
Match: hoxd11a (homeobox D11a [Source:NCBI gene;Acc:30405]) HSP 1 Score: 81.6481 bits (200), Expect = 6.741e-17 Identity = 37/77 (48.05%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 995 STVKSITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 S+V + + +N S K+RKKR PYS+YQ LE E+ N YI ++KR +++ L L++RQ+K+WFQNRRMK KK+ Sbjct: 186 SSVSTCDEEKNSGSSATKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIWFQNRRMKEKKL 262
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Xenopus
Match: ENSXETT00000012547.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:32894477:32894749:1 gene:ENSXETG00000005170.1 transcript:ENSXETT00000012547.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 81.6481 bits (200), Expect = 1.470e-18 Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITS 1258 RKKR PY+++QT+ LE E++ N Y+TR++R EI+ +HLS+RQ+K+WFQNRRMK KK+ E+T+ Sbjct: 17 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLSDRQVKIWFQNRRMKLKKMNRENRIRELTA 85
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Xenopus
Match: ENSXETT00000012532.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:32900780:32902234:1 gene:ENSXETG00000005181.1 transcript:ENSXETT00000012532.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 84.7297 bits (208), Expect = 7.490e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 195 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 253
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Xenopus
Match: ache (acetylcholinesterase (Cartwright blood group) [Source:Xenbase;Acc:XB-GENE-923160]) HSP 1 Score: 83.5741 bits (205), Expect = 1.604e-17 Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 +RKKR PY++YQT+ LE E++ N Y+TR +R E+A L+LSERQ+K+WFQNRRMK KK+ Sbjct: 181 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKL 239
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Xenopus
Match: tollip (toll interacting protein [Source:Xenbase;Acc:XB-GENE-946207]) HSP 1 Score: 82.0333 bits (201), Expect = 1.882e-16 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 1001 VKSITKSENKSSE--TVKT-RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITS 1258 K K+EN + T K+ RKKR PY+++QT+ LE E++ N Y+TR++R EI+ ++L++RQ+K+WFQNRRMK KK+ E+TS Sbjct: 258 AKEDIKAENAAGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRELTS 346
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Xenopus
Match: HOXD10 (homeobox D10 [Source:NCBI gene;Acc:100038085]) HSP 1 Score: 81.2629 bits (199), Expect = 2.966e-16 Identity = 34/69 (49.28%), Postives = 53/69 (76.81%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITS 1258 RKKR PY+++QT+ LE E++ N Y+TR++R EI+ ++L++RQ+K+WFQNRRMK KK+ E+T+ Sbjct: 265 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRENRIRELTA 333
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Mouse
Match: Hoxa10 (homeobox A10 [Source:MGI Symbol;Acc:MGI:96171]) HSP 1 Score: 80.4925 bits (197), Expect = 3.188e-18 Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITSTGQEYEDINFS 1291 RKKR PY+++QT+ LE E++ N Y+TR++R EI+ +HL++RQ+K+WFQNRRMK KK+ E+T+ + NFS Sbjct: 21 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTA------NFNFS 94
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Mouse
Match: Hoxa9 (homeobox A9 [Source:MGI Symbol;Acc:MGI:96180]) HSP 1 Score: 84.3445 bits (207), Expect = 7.633e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 205 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 263
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Mouse
Match: Hoxb9 (homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]) HSP 1 Score: 83.5741 bits (205), Expect = 1.196e-17 Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGG 1240 +RKKR PY++YQT+ LE E++ N Y+TR +R E+A L+LSERQ+K+WFQNRRMK KK+ G Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQG 248
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Mouse
