DNA_pol_B_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30015036 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Match: ZC53.4 (pep chromosome:WBcel235:X:1925750:1937689:1 gene:WBGene00022511.1 transcript:ZC53.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZC53.4) HSP 1 Score: 77.411 bits (189), Expect = 1.329e-14 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 3 LESLSYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQK 452 L+ L GC EVDLE E+ + D P+ E +K + ++KL T + ++ YVIH+ L L LG+K+ ++R + FK+S +YI+ NT R + N +K++YKL+ V +R++ L E K+ ASKP F++ Sbjct: 1255 LKKLDRGCIFEVDLEYPKEIHSRHNDSPLCPENVKIDNHVIKKLCNTLFDREKYVIHYENLLQCLQLGLKLKKIHRIITFKESNWLASYIEMNTNPRKNAKNDFEKDFYKLMNNSVFGKTMENVRERVDVRLVTDEDKIKKLASKPNFKR 1404
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A4Y2PKA1 (Uncharacterized protein OS=Araneus ventricosus OX=182803 GN=AVEN_114505_1 PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.697e-26 Identity = 65/143 (45.45%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 21 GCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQ 449 G LEVDLE EL D D P+A EK P+GSK EKLL T Y K NYV+H+++LK YL +G+K+ V+R + F+QS K YID NTE+R K+TN +K++YKL+ V KR++ C + K+ Y +KP F+ Sbjct: 396 GYILEVDLEYPKELHDYHTDLPLAPEKKIPDGSKQEKLLTTLYDKTNYVVHYKILKQYLEMGLKLKKVHRILEFEQSDWLKKYIDLNTEMRKKATNEFEKDFYKLMNNSVFGKAIENVRKRIDIKFCTSYKQAKRYIAKPNFK 538 HSP 2 Score: 37.7354 bits (86), Expect = 1.697e-26 Identity = 14/31 (45.16%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 473 LNSDSISLDRPSYIGQSVFDLSKLRICELQY 565 +N I LD+P Y+G S+ DLSK +C+ Y Sbjct: 552 MNKTEIKLDKPIYVGMSILDLSKHLMCDFHY 582
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: K7JBR6 (Uncharacterized protein OS=Nasonia vitripennis OX=7425 PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.324e-22 Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 15 SYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKN 323 S+G EVDL+ SEL + D P E KP GSK EKLL T +PK+NYVIH+ LK LS G+++ ++R ++FKQSP K+YID N+ LRA + N +KN Sbjct: 300 SHGYIFEVDLDYPSELHNAHNDLPFCPEHAKPPGSKQEKLLATLHPKRNYVIHYVALKQALSNGLQLRKIHRVLKFKQSPWLKSYIDLNSSLRALAKNEFEKN 402 HSP 2 Score: 33.8834 bits (76), Expect = 1.324e-22 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 473 LNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEK 580 +N I +D+P Y+G +V DLSK + + Y ++K Sbjct: 461 MNKTDICIDKPIYVGLTVLDLSKTHMYDFHYNYMQK 496 HSP 3 Score: 22.3274 bits (46), Expect = 1.324e-22 Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 340 NNRLYGKTVENLKK 381 NN ++GKT+EN++K Sbjct: 408 NNAVFGKTMENVRK 421
