ATP-dependent DNA helicase DDX11
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30014925 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Homology
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Human
Match: DDX11 (DEAD/H-box helicase 11 [Source:HGNC Symbol;Acc:HGNC:2736]) HSP 1 Score: 406.757 bits (1044), Expect = 5.306e-128 Identity = 239/734 (32.56%), Postives = 397/734 (54.09%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEE--VSNDIENQENEGS---ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKP-IGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM-----------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMK-VMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-----SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 ES EE V+ Y SDEE V++ ++ E++ ITKIYYCSRTHSQL Q + E+ K+ + + GSRQNLC+N V L S+ LIN++C+D+Q+ K E K+R+ A C F ++E++ + + D+EQL+ G ++ CP+YG + + A LV++PYQ +L+ A R A+ I ++D +VI DEAHNL DTI+ ++SV++ S L QL Y+ +Y +R +KNL+YL+Q+ + + + I + SLS +FLF++ ++ + L ++ + +KS ++ KL V R+ L G Q ++ Q +S+ +T + ++ ++ F+AA+ + D +++ + L+ FL+++P + +V +CR++++ GGTMQP SDF +L A ++R+ FSC HVI + V+ G++ N PL FTF+ R M+ G I ++ P GVV FF SY + ++ W+ G+L + K ++ EPK + Q E V+ +++ ++ GA+L +V+G KMSEGINFSD L R V++VG+P+P RS LQEKM+Y+++ + + + NL MK VNQ+IGRAIRH+ DFA+++LLD+RYA +++ LP+W++ V ++ I+ ++ F + Sbjct: 165 ESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGA----VFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS--NQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSR---------CIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAK---------LPAWIRARVEVKATFGPAIAAVQKFHR 874 HSP 2 Score: 61.6178 bits (148), Expect = 6.383e-9 Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 88 MSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 36
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Human
Match: DDX11 (DEAD/H-box helicase 11 [Source:HGNC Symbol;Acc:HGNC:2736]) HSP 1 Score: 405.986 bits (1042), Expect = 1.911e-127 Identity = 239/732 (32.65%), Postives = 396/732 (54.10%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEE--VSNDIENQENEGS---ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKP-IGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM-----------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMK-VMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-----SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSF 2523 ES EE V+ Y SDEE V++ ++ E++ ITKIYYCSRTHSQL Q + E+ K+ + + GSRQNLC+N V L S+ LIN++C+D+Q+ K E K+R+ A C F ++E++ + + D+EQL+ G ++ CP+YG + + A LV++PYQ +L+ A R A+ I ++D +VI DEAHNL DTI+ ++SV++ S L QL Y+ +Y +R +KNL+YL+Q+ + + + I + SLS +FLF++ ++ + L ++ + +KS ++ KL V R+ L G Q ++ Q +S+ +T + ++ ++ F+AA+ + D +++ + L+ FL+++P + +V +CR++++ GGTMQP SDF +L A ++R+ FSC HVI + V+ G++ N PL FTF+ R M+ G I ++ P GVV FF SY + ++ W+ G+L + K ++ EPK + Q E V+ +++ ++ GA+L +V+G KMSEGINFSD L R V++VG+P+P RS LQEKM+Y+++ + + + NL MK VNQ+IGRAIRH+ DFA+++LLD+RYA +++ LP+W++ V ++ I+ ++ F Sbjct: 191 ESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGA----VFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS--NQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSR---------CIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAK---------LPAWIRARVEVKATFGPAIAAVQKF 898 HSP 2 Score: 74.7146 bits (182), Expect = 5.564e-13 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 F FP+ PY Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Human
Match: DDX11 (DEAD/H-box helicase 11 [Source:HGNC Symbol;Acc:HGNC:2736]) HSP 1 Score: 352.058 bits (902), Expect = 1.567e-107 Identity = 226/732 (30.87%), Postives = 373/732 (50.96%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEE--VSNDIENQENEGS---ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPI-GKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM-----------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMK-VMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-----SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSF 2523 ES EE V+ Y SDEE V++ ++ E++ ITKIYYCSRTHSQL Q + E+ K+ + + GSRQNLC+N V L S+ LIN++C+D+Q+ K E K+R+ A C F ++E++ + + D+EQL+ G ++ CP+YG + + A LV++PYQ +L+ A R A+ I ++D +VI DEAHNL DTI+ ++SV++ S L QL Y+ +Y +R +KNL+YL+Q+ + + + I + SLS +FLF++ ++ + L ++ + +KS ++ KL V R+ L G Q ++ Q +S+ +T + ++ ++ F+AA+ + D +++ + L+ FL+++P + +V +CR++++ GGTMQP SDF +L A ++R+ FSC HVI + V+ G++ N PL FTF+ R MI + EPK + Q E V+ +++ ++ GA+L +V+G KMSEGINFSD L R V++VG+P+P RS LQEKM+Y+++ + + + NL MK VNQ+IGRAIRH+ DFA+++LLD+RYA +++ LP+W++ V ++ I+ ++ F Sbjct: 191 ESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGA----VFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS--NQPLEFTFQKRELPQMI--------------------------------------------------FQEPKSAHQVEQVLLAYSR---------CIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAK---------LPAWIRARVEVKATFGPAIAAVQKF 848 HSP 2 Score: 74.7146 bits (182), Expect = 4.472e-13 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 F FP+ PY Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Human
Match: DDX11 (DEAD/H-box helicase 11 [Source:HGNC Symbol;Acc:HGNC:2736]) HSP 1 Score: 351.288 bits (900), Expect = 2.466e-106 Identity = 221/691 (31.98%), Postives = 362/691 (52.39%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEE--VSNDIENQENEGS---ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKP-IGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM-----------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMK-VMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKI 2415 ES EE V+ Y SDEE V++ ++ E++ ITKIYYCSRTHSQL Q + E+ K+ + + GSRQNLC+N V L S+ LIN++C+D+Q+ K E K+R+ A C F ++E++ + + D+EQL+ G ++ CP+YG + + A LV++PYQ +L+ A R A+ I ++D +VI DEAHNL DTI+ ++SV++ S L QL Y+ +Y +R +KNL+YL+Q+ + + + I + SLS +FLF++ ++ + L ++ + +KS ++ KL V R+ L G Q ++ Q +S+ +T + ++ ++ F+AA+ + D +++ + L+ FL+++P + +V +CR++++ GGTMQP SDF +L A ++R+ FSC HVI + V+ G++ N PL FTF+ R M+ G I ++ P GVV FF SY + ++ W+ G+L + K ++ EPK + Q E V+ +++ ++ GA+L +V+G KMSEGINFSD L R V++VG+P+P RS LQEKM+Y++ Q S +PV++ GR H+ A +R A I Sbjct: 191 ESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGA----VFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS--NQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSR---------CIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLD-QTLSPRPGTPREGSGGEPVHE--GRQPVHRQGHQAPEGFCQRSAPGPAI 863 HSP 2 Score: 73.9442 bits (180), Expect = 1.028e-12 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 F FP+ PY Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Human