Match: Hoxa10 (homeobox A10 [Source:MGI Symbol;Acc:MGI:96171]) HSP 1 Score: 84.7297 bits (208), Expect = 2.752e-17 Identity = 40/84 (47.62%), Postives = 62/84 (73.81%), Query Frame = 2 Query: 1013 TKSENKSS-ETVKT-RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITS 1258 +K EN ++ T K+ RKKR PY+++QT+ LE E++ N Y+TR++R EI+ +HL++RQ+K+WFQNRRMK KK+ E+T+ Sbjct: 328 SKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTA 411
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Mouse
Match: Hoxc12 (homeobox C12 [Source:MGI Symbol;Acc:MGI:96194]) HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-16 Identity = 33/60 (55.00%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1046 KTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 ++RKKRKPYS+ Q LE E++ N +ITRQ+R E++ +L+LS++Q+K+WFQNRRMK K++ Sbjct: 211 RSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRL 270
BLAST of Hox class homeodomain protein DjAbd-Ba vs. UniProt/SwissProt
Match: sp|P09087|ABDB_DROME (Homeobox protein abdominal-B OS=Drosophila melanogaster OX=7227 GN=Abd-B PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 9.302e-19 Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 1043 VKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 V RKKRKPYS++QT+ LE E++ N Y+++QKRWE+A L L+ERQ+K+WFQNRRMK KK Sbjct: 385 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
BLAST of Hox class homeodomain protein DjAbd-Ba vs. UniProt/SwissProt
Match: sp|Q9PWD6|HXA10_MORSA (Homeobox protein Hox-A10 OS=Morone saxatilis OX=34816 GN=hoxa10 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.744e-18 Identity = 44/89 (49.44%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 998 TVKSITKSENKSS-ETVKT-RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITS 1258 + K TKSEN ++ T K+ RKKR PY+++QT+ LE E++ N Y+TR++R EI+ +HL++RQ+K+WFQNRRMK KK+ E+TS Sbjct: 196 STKGDTKSENTANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRRMKLKKMTRENRIRELTS 284
BLAST of Hox class homeodomain protein DjAbd-Ba vs. UniProt/SwissProt
Match: sp|P24340|HXD9_CHICK (Homeobox protein Hox-D9 (Fragment) OS=Gallus gallus OX=9031 GN=HOXD9 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.996e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY++YQT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+ Sbjct: 1 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKM 59
BLAST of Hox class homeodomain protein DjAbd-Ba vs. UniProt/SwissProt
Match: sp|P50209|HXA9_AMBME (Homeobox protein Hox-A9 (Fragment) OS=Ambystoma mexicanum OX=8296 GN=HOXA9 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.830e-18 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KKI Sbjct: 78 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 136
BLAST of Hox class homeodomain protein DjAbd-Ba vs. UniProt/SwissProt
Match: sp|Q9PVR2|HXD9_ORYLA (Homeobox protein Hox-D9 OS=Oryzias latipes OX=8090 GN=hoxd9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.466e-17 Identity = 38/69 (55.07%), Postives = 56/69 (81.16%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI-KNRGGYNEI 1252 TRKKR PY++YQT+ LE E++ N Y+TR +R+E+A L L+ERQ+K+WFQNRRMK KK+ + +GG +++ Sbjct: 203 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRFEVARILSLTERQVKIWFQNRRMKMKKMNREKGGKDQL 271
BLAST of Hox class homeodomain protein DjAbd-Ba vs. TrEMBL
Match: Q9BLF9 (Hox class homeodomain protein DjAbd-Ba OS=Dugesia japonica OX=6161 GN=DjAbd-Ba PE=2 SV=1) HSP 1 Score: 492.656 bits (1267), Expect = 5.824e-171 Identity = 271/317 (85.49%), Postives = 290/317 (91.48%), Query Frame = 2 Query: 455 MNEDYHAFSAYTXXXXXXXXXXXXXXXXXXXXECLSRNKSNPFPQCIMGSNFQQSAVINDLNFYNNWYATHAMNSNFADSAFSKSDIKSHIESTPYDQFSTTKSPSLVSSFINKPTPNAHDQLLWSIYNSETDTIFXXXXXXXXXXXXILNNIEMYRLPXXXXXXXXXXXXXXXGNSNICSTVKSITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITSTGQEYEDINFSSKYDDLEDMEPSNKTYEGIMSYDNPEILINKLNMFKSC 1405 MNEDYHA SAYTSYHYPNYY HN+ + +CLSRNKSN FP CIMGSNFQQS VINDLNFYNNWYA HAM+S+F+DSAF KSDIKSHI+ST YDQF+ KSPSLVSSFINKPTPNAHDQLLWSIYNSE DTIFNNRNNYSPYSSNILNNIEMYRLPQT T++ A + GNSNICST KSITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITSTGQEYEDINF+SKYDDLE+++PSNK+YEGIMSY+NPEI++NKLNMFKSC Sbjct: 1 MNEDYHALSAYTSYHYPNYYPHNSIPSY----DCLSRNKSNSFPHCIMGSNFQQSTVINDLNFYNNWYANHAMSSSFSDSAFGKSDIKSHIDSTTYDQFTNNKSPSLVSSFINKPTPNAHDQLLWSIYNSEADTIFNNRNNYSPYSSNILNNIEMYRLPQTATSTAANSQSDS-GNSNICSTTKSITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITSTGQEYEDINFNSKYDDLEELDPSNKSYEGIMSYENPEIIMNKLNMFKSC 312