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: K7JCV3 (Uncharacterized protein OS=Nasonia vitripennis OX=7425 PE=4 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.081e-22 Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 15 SYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKN 323 S+G LEVDL+ SEL + D P E KP GSK EKLL +PK+NYVIH+ LK LS G+++ ++R ++FKQSP K+YID N+ LRA + N +KN Sbjct: 87 SHGYILEVDLDYPSELHNAHNDLPFCPEYAKPPGSKQEKLLAALHPKRNYVIHYVALKQALSNGLQLRKIHRVLKFKQSPWLKSYIDLNSSLRALAKNEFEKN 189 HSP 2 Score: 33.8834 bits (76), Expect = 3.081e-22 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 473 LNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEK 580 +N I +D+P Y+G +V DLSK + + Y ++K Sbjct: 248 MNKTDICIDKPIYVGLTVLDLSKTHMYDFHYNYMQK 283 HSP 3 Score: 22.3274 bits (46), Expect = 3.081e-22 Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 340 NNRLYGKTVENLKK 381 NN ++GKT+EN++K Sbjct: 195 NNAVFGKTMENVRK 208
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: A0A3S4Q410 (Uncharacterized protein (Fragment) OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_01333 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.147e-22 Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 15 SYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQ 449 +YG L VDLE EL D D P+A EK+ P G+K EKLL ++ Y IH+++LKLY+ LG+KVT + + ++FKQS K+YID NT LRAK+TN +K+++KL+ V R N E +++ SK ++ Sbjct: 116 NYGFILMVDLEYPEELHDYHNDLPLAPEKILPPGNKTEKLLCHFGKRERYTIHYKILKLYMKLGIKVTRLYKILQFKQSAFMKSYIDMNTALRAKATNDFEKDFFKLMNNSVFGKTMENIRNRQNIFFESNENRILNRVSKFNYK 260 HSP 2 Score: 30.8018 bits (68), Expect = 8.147e-22 Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 485 SISLDRPSYIGQSVFDLSKLRICELQYR 568 I D+P Y+G SV DLSK+ + + Y+ Sbjct: 278 EIVFDKPIYVGFSVLDLSKILMYKFHYK 305
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Match: K7J8D7 (Uncharacterized protein OS=Nasonia vitripennis OX=7425 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.035e-21 Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 3 Query: 15 SYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKN 323 S+G LEVDL+ SEL + D P E KP GSK EKLL +PK+NYVIH+ LK LS G+++ ++R ++FKQSP K+Y D N+ LRA + N +KN Sbjct: 698 SHGYILEVDLDYPSELHNAHNDLPFCPEHAKPPGSKQEKLLAALHPKRNYVIHYVALKQALSNGLQLRKIHRVLKFKQSPWLKSYTDLNSSLRALAKNEFEKN 800 HSP 2 Score: 33.8834 bits (76), Expect = 1.035e-21 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 473 LNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEK 580 +N I +D+P Y+G +V DLSK + + Y ++K Sbjct: 859 MNKTDICIDKPIYVGLTVLDLSKTHMYDFHYNYMQK 894 HSP 3 Score: 22.3274 bits (46), Expect = 1.035e-21 Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 340 NNRLYGKTVENLKK 381 NN ++GKT+EN++K Sbjct: 806 NNAVFGKTMENVRK 819
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO46109 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR56]) HSP 1 Score: 85.8853 bits (211), Expect = 5.403e-18 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 24 CTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQ 449 C +EVD+ L D D+P+A E +K +KV KL+ K YV+H LKLY SLG+KVT V+R + F++S K YID NT LRAK+TN +K+++KL+ V R++ L EK+ SKP ++ Sbjct: 1258 CVVEVDMAYPRHLHDSHDDYPLAPESIKI--NKVGKLIPNLNDKTKYVVHHETLKLYESLGLKVTKVHRGITFEESGWLKTYIDLNTSLRAKATNDFEKDFFKLMNNSVFGKTMENIRNRVDIRLITNEKQARKLISKPNYK 1397 HSP 2 Score: 23.0978 bits (48), Expect = 5.403e-18 Identity = 8/24 (33.33%), Postives = 14/24 (58.33%), Query Frame = 2 Query: 494 LDRPSYIGQSVFDLSKLRICELQY 565 ++P Y+G + DLSK + + Y Sbjct: 1418 FNKPVYLGMCILDLSKNLMYDFHY 1441