Match: RTEL1 (regulator of telomere elongation helicase 1 [Source:HGNC Symbol;Acc:HGNC:15888]) HSP 1 Score: 154.066 bits (388), Expect = 1.058e-37 Identity = 95/332 (28.61%), Postives = 160/332 (48.19%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQ-CRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSC---EHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQ-NENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSE-------SSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L++ PG + ++V Q RS+I+ GT+ P S F+ + +I C H+I+ K Q+ V + L F+ R +E + + G +I P G++IFF SY VM+K +E W+++ + +++ LK +++EP+ +E + A + + +A + GA AV K SEG++FSD R VI+ G+PYP P + KM ++++ G S + Y A + VNQAIGR IRH+ D+ A+ L D R+A + LPSW++ V + +N +I ++ FF+ Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM---------QIPFPVCLENPHIID-KHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRSKGSFSETISAYYAR---------------VAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFA---------FADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750 HSP 2 Score: 105.916 bits (263), Expect = 1.362e-22 Identity = 70/195 (35.90%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVS--KNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGL 1116 I KI Y SRTHSQL QV+ EL TSY K+ C GSR+ LCI+ V + +S +L C RK C F Y +EE S + + +DIE LV +G K CP+Y + +A ++ MPY +L+ +R A I++K +VIFDEAHN+ + S L L +GL Sbjct: 106 IPKIIYASRTHSQLTQVINELRNTSYRPKV--CVLGSREQLCIHPEVKKQESNHLQIHLC--------------------RKKVASRSCHF--YNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGL 276 HSP 3 Score: 57.3806 bits (137), Expect = 1.169e-7 Identity = 24/78 (30.77%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDF 282 +FP++PY Q + M+++ ++++ GI ESPTGTGK+L +LC++L W E +++ + ++I + +Q + Sbjct: 12 DFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW---------REHLRDGISARKIAERAQGEL 80
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Celegans
Match: chl-1 (ATP-dependent DNA helicase chl-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21489]) HSP 1 Score: 397.897 bits (1021), Expect = 1.192e-125 Identity = 265/857 (30.92%), Postives = 451/857 (52.63%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEI--KQIEDDSQNDFD-WINAYAQSKKSK---LNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVS--------NDIENQENEG-SITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGAC---CSFKSYEKIEEVSKNIIRHPM-DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLI------KENQMDSEKATDELGNAMLTVRNFIAAVYYSL-DASILVEK---DVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 F+FP++PY Q+ LM E+ IE+RKIGIFESPTGTGKSLSVLCS++ WL + +L E+ K E D D W A + +++ + +Q + E+ + +DQ + ++ +D + + +E YN+DE+ +D++ +E + KI+Y SRTHSQL Q+ +EL KT + +I TC SR LC+N V +LK +LINEKC++L+K + + L K T C C F + +IE+V ++ + + ++ G S GCP++ +KS + LVL+PYQ +L+ R A IE+KDN+++ DEAHN+ +TIS + S ++ L L+ ++ Y Y + + NLLY++QLE++ S ++ F++ + ++ + + E+ L ++ +++K+ L K ++ ++ + L G +L+ E + + + + + ++++FI A+ D I+VEK + F++++P L ++V R+ I++GGTM+P L + + +D I FSC HVI+ Q + V T+ P + T++ R + +++ ++ PNGVVIF SY+ + ++ + G+L I++ K+V+ E +Q + + F+ +AK++KGA+LFAV+G KMSEGINF DEL R VI++G+PYP S L+E+M +++ Q + ++Y +L M VNQAIGRAIRH+ D+AA+ L D+RYA E+ RK L +W+ D ++ +I + +SFF+ Sbjct: 4 FSFPFQPYDIQLNLMREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTWLEAEELRISTDLSTRLGEVHTKITECDKITTADNWETAVREKMRAQDVETEILEQIQSRERLQSRIDQARRGMVEVSRKRKAPARDTDQFLEPQDEAAPSEEYNNDEKSEKQRDSDFFDDVDEEEEKPLKCLKIFYASRTHSQLEQLAEELAKTRFQPRIVTC--ASRGTLCVNEEVKKLKLNHLINEKCMELRKNGMSEKEKVQKLEKGTTKKTKTCATSCEFYNSTQIEDVVNGVLSNKLKSTLEVSKQGKLSNGCPYFATRKSVPQCQLVLLPYQVLLHDGTRKAWGIELKDNVIVLDEAHNVLNTISSLYSAEISTKSLTLALRLIREYNAHYKLKLLAHNLLYMKQLESLTSKMLIFLNSQ-SKEDVMTMAQLARNLNILEINLFKLAEYMEKTDLCKKFHGFYMRLQKEEIKKE--NEKPKLTGIQKLMAAKEAEPEPEAEPLPPPKPVPSPLFSLKSFIDALTNKCEDGRIIVEKSATEAKFRFMLLNPADRLSEVVTSARATILVGGTMEPAQLLVETLSRGS-IGADSIRRFSCCHVIDDSQLLAV-TVERTVDGKPFQLTYQTRGADTTLRSLATSIQALIPHIPNGVVIFVPSYDFLFNFQKKMKEFGILKRIEEKKAVFTESRQPTSD------------------VWDRFSRAAKTSKGAILFAVVGGKMSEGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDTQMPN-GGNLLYESLCMHAVNQAIGRAIRHRRDYAAVYLFDDRYA-----KESTRRK----LSTWIGDRTQVKLGFGEIIRKTRSFFE 825
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Celegans
Match: chl-1 (ATP-dependent DNA helicase chl-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21489]) HSP 1 Score: 397.897 bits (1021), Expect = 1.192e-125 Identity = 265/857 (30.92%), Postives = 451/857 (52.63%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEI--KQIEDDSQNDFD-WINAYAQSKKSK---LNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVS--------NDIENQENEG-SITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGAC---CSFKSYEKIEEVSKNIIRHPM-DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLI------KENQMDSEKATDELGNAMLTVRNFIAAVYYSL-DASILVEK---DVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 F+FP++PY Q+ LM E+ IE+RKIGIFESPTGTGKSLSVLCS++ WL + +L E+ K E D D W A + +++ + +Q + E+ + +DQ + ++ +D + + +E YN+DE+ +D++ +E + KI+Y SRTHSQL Q+ +EL KT + +I TC SR LC+N V +LK +LINEKC++L+K + + L K T C C F + +IE+V ++ + + ++ G S GCP++ +KS + LVL+PYQ +L+ R A IE+KDN+++ DEAHN+ +TIS + S ++ L L+ ++ Y Y + + NLLY++QLE++ S ++ F++ + ++ + + E+ L ++ +++K+ L K ++ ++ + L G +L+ E + + + + + ++++FI A+ D I+VEK + F++++P L ++V R+ I++GGTM+P L + + +D I FSC HVI+ Q + V T+ P + T++ R + +++ ++ PNGVVIF SY+ + ++ + G+L I++ K+V+ E +Q + + F+ +AK++KGA+LFAV+G KMSEGINF DEL R VI++G+PYP S L+E+M +++ Q + ++Y +L M VNQAIGRAIRH+ D+AA+ L D+RYA E+ RK L +W+ D ++ +I + +SFF+ Sbjct: 4 FSFPFQPYDIQLNLMREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTWLEAEELRISTDLSTRLGEVHTKITECDKITTADNWETAVREKMRAQDVETEILEQIQSRERLQSRIDQARRGMVEVSRKRKAPARDTDQFLEPQDEAAPSEEYNNDEKSEKQRDSDFFDDVDEEEEKPLKCLKIFYASRTHSQLEQLAEELAKTRFQPRIVTC--ASRGTLCVNEEVKKLKLNHLINEKCMELRKNGMSEKEKVQKLEKGTTKKTKTCATSCEFYNSTQIEDVVNGVLSNKLKSTLEVSKQGKLSNGCPYFATRKSVPQCQLVLLPYQVLLHDGTRKAWGIELKDNVIVLDEAHNVLNTISSLYSAEISTKSLTLALRLIREYNAHYKLKLLAHNLLYMKQLESLTSKMLIFLNSQ-SKEDVMTMAQLARNLNILEINLFKLAEYMEKTDLCKKFHGFYMRLQKEEIKKE--NEKPKLTGIQKLMAAKEAEPEPEAEPLPPPKPVPSPLFSLKSFIDALTNKCEDGRIIVEKSATEAKFRFMLLNPADRLSEVVTSARATILVGGTMEPAQLLVETLSRGS-IGADSIRRFSCCHVIDDSQLLAV-TVERTVDGKPFQLTYQTRGADTTLRSLATSIQALIPHIPNGVVIFVPSYDFLFNFQKKMKEFGILKRIEEKKAVFTESRQPTSD------------------VWDRFSRAAKTSKGAILFAVVGGKMSEGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDTQMPN-GGNLLYESLCMHAVNQAIGRAIRHRRDYAAVYLFDDRYA-----KESTRRK----LSTWIGDRTQVKLGFGEIIRKTRSFFE 825
