fucolectin
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30015677 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 16
Homology
BLAST of fucolectin vs. Ensembl Zebrafish
Match: si:ch73-359m17.2 (si:ch73-359m17.2 [Source:ZFIN;Acc:ZDB-GENE-141222-90]) HSP 1 Score: 58.151 bits (139), Expect = 2.105e-10 Identity = 38/131 (29.01%), Postives = 59/131 (45.04%), Query Frame = 1 Query: 115 PYWSSDKAVDGNYDSKMVDGHCYH-SKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVF 504 P +++ AVDGN ++ G C H S+E N WW + L +S V +V I +R DCC R + + + + N + G T F + R L + P ++ L+LCE+EVF Sbjct: 40 PNGNAEHAVDGNTEADYRKGSCTHTSREFN--PWWRVDLGGVSSVNKVTITNRGDCCEERIRGAQIRIGDSLENNGNNNQLAATLLDAIKGS-------QTFEFQPIQGRYLNVFLPGNDETLSLCEVEVF 161
BLAST of fucolectin vs. Ensembl Zebrafish
Match: si:ch73-359m17.2 (si:ch73-359m17.2 [Source:ZFIN;Acc:ZDB-GENE-141222-90]) HSP 1 Score: 59.3066 bits (142), Expect = 2.961e-10 Identity = 39/134 (29.10%), Postives = 60/134 (44.78%), Query Frame = 1 Query: 115 PYWSSDKAVDGNYDSKMVDGHCYH-SKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYP 513 P +++ AVDGN ++ G C H S+E N WW + L +S V +V I +R DCC R + + + + N + G T F + R L + P ++ L+LCE+EVF P Sbjct: 40 PNGNAEHAVDGNTEADYRKGSCTHTSREFN--PWWRVDLGGVSSVNKVTITNRGDCCEERIRGAQIRIGDSLENNGNNNQLAATLLDAIKGS-------QTFEFQPIQGRYLNVFLPGNDETLSLCEVEVFSGP 164
BLAST of fucolectin vs. Ensembl Zebrafish
Match: si:ch73-359m17.2 (si:ch73-359m17.2 [Source:ZFIN;Acc:ZDB-GENE-141222-90]) HSP 1 Score: 57.3806 bits (137), Expect = 1.047e-9 Identity = 38/131 (29.01%), Postives = 59/131 (45.04%), Query Frame = 1 Query: 115 PYWSSDKAVDGNYDSKMVDGHCYH-SKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVF 504 P +++ AVDGN ++ G C H S+E N WW + L +S V +V I +R DCC R + + + + N + G T F + R L + P ++ L+LCE+EVF Sbjct: 40 PNGNAEHAVDGNTEADYRKGSCTHTSREFN--PWWRVDLGGVSSVNKVTITNRGDCCEERIRGAQIRIGDSLENNGNNNQLAATLLDAIKGS-------QTFEFQPIQGRYLNVFLPGNDETLSLCEVEVF 161
BLAST of fucolectin vs. Ensembl Zebrafish
Match: si:ch211-215k15.4 (si:ch211-215k15.4 [Source:ZFIN;Acc:ZDB-GENE-131127-215]) HSP 1 Score: 49.2914 bits (116), Expect = 7.767e-7 Identity = 51/178 (28.65%), Postives = 81/178 (45.51%), Query Frame = 1 Query: 1 VFINSSKFLLFVFQITT---AQNALLSRGRPTFAANVIDNQPYWSSD----KAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYP 513 VF+ F++ F TT A+N LS GR T ++++ N W+ + A+DGN D G C + E+ WW + L VV + I +R DCC R ++ + + ++N A +S P G +T + R + + + + L LCELEV+GYP Sbjct: 5 VFVLLHIFVMPYFTDTTTAKARNLALS-GRAT-QSDLLKNP--WTGEALASNAIDGNRDPDFYHGSCT-ATEVQDDPWWRLDLLDTYVVKSITITNRKDCCPERLDGAEVHIGNSLLNNGNSNPL-AAKISSIPA----GRSLTFKWKKGISGRYINVILRGSNRILTLCELEVYGYP 172
BLAST of fucolectin vs. Ensembl Zebrafish
Match: si:ch211-215k15.4 (si:ch211-215k15.4 [Source:ZFIN;Acc:ZDB-GENE-131127-215]) HSP 1 Score: 48.1358 bits (113), Expect = 1.923e-6 Identity = 45/161 (27.95%), Postives = 73/161 (45.34%), Query Frame = 1 Query: 43 ITTAQNALLSRGRPTFAANVIDNQPYWSSD----KAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYP 513 + A+N LS GR T ++++ N W+ + A+DGN D G C + E+ WW + L VV + I +R DCC R ++ + + ++N A +S P G +T + R + + + + L LCELEV+GYP Sbjct: 17 LIAARNLALS-GRAT-QSDLLKNP--WTGEALASNAIDGNRDPDFYHGSCT-ATEVQDDPWWRLDLLDTYVVKSITITNRKDCCPERLDGAEVHIGNSLLNNGNSNPL-AAKISSIPA----GRSLTFKWKKGISGRYINVILRGSNRILTLCELEVYGYP 167