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000029316.1 (SMESG000029316.1) HSP 1 Score: 284.263 bits (726), Expect = 1.318e-94 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 2 Query: 1055 MFQSFIFIHSTEKYQTCKIFKPSEKPNYEIVVTNQLIDQWICRYMGRVTNGKFIDRIGHYNIKARIAFHSASIVSFSILRNYIPIAKCIRLSTKKLKNAEFGSCDMETIKVIKPSDRITIQANEVDRSYAIITDEKYSQL 1474 MFQSFIFIHSTEKYQTCKIFKPSEK NYEIVVTNQLIDQWICRYMGRVTNGKFIDRIGHYNIKARIAFHSASIVSFSILRNYIPIAKCIRLSTKKLK+AEFGSCDMETIKVIKPSDRITIQANEVDRSYAIITDEKYSQL Sbjct: 1 MFQSFIFIHSTEKYQTCKIFKPSEKLNYEIVVTNQLIDQWICRYMGRVTNGKFIDRIGHYNIKARIAFHSASIVSFSILRNYIPIAKCIRLSTKKLKHAEFGSCDMETIKVIKPSDRITIQANEVDRSYAIITDEKYSQL 140
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000076702.1 (SMESG000076702.1) HSP 1 Score: 219.55 bits (558), Expect = 4.555e-74 Identity = 119/154 (77.27%), Postives = 127/154 (82.47%), Query Frame = 3 Query: 3 LESLSYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQKISKV 464 LESLSYG TLEV+LEI S+L DKL DFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGV+VTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNYY K +N +L EKK+ITYASKPTFQ+ K+ Sbjct: 837 LESLSYGYTLEVNLEIPSDLHDKLDDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVEVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNYY----------------KLLNNSL--YEKKMITYASKPTFQRSIKI 972 HSP 2 Score: 78.5666 bits (192), Expect = 4.555e-74 Identity = 42/62 (67.74%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 464 ADLLNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEKYRTKFNC*LK*VIKFT-SFYLPI 646 A LLN DS+ LDRPSYIGQSV DLSKLR+ ELQY+DLEKYR +FNC + V T SF+L I Sbjct: 978 AALLNPDSVCLDRPSYIGQSVLDLSKLRMYELQYKDLEKYRRQFNCEINIVAGDTDSFFLEI 1039
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000072420.1 (SMESG000072420.1) HSP 1 Score: 215.698 bits (548), Expect = 4.189e-73 Identity = 118/154 (76.62%), Postives = 126/154 (81.82%), Query Frame = 3 Query: 3 LESLSYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQKISKV 464 LESLSYG TLEVDLEI SEL KL DFPIAAEKMKPEGSKVEKLLLTHYPK NYVIHWRLLKLY+SLGVKVTHVNR VRFKQS IFK YID NTELRAKSTNTLDKNYYKLL + +KRMN LC +KK++TY SKPTF+K K+ Sbjct: 2544 LESLSYGYTLEVDLEIPSELHVKLDDFPIAAEKMKPEGSKVEKLLLTHYPKYNYVIHWRLLKLYMSLGVKVTHVNRGVRFKQSNIFKKYIDINTELRAKSTNTLDKNYYKLLNNSLYGKTVENLKKRMNLRLCTTDKKLVTYTSKPTFKKSIKI 2697 HSP 2 Score: 79.337 bits (194), Expect = 4.189e-73 Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 464 ADLLNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEKYRTKFNC*LK*VIKFT-SFYLPI 646 A LLN DSI LDRPSYIGQSV DLSKLR+ ELQY+DLEKYR +FNC + V T SF+L I Sbjct: 2703 AALLNPDSICLDRPSYIGQSVLDLSKLRMYELQYKDLEKYRQQFNCEINIVAGDTDSFFLEI 2764