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Celegans
Match: rtel-1 (Regulator of telomere elongation helicase 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93575]) HSP 1 Score: 187.578 bits (475), Expect = 6.295e-49 Identity = 185/733 (25.24%), Postives = 322/733 (43.93%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEK--IEEVSKNIIR-HPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQ--------------LIKENQMDSEKATDELGNAMLTVRNFIAAVY--YSLDASILVEKDVGLTFLVVDPGKYLKDIVNQC----------------------------------RSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMT-LGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQS--------KGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-------SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 + I+Y SRTHSQL QV+ EL +T Y + T GSR++ CIN V ++K N C L V+ AC + ++ +++++ + + MDIE V G ++ CP++ ++ A L+L+PY +++P R K+++K++IVIFDEAHNL S +L + + +++LK + + + + S I+ + I++ + + L K + E ++D++ S+L S + D ++ + A F N L+ +N+ E A E G+ M V +F+ ++Y ++ D + V ++ VDP K + C R++++ GT+ P F+ + N EH + +Q+ V+T + K L +F+NR N + + L + P G++IFFSSY+ MD+++ W++ + +++K K V +EP+ E + AI RL +T GA L AV K+SEGI+F D +R VII+GIPYP + K Y++ G +SS+ Y A + VNQAIGR +RHK+DF ++L+D RYA ++ E+ P WL++++S +++T+ + FF+ Sbjct: 102 VPTIFYASRTHSQLEQVVHELNRTEYK-WVKTTILGSREHFCINQKVKKIKESNRQAHVCRGL-------------------VSKRACHYYNKFDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPYFMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELTSTSIALCIEELKKVLALLVDEEETARSEADAETGAFGSAKIDLTKKLIENLRTEDLMTVLEKIFSLEEEMDKLFG---SSQLKSVPPLSGK---ASDGEILLETLAKAGFDANSVERLVDVLRDAISYLLSKNE---EVALTEKGDGMEKVADFLLSIYSTHAQDVAAAVGEETVKLVDRVDP----KTVARNCKLYIQKDKDNEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA------ILENEHAL---KQVPVLTSIVTRGKRGGLAGSFQNRKNLDYVTGVAEALLRVMEVIPQGILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPRA---KEELAAI---------RL----RYTQGVSEQHGAALLAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDERVVLKKMYLDDLMGRKDTKSERQSSQDWYQMEAFRAVNQAIGRVLRHKDDFGTVVLMDTRYAS----AKPEM------FPKWLRNTIS-RSDTDGCALKTSRFFK 765 HSP 2 Score: 55.8398 bits (133), Expect = 1.377e-7 Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 31 NQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQ 216 N + FP+EPY Q M + ++++ ESPTGTGK+LS+LCS+L W+ +E + Sbjct: 14 NPKLSVKFPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKETK 75
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Celegans
Match: rtel-1 (Regulator of telomere elongation helicase 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93575]) HSP 1 Score: 187.578 bits (475), Expect = 6.295e-49 Identity = 185/733 (25.24%), Postives = 322/733 (43.93%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEK--IEEVSKNIIR-HPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQ--------------LIKENQMDSEKATDELGNAMLTVRNFIAAVY--YSLDASILVEKDVGLTFLVVDPGKYLKDIVNQC----------------------------------RSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMT-LGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQS--------KGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-------SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 + I+Y SRTHSQL QV+ EL +T Y + T GSR++ CIN V ++K N C L V+ AC + ++ +++++ + + MDIE V G ++ CP++ ++ A L+L+PY +++P R K+++K++IVIFDEAHNL S +L + + +++LK + + + + S I+ + I++ + + L K + E ++D++ S+L S + D ++ + A F N L+ +N+ E A E G+ M V +F+ ++Y ++ D + V ++ VDP K + C R++++ GT+ P F+ + N EH + +Q+ V+T + K L +F+NR N + + L + P G++IFFSSY+ MD+++ W++ + +++K K V +EP+ E + AI RL +T GA L AV K+SEGI+F D +R VII+GIPYP + K Y++ G +SS+ Y A + VNQAIGR +RHK+DF ++L+D RYA ++ E+ P WL++++S +++T+ + FF+ Sbjct: 102 VPTIFYASRTHSQLEQVVHELNRTEYK-WVKTTILGSREHFCINQKVKKIKESNRQAHVCRGL-------------------VSKRACHYYNKFDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPYFMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELTSTSIALCIEELKKVLALLVDEEETARSEADAETGAFGSAKIDLTKKLIENLRTEDLMTVLEKIFSLEEEMDKLFG---SSQLKSVPPLSGK---ASDGEILLETLAKAGFDANSVERLVDVLRDAISYLLSKNE---EVALTEKGDGMEKVADFLLSIYSTHAQDVAAAVGEETVKLVDRVDP----KTVARNCKLYIQKDKDNEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA------ILENEHAL---KQVPVLTSIVTRGKRGGLAGSFQNRKNLDYVTGVAEALLRVMEVIPQGILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPRA---KEELAAI---------RL----RYTQGVSEQHGAALLAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDERVVLKKMYLDDLMGRKDTKSERQSSQDWYQMEAFRAVNQAIGRVLRHKDDFGTVVLMDTRYAS----AKPEM------FPKWLRNTIS-RSDTDGCALKTSRFFK 765 HSP 2 Score: 55.8398 bits (133), Expect = 1.377e-7 Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 31 NQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQ 216 N + FP+EPY Q M + ++++ ESPTGTGK+LS+LCS+L W+ +E + Sbjct: 14 NPKLSVKFPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKETK 75
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Celegans
Match: xpd-1 (XPD (Xeroderma Pigmentosum complementation group D) related [Source:UniProtKB/TrEMBL;Acc:Q9N3L2]) HSP 1 Score: 142.51 bits (358), Expect = 9.191e-35 Identity = 90/319 (28.21%), Postives = 167/319 (52.35%), Query Frame = 1 Query: 1528 YSLDASILVEKDVGLTFLVV-----DPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKD 2469 YS S++VE G V+ D ++ ++++ +S+I+ GT+ P + L + PS I +F+ + A+ + + + + V + FE R + A+I+ G++ L + S P+G+V+FF+SY M+ +I W + ++ E+ K K ++IE +L+ + + + S +GAVLF+V K+SEGI+FS L R VI++GIPY T S +L+ ++ Y+ Q+G + + + + AM+ Q +GRA+R K D+ ++ D+R+ S N+ ++GK LP W+++ Sbjct: 408 YSKGFSVIVEPQDGSQLAVITLSCHDASIAIRPVMSRFQSVIITSGTLSPLEMYPKVLDFD---PS-VIASFT---MTLARPCLSPLVVARGNDQVAMTSRFEQRADVAVIRNYGNLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQHIIDELMKYKLLFIETNDALETSAA----------------LEKYVEACDSGRGAVLFSVARGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYLRDQFGIKENDFLTFD-AMRHTAQCMGRALRSKTDYGLMVFADKRF------SRND-KRGK--LPRWMQE 693 HSP 2 Score: 80.4925 bits (197), Expect = 2.668e-15 Identity = 63/243 (25.93%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQEL-LKTSYADK-----IA--TCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKV---TTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSR 1230 + K+ YCSRT ++ + ++E+ + Y +K +A T +R+NLC+N V L+ N ++ C ++T + A++++ T AC F+++E +N + ++E L G + CP++ +++ N+AH+V+ Y +L+P A L SK + ++V+FDEAHN+ + + SV + + L++L+S + + R S N +L++ + L+E + R Sbjct: 67 LDKLVYCSRTIPEIEKCVEEMKVLYDYWEKETGQPVAKITVAMSARKNLCVNEPVAALRFGNTVDSAC----------QKLTASSARQKRAEDPTLEACDYFENFEAKSVPMQNGV---WNLEDLRSLGREKKICPYFTARQAINRAHIVVYSYHYILDPKIAELVSKDFSRKSVVVFDEAHNIDNVCIESMSVAISQKNADRALQELQS-LEGVVNRMKSSN---SEKLQSEYDKLVEGLKR 292
