Microsomal triglyceride transfer protein large subunit

Overview
NameMicrosomal triglyceride transfer protein large subunit
Smed IDSMED30015218
Length (bp)2917
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Microsomal triglyceride transfer protein large subunit (SMED30015218) t-SNE clustered cells

Violin plots show distribution of expression levels for Microsomal triglyceride transfer protein large subunit (SMED30015218) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Microsomal triglyceride transfer protein large subunit (SMED30015218) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Microsomal triglyceride transfer protein large subunit (SMED30015218) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30015218

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
gutSMED30015218h1SMcG0003188 dd_Smed_v4_5671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30015218h1SMcG0003188 dd_Smed_v4_5671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30015218h1SMcG0003188 dd_Smed_v4_5671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30015218h1SMcG0003188 Contig41381newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30015218h1SMcG0003188 Contig41381uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Human
Match: MTTP (microsomal triglyceride transfer protein [Source:HGNC Symbol;Acc:HGNC:7467])

HSP 1 Score: 62.7734 bits (151), Expect = 3.457e-9
Identity = 54/255 (21.18%), Postives = 108/255 (42.35%), Query Frame = 2 
Query: 1976 LGIIKD-------SNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
            L I++D       ++ +V     + + H +  +S    S  Y   +  +  S      +I+ S  GI++ S  ++F        +   +     GL     A+  E  E ++    +S  LF  +LRP   F G ++LMS + +A     S+++G  + ID   E+  Q+G+   +   G + +D S  M  +LWY+ ++T +K      +  +  + S    +        + G++F + + F   P   C+ +
Sbjct:  603 LAIVQDILRFEMPASKIVRRVLKEMVAHNYDRFSRSGSSSAYTGYIERSPRSASTYSLDILYSGSGILRRSNLNIFQYIGKAGLHGSQVVIEAQGLEALIAATPDEGEENLDSYAGMSAILFDVQLRPVTFFNGYSDLMSKMLSASGDPISVVKGLILLIDHSQELQLQSGLKANIEVQGGLAIDISGAMEFSLWYRESKTRVKNRVTVVITTDITVDSSFVKAGLETSTETEAGLEFISTVQFSQYPFLVCMQM 857
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Human
Match: MTTP (microsomal triglyceride transfer protein [Source:HGNC Symbol;Acc:HGNC:7467])

HSP 1 Score: 62.3882 bits (150), Expect = 3.917e-9
Identity = 54/255 (21.18%), Postives = 108/255 (42.35%), Query Frame = 2 
Query: 1976 LGIIKD-------SNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
            L I++D       ++ +V     + + H +  +S    S  Y   +  +  S      +I+ S  GI++ S  ++F        +   +     GL     A+  E  E ++    +S  LF  +LRP   F G ++LMS + +A     S+++G  + ID   E+  Q+G+   +   G + +D S  M  +LWY+ ++T +K      +  +  + S    +        + G++F + + F   P   C+ +
Sbjct:  576 LAIVQDILRFEMPASKIVRRVLKEMVAHNYDRFSRSGSSSAYTGYIERSPRSASTYSLDILYSGSGILRRSNLNIFQYIGKAGLHGSQVVIEAQGLEALIAATPDEGEENLDSYAGMSAILFDVQLRPVTFFNGYSDLMSKMLSASGDPISVVKGLILLIDHSQELQLQSGLKANIEVQGGLAIDISGAMEFSLWYRESKTRVKNRVTVVITTDITVDSSFVKAGLETSTETEAGLEFISTVQFSQYPFLVCMQM 830
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Human
Match: MTTP (microsomal triglyceride transfer protein [Source:HGNC Symbol;Acc:HGNC:7467])

HSP 1 Score: 62.3882 bits (150), Expect = 3.917e-9
Identity = 54/255 (21.18%), Postives = 108/255 (42.35%), Query Frame = 2 
Query: 1976 LGIIKD-------SNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
            L I++D       ++ +V     + + H +  +S    S  Y   +  +  S      +I+ S  GI++ S  ++F        +   +     GL     A+  E  E ++    +S  LF  +LRP   F G ++LMS + +A     S+++G  + ID   E+  Q+G+   +   G + +D S  M  +LWY+ ++T +K      +  +  + S    +        + G++F + + F   P   C+ +
Sbjct:  576 LAIVQDILRFEMPASKIVRRVLKEMVAHNYDRFSRSGSSSAYTGYIERSPRSASTYSLDILYSGSGILRRSNLNIFQYIGKAGLHGSQVVIEAQGLEALIAATPDEGEENLDSYAGMSAILFDVQLRPVTFFNGYSDLMSKMLSASGDPISVVKGLILLIDHSQELQLQSGLKANIEVQGGLAIDISGAMEFSLWYRESKTRVKNRVTVVITTDITVDSSFVKAGLETSTETEAGLEFISTVQFSQYPFLVCMQM 830
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Celegans
Match: dsc-4 (Defecation Suppressor of Clk-1; Microsomal triglyceride transfer protein [Source:UniProtKB/TrEMBL;Acc:G5ECG7])

HSP 1 Score: 50.8322 bits (120), Expect = 5.873e-6
Identity = 31/125 (24.80%), Postives = 60/125 (48.00%), Query Frame = 2 
Query: 2159 KHSMTDLFLVSTANENNVFSLSTHMSGLGTF--AGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLW 2527
            K S+ +L +     E+N+FSLS     L  F    AS  +   +G +++ + G +L  + +F+G+T+L+S +W A         G     D +  +   +G+ + V+ VG++ +        +LW
Sbjct:  652 KRSIFELSMKKGRKEHNLFSLSIDTEHLEQFVTGSASSRSGAPQGSVRIGVAGHKLPTHHIFKGSTDLLSTVWEADGRTHKAFEGHVPVRDVRLSVPLLSGLTLDVDSVGAISMRVLASAEVSLW 776
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Fly
Match: Mtp (gene:FBgn0266369 transcript:FBtr0081439)

HSP 1 Score: 62.7734 bits (151), Expect = 1.412e-9
Identity = 58/259 (22.39%), Postives = 114/259 (44.02%), Query Frame = 2 
Query: 2150 GIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS---------------ENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKS-ILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAET-LLKTTGNAF---VIINSKLKSINQSSDRINE--LSIKTGIDFETNINFGVTPVQNCLSILVPESTM---NVKSTITLNANSTLLD--RSNQFLKLPGKCYSITQKMNQVC 2845
            GI+K    +  L +  ++ + F L  + +GLG+  G                   +E V   +++S+ G +LRP + F G T LM  +W    S  +   + + +  D+++ II  +G  +    +G+  +D + ++  +LW + A+T + + TG+A    + +      + Q     +E  LS+   +DF + I         C+ +  PE  +   NV+S    + +       RS    K  G  +++ QK N++C
Sbjct:  628 GILKRGSVEFLLHAGRSQASSFKLGIYTAGLGSLVGDGDSGDGNDAIPADDEFSEDEAVTAGMEISVQGAQLRPLVFFSGQTELMGHVWGGSASDSTPAYQATTLSQDNEHYIILTSGATLHWRVLGARSVDLNGKVGFSLWNRNAQTEIQQNTGSAVLGHLAVGFTYAKLVQDFSITHEPKLSLNADLDFYSGIKL-------CMQLQRPEQLLKQTNVRSVFLQSVDRPYAKHVRSTLSHKTAGCTFALNQKNNEMC 879
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Zebrafish
Match: mttp (microsomal triglyceride transfer protein [Source:NCBI gene;Acc:406207])

HSP 1 Score: 63.1586 bits (152), Expect = 1.367e-9
Identity = 57/280 (20.36%), Postives = 124/280 (44.29%), Query Frame = 2 
Query: 2030 LQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTIT----LNANSTLLDRSNQFLKLPGKCYSITQKMNQVC 2845
            + H +  +S+   S  Y   +  T +     + +I+ S  G+++ S  +++  S     +   ++    GL +   A+  E  EE+E    +S  LF  +LRP   F+G ++LMS +++      ++++G  +  D    I  Q+G+     +   + +D S  M  +LWY+ ++T +   G   +I N  + +   S+        +  +DF T + F   P   C+ +   ++T   + T++    L        + ++   +PG  + + Q+ + +C
Sbjct:  599 ISHNYDRFSKTGSSSAYSGFMAETVDVTCTYNLDILYSGSGVLRRSNMNIYGQSNNALLHGLQVTIEAQGLESLIAATPDEGEEELESFAGMSALLFDVQLRPVTFFKGYSDLMSKMFSMSGDPINVVKGLILLTDHSQVIPLQSGLRASAEFQAGLSIDISGGMEFSLWYRESKTSVNNRGALVIIGNMTVDTDFVSAGVEVGFETEATLDFITTVQFSEYPFLVCMQM--DKTTFPFRETVSKQEKLPTGQMFSRKRSRDQVVPGSEFPLHQENSNMC 876
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Zebrafish
Match: mttp (microsomal triglyceride transfer protein [Source:NCBI gene;Acc:406207])