BLAST of Hox class homeodomain protein DjAbd-Ba vs. TrEMBL
Match: B1NTA4 (AbdBa Hox protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=abdba PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.842e-81 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 2 Query: 476 FSAYTXXXXXXXXXXXXXXXXXXXXECLSRNKSNPFPQCIMGSNFQQSAVINDLNFYNNWYATHAMNSNFADSAFSKSDIKSHIESTPYDQFSTTKSPSLVSSFINKPTPNAHDQLLWSIYNSETDTIFXXXXXXXXXXXXILNNIEMYRLPXXXXXXXXXXXXXXXGNSNICSTVKSIT 1015 FSAYTSYHYPNYYHHNNPHNSNPSYECLSRNKSNPFPQCIMGSNFQQSAVINDLNFYNNWYATHAMNSNFADSAFSKSDIKSHIESTPYDQFSTTKSPSLVSSFINKPTPNAHDQLLWSIYNSETDTIFNNRNNYSPYSSNILNNIEMYRLPQTTTTSTAANSQSDSGNSNICSTVKSIT Sbjct: 7 FSAYTSYHYPNYYHHNNPHNSNPSYECLSRNKSNPFPQCIMGSNFQQSAVINDLNFYNNWYATHAMNSNFADSAFSKSDIKSHIESTPYDQFSTTKSPSLVSSFINKPTPNAHDQLLWSIYNSETDTIFNNRNNYSPYSSNILNNIEMYRLPQTTTTSTAANSQSDSGNSNICSTVKSIT 186
BLAST of Hox class homeodomain protein DjAbd-Ba vs. TrEMBL
Match: T1EF40 (Homeobox domain-containing protein OS=Helobdella robusta OX=6412 GN=20195192 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.492e-29 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 2 Query: 1031 SSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITSTGQEYEDINFSS 1294 ++E + RKKRKPY+RYQTM+LE+E+V N+YITRQKRWEI+CKLHLSERQ+KVWFQNRRMK KK+ +R T+ +E +D SS Sbjct: 14 AAEQARQRKKRKPYTRYQTMVLENEFVSNSYITRQKRWEISCKLHLSERQVKVWFQNRRMKRKKLNDRA-----TTMTKEPKDTPHSS 96
BLAST of Hox class homeodomain protein DjAbd-Ba vs. TrEMBL
Match: A0A0F6QL13 (MaPost2 Hox protein OS=Maculaura alaskensis OX=187798 GN=Post2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.004e-28 Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 983 SNICSTVKSITK--------SENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR-----------GGYNEITSTGQEYE 1276 S++ +TV SI + SEN S +TRKKRKPY+RYQTM+LE+E++ N+YITRQKRWEI+CKLHL+ERQ+KVWFQNRRMK KK+ +R G N +T T +YE Sbjct: 129 SDLNTTVPSIPRLSHEEVNISENNSCTEPRTRKKRKPYTRYQTMVLENEFMTNSYITRQKRWEISCKLHLTERQVKVWFQNRRMKRKKLNSRAKVKSEVENTNGMQNNLTPTNVKYE 245
BLAST of Hox class homeodomain protein DjAbd-Ba vs. TrEMBL
Match: Q9U9T2 (Post2 homeobox protein (Fragment) OS=Alitta virens OX=880429 GN=Post2 PE=4 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.180e-27 Identity = 49/64 (76.56%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 1046 KTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRG 1237 + RKKRKPY+RYQTM+LE+E++GN+YITRQKRWEI+CKLHLSERQ+KVWFQNRRMK KK+ R Sbjct: 5 RQRKKRKPYTRYQTMVLENEFMGNSYITRQKRWEISCKLHLSERQVKVWFQNRRMKRKKLNERA 68
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Cavefish
Match: ENSAMXT00000005320.2 (homeobox protein Hox-A9a-like [Source:NCBI gene;Acc:103022020]) HSP 1 Score: 85.5001 bits (210), Expect = 2.055e-18 Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNE 1249 TRKKR PY+++Q + LE E++ NTY+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+ G +E Sbjct: 191 TRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKLNKDGTKDE 257
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Cavefish
Match: hoxd9a (homeobox protein Hox-D9a [Source:NCBI gene;Acc:103033248]) HSP 1 Score: 85.5001 bits (210), Expect = 2.781e-18 Identity = 38/64 (59.38%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI-KNRG 1237 TRKKR PY++YQT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+ + RG Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNRERG 258
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Cavefish