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Fly
Match: CG11403 (gene:FBgn0026876 transcript:FBtr0070245) HSP 1 Score: 361.688 bits (927), Expect = 1.547e-111 Identity = 251/870 (28.85%), Postives = 422/870 (48.51%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKN----KLEIKQIEDDSQNDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEE---VSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGA--CCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKID----SYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSA-----------LFGGNQLIKE---------NQMDSEKATDELGNAMLTVRNFIAAVYYSL----------------DASILVEKDVG-LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAK--SNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNS 2499 F FPY PY Q +LM EL+ +E+ ++GIFESPTGTGKSL++ C +L WL ++E E++ + E+ +++++S+ +W+ + +S+ + L Q+ I+ + + + E E++ +SD E E E+ +I++CSRTHSQL Q++ EL KT + + + GSRQ LC N V +LK + L+NE+CLD+ T + +KK ++T A C FK+ +E + + P+DIE+L G GGC +Y + + A L+L+PYQ +L +AR I +K +IVI DEAHNL D+++ ++ ++ L Q+ Y + +RF++KNLL + Q+ I L++ + ++ + S + E + + L +L+F +++ A K++ +E RP ++ A Q +KE ++ E +EL + + V S D ILV+ G L ++++DP + DIV + R++++ GGTMQP + +LF DR+ HV+ A + + PL F F +R + M++ I ++ P GVV F SY +DK+ + + G L I KSV+ E S + ++ N+ + K ++ GA+L +V+G K+SEG+NF+D+L R V++VG+PY + SP L+++M +++++ G + Y NL +K VNQ IGRA+RH D+A + LLD+R+AD KI +GK LP W+ + N N Sbjct: 18 FGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELAKLKEESEQSSNWLESQGKSRAQRAELLRLQHLQALLDKQEQQLDQIRKGAK--KHKRQGRVHPGKLEELEKDLDPESDSDSEHETADGPQEAAEDRYRPVQIFFCSRTHSQLAQIVAELRKTPHGQSVRSISLGSRQQLCGNPAVRKLKHVGLMNERCLDM-----ATKKARPNPSKKSRLTAEANSRCPFKAASLVESLRDLALTEPLDIEELANEGTACGGCSYYASRSAVEHAQLILLPYQLLLQKSARNQLGISLKGSIVIVDEAHNLLDSVAQLHGSEISRQQLERAKVQISGYKDHFQKRFTTKNLLKINQIIFIIRRLLKILDQRKELQSNGCSMMRTYELTAEGDFFNIDLCELLDFCARTRFARKVQGRADRMEREP----RPSENQAPVSTARSLILQRLASEQKLKEKTKSVKRRVEDINKEDKAEELQEQQKPTKKPVEEVAPSPIRPLLAFLETLTSNAEDGRILVDPVGGTLKYILLDPAEQFADIVAEARAIVIAGGTMQPTKELKEQLFTGCH---DRLVERFYNHVV-ANDAILPFVISNGPSGAPLSFKFAHRGSAEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSGTLETISGRKSVFREVSGSAEQ------------------LLDNYALAIKRPASYGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNSLSPELRQRMQHLDEKLGPGAGNEYYENLCVKAVNQCIGRAVRHIKDYACVYLLDKRFAD-PKI------RGK--LPKWISRHIVEANAANG 845
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Fly
Match: CG4078 (gene:FBgn0029798 transcript:FBtr0070807) HSP 1 Score: 155.606 bits (392), Expect = 1.712e-38 Identity = 94/328 (28.66%), Postives = 165/328 (50.30%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVN-QCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIM---YHNL-AMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTN---SLISELKSFFQ 2529 + F +PG ++ ++N Q RS+I+ GT+ P AE H+++ + Q+ V +G L + NR+N I + G L++ P+G+++FF SY +++K ++ WQ+ G+ ++I K +++EP+ Q FT M F + + +KGAV AV K+SEG++F+D R VII G+P+P + P + K Y+E E+ + ++NL A + VNQAIGR IRH+ND+ AI+L D R+ D +++ + L W++ + + + ++ EL+ FF+ Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLI------AELAIPVAQHLENPHIVD-QSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQ-------FTS---------TMEEFYQAIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQ---------LSKWIRGHLGDRPQCSPFGPIVRELRQFFK 749 HSP 2 Score: 95.9005 bits (237), Expect = 6.918e-20 Identity = 67/220 (30.45%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 517 NQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNI--IRHP--MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSS 1164 + N + K+ Y SRTHSQL Q ++EL +T+YA+ + + GSR LCI+ V + + + C K +V + C S++ E K+ +R P MDIE LV G + CP++ ++ +A + MPY +L+P AR A+KIE+ + IVI DEAHN+ + SV++ S + ++ + +Q F+S Sbjct: 99 GRANNWGVPKVIYASRTHSQLTQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMREQGNSNKTNMC-------------------KLRVHSKTC----SFQMRVESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIED----VTHIMQVFAS 290 HSP 3 Score: 67.0106 bits (162), Expect = 5.458e-11 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIK 234 +FP+EPYP Q M ++ + G+ ESPTGTGK+LS+LCSSL W+ Q +++K Sbjct: 12 HFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMVK 73
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Fly
Match: CG4078 (gene:FBgn0029798 transcript:FBtr0332398) HSP 1 Score: 155.606 bits (392), Expect = 1.712e-38 Identity = 94/328 (28.66%), Postives = 165/328 (50.30%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVN-QCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIM---YHNL-AMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTN---SLISELKSFFQ 2529 + F +PG ++ ++N Q RS+I+ GT+ P AE H+++ + Q+ V +G L + NR+N I + G L++ P+G+++FF SY +++K ++ WQ+ G+ ++I K +++EP+ Q FT M F + + +KGAV AV K+SEG++F+D R VII G+P+P + P + K Y+E E+ + ++NL A + VNQAIGR IRH+ND+ AI+L D R+ D +++ + L W++ + + + ++ EL+ FF+ Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLI------AELAIPVAQHLENPHIVD-QSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQ-------FTS---------TMEEFYQAIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQ---------LSKWIRGHLGDRPQCSPFGPIVRELRQFFK 749 HSP 2 Score: 95.9005 bits (237), Expect = 6.918e-20 Identity = 67/220 (30.45%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 517 NQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNI--IRHP--MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSS 1164 + N + K+ Y SRTHSQL Q ++EL +T+YA+ + + GSR LCI+ V + + + C K +V + C S++ E K+ +R P MDIE LV G + CP++ ++ +A + MPY +L+P AR A+KIE+ + IVI DEAHN+ + SV++ S + ++ + +Q F+S Sbjct: 99 GRANNWGVPKVIYASRTHSQLTQAMRELKRTAYAN-MRSVVLGSRDQLCIHPEVMREQGNSNKTNMC-------------------KLRVHSKTC----SFQMRVESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIED----VTHIMQVFAS 290 HSP 3 Score: 67.0106 bits (162), Expect = 5.458e-11 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIK 234 +FP+EPYP Q M ++ + G+ ESPTGTGK+LS+LCSSL W+ Q +++K Sbjct: 12 HFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMVK 73
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Fly