HSP 1 Score: 53.9138 bits (128), Expect = 1.308e-7
Identity = 39/187 (20.86%), Postives = 85/187 (45.45%), Query Frame = 2 
Query: 2303 LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTIT----LNANSTLLDRSNQFLKLPGKCYSITQKMNQVCSE 2851
            LF  +LRP   F+G ++LMS +++      ++++G  +  D    I  Q+G+     +   + +D S  M  +LWY+ ++T +   G   +I N  + +   S+        +  +DF T + F   P   C+ +   ++T   + T++    L        + ++   +PG  + + Q+ + +C +
Sbjct:    5 LFDVQLRPVTFFKGYSDLMSKMFSMSGDPINVVKGLILLTDHSQVIPLQSGLRASAEFQAGLSIDISGGMEFSLWYRESKTSVNNRGALVIIGNMTVDTDFVSAGVEVGFETEATLDFITTVQFSEYPFLVCMQM--DKTTFPFRETVSKQEKLPTGQMFSRKRSRDQVVPGSEFPLHQENSNMCKK 189
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Xenopus
Match: ENSXETT00000030277.1 (microsomal triglyceride transfer protein, gene 2 [Source:NCBI gene;Acc:100127803])

HSP 1 Score: 86.2705 bits (212), Expect = 1.694e-16
Identity = 74/369 (20.05%), Postives = 171/369 (46.34%), Query Frame = 2 
Query: 1625 VHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLG--IIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTF------AGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
            ++L A+KN++L     +LL+  E++G    R    A  +F    ++      +K  +  +       +D+  +  +   L++ +     L++I+ G+   N+     L++K++    +   + K    L+ +K      + +   S+   S  +  PL AT++       +++ +E G++K S++D+ L    N      +S    GL +           E+ +   G+  + LF  +LRP + FQG  +L+S ++++     S+++G  + ID    +  Q+G+  +V Y G + L+ S  ++ ++W + ++T + T  +      +++ +    +D   ++  +T +DF++ + F   P+  CL +
Sbjct:  464 IYLLALKNAQLPETIPLLLQYAEENGGAVSRKALAALQSFPTEMISTKE---VKSTLRKIFHQTYQEYDKASRLIAAEILLVTEHSQMDLINIILGLEDINTEASKLLLSKIQRGQQIKNRLRKTEKTLLTNKHL----YNYSKLSQSGRSTFFSGPLTATKDVSSTYGLDLLFTESGLLKQSISDITLFGHNNHLKAMQVSIEAEGLESLFGDGTDDDDDEHKDATVGMSAM-LFDVQLRPVVFFQGYMDLVSKVFSSSGDPISVVKGDVLLIDYLQRLPMQSGLQAIVEYQGGLGLEVSANIDVSIWEQESKTNINTKASLVFEFTTEVDTSFFQTDIKAQVDAETAVDFDSIMKFSSFPMLMCLEL 824
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Xenopus
Match: slc39a2 (solute carrier family 39 (zinc transporter), member 2 [Source:Xenbase;Acc:XB-GENE-965557])

HSP 1 Score: 78.5666 bits (192), Expect = 3.774e-14
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 2 
Query: 2126 FNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTF--AGASENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
             +I+ S  GI++ S  D+FL S   E +   +     G+ +   A A E  E++E    +S  LF  +LRP   FQG ++LM+ +++A     S+++G  +  D    I  Q+G+     + G + +D S  M+ +LWY+ ++T +   G   +  N  + S   ++     L  ++  DF T + F   P   C+ +
Sbjct:  605 LDILYSGSGILRRSNMDIFLYSKNTELHAIQVVIEAQGIESLIAATADEGEEDLESFAGMSAILFDVQLRPVTFFQGYSDLMAKMFSATGDPISVVKGLVLLTDHSETIQLQSGLKANAEFQGGLSIDISGGMDFSLWYRESKTSVNNRGAVVITGNITVDSGFVNAGMETRLESESSFDFVTTVKFSSYPFLVCMQM 802
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Xenopus
Match: slc39a2 (solute carrier family 39 (zinc transporter), member 2 [Source:Xenbase;Acc:XB-GENE-965557])

HSP 1 Score: 78.5666 bits (192), Expect = 3.836e-14
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 2 
Query: 2126 FNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTF--AGASENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
             +I+ S  GI++ S  D+FL S   E +   +     G+ +   A A E  E++E    +S  LF  +LRP   FQG ++LM+ +++A     S+++G  +  D    I  Q+G+     + G + +D S  M+ +LWY+ ++T +   G   +  N  + S   ++     L  ++  DF T + F   P   C+ +
Sbjct:  671 LDILYSGSGILRRSNMDIFLYSKNTELHAIQVVIEAQGIESLIAATADEGEEDLESFAGMSAILFDVQLRPVTFFQGYSDLMAKMFSATGDPISVVKGLVLLTDHSETIQLQSGLKANAEFQGGLSIDISGGMDFSLWYRESKTSVNNRGAVVITGNITVDSGFVNAGMETRLESESSFDFVTTVKFSSYPFLVCMQM 868
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Xenopus
Match: slc39a2 (solute carrier family 39 (zinc transporter), member 2 [Source:Xenbase;Acc:XB-GENE-965557])

HSP 1 Score: 78.5666 bits (192), Expect = 3.838e-14
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 2 
Query: 2126 FNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTF--AGASENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
             +I+ S  GI++ S  D+FL S   E +   +     G+ +   A A E  E++E    +S  LF  +LRP   FQG ++LM+ +++A     S+++G  +  D    I  Q+G+     + G + +D S  M+ +LWY+ ++T +   G   +  N  + S   ++     L  ++  DF T + F   P   C+ +
Sbjct:  617 LDILYSGSGILRRSNMDIFLYSKNTELHAIQVVIEAQGIESLIAATADEGEEDLESFAGMSAILFDVQLRPVTFFQGYSDLMAKMFSATGDPISVVKGLVLLTDHSETIQLQSGLKANAEFQGGLSIDISGGMDFSLWYRESKTSVNNRGAVVITGNITVDSGFVNAGMETRLESESSFDFVTTVKFSSYPFLVCMQM 814
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Xenopus
Match: slc39a2 (solute carrier family 39 (zinc transporter), member 2 [Source:Xenbase;Acc:XB-GENE-965557])

HSP 1 Score: 78.5666 bits (192), Expect = 4.018e-14
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 2 
Query: 2126 FNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTF--AGASENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
             +I+ S  GI++ S  D+FL S   E +   +     G+ +   A A E  E++E    +S  LF  +LRP   FQG ++LM+ +++A     S+++G  +  D    I  Q+G+     + G + +D S  M+ +LWY+ ++T +   G   +  N  + S   ++     L  ++  DF T + F   P   C+ +
Sbjct:  622 LDILYSGSGILRRSNMDIFLYSKNTELHAIQVVIEAQGIESLIAATADEGEEDLESFAGMSAILFDVQLRPVTFFQGYSDLMAKMFSATGDPISVVKGLVLLTDHSETIQLQSGLKANAEFQGGLSIDISGGMDFSLWYRESKTSVNNRGAVVITGNITVDSGFVNAGMETRLESESSFDFVTTVKFSSYPFLVCMQM 819
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Mouse
Match: Mttp (microsomal triglyceride transfer protein [Source:MGI Symbol;Acc:MGI:106926])

HSP 1 Score: 62.3882 bits (150), Expect = 2.555e-9
Identity = 55/239 (23.01%), Postives = 109/239 (45.61%), Query Frame = 2 
Query: 2036 HMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGL-GTFAGASENNEE-VEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQS---SDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMN 2731
            H +  +S+   S  Y   +  +  +      +I+ S  GI++ S  ++F      E +   +     GL G  A   +  EE ++    +S  LF  +LRP   F G ++LMS + +A     S+++G  + ID   +I  Q+G+   +   G + +D S  M  +LWY+ ++T +K      V+I S + +++ S   +   +    + G++F + + F   P   C+ +   E+ + 
Sbjct:  602 HNYDRFSKSGSSSAYTGYVERSPRAASTYSLDILYSGSGILRRSNLNIFQYIGKAELHGSQVVIEAQGLEGLIAATPDEGEENLDSYAGMSAILFDVQLRPVTFFNGYSDLMSKMLSASGDPVSVVKGLILLIDHSQDIQLQSGLKANMEIQGGLAIDISGSMEFSLWYRESKTRVKN--RVAVVITSDV-TVDASFVKAGVESRAETEAGLEFISTVQFSQYPFLVCMQMDKAEAPLR 837
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Mouse
Match: Mttp (microsomal triglyceride transfer protein [Source:MGI Symbol;Acc:MGI:106926])