BLAST of fucolectin vs. Ensembl Xenopus
Match: ncapg2 (non-SMC condensin II complex subunit G2 [Source:Xenbase;Acc:XB-GENE-1002744]) HSP 1 Score: 58.5362 bits (140), Expect = 9.656e-10 Identity = 43/145 (29.66%), Postives = 62/145 (42.76%), Query Frame = 1 Query: 112 QPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGP-----PPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMP 531 +P +S+ A DG+ ++ M G C H+ N WW + L V +VVI +R DCC R LL V N + P E T++ R+ R L + P E+ L LCE+EV+G F +P Sbjct: 183 RPEYSASNANDGDANTDMRYGSCSHTGNDNPA-WWQLDLKKRYKVDKVVIVNRGDCCGER--LLGAQVR-------------VGNTANLNNPLCGTVTDVSEETITVSCHRMEGRYLTVVIPGREETLQLCEVEVYGQVFRAFIP 311 HSP 2 Score: 51.9878 bits (123), Expect = 1.561e-7 Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 88 FAANVIDNQPY---WSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXD-FANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFG 507 + A+V + Y +S+D+A+DG+ D+ M+ C +++ +S WW + ++ V VVI +R+DCC+ R LL V +S + +VS + TL L R +++ P E+ L LCE+EV+G Sbjct: 30 YGADVKQSSTYGLGFSADRAIDGSKDNNMLKRPCTQTQK-DSPAWWQADMINIYKVETVVIVNRMDCCSAR--LLGAEVRVGDSPDNNNPVCGIITDVS---------KSTITLCCNGLEGRYVSVVIPGREEHLTLCEVEVYG 161
BLAST of fucolectin vs. Ensembl Xenopus
Match: ncapg2 (non-SMC condensin II complex subunit G2 [Source:Xenbase;Acc:XB-GENE-1002744]) HSP 1 Score: 58.151 bits (139), Expect = 1.093e-9 Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 1 Query: 112 QPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXX-XXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMP 531 +P +S+ A DG+ ++ M G C H+ N WW + L V +VVI +R DCC R LL V N+ +L+ +VS E T++ R+ R L + P E+ L LCE+EV+G F +P Sbjct: 183 RPEYSASNANDGDANTDMRYGSCSHTGNDNPA-WWQLDLKKRYKVDKVVIVNRGDCCGER--LLGAQVRVGNTANLNNPLCGTVTDVS---------EETITVSCHRMEGRYLTVVIPGREETLQLCEVEVYGQVFRAFIP 311
BLAST of fucolectin vs. Ensembl Xenopus
Match: ncapg2 (non-SMC condensin II complex subunit G2 [Source:Xenbase;Acc:XB-GENE-1002744]) HSP 1 Score: 56.9954 bits (136), Expect = 3.652e-9 Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 88 FAANVIDNQPY---WSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXX----XXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFG 507 + A+V + Y +S+D+A+DG+ D+ M+ C +++ +S WW + ++ V VVI +R+DCC+ R LL V +S + NDF+N ITTL R +++ P + LNLCELEV+G Sbjct: 94 YGADVKQSSTYGLGFSADRAIDGSKDNNMLKRPCTQTQK-DSPAWWQADMINIYKVETVVIVNRMDCCSAR--LLGAEVRVGDSPDNNNPVCGIINDFSN------------LITTLCCDGKEGRYVSVVIPGRNEYLNLCELEVYG 225 HSP 2 Score: 51.2174 bits (121), Expect = 3.536e-7 Identity = 38/130 (29.23%), Postives = 59/130 (45.38%), Query Frame = 1 Query: 115 PYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVF 504 P +++ A+DGN +S M+ G C H+ N WW + L V +V+I +R DCC R LL V +S+S P TL+ + R +++ P + L LCE+EV+ Sbjct: 389 PMYNAATAIDGNTNSNMMAGSCSHTGNDNPA-WWQLDLKKPYRVEKVLIVNRGDCCGER--LLGAEVRVGSSSSRDNPVCGVVTDVSKP--------TITLSCNGMGGRYVSVVIPGRPETLQLCEVEVY 507