Match: hoxd9a (homeobox protein Hox-D9a [Source:NCBI gene;Acc:103033248]) HSP 1 Score: 85.5001 bits (210), Expect = 2.781e-18 Identity = 38/64 (59.38%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI-KNRG 1237 TRKKR PY++YQT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+ + RG Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNRERG 258
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Cavefish
Match: ENSAMXT00000043089.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000050.1:1458192:1460142:1 gene:ENSAMXG00000035583.1 transcript:ENSAMXT00000043089.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 83.9593 bits (206), Expect = 2.224e-17 Identity = 35/70 (50.00%), Postives = 53/70 (75.71%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITST 1261 RKKR PY++YQT+ LE E++ N Y+TR++R EI+ +HL++RQ+K+WFQNRRMK KK+ +++ T Sbjct: 262 RKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRESRIRDLSHT 331
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Cavefish
Match: hoxb9a (homeobox B9 [Source:NCBI gene;Acc:103044445]) HSP 1 Score: 81.6481 bits (200), Expect = 3.709e-17 Identity = 35/59 (59.32%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 +RKKR PY++YQT+ LE E++ N Y+TR +R E+A L+L+ERQ+K+WFQNRRMK KK+ Sbjct: 184 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKM 242
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011242.1 (pep scaffold:Pmarinus_7.0:GL476758:607601:607780:-1 gene:ENSPMAG00000010215.1 transcript:ENSPMAT00000011242.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 77.411 bits (189), Expect = 2.701e-18 Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIK 1228 RKKR PYS+ QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+K Sbjct: 2 RKKRCPYSKQQTLELEKEFLFNMYLTRDRRYEVARGLNLTERQVKIWFQNRRMKLKKMK 60
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011060.1 (pep scaffold:Pmarinus_7.0:GL482503:5543:5722:1 gene:ENSPMAG00000010033.1 transcript:ENSPMAT00000011060.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 77.411 bits (189), Expect = 2.701e-18 Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIK 1228 RKKR PYS+ QT+ LE E++ N Y+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK+K Sbjct: 2 RKKRCPYSKQQTLELEKEFLFNMYLTRDRRYEVARGLNLTERQVKIWFQNRRMKLKKMK 60
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011221.1 (pep scaffold:Pmarinus_7.0:GL477881:55654:55833:1 gene:ENSPMAG00000010194.1 transcript:ENSPMAT00000011221.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 75.485 bits (184), Expect = 1.174e-17 Identity = 33/58 (56.90%), Postives = 49/58 (84.48%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 RKKR PY++YQT+ LE E++ N Y+TR++R EI+ ++L++RQ+K+WFQNRRMK KK+ Sbjct: 2 RKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISRGVNLTDRQVKIWFQNRRMKLKKL 59
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005057.1 (pep scaffold:Pmarinus_7.0:GL483321:9136:13526:-1 gene:ENSPMAG00000004598.1 transcript:ENSPMAT00000005057.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 75.485 bits (184), Expect = 2.840e-17 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 2 Query: 1052 RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGY 1243 R+ R+ YSRYQT+ LE E++ N Y+TR++R E++ L LSERQ+K+WFQNRRMK KK NR + Sbjct: 28 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHVLGLSERQVKIWFQNRRMKWKKENNRDKF 91
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011449.1 (pep scaffold:Pmarinus_7.0:GL493006:3300:3479:1 gene:ENSPMAG00000010422.1 transcript:ENSPMAT00000011449.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 74.3294 bits (181), Expect = 3.216e-17 Identity = 33/59 (55.93%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 TRKKR PY+++QT+ LE E++ + Y+TR++R EI+ L L++RQ+K+WFQNRRMK KK+ Sbjct: 1 TRKKRCPYTKHQTLELEKEFLFSMYLTRERRLEISHLLSLTDRQVKIWFQNRRMKLKKM 59
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Yeast