HSP 1 Score: 62.3882 bits (150), Expect = 2.947e-9
Identity = 55/239 (23.01%), Postives = 109/239 (45.61%), Query Frame = 2 
Query: 2036 HMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGL-GTFAGASENNEE-VEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQS---SDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMN 2731
            H +  +S+   S  Y   +  +  +      +I+ S  GI++ S  ++F      E +   +     GL G  A   +  EE ++    +S  LF  +LRP   F G ++LMS + +A     S+++G  + ID   +I  Q+G+   +   G + +D S  M  +LWY+ ++T +K      V+I S + +++ S   +   +    + G++F + + F   P   C+ +   E+ + 
Sbjct:  617 HNYDRFSKSGSSSAYTGYVERSPRAASTYSLDILYSGSGILRRSNLNIFQYIGKAELHGSQVVIEAQGLEGLIAATPDEGEENLDSYAGMSAILFDVQLRPVTFFNGYSDLMSKMLSASGDPVSVVKGLILLIDHSQDIQLQSGLKANMEIQGGLAIDISGSMEFSLWYRESKTRVKN--RVAVVITSDV-TVDASFVKAGVESRAETEAGLEFISTVQFSQYPFLVCMQMDKAEAPLR 852
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. UniProt/SwissProt
Match: sp|Q865F1|MTP_PIG (Microsomal triglyceride transfer protein large subunit OS=Sus scrofa OX=9823 GN=MTTP PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.339e-10
Identity = 67/307 (21.82%), Postives = 137/307 (44.63%), Query Frame = 2 
Query: 1976 LGIIKD-------SNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRIN-ELSIKT--GIDFETNINFGVTPVQNCLSI---LVPESTMNVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVC 2845
            L I++D       ++ +V     + + H +  +S+   S  Y   +    +S      +I+ S  GI++ S  ++F        +   +     GL     A+  E  E ++    LS  LF  +LRP   F G ++LMS + +A +   S+++G  + ID   E+  Q+G+   +   G + +D S  M  +LWY+ ++T +K   N   ++ +   +++ S  +   E+S +T  G++F + + F   P   CL +    +P      K    L+     + R  + + + G  + + Q+ +++C
Sbjct:  576 LSIVQDILRFEMPASKMVRRVLKEMVAHNYDRFSKSGSSSAYTGYIERGPHSASTYSLDILYSGSGILRRSNLNIFQYVGKTPLHAIQVVIEAQGLEALIAATPDEGEENLDSYAGLSPLLFDVQLRPVTFFNGYSDLMSKMLSASSDPISVVKGLILLIDHSQELQLQSGLKANMEVQGGLAIDISGSMEFSLWYRESKTRVK---NRVTVVITGDITVDSSFVKAGLEISAETEAGLEFISTVQFSQYPFLVCLQMDRDGIPYRQFETKYE-RLSTGRGYVSRKRKEILVAGSEFPLHQENSEMC 878
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. UniProt/SwissProt
Match: sp|A0A0N6WHT4|MTP_MEGAM (Microsomal triglyceride transfer protein OS=Megalobrama amblycephala OX=75352 GN=MTTP PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.235e-10
Identity = 61/289 (21.11%), Postives = 129/289 (44.64%), Query Frame = 2 
Query: 2003 LVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTF--AGASENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTIT----LNANSTLLDRSNQFLKLPGKCYSITQKMNQVC 2845
            LV+      + H +  +S+   S  +   +  T + +   + +I+ S  G+++ S  +++  S     +   ++    GL +   A A E  EE+E    +S  LF  +LRP   F+G ++LMS +++      ++++G  +  D    I  Q+G+     + G + +D S  M  +LWY+ ++T +   G   VI N  +     S+        +  +DF T + F   P   C+ +   ++T   +  ++    L +  T   + ++   +PG  + + Q+ + +C
Sbjct:  592 LVQQVMKDMISHNYDRFSKTGSSSAFSGFMAQTADVISTYNLDILYSGSGVLRRSNMNIYGQSNNALLHGLQVTIEAQGLESLIAATADEGEEELESFAGMSALLFDVQLRPVTFFKGYSDLMSKMFSMSGDPINVVKGLILLTDHSQVIPLQSGLRASAEFQGGLAIDISGGMEFSLWYRESKTSVNNRGALVVIGNVTVDMDFVSAGVEVGFETEASLDFITTVQFSEYPFLVCMQM--DKTTFPFREMVSKQEKLPSGQTFSTKRSRDQLVPGSEFPLHQENSNMC 878
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. UniProt/SwissProt
Match: sp|P55156|MTP_BOVIN (Microsomal triglyceride transfer protein large subunit (Fragment) OS=Bos taurus OX=9913 GN=MTTP PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.924e-10
Identity = 56/231 (24.24%), Postives = 108/231 (46.75%), Query Frame = 2 
Query: 2036 HMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRIN-ELSIKT--GIDFETNINFGVTPVQNCLSI 2707
            H +  +S+   S  Y   +  T +S      +I+ S  GI++ S  ++F        +   +     GL     A+  E  E ++    LS  LF  +LRP   F G ++LMS + +A +   S+++G  + ID   E+  Q+G+   ++  G + +D +  M  +LWY+ ++T +K      V+I   + +++ S  +   E+  +T  G++F + + F   P   CL +
Sbjct:  596 HNYDRFSKSGSSSAYTGYVERTSHSASTYSLDILYSGSGILRRSNLNIFQYIEKTPLHGIQVVIEAQGLEALIAATPDEGEENLDSYAGLSALLFDVQLRPVTFFNGYSDLMSKMLSASSDPMSVVKGLLLLIDHSQELQLQSGLKANMDVQGGLAIDITGAMEFSLWYRESKTRVKN--RVSVLITGGI-TVDSSFVKAGLEIGAETEAGLEFISTVQFSQYPFLVCLQM 823
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. UniProt/SwissProt
Match: sp|A0A0R4IVV0|MTP_DANRE (Microsomal triglyceride transfer protein large subunit OS=Danio rerio OX=7955 GN=mttp PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.032e-8
Identity = 57/280 (20.36%), Postives = 124/280 (44.29%), Query Frame = 2 
Query: 2030 LQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTIT----LNANSTLLDRSNQFLKLPGKCYSITQKMNQVC 2845
            + H +  +S+   S  Y   +  T +     + +I+ S  G+++ S  +++  S     +   ++    GL +   A+  E  EE+E    +S  LF  +LRP   F+G ++LMS +++      ++++G  +  D    I  Q+G+     +   + +D S  M  +LWY+ ++T +   G   +I N  + +   S+        +  +DF T + F   P   C+ +   ++T   + T++    L        + ++   +PG  + + Q+ + +C
Sbjct:  599 ISHNYDRFSKTGSSSAYSGFMAETVDVTCTYNLDILYSGSGVLRRSNMNIYGQSNNALLHGLQVTIEAQGLESLIAATPDEGEEELESFAGMSALLFDVQLRPVTFFKGYSDLMSKMFSMSGDPINVVKGLILLTDHSQVIPLQSGLRASAEFQAGLSIDISGGMEFSLWYRESKTSVNNRGALVIIGNMTVDTDFVSAGVEVGFETEATLDFITTVQFSEYPFLVCMQM--DKTTFPFRETVSKQEKLPTGQMFSRKRSRDQVVPGSEFPLHQENSNMC 876
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. UniProt/SwissProt
Match: sp|O08601|MTP_MOUSE (Microsomal triglyceride transfer protein large subunit OS=Mus musculus OX=10090 GN=Mttp PE=1 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 1.787e-8
Identity = 55/239 (23.01%), Postives = 109/239 (45.61%), Query Frame = 2 
Query: 2036 HMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGL-GTFAGASENNEE-VEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQS---SDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMN 2731
            H +  +S+   S  Y   +  +  +      +I+ S  GI++ S  ++F      E +   +     GL G  A   +  EE ++    +S  LF  +LRP   F G ++LMS + +A     S+++G  + ID   +I  Q+G+   +   G + +D S  M  +LWY+ ++T +K      V+I S + +++ S   +   +    + G++F + + F   P   C+ +   E+ + 
Sbjct:  602 HNYDRFSKSGSSSAYTGYVERSPRAASTYSLDILYSGSGILRRSNLNIFQYIGKAELHGSQVVIEAQGLEGLIAATPDEGEENLDSYAGMSAILFDVQLRPVTFFNGYSDLMSKMLSASGDPVSVVKGLILLIDHSQDIQLQSGLKANMEIQGGLAIDISGSMEFSLWYRESKTRVKN--RVAVVITSDV-TVDASFVKAGVESRAETEAGLEFISTVQFSQYPFLVCMQMDKAEAPLR 837
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. TrEMBL
Match: A0A2L2Y3M5 (Microsomal triglyceride transfer protein large subunit OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.053e-26
Identity = 184/813 (22.63%), Postives = 357/813 (43.91%), Query Frame = 2 
Query:  554 LNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHC-NTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDY--------KSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLMESKHKISPAQIT-----IKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVK--NLWKTVKTLTGYLYDQGIQTVTSLLE------NSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVA--NAFNTFWV--LKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGM-NLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTY----SEQHGSKVYIKPLFATENSLMDIHFNIIGS--EGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGI-----LQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKS-ILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTG----NAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTM---NVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVCSEF 2854
            L++  S  S ++R+ G V KI    +    + NL +GI +L+   E+R+ + E D+SG C V YE +N N  RK KS+C ++ F  S T+        Y    ++  +  + D  L+  KS        V +   I +          + + +T    +K  ++ S++N+ +VI  I  +    +        + +   N+     D +K   E   + + A++       KL+  FR  T+  ++  L   KF K  +  I D +     +   + T    + +   DE+   R L+ +  I  PK ++++   ++   K     +    I T+ ++L+      +  NN  LE  R     ++++ +  C  + C +  L  ++N+       +LL+  +K G  +   V    + N      LK +ES + L+   +F  + NK    D+  +  +   L  L+  T  L  IL+ + + ++  F  FL AK+ + +      D +   +S+ F+ L   ++++    S++  S ++ KPL  + +  M+I + I     EG ++K S+ ++        +N+ ++     GL + AG     EE EG      ++L+L G  LRPYI F GT+ LM   W+   S  +  L+G F   D +  I+  NG+   +   G +  D S  +  +LW + +++ +           V ++S L S+  +     + S ++ ++F T++ F  +P Q CL +  P+  +   N +S     +  TL     +   +P K Y++ ++ N+ C + 
Sbjct:   97 LDKITSKPSFILREKGSVNKIWDDSAETLVLRNLKRGIASLL---EIRKKEKEVDVSGSCDVLYE-VNKNNIRKRKSNCFHSKFDKSLTQP-------YGVRSMSTQHLLSTDCLLLDDKSNTLSKCSAVEYVKTISNVWRKPSLCVNARSQLTLDGTSKETTVYSNQNIENVIEEIKKSVSSNLVEDVIEALLPHQEQNSKNNLADNVKKYQEGLKQANLAKLKSALAFYKLLPSFRSATKDDIIKILQNKKF-KPIQGQILDLIAASSNEDSVKATFEYYKDVTDYDEML-ERFLISLSIIPRPKEYVMEEIKIFLESKKRDEKIRATLITTLGAVLKTYGMRYDIANNQVLEDYR----TYLEKNLGECKDQSCIITALRGLRNAGFVRSIPLLLDYAQKGGKPALEAVLTIRSINDPEQIHLKSSESEKRLLN--VFLQVGNKQ---DRSTRSIAAEILFDLKPKTEVLKGILSALSDQSDPEFATFLAAKIFKKA------DEDNEFKSRIFKLLPEKYISFYYSTSQKGSSSLFKKPLINSGD--MNISYGIQMEMLEGNLLKRSVFNVNF-EAPEVSNLLTVGMFGEGLASLAGG----EEEEGATLHAGMELTLLGSSLRPYIFFTGTSELMGHAWSGTASTPTPALQGIFSFSDDERLIVLHNGMATQMQLRGVLSTDLSASVQISLWSQNSQSQVANAAALLMRGSVTVDSGLSSLQGAF----QFSGQSIVNFNTDLVFSSSPFQMCLQMDHPDIALKYDNHRSLSISGSKYTLKQTKRRKRNIPSKSYALHERNNEQCRQL 870
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. TrEMBL
Match: A0A336MXD3 (CSON009269 protein OS=Culicoides sonorensis OX=179676 GN=CSON009269 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.638e-24
Identity = 169/778 (21.72%), Postives = 332/778 (42.67%), Query Frame = 2 
Query:  542 TGRFLNETNSITSIVVRKV-------GLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDS-FSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPE-FVNYMPTNNSVEFLDQIKSLMESKHKISPAQIT--IKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGY--LYDQGIQTVTSLLENSPNNVNLE---PVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVA-NAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQ--YFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSE---------QHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGI-----LQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEII-FQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAET-LLKTTGNAFVIINSKLKSINQSSDRINEL-SIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANST 2767
            TG F   ++SI   V  K        GLV      E+    + NL K IV+     +    + E D+SG C V Y   + N F K K HC    +      ++D+   +      N  Y    DG +  I+  E H +    +  +     S       +      ++   ++ + ++++   N +E  LIS  E         N V+ + + K  +++    +PA     I L+ + R    +   H ++  K  KE +  + D L    +   ++  ++ L+   ++D  +A R L  +     P   +++ L K  +  + Y  L D  +QT+ S+       +  +       E+ NF+ + +  C  + C +++L A+ N +  N    L   F + G+Y     A  A   F V   N +      E IF  I+ K   +D   +  ++  L+ L+++ +++  ++N +  N+  F+   +L+ KL+  +           V+S +++    + + Y +         Q G    I   F+   S      ++   + G++K    D+++ +   + ++F+L    +GL +F G S++++  E       ++L L G  +RP + F G   LM  +W+   S  +    +   +    EII  QNG  + ++ +G+V +D + Q++ +LW + AET + + TG A  I +  + S  Q+  ++ EL   +  ++ +++I+F  T V  CL +  P +T+    T +LN   T
Sbjct:   88 TGEFDERSSSILGNVSPKPFYAVMNDGLVSSSYFEETEDESITNLKKAIVSFFQFKQKDGTEKETDVSGVCDVSYIVWDTNKFSKTKLHCRLGLL--PQHQRLDTPLGITVVPFSNTEYLKGLDGTIKRIEGQECHLVRVNAYPRVGTIVNSTFNFELNEAIGKSELLQCDSIEECVKLM--KNVKESDLISKVEKSCQDGKCYNLVQEVKRFKDDLKNTEIGNPASAKGFISLVQVGRSAKAE-TWHRILNSKTGKEIRPQLLDILAAVQSYDAFKEAIAALQLDDEDDFNDAERYLQGLSVGTRPDTKVIEALIKIAQNNSYYTKLEDTLMQTIASMTHRHARLLGDDYQNGFVSEVTNFLTDALDACESDECKLMYLRALGNLKAPNTISKLF-TFAQQGSYKISTQAVKALKQFPVSFWNTAEFRSKFEDIFYQITKK---YDSSARTLALDILLDLKLNIHEMTRLVNYLLSNDKAFEIKQYLLQKLQLNA-----------VQSDYYEHAMKLLVKYDKKINNYHVLGQKGMSTAIMRDFSRTPSFNGSLLSVQEIKDGVLKRGNADIYVRTGDEKFSIFTLGLFGNGLSSFMGGSDDSDPDEDTTVTAGMELYLQGTAMRPLVFFSGQGELMGHVWSGTASEPTPAYQAISTLQDHEEIIRLQNGAHLEISALGAVSIDLNGQISISLWNRNAETKVAQNTGFATSIKSEVISSYIQT--KVEELIEERPCLNLDSSIDFSGT-VALCLQLHQPSTTLKSTVTKSLNVPGT 842
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. TrEMBL
Match: A0A336LXJ6 (CSON003735 protein OS=Culicoides sonorensis OX=179676 GN=CSON003735 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.278e-23
Identity = 163/750 (21.73%), Postives = 322/750 (42.93%), Query Frame = 2 
Query:  599 GLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDS-FSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPE-FVNYMPTNNSVEFLDQIKSLMESKHKISPAQIT--IKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGY--LYDQGIQTVTSLLENSPNNVNLE---PVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVA-NAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQ--YFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSE---------QHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGI-----LQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEII-FQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAET-LLKTTGNAFVIINSKLKSINQSSDRINEL-SIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNAN 2761
            GLV      E+    + NL K IV+     +    + E D+SG C V Y   + N F K K HC    +      ++D+   +      N  Y    DG +  I   E H +    +  +     S       +      ++   ++ + ++++   N +E  LIS  E         N V+ + + K  +++    +PA     I L+ + R    +   H ++  K  KE +  + D L    +   ++  ++ L+   ++D  +A R L  +     P   +++ L K  +  + Y  L D  +QT+ S+       +  +       E+ NF+ + +  C  + C +++L A+ N +  N    L   F + G+Y     A  A   F V   N +      E IF  I+ K   +D   +  ++  L+ L+++ +++  ++N +  N+  F+   +L+ KL+  +           V+S +++    + + Y +         Q G    I   F+   S      ++   + G++K    D+++ +   + ++F+L    +GL +F G S+  +  E       ++L L G  +RP + F G   LM  +W+   S  +    +   +    EII  QNG  + ++ +G+V +D + Q++ +LW + AET + + TG A  I +  + S  Q+  ++ EL   +  ++ +++I+F  T V  CL +  P +T+  KST+T + N
Sbjct:  114 GLVSSSYFEETEDESITNLKKAIVSFFQFKQKDGTEKETDVSGVCDVSYIVWDTNKFSKTKLHCRLGLL--PQHQRLDTPLGVTVVPFSNTEYLKGLDGTIKRIDGQERHLVRVNAYPRVGTIVNSTFNFELNEAIGKSELLQCDSIEECVKLM--KNVKESDLISKVEKSCQDGKCYNLVQEVKRFKDDLKNTEIGNPASAKAFISLVQVGRSAKAE-TWHRILNSKTGKEIRPQLLDILAAVQSYDAFKEAIAALQLDDEDDFNDAERYLQGLSVGTRPDTKVIEELIKIAQNNSYYTKLEDTLMQTIASMTHRHARLLGDDYQNGFVSEVTNFLTDALDACESDECKLMYLRALGNLKAPNTISKLF-TFAQQGSYKISTQAVKALKQFPVSFWNTAEFRSKFEDIFYQITKK---YDSSARTLALDILLDLKLNIHEMTRLVNYLLSNDKAFEIKQYLLQKLQLNA-----------VQSDYYEHAMKLLVKYDKKINNYHVLGQKGMSTAIMRDFSRTPSFNGSLLSVQEIKDGVLKRGNADIYVRTGDEKFSIFTLGLFGNGLSSFMGGSDETDPDEDTTVTAGMELYLQGTAMRPLVFFSGQGELMGHVWSGTASEPTPAYQAISTLQDHEEIIRLQNGAHLEISALGAVSIDLNGQISISLWNRNAETKVAQNTGFATSIKSEVISSYIQT--KVEELIEERPCLNLDSSIDFSGT-VALCLQLHQPNTTL--KSTVTKSLN 838
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. TrEMBL
Match: K1PY02 (Microsomal triglyceride transfer protein large subunit OS=Crassostrea gigas OX=29159 GN=CGI_10008268 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.524e-22
Identity = 149/728 (20.47%), Postives = 310/728 (42.58%), Query Frame = 2 
Query:  599 GLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIF---GNNYQEVFLISTPEFVNYMP-TNNSVEFLDQIKSLMESKH--KISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGYLYDQGIQTVTSLLENSPNNVNLEPVR--------EEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNE--NLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQY--FLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAG-ASENNEEVEGILQLSLFGKE--LRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTG----------IDFETNINFGVTPV 2689
            G++ ++   E       N+ KG+++L  + E    + E D++GEC   Y      I  K K +C    +    EN    F +  ++    +Y    DG + S      HS+       L     +   + +       + IS+ N+ + + +I+      Y+E+ L S PE           V  L  +K  + S+   KI   +  +KL+  FR  + K  + +++  K      + + D      T   +E  +  +    +       R +L       P  +++K + + +K     + ++ ++   +L   +  N   +P           E +N+++ ++  C  E C ++++ ++ N+ L  F   LL   +   + S  +   A      +K+++  +  N + + IF    NK N+ D  V+  ++  L+   I T  L +I+     + + F+   +LM ++K+LS       S+L V       + + +  ++++  S  +   L  T ++          ++ G++K S   + +++      + +   +  G+    G A+E  E  E    LSL   +  LRP   F+G + LM+A+WNAP+   S L+G+ +  D  ++I   NG+ +  + +G   +D S +++ +LWYK + +++  +G A V+         + S +I+   +K+G          IDF+T+++F   P+
Sbjct:  109 GVIGRVYTSEVESIFCANVKKGLLSLFQLQETEGQRDEIDVAGECSAYYAVYGGRI-TKTKQNCQNVEIAGEYENVNKMFGVSPDNSFVTHYD-TADGIIKSATGSSRHSIVINARPQLSAAVAAIQRLHYVSDAAGAAAISANNIKEALDLIYKGEAKKYREMLLPSGPEVQECTENCEKPVSILQNVKEDLTSEKLSKIVSGKAYLKLLRAFRN-SGKASIEEVLTHKDSYNIVKQLIDVAAATQTPAAHEALMQLITFTDESAIDYPERFILASAYTTHPGEYLLKGMLELMKK---KVPNESLRESIALGMGAVVNSFCKPYGNCLEYSTIAEYVNYVETEMKSCEEEECKLLYVRSMGNAGLAKFLPSLLN--QALNSKSSTVSLTAIQGLRRMKISDFKDQVNQVLKSIFH--QNKRNY-DSSVRIAALEILLQNGISTGGLRNIVLSAMYDQTEFEVSTYLMKRMKDLSESDPKFRSSLAV--VLSDPMVNNYNLFAQKGKSSAFTGYLAETSSANCTYGLYQENTKSGVMKKSAMVVNVLNKQATQPLLTFGIYADGIEALVGDAAEGEESTEATAGLSLTMMDVLLRPVEFFRGMSGLMTAVWNAPSEPVSALQGNLLLQDYSHKIHLSNGLIVDASVLGVASIDLSGKISISLWYKNSHSVITNSG-ALVV---------EGSLQIDSEELKSGVRFSTESEAFIDFQTDVDFAEMPI 813
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. TrEMBL
Match: U5ET75 (Putative microsomal triglyceride transfer protein (Fragment) OS=Corethrella appendiculata OX=1370023 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.234e-21
Identity = 175/816 (21.45%), Postives = 359/816 (44.00%), Query Frame = 2 
Query:  599 GLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTS---------FVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYK-------SETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMP--TNNSVEFLDQIKSLM--ESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVKNLWKTV--KTLTGYLYDQGIQTVTSLLE----NSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVA-NAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQY--FLMAKL---------------------KELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASEN---NEEV--EGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPI-DSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKS--INQSSDRI----NELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANSTLLDRSNQFLK-----LPGKCYSITQKMNQVC 2845
            G +++I +       + NL K +++L     +  N +E+D+SG C V Y + +   + K KS+C +          +VL +T   I S S       N  Y+   DG    +  ++ H  E V F  LI  Y        S TT+    +  ++   +   + +VI+   G N + V L ++ +         NN ++F+  +++ +  ES  K   A   +KL+ + R    +  +  + K +  K+ K  + D L    T   ++   + ++   ++D   A R L  +     P   I+++L+K +  K     LYD  IQT+ S+ +    N PN+   E V++ M+ F+  ++  C  +HC ++++ A++N +     E L+    K G+Y+  + A  A  +F V   ++  ++   E IF     ++  +D   +  ++  L+ +++    L  ++  +  N+  ++   +L+ KL                     K+L+N  +I    L         L   + TY   +GS + ++ L                   G++K  +  L + S+  + N+F+L     GL +F G S+    NE++  +  L+L++ G  LRP   F G   LM  +W+   S  +    +   + D++  +  QNG  + ++ +G++ +D + Q+N +LW K A + ++      +I N ++++  I   ++ +     +L +K+ IDF +++         CL +  P + ++ + T T    +T   +  +F++     + G  +++ +K N +C
Sbjct:   96 GTIKEIFLNTKENLSVKNLKKSLISLFQYQLLDGNYVENDVSGTCDVSYISKSSTKYIKVKSNCRSKDINQYERKEYVLGTT---IKSLS-------NSEYSLTADG---DVSKIDNH--EHVEF--LINSYSKIGGFIDSLTTLKSDGVLTNVQTFTGDTIENVIKQELG-NLRRVSLETSVQAKQCFSDDCNNLIKFVKDVRTSLSNESVGKKESAIAWLKLVPVGRSAKAEDFIR-IFKSQTMKDYKLQLLDLLGAIQTFESHKAVKTIIDFKSEDDFYNAERYLQALAVGGKPHESIIEDLFKLLEEKFDNDKLYDTLIQTIASITQHYANNHPNSFKAELVKKIML-FLLRKLDECKEDHCLVMYIRALQNLKSPATAESLIAKALK-GSYTVSVAAMRALRSFPVHLWDKHFKHCF-EDIFL---QRLRKYDSSARALALDILLDMKLSYEDLAGLMEFLKSNDKVYEMKQYLLQKLRMYSEKCEEFKQNFTTILQNDKQLNNYHVIGARGLSTA------LSRKYSTYPSFNGSLISLQEL-----------------SNGVLKRGIVGLTMESSGEKFNLFTLGMFCGGLSSFVGGSDEIDPNEDITTQAGLELTVQGSFLRPIQFFSGQGELMGHVWSGTASEPTPAYQAITLLQDTKKVVKLQNGFAVYLSAIGAMSIDLNGQINFSLWNKNANSKIEQNSGLALIGNIQMENSFIKVGTEFVLTQEPQLHLKSDIDFYSDVLL-------CLQLTQPNTILSNRQTFTTAIPNT--KKKYEFVRNISRHISGLTHALNKKNNDMC 854
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Cavefish
Match: ENSAMXT00000038519.1 (microsomal triglyceride transfer protein large subunit-like [Source:NCBI gene;Acc:103026313])