BLAST of fucolectin vs. Ensembl Xenopus
Match: ncapg2 (non-SMC condensin II complex subunit G2 [Source:Xenbase;Acc:XB-GENE-1002744]) HSP 1 Score: 56.9954 bits (136), Expect = 3.855e-9 Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 88 FAANVIDNQPY---WSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXX----XXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFG 507 + A+V + Y +S+D+A+DG+ D+ M+ C +++ +S WW + ++ V VVI +R+DCC+ R LL V +S + NDF+N ITTL R +++ P + LNLCELEV+G Sbjct: 30 YGADVKQSSTYGLGFSADRAIDGSKDNNMLKRPCTQTQK-DSPAWWQADMINIYKVETVVIVNRMDCCSAR--LLGAEVRVGDSPDNNNPVCGIINDFSN------------LITTLCCDGKEGRYVSVVIPGRNEYLNLCELEVYG 161 HSP 2 Score: 51.2174 bits (121), Expect = 3.222e-7 Identity = 38/130 (29.23%), Postives = 59/130 (45.38%), Query Frame = 1 Query: 115 PYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVF 504 P +++ A+DGN +S M+ G C H+ N WW + L V +V+I +R DCC R LL V +S+S P TL+ + R +++ P + L LCE+EV+ Sbjct: 325 PMYNAATAIDGNTNSNMMAGSCSHTGNDNPA-WWQLDLKKPYRVEKVLIVNRGDCCGER--LLGAEVRVGSSSSRDNPVCGVVTDVSKP--------TITLSCNGMGGRYVSVVIPGRPETLQLCEVEVY 443
BLAST of fucolectin vs. Ensembl Xenopus
Match: fucolectin (x-epilectin [Source:NCBI gene;Acc:100144955]) HSP 1 Score: 55.0694 bits (131), Expect = 1.282e-8 Identity = 37/131 (28.24%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 115 PYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFG 507 P +++ A+DGN D+ M+ G C H+ N WW + L V +VVI +R DCC R V + + + +VS + TL+ + R +++ P + L LCE+EV+G Sbjct: 206 PKYNAAAAIDGNKDTNMMAGSCSHTNSDNPA-WWQLDLKKRYQVEKVVIVNRGDCCGERLRGAEIRVGDSPDNNNPVCAT-VTDVS---------QLTLTLSCKGIPGRYVSVVIPGRAEYLQLCEVEVYG 325
BLAST of fucolectin vs. UniProt/SwissProt
Match: sp|Q9I929|FUCL3_ANGJA (Fucolectin-3 OS=Anguilla japonica OX=7937 PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.979e-7 Identity = 29/82 (35.37%), Postives = 41/82 (50.00%), Query Frame = 1 Query: 55 QNALLSRGRPTFAANVIDN-QPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTS 297 Q + RGR T +A + + + A+DGN DS G C H++ NS WW + L + +T V I +R DCC R S Sbjct: 31 QENVALRGRATQSAQLKGEFAGFAHASNAIDGNRDSNYHHGSCSHTEGDNS--WWRVDLKQVYTITSVTITNRGDCCGERIS 110
BLAST of fucolectin vs. UniProt/SwissProt
Match: sp|Q9I925|FUCL7_ANGJA (Fucolectin-7 OS=Anguilla japonica OX=7937 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 2.379e-7 Identity = 44/150 (29.33%), Postives = 63/150 (42.00%), Query Frame = 1 Query: 55 QNALLSRGRPTFAANVI-DNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEV 501 Q + RGR T +A + D+ + A+DGN DS G C H++ WW + L + +T V I +R DCC R S + + N GP GE T + R + + P AE L+LCE+EV Sbjct: 40 QENVALRGRATQSAQLRGDHSGIAHASNAIDGNRDSVFYHGSCTHTEA--DKPWWRVDLLQVYTITSVTITNRGDCCEERISGARILIGKHLENNGINNPQ-----CSVIGPMAAGETKTFRCPQPMIGRYVTVYLPKAES-LHLCEVEV 181
BLAST of fucolectin vs. UniProt/SwissProt