Match: Xpd (gene:FBgn0261850 transcript:FBtr0071576) HSP 1 Score: 120.168 bits (300), Expect = 1.517e-27 Identity = 71/302 (23.51%), Postives = 142/302 (47.02%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSV 2475 L F +D + + ++ +++++ GT+ P + L + S T A+ + M + + V + FE R + A+I+ G + + + P+G+V FF+SY ++ ++ W +G++ + + K ++IE + + + + N+ + +GAVL AV K+SEG++F R V++ GIPY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRA+R K D+ +I D+R++ K S LP W+++ + Sbjct: 433 LHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTL-------ARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALM----------------NYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFD-AMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKRSR---------LPKWIQEHL 701 HSP 2 Score: 68.5514 bits (166), Expect = 1.885e-11 Identity = 52/201 (25.87%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 523 ENEGSITKIYYCSRTHSQLNQVLQEL--LKTSY------ADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRK---VTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKL 1089 E+ ++ K+ YCSRT ++ +V+ EL L Y SR+N+CI+ V++ + ++ KC L T + ++R T C F+ + +E + I+ L G CP++ + + AH+V+ Y +L+P A++ SK +++ V+FDEAHN+ + D SVK+ Sbjct: 62 EHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGL----------TASYIRERHEMDTETPICQYFEGF-SLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKI 251
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Zebrafish
Match: ddx11 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:NCBI gene;Acc:492353]) HSP 1 Score: 475.707 bits (1223), Expect = 7.208e-155 Identity = 280/890 (31.46%), Postives = 469/890 (52.70%), Query Frame = 1 Query: 25 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNE---LIKNKLEIKQIEDDSQN----DFDWINAYAQSKK-----SKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVV-NYNSDEEVS---------NDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQK-PIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI-DSYSSLSCV---------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRP------RQSSALFGGNQLIKENQMD---SEKATDE---LGNAMLTVRNFIAAVYYS-LDASILVEKDV-----GLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 M ++ F FP++PYP Q M LY +++RK+GIFESPTGTGKSLS++C +L WL +E + E L++ + + +++ + N + DW++ + Q K +KL + +E + + + EE +V Y SD+E + ND ++ E +TKIYYCSRTHSQL Q + E+ K+ Y D + GSRQNLCIN V +L ++ ++NE+CL++QK K + +++ +K+ + A C F +E + + ++ D+EQL+ G ++ CP+Y + S A +V++PYQ++L+ + R AS I++KD IVI DEAHNL DTIS ++S ++ L QL Y +Y R +KNL+Y++Q+ + L+ + K+ + ++ SC +FLFK ++ + L ++ + +KS ++ KL E + R++ L Q ++ D + A ++ + + M+ +F+ A+ + D +++++ L FL+++ + I+ +CR++I+ GGTMQP +DF +L +A +RI FSC HVI + + ++ L L FTF+ R++ M++ TG + ++ + P GVV FF SY +I+ W+S G+L ++ K ++ EPK++ Q E V++ ++K ++ + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + +L MK VNQ+IGRAIRH+ D+A I+L D RYA R G L LP W++ S + + FF Sbjct: 1 MESKSGRFPFPFQPYPIQESFMEALYTALDQRKVGIFESPTGTGKSLSLICGALTWLRDYEEQRKQEAARLLEGQKDSDVVKEKNSNSGPPEPDWVSEFVQKKAERDMVNKLKADEDDE------------------AVKLLQLSREGAEPETHSPEEEGLIVAEYESDDEATPKSRLCDDDNDDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQKSPYGDAVRLVNLGSRQNLCINPEVVRLGNVQMMNERCLEMQKNKHEKRQKASDSESKRSRGLAKATCVFSRFENLMAMKDEVLVKVRDVEQLIQHGRETHTCPYYSTRMSIPAAQVVVLPYQSLLHASTRKASGIKLKDQIVIIDEAHNLMDTISAIHSAEISGGQLCRAHSQLSQYCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGQNPNTQSCQTGSELLTINDFLFKAQVDNINLFKVQKYFEKSMISRKLCGFAEKYEGSGINTHSSSKNKENRRTEGLGRFLQTLQSKPTDVSEQQMAVEDKPIMASPMMLAESFLFALTNANKDGRVVIQRQACVAQSSLKFLLLNAAVHFAQILQECRAVIIAGGTMQPVADFKEQLLFSAGVTEERILEFSCGHVIPPENILPIV-LCAGPSGQQLEFTFQTRDSPQMMEETGRVLSNLCNIVPGGVVCFFPSYEYEKRILGHWESTGILQRLQSKKKIFQEPKKASQVEQVLSEYSK---------CIQRCSNIGGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVAGKSPGKALVESLCMKAVNQSIGRAIRHRGDYACIVLCDHRYA----------RTGTLQKLPEWIRSSTHTHATFGPAFASARRFF 852
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Zebrafish
Match: ddx11 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:NCBI gene;Acc:492353]) HSP 1 Score: 474.167 bits (1219), Expect = 6.155e-154 Identity = 280/903 (31.01%), Postives = 471/903 (52.16%), Query Frame = 1 Query: 25 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNE---LIKNKLEIKQIEDDSQN----DFDWINAYAQSK-------------------KSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSND---------IENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQK-PIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI-DSYSSLSCV---------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRP------RQSSALFGGNQLIKENQMD---SEKATDE---LGNAMLTVRNFIAAVYYS-LDASILVEKDV-----GLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 M ++ F FP++PYP Q M LY +++RK+GIFESPTGTGKSLS++C +L WL +E + E L++ + + +++ + N + DW++ + Q K + +L + N L +K ++ + +S +E E V Y SD+E + ++ E +TKIYYCSRTHSQL Q + E+ K+ Y D + GSRQNLCIN V +L ++ ++NE+CL++QK K + +++ +K+ + A C F +E + + ++ D+EQL+ G ++ CP+Y + S A +V++PYQ++L+ + R AS I++KD IVI DEAHNL DTIS ++S ++ L QL Y +Y R +KNL+Y++Q+ + L+ + K+ + ++ SC +FLFK ++ + L ++ + +KS ++ KL E + R++ L Q ++ D + A ++ + + M+ +F+ A+ + D +++++ L FL+++ + I+ +CR++I+ GGTMQP +DF +L +A +RI FSC HVI + + ++ L L FTF+ R++ M++ TG + ++ + P GVV FF SY +I+ W+S G+L ++ K ++ EPK++ Q E V++ ++K ++ + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + +L MK VNQ+IGRAIRH+ D+A I+L D RYA R G L LP W++ S + + FF Sbjct: 1 MESKSGRFPFPFQPYPIQESFMEALYTALDQRKVGIFESPTGTGKSLSLICGALTWLRDYEEQRKQEAARLLEGQKDSDVVKEKNSNSGPPEPDWVSEFVQKKAERDMVNKLKDEELKRKKREERLEMIRHNAQLRYAMKRKADEDDEAVKLLQLSREGAEPETHSPEE--EGLIVAEYESDDEATPKSRLCDDDNDDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQKSPYGDAVRLVNLGSRQNLCINPEVVRLGNVQMMNERCLEMQKNKHEKRQKASDSESKRSRGLAKATCVFSRFENLMAMKDEVLVKVRDVEQLIQHGRETHTCPYYSTRMSIPAAQVVVLPYQSLLHASTRKASGIKLKDQIVIIDEAHNLMDTISAIHSAEISGGQLCRAHSQLSQYCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGQNPNTQSCQTGSELLTINDFLFKAQVDNINLFKVQKYFEKSMISRKLCGFAEKYEGSGINTHSSSKNKENRRTEGLGRFLQTLQSKPTDVSEQQMAVEDKPIMASPMMLAESFLFALTNANKDGRVVIQRQACVAQSSLKFLLLNAAVHFAQILQECRAVIIAGGTMQPVADFKEQLLFSAGVTEERILEFSCGHVIPPENILPIV-LCAGPSGQQLEFTFQTRDSPQMMEETGRVLSNLCNIVPGGVVCFFPSYEYEKRILGHWESTGILQRLQSKKKIFQEPKKASQVEQVLSEYSK---------CIQRCSNIGGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVAGKSPGKALVESLCMKAVNQSIGRAIRHRGDYACIVLCDHRYA----------RTGTLQKLPEWIRSSTHTHATFGPAFASARRFF 881
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Zebrafish