HSP 1 Score: 74.3294 bits (181), Expect = 5.059e-13
Identity = 89/400 (22.25%), Postives = 171/400 (42.75%), Query Frame = 2 
Query: 1562 EEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKEL--SN-------LGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVE-----GILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVII---NSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSIL 2710
            E+ +  I + +     E     HL A+K++ +     +LL+  ++S   S  IV +A        + E     +K+ +  +       F   V+  +   L+M       + ++L  +         FL AK+  L  SN       L ++KDS L   + +F    H+         S  Y   +   ++++    F  + S+ G +K S +     S     +   +S  + G+ +   ASE  EE E       +     G +++P   FQG T+LMS  + AP    +IL G+ + I+ +  +I Q+G+   V + G + +D S  ++ +L+ + +++   T  N F I+    ++ ++   S+    +  + + I F T +NF   PVQ CL ++
Sbjct:  447 EDALTLILKGLGSSKDEAEIKSHLLALKSALIPEIVPVLLQYIDQSKPVSI-IVLSALQDLPTQYITEE----VKQHVRDIFKQNKKSFSAAVRVAAAQILLMHDPLYTDVKEVLLRIAKEKPEISKFLTAKVTSLLQSNHPARDVILTVLKDSKL---NNYF----HL----GRVGCSSSYAGLMAEAKDTVTSYEFEFLFSDTGALKQSNSHFSTQSRGGSLHSLQVSLELGGIDSLL-ASEPIEEAEQEDLMAGMSAMFLGVQIQPITFFQGYTDLMSKYFTAPDGPMNILSGNILLINQKQSVILQSGLQTQVFFHGGLSVDVSADLDFSLFTQESKS---TVNNGFSIVVSARAEAEAPFMSTTVKTKTEMNSSISFVTTVNFSTIPVQYCLQLI 826
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Cavefish
Match: ENSAMXT00000012809.2 (microsomal triglyceride transfer protein large subunit-like [Source:NCBI gene;Acc:103026313])