Match: sp|Q7SIC1|FUCL_ANGAN (Fucolectin OS=Anguilla anguilla OX=7936 PE=1 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 3.789e-6 Identity = 28/82 (34.15%), Postives = 39/82 (47.56%), Query Frame = 1 Query: 55 QNALLSRGRPTFAANVIDNQPYWS-SDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTS 297 Q + RG+ T +A + S + A+DGN DS G C HS + WW + L + +T V I +R DCC R S Sbjct: 8 QENVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSG-QANPWWRVDLLQVYTITSVTITNRGDCCGERIS 88
BLAST of fucolectin vs. TrEMBL
Match: A0A1S3KEU6 (fucolectin OS=Lingula unguis OX=7574 GN=LOC106181345 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.644e-15 Identity = 57/188 (30.32%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 67 LSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNF-TRLYARTLAISKPFAEQ-PLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 +++G+P ++ + +++ AVDGNYD G C H+++ WWL+ L+S +++ VV+ +R +CC+ R L++F V S +++ + + YPG P G T+L+ + L R + I K ++ PL LCE+EV G+P T + RA SL I T V S +C++ Sbjct: 26 VAKGKPAHQSSTYMYEGSYNASLAVDGNYDDNWQQGSCSHTED-GQGNWWLVDLESTAILAGVVLTNRGECCSER--LVNFEVRVGYSFVGTSSFTQYRLCASYPGVAPVGN--TSLSCRSPLRGRYVLIIKVGSDDLPLQLCEVEVHGFPSTTTFQLVGAGARA-----SLSPISTLNVRSLTECSI 203
BLAST of fucolectin vs. TrEMBL
Match: A0A3Q4HN98 (Si:ch211-215k15.4 OS=Neolamprologus brichardi OX=32507 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.251e-13 Identity = 50/161 (31.06%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 34 VFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFT-RLYARTLAISKPFAEQPLNLCELEVFGYP 513 + ++T QN L RG+ T + + DN P ++ A+DGN +S+ DG C H+ + + WW + L ++T V I++R DCC +R S L ++ + + + +S GE + L FT R+ R + ++ P + + L LCE+EV+GYP Sbjct: 15 ISSVSTYQNVAL-RGKATQSTRLTDN-PVSAAHNAIDGNRNSEFSDGSCTHTND-QTNPWWRVDLLQSYIITSVTIFNRGDCCQHRLSGLEIHI-GNSLNNEGLENPKVGTIS----EGRTGE--SKLTFTNRVEGRYITLTLPGSSRILTLCEVEVYGYP 165
BLAST of fucolectin vs. TrEMBL
Match: A0A1S3HEB9 (fucolectin-like OS=Lingula unguis OX=7574 GN=LOC106153850 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.045e-12 Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 67 LSRGRPTFAANVIDNQ----PYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTR-LYARTLAISKPFA-EQPLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 L++G+P + ++ N+ + + +AVDGNY+ G C H+ + WWL+ L + + V V+I +R DCC+YR L +F V S S++ + + YPG P G T+L+ L R + I K + +Q L LCE+EV G+ M FK + A +L + T V S ++C++ Sbjct: 33 LAKGKPAYQSSTYQNRYGITDLYYASRAVDGNYNDNGNHGSCSHT-DAGQGGWWLVDLKTTARVAGVIITNRRDCCSYR--LTNFEVKVGTSYDNSSSFTQYKLCASYPGQAPVGN--TSLSCESPLTGRYVLIIKVGSDDQALQLCEVEVHGFR----RSMKFKQV-AADARATLVPLSTLNVGSLIECSI 214
BLAST of fucolectin vs. TrEMBL
Match: A0A3P8NS80 (Si:ch211-215k15.4 OS=Astatotilapia calliptera OX=8154 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.479e-12 Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 34 VFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFT-RLYARTLAISKPFAEQPLNLCELEVFGYP 513 + ++T QN L RG+ T + + DN P ++ A+DGN +S+ G C H+ E + WW + L ++T V I++R DCC +R S L ++ + + + +S GE + L FT R+ R + ++ P + + L LCE+EV+GYP Sbjct: 15 ISSVSTYQNVAL-RGKATQSTRLTDN-PVSAAHNAIDGNRNSEFSVGSCTHTNE-QTNPWWRVDLLQSYIITSVTIFNRGDCCQHRLSGLEIHI-GNSLNNEGLENPKVGTIS----EGRTGE--SKLTFTNRVEGRYVTLTLPGSGRILTLCEVEVYGYP 165