Match: ercc2 (excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]) HSP 1 Score: 188.734 bits (478), Expect = 1.215e-49 Identity = 168/706 (23.80%), Postives = 309/706 (43.77%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK--------TSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHP--MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEF-----VSRKIDSY----------------SSLSCVEFL------FKTYLN-EMKLDRILN--------------FIDKSKL---AYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVS 2478 +TK+ YCSRT ++ +V++EL K T + SR+NLCI+ V+ L+ ++ KC L + A+ + C F YE+ + V + + P +++ L G + G CP++ + + A++V+ Y +L+P A L SK K ++V+FDEAHN+ + D VN + L T ++ L++ I + + ++K L + L+E V+R+ D Y S+ E F YL +++ ++ ID+ L A +LR+ +R +E D+ P + F L+ + + T+ N + L F +DP +K + + +++I+ GT+ P D R+ R T + + A+ + + +G + V + FE R + A+I+ G++ L + + P+G+V FF+SY M+ I+ W +G+L I++ K ++IE + + + + + + ++ +GA+L +V K+SEGI+F R VI+ G+PY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRAIR K D+ +I D+RYA K +GK LP W+++ ++ Sbjct: 67 VTKLVYCSRTVPEIEKVVEELRKLMDYYSKQTGVKNDFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLTA--------SYIRAQHQSNPNQPVCQF--YEEFDNVGRQVPIPPGIYNLDDLKDFGRRKGWCPYFLARYALLHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQTNVETLQNTISRIKETDAAK-------LREEYRRLVEGLKEANVARETDIYLSNPVLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKDIFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSPITLISHFA--TLVSTYSKGFTIIIEPFEDKTPTIANPV------------------LHFSCMDPSIAIKPVFGRFQTVIITSGTLSPL-DIYPRILDF------RPVTMASFTMTLARTCLCPLIVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYMYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMA----------------LEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMIFADKRYARADK-------RGK--LPRWIQEHLT 702
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Zebrafish
Match: brip1 (BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]) HSP 1 Score: 147.517 bits (371), Expect = 9.032e-36 Identity = 95/329 (28.88%), Postives = 162/329 (49.24%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCE----HVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNE--NVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSES---SRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L+F ++P D+ + RS+++ GT+ P FS+ L FS + HVIN K Q+ V T+G + L TF++ A G + L + GV+ F SY ++DK+ + W + G+ ++++ K+V EP+ + + ++ + + +R A + GA+L AV K+SEG++F+D+ AR V+ +GIP+P + ++ KM Y +K S Y A + +NQA+GR IRH+ND+ A+IL+D+R+ + + N K GL W++ V + + LKSF Q Sbjct: 617 LSFWCLNPAVAFSDLSSTVRSIVLTSGTLSPMGSFSSELGIK----------FSIQLEANHVIN-KSQVWVGTIGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSYKMLDKLRDRWTNTGLWDKLEECKTVITEPRGGGKGDFDELLQTYYE---------AIRGTAAKGEKRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRGLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRF----RTNPN---KYITGLSKWVRQLVRHHDTFTGAMQSLKSFSQ 918 HSP 2 Score: 80.4925 bits (197), Expect = 6.597e-15 Identity = 58/214 (27.10%), Postives = 106/214 (49.53%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLD-LQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLL 1176 I KI++ +RTH Q+ Q+ +EL +T Y+ + SR + C++ V + N NE+C + L+ G++ + + K R +T ++ V + + DIE+LV G K C +Y ++ +A +V PY +L+P R + +I +K+ IV+ DEAHN+ D + S L + L+ ++ + ++R + LL Sbjct: 270 IPKIFFGTRTHKQITQIARELKRTLYS-TVPMTILSSRDHTCVHPEV--VPHANR-NERCKEFLEAKNGRSCRYYHNVHKMRDQST-----------LQWV--HGLHQAWDIEELVRLGGKLRSCAYYAARELMQEACIVFCPYNYLLDPLIRESMEINLKEQIVVLDEAHNIEDCARESASFTLNQAQLLLARDEIDGMVTHNIRRDQHRPLL 466 HSP 3 Score: 52.7582 bits (125), Expect = 2.000e-6 Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 NFP + YP Q+ +M+ + + + + ESPTG+GKSL++LCS+L W Sbjct: 16 NFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAW 63
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Zebrafish
Match: brip1 (BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]) HSP 1 Score: 147.132 bits (370), Expect = 1.169e-35 Identity = 95/329 (28.88%), Postives = 162/329 (49.24%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCE----HVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNE--NVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSES---SRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L+F ++P D+ + RS+++ GT+ P FS+ L FS + HVIN K Q+ V T+G + L TF++ A G + L + GV+ F SY ++DK+ + W + G+ ++++ K+V EP+ + + ++ + + +R A + GA+L AV K+SEG++F+D+ AR V+ +GIP+P + ++ KM Y +K S Y A + +NQA+GR IRH+ND+ A+IL+D+R+ + + N K GL W++ V + + LKSF Q Sbjct: 617 LSFWCLNPAVAFSDLSSTVRSIVLTSGTLSPMGSFSSELGIK----------FSIQLEANHVIN-KSQVWVGTIGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSYKMLDKLRDRWTNTGLWDKLEECKTVITEPRGGGKGDFDELLQTYYE---------AIRGTAAKGEKRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRGLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRF----RTNPN---KYITGLSKWVRQLVRHHDTFTGAMQSLKSFSQ 918 HSP 2 Score: 80.4925 bits (197), Expect = 7.198e-15 Identity = 58/214 (27.10%), Postives = 106/214 (49.53%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLD-LQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLL 1176 I KI++ +RTH Q+ Q+ +EL +T Y+ + SR + C++ V + N NE+C + L+ G++ + + K R +T ++ V + + DIE+LV G K C +Y ++ +A +V PY +L+P R + +I +K+ IV+ DEAHN+ D + S L + L+ ++ + ++R + LL Sbjct: 270 IPKIFFGTRTHKQITQIARELKRTLYS-TVPMTILSSRDHTCVHPEV--VPHANR-NERCKEFLEAKNGRSCRYYHNVHKMRDQST-----------LQWV--HGLHQAWDIEELVRLGGKLRSCAYYAARELMQEACIVFCPYNYLLDPLIRESMEINLKEQIVVLDEAHNIEDCARESASFTLNQAQLLLARDEIDGMVTHNIRRDQHRPLL 466 HSP 3 Score: 52.7582 bits (125), Expect = 2.002e-6 Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 NFP + YP Q+ +M+ + + + + ESPTG+GKSL++LCS+L W Sbjct: 16 NFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAW 63
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Xenopus
Match: crat (carnitine O-acetyltransferase b [Source:Xenbase;Acc:XB-GENE-487012]) HSP 1 Score: 475.707 bits (1223), Expect = 3.539e-154 Identity = 291/901 (32.30%), Postives = 477/901 (52.94%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL----LVNQENQMNELIKNKLEIKQIEDD-SQNDFDWINAYAQSK-----KSKLN----LTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQ--------------ESNEENFVVNYNSDEEVSNDIENQENEGS-----ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCV-----------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM--------------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVE-----KDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAM----IKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLG-LPSWLKDSVSIQNNTNSLISELKSFFQ 2529 F FPYEPYP Q + M +LY +E K+GIFESPTGTGKSLS++C +L WL ++ + L E+K+ + S + DWI + Q K K+K+ + E+ K+ Q+K +K ++ T + S Q + +E +V Y SDEE + E+E +TKIYYCSRTHSQL+Q + E+ K+ + + GSRQN+C+N V +L ++ LIN++C+++Q+ K ++ + +K++ + A C F SYE+++ + + DIEQLV + CP+Y + + A +V++PYQ +L+ ++R AS I++KD +VI DEAHNL DTI+ + S ++ + L QL Y+ +Y R +KNL+Y++QL + ++ + + S V +FLF + ++ + L +I + KS ++ KL + + + + A G Q +++ D+E + ++ + F++A+ + D +++ L FL+++P + +++ +CRS+I+ GGTMQP SDF +L +A +RI FSC HVI A+ + ++ L N L FT++ R+ M + TG I ++ +F P G+V FF SY +I E W+ G+L + K ++ EPK++ Q + V+ ++K ++N + S + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP RSP LQEKMSY++K G + R++ NL MK VNQ+IGRAIRH+ D+A+I+LLD RY+ R LG LP W++ S ++ N + + ++ FFQ Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQEEAQALSVADTELKEKDTSASSTEPDWIAQFVQMKEEMDIKNKIKEEQLRRKKREEHLKQMKHNVQLKFASKRKREEDDETMRLLQLSQQILSGGGEKEALELDQEEQELLLVEYESDEETKKGPDRLEDEEDLEEEHVTKIYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRLGNVQLINDRCMEMQR--NKHEKKNKEPERKKRQESRAACPFYSYEQMQFLRDETLVEVKDIEQLVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITCMYSSQVSGAQLCQAHSQLMQYMDRYRSRLKAKNLMYVKQLVFLLEKFVQVMGGNVKQNPSFQKVAQDGTTLKSINDFLFHSQIDNINLFKIQRYCTKSMISRKLSGFVEKFKGTETCLANKESQKA--GLQQFLQDLSQKSRHTVGAPEGALEDAENGQLRTASPLMQIEGFLSALTNANQDGRVILHMQGTVAQSSLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAENILPIV-LCSGPTNQQLEFTYQKRDLPEMESIFMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLLKRLALKKKIFQEPKRANQVDQVLVEYSK---------CIKNCSQSGGAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPKTEGVSAGRVLIENLCMKAVNQSIGRAIRHRGDYASIVLLDHRYS----------RPAILGKLPQWIRSSTQVKPNFGAAFATIRKFFQ 889
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Xenopus
Match: crat (carnitine O-acetyltransferase b [Source:Xenbase;Acc:XB-GENE-487012]) HSP 1 Score: 474.167 bits (1219), Expect = 7.311e-154 Identity = 287/866 (33.14%), Postives = 475/866 (54.85%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL----LVNQENQMNELIKNKLEIKQIEDD-SQNDFDWINAYAQSK-----KSKLNLTDQN------EXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCV-----------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYS-LDASILVE-----KDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAM----IKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLG-LPSWLKDSVSIQNNTNSLISELK 2517 F FPYEPYP Q + M +LY +E K+GIFESPTGTGKSLS++C +L WL ++ + L E+K+ + S + DWI + Q K K+K+ +T L +++ + ++L++L ++ ++ K+ +QE +E +V Y SDEE E + S++ IYYCSRTHSQL+Q + E+ K+ + + GSRQN+C+N V +L ++ LIN++C+++Q+ K ++ + +K++ + A C F SYE+++ + + DIEQLV + CP+Y + + A +V++PYQ +L+ ++R AS I++KD +VI DEAHNL DTI+ + S ++ + L QL Y+ +Y R +KNL+Y++QL + ++ + + S V +FLF + ++ + L +I + KS ++ K VR + S L G + + N D+E + ++ + F++A+ + D +++ L FL+++P + +++ +CRS+I+ GGTMQP SDF +L +A +RI FSC HVI A+ + ++ L N L FT++ R+ M + TG I ++ +F P G+V FF SY +I E W+ G+L + K ++ EPK++ Q + V+ ++K ++N + S + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP RSP LQEKMSY++K G + R++ NL MK VNQ+IGRAIRH+ D+A+I+LLD RY+ R LG LP W++ S ++ N + + ++ Sbjct: 21 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQEEAQALSVADTELKEKDTSASSTEPDWIAQFVQMKEEMDIKNKIKVTCLTLDLIFPSCLLQREEDDETMRLLQLSQQILSGGGEKEALELDQE-EQELLLVEYESDEETKKGPEY-DIAVSLSCIYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRLGNVQLINDRCMEMQR--NKHEKKNKEPERKKRQESRAACPFYSYEQMQFLRDETLVEVKDIEQLVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITCMYSSQVSGAQLCQAHSQLMQYMDRYRSRLKAKNLMYVKQLVFLLEKFVQVMGGNVKQNPSFQKVAQDGTTLKSINDFLFHSQIDNINLFKIQRYCTKSMISRK---------------VRKQTYSLLLIGQAVTRLNLYDAENGQLRTASPLMQIEGFLSALTNANQDGRVILHMQGTVAQSSLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAENILPIV-LCSGPTNQQLEFTYQKRDLPEMESIFMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLLKRLALKKKIFQEPKRANQVDQVLVEYSK---------CIKNCSQSGGAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPKTEGVSAGRVLIENLCMKAVNQSIGRAIRHRGDYASIVLLDHRYS----------RPAILGKLPQWIRSSTQVKPNFGAAFATIR 847
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Xenopus
Match: crat (carnitine O-acetyltransferase b [Source:Xenbase;Acc:XB-GENE-487012]) HSP 1 Score: 460.299 bits (1183), Expect = 5.159e-149 Identity = 285/871 (32.72%), Postives = 449/871 (51.55%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL----LVNQENQMNELIKNKLEIKQIEDD-SQNDFDWINAYAQSK-------KSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSN------QESNEENFVVNYNSDEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCV-----------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQS-----SALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAM----IKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLG-LPSWLKDSVSIQNNTNSLISELKSFFQ 2529 F FPYEPYP Q + M +LY +E K+GIFESPTGTGKSLS++C +L WL ++ + L E+K+ + S + DWI + Q K K K + + E K + ++L K + N F N + +E +V Y SDEE E IYYCSRTHSQL+Q + E+ K+ + + GSRQN+C+N V +L ++ LIN++C+++Q+ K ++ + +K++ + A C F SYE+++ + + DIEQLV + CP+Y + + A +V++PYQ +L+ ++R AS I++KD +VI DEAHNL DTI+ + S ++ + L QL Y+ +Y R +KNL+Y++QL + ++ + + S V +FLF + ++ + L +++ L ++ + E G + P SAL NQ G +L ++ +A L FL+++P + +++ +CRS+I+ GGTMQP SDF +L +A +RI FSC HVI A+ + ++ L N L FT++ R+ M + TG I ++ +F P G+V FF SY +I E W+ G+L + K ++ EPK++ Q + V+ ++K S + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP RSP LQEKMSY++K G + R++ NL MK VNQ+IGRAIRH+ D+A+I+LLD RY+ R LG LP W++ S ++ N + + ++ FFQ Sbjct: 14 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQEEAQALSVADTELKEKDTSASSTEPDWIAQFVQMKEEMDIKNKIKEEQLRRKKREEHLKQMKHNVQLKFASKRKVTNLLFLSVIGQNTVTLELDQEEQELLLVEYESDEETKKGPEYD------IAIYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRLGNVQLINDRCMEMQR--NKHEKKNKEPERKKRQESRAACPFYSYEQMQFLRDETLVEVKDIEQLVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITCMYSSQVSGAQLCQAHSQLMQYMDRYRSRLKAKNLMYVKQLVFLLEKFVQVMGGNVKQNPSFQKVAQDGTTLKSINDFLFHSQIDNINLFKLIFMFVFMLLVGAPEGALEDAENGQLRTASPLMQIEGFLSALTNANQD---------------GRVILHMQGTVA--------------QSSLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAENILPIV-LCSGPTNQQLEFTYQKRDLPEMESIFMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLLKRLALKKKIFQEPKRANQVDQVLVEYSK-------------CIKSGGAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPKTEGVSAGRVLIENLCMKAVNQSIGRAIRHRGDYASIVLLDHRYS----------RPAILGKLPQWIRSSTQVKPNFGAAFATIRKFFQ 823
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Xenopus