HSP 1 Score: 73.559 bits (179), Expect = 7.775e-13
Identity = 89/400 (22.25%), Postives = 171/400 (42.75%), Query Frame = 2 
Query: 1562 EEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKEL--SN-------LGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVE-----GILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVII---NSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSIL 2710
            E+ +  I + +     E     HL A+K++ +     +LL+  ++S   S  IV +A        + E     +K+ +  +       F   V+  +   L+M       + ++L  +         FL AK+  L  SN       L ++KDS L   + +F    H+         S  Y   +   ++++    F  + S+ G +K S +     S     +   +S  + G+ +   ASE  EE E       +     G +++P   FQG T+LMS  + AP    +IL G+ + I+ +  +I Q+G+   V + G + +D S  ++ +L+ + +++   T  N F I+    ++ ++   S+    +  + + I F T +NF   PVQ CL ++
Sbjct:  498 EDALTLILKGLGSSKDEAEIKSHLLALKSALIPEIVPVLLQYIDQSKPVSI-IVLSALQDLPTQYITEE----VKQHVRDIFKQNKKSFSAAVRVAAAQILLMHDPLYTDVKEVLLRIAKEKPEISKFLTAKVTSLLQSNHPARDVILTVLKDSKL---NNYF----HL----GRVGCSSSYAGLMAEAKDTVTSYEFEFLFSDTGALKQSNSHFSTQSRGGSLHSLQVSLELGGIDSLL-ASEPIEEAEQEDLMAGMSAMFLGVQIQPITFFQGYTDLMSKYFTAPDGPMNILSGNILLINQKQSVILQSGLQTQVFFHGGLSVDVSADLDFSLFTQESKS---TVNNGFSIVVSARAEAEAPFMSTTVKTKTEMNSSISFVTTVNFSTIPVQYCLQLI 877
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Cavefish
Match: mttp (microsomal triglyceride transfer protein [Source:NCBI gene;Acc:103028418])