BLAST of fucolectin vs. TrEMBL
Match: A0A3P9BXB6 (Si:ch211-215k15.4 OS=Maylandia zebra OX=106582 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.479e-12 Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 34 VFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFT-RLYARTLAISKPFAEQPLNLCELEVFGYP 513 + ++T QN L RG+ T + + DN P ++ A+DGN +S+ G C H+ E + WW + L ++T V I++R DCC +R S L ++ + + + +S GE + L FT R+ R + ++ P + + L LCE+EV+GYP Sbjct: 15 ISSVSTYQNVAL-RGKATQSTRLTDN-PVSAAHNAIDGNRNSEFSVGSCTHTNE-QTNPWWRVDLLQSYIITSVTIFNRGDCCQHRLSGLEIHI-GNSLNNEGLENPKVGTIS----EGRTGE--SKLTFTNRVEGRYVTLTLPGSGRILTLCEVEVYGYP 165
BLAST of fucolectin vs. Ensembl Cavefish
Match: ENSAMXT00000008051.2 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000995.1:49634:61503:-1 gene:ENSAMXG00000007830.2 transcript:ENSAMXT00000008051.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.6102 bits (135), Expect = 3.278e-9 Identity = 45/169 (26.63%), Postives = 70/169 (41.42%), Query Frame = 1 Query: 28 LFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPP--------PPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGY 510 +F + + +N L RG+ T ++ D P KA+D N D+ G C H+ + WW + L +T +VI +R DCC R +V + ++ G P P G+ T + R + + P + Q L LCE+EVFGY Sbjct: 166 VFGYHPSQVKN-LAPRGKATQSSLAFDGHP----SKAIDKNKDTNYHQGSCTHTV-IQQNPWWRVDLLDEFTITSIVITNRGDCCAGRLEGAEIHVGNSL-------------INNGNGNPRVEVIKSIPAGKSQTFHLKKEVSGRYVNLIIPGSNQILTLCEVEVFGY 315
BLAST of fucolectin vs. Ensembl Cavefish
Match: ENSAMXT00000056118.1 (fucolectin-4-like [Source:NCBI gene;Acc:103037148]) HSP 1 Score: 52.373 bits (124), Expect = 2.184e-8 Identity = 36/126 (28.57%), Postives = 57/126 (45.24%), Query Frame = 1 Query: 133 KAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGY 510 A+DGN +S DG C H+ N+ WW + L +T + I +R DCC R + V + + ++N+ S PG T + + R + + P + L LCE+EV+GY Sbjct: 48 NAIDGNPNSNYHDGSCSHTSTQNN-PWWRVDLLYKYKITSITITNRGDCCANRINGAEIRVGNSLYNNGNSNTRVAVVSSILPGKS------VTFKLSNISGRYINVILPGYNRILTLCEVEVYGY 166
BLAST of fucolectin vs. Ensembl Cavefish
Match: ENSAMXT00000052670.1 (fucolectin-4-like [Source:NCBI gene;Acc:103030634]) HSP 1 Score: 51.6026 bits (122), Expect = 1.077e-7 Identity = 37/127 (29.13%), Postives = 57/127 (44.88%), Query Frame = 1 Query: 133 KAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYP 513 A+DGN DS G C + WW + L +T + I +R DCC R + ++ + + + N +A V P G+ +T T L R + + P + LN CE+EV+GYP Sbjct: 53 NAIDGNTDSNYDHGSCT-ATTWQQNPWWRVDLLDEYTITSITITNRGDCCAERINGAEIHIGNSLVNNGNNNP--WAGVI---STIPAGKSMTFTFQTGLSGRYINVVIPGDNRLLNFCEIEVYGYP 173
BLAST of fucolectin vs. Ensembl Cavefish