Match: YOX1 (Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication [Source:SGD;Acc:S000004489]) HSP 1 Score: 48.1358 bits (113), Expect = 1.799e-6 Identity = 23/78 (29.49%), Postives = 44/78 (56.41%), Query Frame = 2 Query: 989 ICSTVKSITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 I + ++ K E K R+KR+ S + IL++E+ +++KR E+A H++E+ +++WFQN+R K+ Sbjct: 156 ITHSQETFPKKEPKIDNAPLARRKRRRTSSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKR 233
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Nematostella
Match: MOXB (MoxB; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR28]) HSP 1 Score: 73.1738 bits (178), Expect = 4.978e-16 Identity = 36/73 (49.32%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 1019 SENKSSETV-KTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 S+ KS++ + K RK+R ++++Q LE+E+ N Y+TR +R+EIA L L+ERQ+KVWFQNRRMK K++K + Sbjct: 5 SDPKSAKNLGKKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKGK 77
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Nematostella
Match: MOXC (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR27]) HSP 1 Score: 70.4774 bits (171), Expect = 2.902e-15 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 1022 ENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGG 1240 E + RK+R +S+YQ LE E+ N Y+TR +R+EIA L L ERQ+KVWFQNRRMK K + RGG Sbjct: 5 ERNEDAKSRKRKERTVFSKYQLTELEREFCRNNYLTRLRRYEIAVSLDLGERQVKVWFQNRRMKWK--RGRGG 75
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Nematostella
Match: MOX1 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR25]) HSP 1 Score: 64.6994 bits (156), Expect = 2.877e-13 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 1079 YQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIK 1228 +Q LE+E+ N Y+TR +R+EIA L L+ERQ+KVWFQNRRMK K++K Sbjct: 2 HQLRELENEFTRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVK 51
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Nematostella
Match: EDO33847 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR26]) HSP 1 Score: 63.929 bits (154), Expect = 3.334e-13 Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 2 Query: 1079 YQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIK 1228 +Q LE+E++ N Y+TR +R+EIA L L+ERQ+KVWFQNRRMK K++K Sbjct: 1 HQLQELENEFIRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVK 50
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Nematostella
Match: EDO42196 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S291]) HSP 1 Score: 61.2326 bits (147), Expect = 3.550e-12 Identity = 29/60 (48.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 1046 KTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI 1225 K R++R ++ QT+ LE E+ N YITR +R+E+A L+L+E Q+K+WFQNRR K K++ Sbjct: 8 KPRRQRTTFTSEQTLKLELEFHQNEYITRSRRFELAACLNLTETQVKIWFQNRRAKDKRL 67
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Medaka
Match: hoxd9 (homeobox D10 [Source:NCBI gene;Acc:101163860]) HSP 1 Score: 86.2705 bits (212), Expect = 1.391e-18 Identity = 38/69 (55.07%), Postives = 56/69 (81.16%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKI-KNRGGYNEI 1252 TRKKR PY++YQT+ LE E++ N Y+TR +R+E+A L L+ERQ+K+WFQNRRMK KK+ + +GG +++ Sbjct: 203 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRFEVARILSLTERQVKIWFQNRRMKMKKMNREKGGKDQL 271
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Medaka
Match: hoxa9 (homeobox A9 [Source:NCBI gene;Acc:100049208]) HSP 1 Score: 84.3445 bits (207), Expect = 6.698e-18 Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRG 1237 TRKKR PY+++Q + LE E++ NTY+TR +R+E+A L+L+ERQ+K+WFQNRRMK KK G Sbjct: 196 TRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 258
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Medaka
Match: ENSORLT00000006345.2 (homeobox protein Hox-A10 [Source:NCBI gene;Acc:101161418]) HSP 1 Score: 85.5001 bits (210), Expect = 8.923e-18 Identity = 42/88 (47.73%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 1001 VKSITKSENKSS-ETVKT-RKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNRGGYNEITS 1258 +K K+EN ++ T K+ RKKR PY+++QT+ LE E++ N Y+TR++R EI+ +HL++RQ+K+WFQNRRMK KK+ E+TS Sbjct: 287 IKGGAKTENMANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRRMKLKKMTRENRIRELTS 374
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Medaka
Match: ENSORLT00000001667.2 (homeobox protein Hox-D9b [Source:NCBI gene;Acc:101175260]) HSP 1 Score: 84.3445 bits (207), Expect = 1.382e-17 Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK--IKNRGGYNE 1249 TRKKR PY+++QT+ LE E++ N Y+TR +R E+A L+L+ERQ+K+WFQNRRMK KK I+ R NE Sbjct: 247 TRKKRCPYTKHQTLELEKEFLYNMYLTRDRRLEVAGLLNLTERQVKIWFQNRRMKMKKLMIRERRSMNE 315
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Medaka
Match: hoxb9a (homeobox B9 [Source:NCBI gene;Acc:100049206]) HSP 1 Score: 82.8037 bits (203), Expect = 3.115e-17 Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 2 Query: 1049 TRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 +RKKR PY++YQT+ LE E++ N Y+TR +R E+A L+L+ERQ+K+WFQNRRMK KK Sbjct: 217 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRRMKMKK 274
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Planmine SMEST
Match: SMESG000033048.1 (SMESG000033048.1) HSP 1 Score: 121.709 bits (304), Expect = 3.952e-30 Identity = 53/76 (69.74%), Postives = 66/76 (86.84%), Query Frame = 2 Query: 1007 SITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 S+T++E +++RKKRKPY+RYQTM+LESE+ GN YITRQKRWEI+CKLHLSERQ+KVWFQNRRMK KK++ R Sbjct: 318 SLTEAE------MRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTR 387
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Planmine SMEST
Match: SMESG000022668.1 (SMESG000022668.1) HSP 1 Score: 107.457 bits (267), Expect = 2.845e-27 Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 977 GNSNICSTVKSITKSENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKKIKNR 1234 + N+ S+ + KS K + K R KR+PYSRYQ M+LESEY+ YI+RQKRW+IACKL+LSERQIK+WFQNRRMK KK K + Sbjct: 78 ASENLPSSCPNSNKSVEKEEKDQKERTKRRPYSRYQLMVLESEYINTEYISRQKRWDIACKLNLSERQIKIWFQNRRMKHKKNKEK 163
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Planmine SMEST
Match: SMESG000054107.1 (SMESG000054107.1) HSP 1 Score: 100.908 bits (250), Expect = 1.595e-23 Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 2 Query: 1046 KTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRM 1210 + RKKRKPY+RYQ ++LESE+ N+YITRQKRWEI+CKL+LSERQIKVWFQNRRM Sbjct: 240 RCRKKRKPYTRYQNLVLESEFNSNSYITRQKRWEISCKLNLSERQIKVWFQNRRM 294
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Planmine SMEST
Match: SMESG000044469.1 (SMESG000044469.1) HSP 1 Score: 77.0258 bits (188), Expect = 2.298e-16 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 2 Query: 1022 ENKSSETVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 +NKS + + ++ R+ YSR QT+ LE E+ N Y+TR++R EIA + LSERQIK+WFQNRRMK KK Sbjct: 96 KNKSDRSAEYKRSRQAYSRQQTLELEKEFYYNQYLTRRRRIEIANSVCLSERQIKIWFQNRRMKYKK 162
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Planmine SMEST
Match: SMESG000043155.1 (SMESG000043155.1) HSP 1 Score: 80.1073 bits (196), Expect = 4.196e-16 Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 2 Query: 1040 TVKTRKKRKPYSRYQTMILESEYVGNTYITRQKRWEIACKLHLSERQIKVWFQNRRMKTKK 1222 +V+ R+ R+ YSR+QT+ LE E+ N Y+TR++R EIA L LSERQIK+WFQNRRMK KK Sbjct: 248 SVQKRRGRQTYSRHQTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRRMKLKK 308 The following BLAST results are available for this feature:
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Ba vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30015704 ID=SMED30015704|Name=Hox class homeodomain protein DjAbd-Ba|organism=Schmidtea mediterranea sexual|type=transcript|length=1444bpback to top protein sequence of SMED30015704-orf-1 >SMED30015704-orf-1 ID=SMED30015704-orf-1|Name=SMED30015704-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=318bp MNEDYHAFSAYTSYHYPNYYHHNNPHNSNPSYECLSRNKSNPFPQCIMGSback to top Aliases
The feature 'Hox class homeodomain protein DjAbd-Ba' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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