HSP 1 Score: 70.0922 bits (170), Expect = 8.933e-12
Identity = 78/388 (20.10%), Postives = 164/388 (42.27%), Query Frame = 2 
Query: 1580 IKEQISG----CHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLI----KEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSI 2707
            +K+Q+ G       E    ++L A+KNS L     IL    E            A+ T  +  L   +  LI    K+ +  V       +++ V+  +   ++       ++ ++L  +   N     ++++K++++  L     ++ L++      + H +  +S+   S  Y   +    +       +I+ S  GI++ S+ ++F  S         ++    GL +   A+  E  E++E    +S  L   +LRP   F+G ++LMS +++      S+++G  +  D    I  Q+G+   V + G + +D S  M  +LWY+ ++T +   G+  V+ N  + +   S        ++  +DF T + F   P   C+ +
Sbjct:  453 VKQQLLGGLDDTKDEAEVQMYLLALKNSLLPEAIPILTRFAESE--------TGAYCTIAISALQRYDPPLITREVKQTLNRVYHQNRRVYEKNVRAAAADAILSSNPSYMEVKNLLLSIGHQNHEMNKYMLSKVQDI--LRFEMPASKLMQQAMKDMITHNYDRFSKMGSSSAYSGFMTQGADVTTTYSLDILYSGSGILRRSIMNIFGQSYGALLQGLQVAIEAQGLESLIAATPDEGEEDLESFAGMSALLLDVQLRPVTFFKGYSDLMSKMFSMSGDPISVVKGLILLTDHSQVIPLQSGLRAAVEFQGGLGIDISGGMEFSLWYRESKTSVNNRGSLVVVGNVTVDADFLSVGMEVSFDMEAALDFITTVQFSNYPFLVCMQM 830
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Cavefish
Match: ENSAMXT00000038008.1 (microsomal triglyceride transfer protein large subunit-like [Source:NCBI gene;Acc:103026313])

HSP 1 Score: 48.521 bits (114), Expect = 4.431e-6
Identity = 29/101 (28.71%), Postives = 54/101 (53.47%), Query Frame = 2 
Query: 2258 ASENNEEVE-----GILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAET 2545
            ASE  EE E       +     G +++P   FQG T+LMS  + AP    +IL G+ + I+ +  +I Q+G+   V + G + +D S  ++ +L+ + +++
Sbjct:   29 ASEPIEEAEQEDLMAGMSAMFLGVQIQPITFFQGYTDLMSKYFTAPDGPMNILSGNILLINQKQSVILQSGLQTQVFFHGGLSVDVSADLDFSLFTQESKS 129
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Sea Lamprey
Match: mttp (microsomal triglyceride transfer protein [Source:NCBI gene;Acc:406207])

HSP 1 Score: 71.633 bits (174), Expect = 6.398e-13
Identity = 45/177 (25.42%), Postives = 90/177 (50.85%), Query Frame = 2 
Query: 2036 HMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLK 2554
            H +  +++   S  Y   +  T++       NI+ S  G+++ S  ++FL S   + +   +S    GL     A+  E  EE++ +  ++  LF  +LRP   F+G  +LM+ +W A     S ++G  + ID   ++  Q+G+   V + GS+ +D S  M+ +LW + ++T+++
Sbjct:  603 HNYDRFAKTGSSSAYSGFMSETKDMTSTYSLNILYSNSGMLRKSNMNMFLFSHEAQLHSVQVSLEAQGLEGLIAATPDEGEEELDSMAGMAPILFDVQLRPITFFRGYGDLMAKMWEATGEPTSAVKGIILLIDHSQDLSLQSGLRADVEFQGSLAIDISGSMDVSLWNRESKTIVR 779
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Medaka
Match: mttp (microsomal triglyceride transfer protein [Source:NCBI gene;Acc:101169409])