Match: ENSAMXT00000042585.1 (fucolectin-4-like [Source:NCBI gene;Acc:103030634]) HSP 1 Score: 51.6026 bits (122), Expect = 1.118e-7 Identity = 37/127 (29.13%), Postives = 57/127 (44.88%), Query Frame = 1 Query: 133 KAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYP 513 A+DGN DS G C + WW + L +T + I +R DCC R + ++ + + + N +A V P G+ +T T L R + + P + LN CE+EV+GYP Sbjct: 53 NAIDGNTDSNYDHGSCT-ATTWQQNPWWRVDLLDEYTITSITITNRGDCCAERINGAEIHIGNSLVNNGNNNP--WAGVI---STIPAGKSMTFTFQTGLSGRYINVVIPGDNRLLNFCEIEVYGYP 173
BLAST of fucolectin vs. Ensembl Cavefish
Match: ENSAMXT00000054425.1 (fucolectin-4-like [Source:NCBI gene;Acc:103030634]) HSP 1 Score: 51.6026 bits (122), Expect = 1.121e-7 Identity = 37/127 (29.13%), Postives = 57/127 (44.88%), Query Frame = 1 Query: 133 KAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYP 513 A+DGN DS G C + WW + L +T + I +R DCC R + ++ + + + N +A V P G+ +T T L R + + P + LN CE+EV+GYP Sbjct: 53 NAIDGNTDSNYDHGSCT-ATTWQQNPWWRVDLLDEYTITSITITNRGDCCAERINGAEIHIGNSLVNNGNNNP--WAGVI---STIPAGKSMTFTFQTGLSGRYINVVIPGDNRLLNFCEIEVYGYP 173
BLAST of fucolectin vs. Ensembl Nematostella
Match: EDO29994 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T225]) HSP 1 Score: 53.1434 bits (126), Expect = 1.296e-8 Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 127 SDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVF 504 + AVDGN D + C H+ + WW + L + V +V I +R DCC + L + + +S + + N+N +Y P G+ +T L R ++I P A+Q L LCE+EV+ Sbjct: 158 ASHAVDGNRDGNYGNWSCTHTN-AETNPWWRVDLGASHRVAQVFIVARSDCCGDKQELRNIVIHVGDSLANNGNTNARCGGAY---TIPQGKNLTITCSPALQGRYVSIMLPGAKQILTLCEVEVY 279
BLAST of fucolectin vs. Ensembl Nematostella
Match: EDO25871 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TDH1]) HSP 1 Score: 50.8322 bits (120), Expect = 1.351e-8 Identity = 41/130 (31.54%), Postives = 61/130 (46.92%), Query Frame = 1 Query: 127 SDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPF 516 ++ AVDG+ + D C +K + S WW + L V+ R+ I +R DCC R L +F + +S + N SY P G + T L R + I P +++ L LCE+EV YPF Sbjct: 3 AEHAVDGDRSGRFADLSCTETK-VQSNPWWRVDLQKSYVILRLFIVNRADCCGER--LDNFEIRIGDSLENNGTDNPSCGSSYI---IPHGGSKSISCHTLLKGRYVNIWIPGSDRRLTLCEVEV--YPF 124
BLAST of fucolectin vs. Ensembl Nematostella
Match: EDO34462 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPB1]) HSP 1 Score: 49.6766 bits (117), Expect = 3.965e-8 Identity = 36/131 (27.48%), Postives = 54/131 (41.22%), Query Frame = 1 Query: 127 SDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLN-----FTRLYARTLAISKPFAEQPLNLCELEVF 504 ++ AVDGN + + D C +K + S WW + L V+ R+ I +R DCC +R + D + P G +I N T L R + I P + L LCE+EV+ Sbjct: 11 AEHAVDGNRNGRYFDLSCTETK-VQSNPWWRVDLQKSYVILRLFIVNRADCCNHRLDNFEIRI------------GDSLENNGNDNPTCGGSYIIPKNGSIACHTLLKGRYVNIWIPGPNRLLTLCEVEVY 128
BLAST of fucolectin vs. Ensembl Nematostella
Match: EDO33194 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSX9]) HSP 1 Score: 49.2914 bits (116), Expect = 5.103e-8 Identity = 39/125 (31.20%), Postives = 58/125 (46.40%), Query Frame = 1 Query: 127 SDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEV 501 ++ AVDGN + D C +K + S WW + L V+ R+ I +R DCC R L +F + +S + N SY P G + T L R + I P +++ L LCE+EV Sbjct: 1 AEHAVDGNRSGRFSDLSCTETK-VQSNPWWRVDLQKSYVILRLFIVNRADCCGER--LDNFEIRIGDSLENNGTDNPSCGSSYI---IPHGGSKSISCHTLLKGRYVNIWIPGSDRRLTLCEVEV 119