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000069427.1 (SMESG000069427.1) HSP 1 Score: 216.083 bits (549), Expect = 4.707e-73 Identity = 118/154 (76.62%), Postives = 126/154 (81.82%), Query Frame = 3 Query: 3 LESLSYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQKISKV 464 LESLSYG TLEVDLEI SEL KL DFPIAAEKMKPEGSKVEKLLLTHYPK NYVIHWRLLKLY+SLGVKVTHVNR VRFKQS IFK YID NTELRAKSTNTLDKNYYKLL + +KRMN LC +KK++TY SKPTF+K K+ Sbjct: 2263 LESLSYGYTLEVDLEIPSELHVKLDDFPIAAEKMKPEGSKVEKLLLTHYPKYNYVIHWRLLKLYMSLGVKVTHVNRGVRFKQSNIFKKYIDINTELRAKSTNTLDKNYYKLLNNSLYGKTVENLKKRMNLRLCTTDKKLVTYTSKPTFKKSIKI 2416 HSP 2 Score: 78.9518 bits (193), Expect = 4.707e-73 Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 464 ADLLNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEKYRTKFNC*LK*VIKFT-SFYLPI 646 A LLN DSI LDRPSYIGQSV DLSKLR+ ELQY+DLEKYR +FNC + V T SF+L I Sbjct: 2422 AVLLNPDSICLDRPSYIGQSVLDLSKLRMYELQYKDLEKYRQQFNCEINIVAGDTDSFFLEI 2483
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000006691.1 (SMESG000006691.1) HSP 1 Score: 215.312 bits (547), Expect = 1.428e-71 Identity = 117/154 (75.97%), Postives = 125/154 (81.17%), Query Frame = 3 Query: 3 LESLSYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPKKNYVIHWRLLKLYLSLGVKVTHVNRAVRFKQSPIFKNYIDTNTELRAKSTNTLDKNXXXXXXXXVIR*NR*KPEKRMNKTLCKAEKKVITYASKPTFQKISKV 464 LESLSYG TLEVDLEI SEL KL DFPIAAEKMKPEGSKVEKLLLTHYPK NYVIHWRLLKLY+SLGVKVTHVNR VRFKQS IFK YID NTE RAKSTNTLDKNYYKLL + +KRMN LC +KK++TY SKPTF+K K+ Sbjct: 1417 LESLSYGYTLEVDLEIPSELHVKLDDFPIAAEKMKPEGSKVEKLLLTHYPKYNYVIHWRLLKLYMSLGVKVTHVNRGVRFKQSNIFKKYIDINTEFRAKSTNTLDKNYYKLLINSLYGKTVENLKKRMNLRLCTTDKKLVTYTSKPTFKKSIKI 1570 HSP 2 Score: 74.7146 bits (182), Expect = 1.428e-71 Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 464 ADLLNSDSISLDRPSYIGQSVFDLSKLRICELQYRDLEKYRTKFNC*LK*VIKFT-SFYLPI 646 A LLN DSI LDRPSYIGQSV DLSKLR+ ELQY+DLEKYR +FNC + V T SF+L I Sbjct: 1576 AVLLNPDSICLDRPSYIGQSVLDLSKLRMYELQYKDLEKYR-QFNCEINIVAGDTDSFFLEI 1636 The following BLAST results are available for this feature:
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of DNA_pol_B_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of DNA_pol_B_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30015036 ID=SMED30015036|Name=DNA_pol_B_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1543bpback to top protein sequence of SMED30015036-orf-1 >SMED30015036-orf-1 ID=SMED30015036-orf-1|Name=SMED30015036-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=114bp LESLSYGCTLEVDLEISSELDDKLGDFPIAAEKMKPEGSKVEKLLLTHYPback to top protein sequence of SMED30015036-orf-2 >SMED30015036-orf-2 ID=SMED30015036-orf-2|Name=SMED30015036-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=155bp MSYLLILLMFQSFIFIHSTEKYQTCKIFKPSEKPNYEIVVTNQLIDQWICback to top Annotated Terms
The following terms have been associated with this transcript:
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