HSP 1 Score: 59.3066 bits (142), Expect = 1.850e-8
Identity = 55/251 (21.91%), Postives = 118/251 (47.01%), Query Frame = 2 
Query: 2126 FNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGAS--ENNEEVEGILQLS--LFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRIN-ELSIKT--GIDFETNINFGVTPVQNCLSILVPESTMNVKSTIT----LNANSTLLDRSNQFLKLPGKCYSITQKMNQVC 2845
             +I+ S  GI++ S  +++  S     +   ++    GL +   A+  E  E++E    +S  LF  +LRP   F+G ++LM+ +++      ++++G  +  D    +  Q+G+     + G + +D S  M  +LWY+ ++T +   G   V  N    +++    R   E+S +T   +DF T + F   P   C+ +   ++T  V+  +T    +++  +   R  + L + G  + + Q+ + +C
Sbjct:  633 LDILYSGSGILRRSNMNIYGASKDAMLHGLQVAIEAQGLESLIAATPDEGEEDLESFAGMSALLFDVQLRPVTFFKGYSDLMAKMFSMTGDPMNVVKGLILLTDHSEVLQLQSGLKANAEFQGGLAIDISGGMEISLWYRESKTSVNNRGALVVTGNV---TVDMDFLRAGMEVSFETEASLDFITTVQFSEYPFLVCMQM--DKATFPVREYLTKYEHVSSGKSSQLRKQRRLIVSGSEFPLHQENSNMC 878
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Planmine SMEST
Match: SMESG000053503.1 (SMESG000053503.1)

HSP 1 Score: 1671.75 bits (4328), Expect = 0.000e+0
Identity = 853/853 (100.00%), Postives = 853/853 (100.00%), Query Frame = 2 
Query:  296 MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDYVSVISYVGKIETSAYXXXXXXXXXXXKFNVYGTGRFLNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLMESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGYLYDQGIQTVTSLLENSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVCSEF 2854
            MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDYVSVISYVGKIETSAYLLTDKQELLLLKFNVYGTGRFLNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLMESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTLSELEKLFKEDELEAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGYLYDQGIQTVTSLLENSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVCSEF
Sbjct:    1 MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDYVSVISYVGKIETSAYLLTDKQELLLLKFNVYGTGRFLNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLMESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTLSELEKLFKEDELEAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGYLYDQGIQTVTSLLENSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVCSEF 853
[Close]
BLAST of Microsomal triglyceride transfer protein large subunit vs. Planmine SMEST
Match: SMESG000045597.1 (SMESG000045597.1)

HSP 1 Score: 1661.35 bits (4301), Expect = 0.000e+0
Identity = 847/853 (99.30%), Postives = 851/853 (99.77%), Query Frame = 2 
Query:  296 MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDYVSVISYVGKIETSAYXXXXXXXXXXXKFNVYGTGRFLNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLMESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTXXXXXXXXXXXXXXAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGYLYDQGIQTVTSLLENSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVCSEF 2854
            MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDYVSVISYVGKIETSAYLLTDKQELLLLKFNVYGTGRFLNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSL ESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTLSELEKLFKEDELEAHRILLLIQNIRAPKPFIVKNLWKTV+TLTGYLYDQGIQTVTSLLENSPNNVNLEPVREEMINFIKEQIS CHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFT+ISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLL+TTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANST+LDRSNQFLKLPGKCYSITQKMNQVCSEF
Sbjct:    1 MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDYVSVISYVGKIETSAYLLTDKQELLLLKFNVYGTGRFLNETNSITSIVVRKVGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKYETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGALISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDVIRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLTESKHKISPAQITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVTLSELEKLFKEDELEAHRILLLIQNIRAPKPFIVKNLWKTVQTLTGYLYDQGIQTVTSLLENSPNNVNLEPVREEMINFIKEQISDCHIEHCFMVHLNAIKNSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKIFTLISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYFLMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLFATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLGTFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKSILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAETLLRTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQNCLSILVPESTMNVKSTITLNANSTILDRSNQFLKLPGKCYSITQKMNQVCSEF 853
The following BLAST results are available for this feature:
BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
MTTP3.457e-921.18microsomal triglyceride transfer protein [Source:H... [more]
MTTP3.917e-921.18microsomal triglyceride transfer protein [Source:H... [more]
MTTP3.917e-921.18microsomal triglyceride transfer protein [Source:H... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
dsc-45.873e-624.80Defecation Suppressor of Clk-1; Microsomal triglyc... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Mtp1.412e-922.39gene:FBgn0266369 transcript:FBtr0081439[more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mttp1.367e-920.36microsomal triglyceride transfer protein [Source:N... [more]
mttp1.308e-720.86microsomal triglyceride transfer protein [Source:N... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSXETT00000030277.11.694e-1620.05microsomal triglyceride transfer protein, gene 2 [... [more]
slc39a23.774e-1426.26solute carrier family 39 (zinc transporter), membe... [more]
slc39a23.836e-1426.26solute carrier family 39 (zinc transporter), membe... [more]
slc39a23.838e-1426.26solute carrier family 39 (zinc transporter), membe... [more]
slc39a24.018e-1426.26solute carrier family 39 (zinc transporter), membe... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Mttp2.555e-923.01microsomal triglyceride transfer protein [Source:M... [more]
Mttp2.947e-923.01microsomal triglyceride transfer protein [Source:M... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q865F1|MTP_PIG2.339e-1021.82Microsomal triglyceride transfer protein large sub... [more]
sp|A0A0N6WHT4|MTP_MEGAM5.235e-1021.11Microsomal triglyceride transfer protein OS=Megalo... [more]
sp|P55156|MTP_BOVIN9.924e-1024.24Microsomal triglyceride transfer protein large sub... [more]
sp|A0A0R4IVV0|MTP_DANRE1.032e-820.36Microsomal triglyceride transfer protein large sub... [more]
sp|O08601|MTP_MOUSE1.787e-823.01Microsomal triglyceride transfer protein large sub... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2L2Y3M54.053e-2622.63Microsomal triglyceride transfer protein large sub... [more]
A0A336MXD35.638e-2421.72CSON009269 protein OS=Culicoides sonorensis OX=179... [more]
A0A336LXJ65.278e-2321.73CSON003735 protein OS=Culicoides sonorensis OX=179... [more]
K1PY024.524e-2220.47Microsomal triglyceride transfer protein large sub... [more]
U5ET754.234e-2121.45Putative microsomal triglyceride transfer protein ... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ENSAMXT00000038519.15.059e-1322.25microsomal triglyceride transfer protein large sub... [more]
ENSAMXT00000012809.27.775e-1322.25microsomal triglyceride transfer protein large sub... [more]
mttp8.933e-1220.10microsomal triglyceride transfer protein [Source:N... [more]
ENSAMXT00000038008.14.431e-628.71microsomal triglyceride transfer protein large sub... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mttp6.398e-1325.42microsomal triglyceride transfer protein [Source:N... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mttp1.850e-821.91microsomal triglyceride transfer protein [Source:N... [more]
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BLAST of Microsomal triglyceride transfer protein large subunit vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000053503.10.000e+0100.00SMESG000053503.1[more]
SMESG000045597.10.000e+099.30SMESG000045597.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30015218 ID=SMED30015218|Name=Microsomal triglyceride transfer protein large subunit|organism=Schmidtea mediterranea sexual|type=transcript|length=2917bp
TTTTGAATAAAGTTCATCGAATGAAAATAAACCGTTGATATGTCAATTGG
AATGATTACGTTGGTATTATGCTTTATCTGTGATAATTTTTCTTTATCAA
TTTTATTTGTAAATAGCCTTAAAGATTTTGATTTTTTTCGAGTATAATTT
TGAACCTTGATTAGAGATTAGATATGACTAATTTGGTGTTGCATTTAAAA
TTGTGCATGTGTGCCCGAATACACACTATATATCATTAGGCATCAAAAGT
GATTAATTCCATTTGCTGATTCCACAAATTTCTTTTTCAAAATAAATGCC
TCGCATGAATTTTGGAATTATAATTGTGTTATTTTTGTCAGTGGAAATTT
ATAATTTTCAGGACGTAAACAAAGATGACATCAGCTTCAATTATGAATTC
GATTATCAGACAAATGTGGAAACAAAAAATTCTTCTGGAGATTATGTTTC
TGTAATATCTTATGTTGGAAAAATCGAAACTTCTGCATACCTTTTAACGG
ACAAACAAGAACTATTGTTGTTGAAATTCAATGTTTATGGAACAGGAAGA
TTTTTAAATGAAACTAATTCTATTACTAGTATTGTAGTCAGAAAAGTTGG
ATTAGTTGAAAAAATAATTGTGGGAGAATCAGTTCCTACAGGAATGTTAA
ATTTGTTGAAGGGAATTGTAAATTTGATGAATGTAGATGAAATGAGAGAA
AATAAAATTGAACATGATATCAGTGGAGAATGTTTTGTAAAGTATGAAAC
TATAAATGATAATATATTTCGAAAAGAAAAATCACATTGCAACACTTCTT
TTGTTTTATCATCAACAGAAAACAAAATTGATAGTTTTTCATTGTACAAA
GAAAGTGAAATTAATATTTATTATGCATACAACAATGACGGAGCTTTAAT
TTCCATTAAAAGTGTTGAAACCCATTCTTTAGAACCAGTTTTATTTCACA
ATTTAATTCAAGACTACAAATCCGAGACAACTATAACTTTCAAAAAATTA
ACAAAATCCTTATCAATGATCAGTTCAAAAAATTTAAATGATGTTATTCG
AATAATATTTGGAAACAATTATCAAGAAGTGTTTCTCATTTCAACTCCAG
AATTTGTTAATTATATGCCGACTAACAACAGCGTGGAATTTTTAGATCAA
ATAAAATCACTAATGGAATCTAAACATAAAATATCTCCAGCACAAATCAC
GATAAAGTTGATATTGATTTTTCGTCAAATTACTGAAAAACTTGTTTTGC
ACGACTTAATGAAAATGAAATTTCCTAAAGAACGAAAAGAAAGCATAACA
GATGCTTTGGTAAATTGTGGAACAAAATTATGTTATGAAGTAACATTAAG
TGAGCTTGAGAAACTTTTTAAAGAAGATGAATTAGAAGCTCATAGAATTT
TGTTATTGATTCAAAATATTAGAGCGCCAAAACCTTTTATCGTTAAAAAT
CTCTGGAAAACCGTAAAAACCTTAACTGGTTACTTATATGATCAAGGAAT
TCAAACTGTAACAAGCTTATTGGAAAATTCTCCCAACAATGTTAATCTCG
AGCCTGTTAGGGAAGAAATGATAAATTTCATTAAAGAACAAATATCCGGT
TGTCATATTGAACATTGCTTTATGGTCCATTTGAATGCTATCAAAAATAG
CAGACTTGAAAATTTTCATGAGATTTTATTGGAAATTTTTGAAAAGAGTG
GAAATTATTCTCCAAGAATAGTTGCAAACGCTTTTAATACTTTTTGGGTG
TTAAAGTTAAATGAAAGTAATGAAAATTTGATTAAAGAGAAAATATTTAC
AGTGATTTCTAATAAAATTAACTTTTTTGATCAATATGTTCAATATCATT
CGATATACTGTTTAATAATGCTACAAATTGATACATATAAATTGGTAGAT
ATCCTTAATGGAATGAACCTGAACAATAGCCATTTTCAATATTTCTTAAT
GGCAAAGCTGAAAGAACTGAGCAATCTTGGGATTATAAAGGATTCAAATT
TACTGGTGGAAAGTAAATTTTTTCAAAAATTACAACATATGTTTTTAACG
TATTCCGAGCAACACGGTTCGAAAGTATATATCAAACCGTTATTTGCCAC
AGAAAATTCATTAATGGACATACATTTCAATATTATTGGATCAGAGGGAG
GAATAATAAAGCACAGTATGACTGATTTATTTCTCGTATCAACTGCAAAC
GAAAACAACGTATTTTCATTATCAACTCACATGAGTGGTTTAGGCACATT
TGCTGGAGCAAGTGAAAATAATGAAGAAGTCGAAGGAATATTACAATTAT
CACTTTTTGGGAAAGAATTAAGGCCATATATATTATTTCAAGGGACAACA
AATTTAATGTCAGCTATCTGGAATGCTCCAACTAGTTTGAAATCAATACT
CCGAGGATCTTTTGTGCCAATCGATTCACAGAATGAAATAATTTTTCAGA
ATGGAATTTTTATGATGGTAAATTACGTTGGATCTGTGCATTTGGATTTC
TCATTTCAAATGAACTCTAATTTATGGTACAAAACCGCCGAAACGTTGCT
AAAAACAACGGGAAATGCATTTGTGATAATCAATTCAAAATTGAAATCAA
TTAATCAATCTTCTGACAGAATCAATGAATTATCCATTAAAACTGGAATT
GATTTTGAAACTAATATTAATTTTGGAGTAACTCCCGTGCAAAATTGTCT
GTCAATATTGGTGCCGGAATCGACAATGAATGTTAAATCAACCATAACGT
TAAATGCCAATTCAACTCTCCTTGATCGTTCCAACCAATTTTTGAAATTA
CCAGGAAAATGCTATTCTATCACTCAGAAGATGAATCAAGTTTGCTCTGA
ATTTTAATTTCAAAGTTAACTTGAAGTTTTAATGTTCTATTTTTAGTAAA
AAAAGCGAAGATCGGAA
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protein sequence of SMED30015218-orf-1