BLAST of fucolectin vs. Ensembl Nematostella
Match: EDO40750 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6H5]) HSP 1 Score: 44.669 bits (104), Expect = 3.242e-6 Identity = 42/132 (31.82%), Postives = 56/132 (42.42%), Query Frame = 1 Query: 127 SDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIK 522 S+ AVDGN C S + WW + L V R+ + +R DCC R L +F + +S N N SY P G T T L R + I ++ L LCE+EV YPFI+ Sbjct: 24 SNHAVDGNRSGNYYQKSC-SSTTAQTNPWWRVDLQKSHVNLRLFVVNRADCCGER--LDNFEIRIGDSLVNDGNDNPSCGSSYI---IPQGRGNTIACHTLLKGRYVNIWIQGPDKVLTLCEVEV--YPFIE 147
BLAST of fucolectin vs. Planmine SMEST
Match: SMESG000046841.1 (SMESG000046841.1) HSP 1 Score: 382.104 bits (980), Expect = 2.211e-136 Identity = 198/208 (95.19%), Postives = 200/208 (96.15%), Query Frame = 1 Query: 1 VFINSSKFLLFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 VFINSSKFLLFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYD MVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSR +CCT RTSLLSFYVSYTNSTSLSTNSNDF NVSYYPG PPPGEFITTLNFTRLYARTLAISKPFAEQP NLCELEV+GYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLD AM Sbjct: 4 VFINSSKFLLFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDGNMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRTECCTQRTSLLSFYVSYTNSTSLSTNSNDFTNVSYYPGSPPPGEFITTLNFTRLYARTLAISKPFAEQPFNLCELEVYGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDSAM 211
BLAST of fucolectin vs. Planmine SMEST
Match: SMESG000046835.1 (SMESG000046835.1) HSP 1 Score: 296.204 bits (757), Expect = 3.313e-100 Identity = 152/190 (80.00%), Postives = 164/190 (86.32%), Query Frame = 1 Query: 55 QNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 +N LLSR RPTFAANVI N P W+SDKAVDGNYD M G+CYHS+ELNSTKWWL+ILDSLSVVTRVVIYSR +CCT RTSLLSFYVSYTNSTSLSTNSNDF N+SYY GPPPPGEFITTLNFTRLY RTLAISKPF EQ LN+CELEV+GY FIK M M FKY S+YDSLGN GTFPV SN+DCA+ Sbjct: 188 RNQLLSRSRPTFAANVIANYPLWTSDKAVDGNYDCNMHHGYCYHSEELNSTKWWLVILDSLSVVTRVVIYSRTECCTQRTSLLSFYVSYTNSTSLSTNSNDFVNISYYVGPPPPGEFITTLNFTRLYMRTLAISKPFGEQALNICELEVYGYTFIKKMSMIFKYFGRQSLYDSLGNFGTFPVQSNIDCAI 377
BLAST of fucolectin vs. Planmine SMEST
Match: SMESG000024705.1 (SMESG000024705.1) HSP 1 Score: 285.034 bits (728), Expect = 4.655e-98 Identity = 150/208 (72.12%), Postives = 168/208 (80.77%), Query Frame = 1 Query: 1 VFINSSKFLLFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 +FIN+ L+ + +I A+++LLS GRPTFA N + W+SDKAVDGNY+ M G CYHS+ N KWWL+ILDSLSVVT+VVIYSR DCCT RTSLLSFYVSY +STSLS N+NDF NVSYY GPPPPGEFITTLNFTRLYARTLAISKP E +NLCELEV+GYPF KTM MTFKY ALSIYDSLGN GTFPV SNLDCAM Sbjct: 4 IFINNIYLLVIIVEIIVAEDSLLSIGRPTFANNAMFP---WTSDKAVDGNYNGNMSKGSCYHSETFNYDKWWLVILDSLSVVTKVVIYSRTDCCTQRTSLLSFYVSYKSSTSLSNNNNDFVNVSYYAGPPPPGEFITTLNFTRLYARTLAISKPSLEDAINLCELEVYGYPFTKTMSMTFKYFGALSIYDSLGNFGTFPVQSNLDCAM 208
BLAST of fucolectin vs. Planmine SMEST
Match: SMESG000024705.1 (SMESG000024705.1) HSP 1 Score: 279.256 bits (713), Expect = 2.986e-95 Identity = 146/199 (73.37%), Postives = 162/199 (81.41%), Query Frame = 1 Query: 28 LFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 + + +I A+++LLS GRPTFA N + W+SDKAVDGNY+ M G CYHS+ N KWWL+ILDSLSVVT+VVIYSR DCCT RTSLLSFYVSY +STSLS N+NDF NVSYY GPPPPGEFITTLNFTRLYARTLAISKP E +NLCELEV+GYPF KTM MTFKY ALSIYDSLGN GTFPV SNLDCAM Sbjct: 52 VIIVEIIVAEDSLLSIGRPTFANNAMFP---WTSDKAVDGNYNGNMSKGSCYHSETFNYDKWWLVILDSLSVVTKVVIYSRTDCCTQRTSLLSFYVSYKSSTSLSNNNNDFVNVSYYAGPPPPGEFITTLNFTRLYARTLAISKPSLEDAINLCELEVYGYPFTKTMSMTFKYFGALSIYDSLGNFGTFPVQSNLDCAM 247
BLAST of fucolectin vs. Planmine SMEST
Match: SMESG000024886.1 (SMESG000024886.1) HSP 1 Score: 248.825 bits (634), Expect = 1.833e-83 Identity = 134/225 (59.56%), Postives = 156/225 (69.33%), Query Frame = 1 Query: 1 VFINSSKFLLFVFQITTAQ-----------------NALLSRGRPTFAANVIDNQPYWSSDKAVDGNYDSKMVDGHCYHSKELNSTKWWLIILDSLSVVTRVVIYSRVDCCTYRTSLLSFYVXXXXXXXXXXXXXDFANVSYYPGPPPPGEFITTLNFTRLYARTLAISKPFAEQPLNLCELEVFGYPFIKTMPMTFKYLRALSIYDSLGNIGTFPVLSNLDCAM 624 +F N L+ + +I TAQ + +LSRGRPTF +I W KAVDGNYD +G C+HS+ N KWWL+ILDSLSVVT+VVIYSR DCCT RTS +SFYVSY NSTSL+ N NDF N+SYY GPPPPGE ITTLNF RLYARTLAISKP A +NLCELEV+GYP IK+M FKY LS+YDSLGN+G F V+SNLDCA+ Sbjct: 4 LFKNEIYLLVIILKIITAQGNEIYFKETIYSLSFVLDLILSRGRPTFGT-IIAGYSVWEPQKAVDGNYDGNQFNGSCFHSEGPNVNKWWLVILDSLSVVTKVVIYSRTDCCTNRTSFISFYVSYKNSTSLTNNMNDFFNISYYAGPPPPGEIITTLNFKRLYARTLAISKPLAADHINLCELEVYGYPLIKSMFTLFKYFGTLSLYDSLGNVGIFTVVSNLDCAL 227 The following BLAST results are available for this feature:
BLAST of fucolectin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of fucolectin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of fucolectin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of fucolectin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of fucolectin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of fucolectin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of fucolectin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 3
BLAST of fucolectin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of fucolectin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of fucolectin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of fucolectin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of fucolectin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of fucolectin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of fucolectin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30015677 ID=SMED30015677|Name=fucolectin|organism=Schmidtea mediterranea sexual|type=transcript|length=624bpback to top protein sequence of SMED30015677-orf-1 >SMED30015677-orf-1 ID=SMED30015677-orf-1|Name=SMED30015677-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=208bp VFINSSKFLLFVFQITTAQNALLSRGRPTFAANVIDNQPYWSSDKAVDGNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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