>SMED30015218-orf-1 ID=SMED30015218-orf-1|Name=SMED30015218-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=854bp
MPRMNFGIIIVLFLSVEIYNFQDVNKDDISFNYEFDYQTNVETKNSSGDY
VSVISYVGKIETSAYLLTDKQELLLLKFNVYGTGRFLNETNSITSIVVRK
VGLVEKIIVGESVPTGMLNLLKGIVNLMNVDEMRENKIEHDISGECFVKY
ETINDNIFRKEKSHCNTSFVLSSTENKIDSFSLYKESEINIYYAYNNDGA
LISIKSVETHSLEPVLFHNLIQDYKSETTITFKKLTKSLSMISSKNLNDV
IRIIFGNNYQEVFLISTPEFVNYMPTNNSVEFLDQIKSLMESKHKISPAQ
ITIKLILIFRQITEKLVLHDLMKMKFPKERKESITDALVNCGTKLCYEVT
LSELEKLFKEDELEAHRILLLIQNIRAPKPFIVKNLWKTVKTLTGYLYDQ
GIQTVTSLLENSPNNVNLEPVREEMINFIKEQISGCHIEHCFMVHLNAIK
NSRLENFHEILLEIFEKSGNYSPRIVANAFNTFWVLKLNESNENLIKEKI
FTVISNKINFFDQYVQYHSIYCLIMLQIDTYKLVDILNGMNLNNSHFQYF
LMAKLKELSNLGIIKDSNLLVESKFFQKLQHMFLTYSEQHGSKVYIKPLF
ATENSLMDIHFNIIGSEGGIIKHSMTDLFLVSTANENNVFSLSTHMSGLG
TFAGASENNEEVEGILQLSLFGKELRPYILFQGTTNLMSAIWNAPTSLKS
ILRGSFVPIDSQNEIIFQNGIFMMVNYVGSVHLDFSFQMNSNLWYKTAET
LLKTTGNAFVIINSKLKSINQSSDRINELSIKTGIDFETNINFGVTPVQN
CLSILVPESTMNVKSTITLNANSTLLDRSNQFLKLPGKCYSITQKMNQVC
SEF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0005548phospholipid transporter activity
GO:0005319lipid transporter activity
Vocabulary: biological process
TermDefinition
GO:0015914phospholipid transport
GO:0006869lipid transport
GO:0006950response to stress
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000101muscle cell
PLANA:0002056medial muscle cell
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR039988MTTP
IPR015816Vitellinogen_b-sht_N
IPR011030Lipovitellin_superhlx_dom
IPR001747Lipid_transpt_N
IPR015819Lipid_transp_b-sht_shell
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001747Lipid transport protein, N-terminalPFAMPF01347Vitellogenin_Ncoord: 102..506
e-value: 4.5E-8
score: 32.0
IPR001747Lipid transport protein, N-terminalPROSITEPS51211VITELLOGENINcoord: 25..625
score: 8.33
IPR039988Microsomal triglyceride transfer protein large subunitPANTHERPTHR13024MICROSOMAL TRIGLYCERIDE TRANSFER PROTEIN, LARGE SUBUNITcoord: 33..852
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.608
IPR011030Lipovitellin-phosvitin complex, superhelical domainSUPERFAMILYSSF48431Lipovitellin-phosvitin complex, superhelical domaincoord: 281..555
IPR015819Lipid transport protein, beta-sheet shellSUPERFAMILYSSF56968Lipovitellin-phosvitin complex; beta-sheet shell regionscoord: 102..255