Match: crat (carnitine O-acetyltransferase b [Source:Xenbase;Acc:XB-GENE-487012]) HSP 1 Score: 384.415 bits (986), Expect = 1.781e-120 Identity = 225/677 (33.23%), Postives = 357/677 (52.73%), Query Frame = 1 Query: 541 TKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQS-----SALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAM----IKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLG-LPSWLKDSVSIQNNTNSLISELKSFFQ 2529 +IYYCSRTHSQL+Q + E+ K+ + + GSRQN+C+N V +L ++ LIN++C+++Q+ K + + A C F SYE+++ + + DIEQLV + CP+Y + + A +V++PYQ +L+ ++R AS I++KD +VI DEAHNL DTI+ + S ++ + L QL Y+ +Y R +KNL+Y++QL + ++ + K+ F+F L L ++ + E G + P SAL NQ G +L ++ +A L FL+++P + +++ +CRS+I+ GGTMQP SDF +L +A +RI FSC HVI A+ + ++ L N L FT++ R+ M + TG I ++ +F P G+V FF SY +I E W+ G+L + K ++ EPK++ Q + V+ ++K ++N + S + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP RSP LQEKMSY++K G + R++ NL MK VNQ+IGRAIRH+ D+A+I+LLD RY+ R LG LP W++ S ++ N + + ++ FFQ Sbjct: 199 VQIYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRLGNVQLINDRCMEMQR------------NKHGEQESRAACPFYSYEQMQFLRDETLVEVKDIEQLVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITCMYSSQVSGAQLCQAHSQLMQYMDRYRSRLKAKNLMYVKQLVFLLEKFVQVMGGKLI---------FMFVFML----------------LVGAPEGALEDAENGQLRTASPLMQIEGFLSALTNANQD---------------GRVILHMQGTVA--------------QSSLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAENILPIV-LCSGPTNQQLEFTYQKRDLPEMESIFMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLLKRLALKKKIFQEPKRANQVDQVLVEYSK---------CIKNCSQSGGAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPKTEGVSAGRVLIENLCMKAVNQSIGRAIRHRGDYASIVLLDHRYS----------RPAILGKLPQWIRSSTQVKPNFGAAFATIRKFFQ 789 HSP 2 Score: 83.5741 bits (205), Expect = 7.297e-16 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL----LVNQENQMNELIKNKLEIKQIEDD-SQNDFDWINAYAQSKK 315 F FPYEPYP Q + M +LY +E K+GIFESPTGTGKSLS++C +L WL ++ + L E+K+ + S + DWI + Q K+ Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQEEAQALSVADTELKEKDTSASSTEPDWIAQFVQMKE 107
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Xenopus
Match: crat (carnitine O-acetyltransferase b [Source:Xenbase;Acc:XB-GENE-487012]) HSP 1 Score: 378.637 bits (971), Expect = 1.062e-118 Identity = 246/787 (31.26%), Postives = 399/787 (50.70%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL----LVNQENQMNELIKNKLEIKQIEDD-SQNDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSI------NNTTFKDCNYSNQ--------------ESNEENFVVNYNSDEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCV-----------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYS-LDASILVE-----KDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAM----IKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEK 2268 F FPYEPYP Q + M +LY +E K+GIFESPTGTGKSLS++C +L WL ++ + L E+K+ + S + DWI + Q K+ + +N+ + + L S ++ T + S Q + +E +V Y SDEE E IYYCSRTHSQL+Q + E+ K+ + + GSRQN+C+N V +L ++ LIN++C+++Q+ K ++ + +K++ + A C F SYE+++ + + DIEQLV + CP+Y + + A +V++PYQ +L+ ++R AS I++KD +VI DEAHNL DTI+ + S ++ + L QL Y+ +Y R +KNL+Y++QL + ++ + + S V +FLF + ++ + L +I + KS ++ KL V ++ L G + E D+E + ++ + F++A+ + D +++ L FL+++P + +++ +CRS+I+ GGTMQP SDF +L +A +RI FSC HVI A+ + ++ L N L FT++ R+ M + TG I ++ +F P G+V FF SY +I E W+ G+L + K V ++N N + S + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP RSP LQEKMSY++K Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQEEAQALSVADTELKEKDTSASSTEPDWIAQFVQMKE---EMDIKNKIKCYFICAISSSLTLDLIFPSCLLQREEDDETMRLLQLSQQILSGGGEKEALELDQEEQELLLVEYESDEETKKGPE-------YDIIYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRLGNVQLINDRCMEMQR--NKHEKKNKEPERKKRQESRAACPFYSYEQMQFLRDETLVEVKDIEQLVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITCMYSSQVSGAQLCQAHSQLMQYMDRYRSRLKAKNLMYVKQLVFLLEKFVQVMGGNVKQNPSFQKVAQDGTTLKSINDFLFHSQIDNINLFKIQRYCTKSMISRKLIFMF-------VFML-------LVGAPEGALE---DAENGQLRTASPLMQIEGFLSALTNANQDGRVILHMQGTVAQSSLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAENILPIV-LCSGPTNQQLEFTYQKRDLPEMESIFMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLLKRLALKKKVI--------HQN-------------------NCSQSGGAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDK 742
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Mouse
Match: Ddx11 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:MGI Symbol;Acc:MGI:2443590]) HSP 1 Score: 445.662 bits (1145), Expect = 4.999e-143 Identity = 277/872 (31.77%), Postives = 463/872 (53.10%), Query Frame = 1 Query: 76 QMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL--LVNQENQMNELI-----------KNKL----EIKQIEDDSQ--NDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVV-NYNSDEEVSND----IENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNA--------MLTVRNFIAAVYYS-LDASILVEKD--VG---LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEK-----QYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL ++ Q L+ KN L ++ D + + DW+ + Q KK + +L ++ + +K + + L ++ T + E EE+ V+ Y SDEE E+ E ITKIYYCSRTHSQL Q ++E+LK+ + + GSRQ LC+N V L S+ L+N++C+D+Q+ + + E K+++ C F ++E++E + I+ D+EQLV G ++ CP+YG + + A LV++PY +L+ A R A+ I ++ +VI DEAHNL DTI++++S ++ S L QL Y+ +Y +R +KNL+Y++Q+ + + + + + SLS +FLF++ ++ + L ++ +++KS L+ KL + +++ L G Q +K Q + + E G A ++ + F+AA+ + D ++V + VG L FL+++P + +V +CR++++ GGTMQP SDF +L + + R+ FSC HVI + ++ S N L FT++ R M++ TG I ++ + P GVV F SY + ++ W G+L+ + K ++ EPK++ Q E V+ ++K + + + S GA+L +V+G KMSEGINFSD+L R V++VG+PYP +SP LQEKM+Y+ + Q ++ NL MK +NQ+IGRAIRH+ DFA+I+LLD RYA + +++ LP+W++D V ++ + ++ F + Sbjct: 23 QKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRDFEKKKLQAEALLLAPGSGPPSSEKNSLLTSSSCQEPTDTPRPAGEPDWVTEFVQ-KKEERDLVERLREEQKHEEEETEALLRLSREMLDAGTGPE--QLEQLECGEEHLVLAEYESDEERRGSRVDEAEDDLEEEHITKIYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNLGSVQLMNDRCVDMQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDMEQLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHSTEVNGSQLCQAHSQLLQYMERYRKRLKAKNLMYIKQILYLLEKFVAVLGGNVKQNPTTQSLSQTGSELKSINDFLFQSQVDNINLFKVQRYLEKSMLSRKLFGFTECFGVVLPSLSDSQENRGLAGFQQFLKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPS-NQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQVEQVLMAYSK---------CIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYARPSILAK---------LPAWIRDRVEVKATFGPAFAAVRKFHR 872
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Mouse
Match: Ddx11 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:MGI Symbol;Acc:MGI:2443590]) HSP 1 Score: 409.838 bits (1052), Expect = 3.826e-129 Identity = 236/728 (32.42%), Postives = 396/728 (54.40%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEEVSND----IENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNA--------MLTVRNFIAAVYYS-LDASILVEKD--VG---LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEK-----QYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 E EE+ V+ Y SDEE E+ E ITKIYYCSRTHSQL Q ++E+LK+ + + GSRQ LC+N V L S+ L+N++C+D+Q+ + + E K+++ C F ++E++E + I+ D+EQLV G ++ CP+YG + + A LV++PY +L+ A R A+ I ++ +VI DEAHNL DTI++++S ++ S L QL Y+ +Y +R +KNL+Y++Q+ + + + + + SLS +FLF++ ++ + L ++ +++KS L+ KL + +++ L G Q +K Q + + E G A ++ + F+AA+ + D ++V + VG L FL+++P + +V +CR++++ GGTMQP SDF +L + + R+ FSC HVI + ++ S N L FT++ R M++ TG I ++ + P GVV F SY + ++ W G+L+ + K ++ EPK++ Q E V+ ++K + + + S GA+L +V+G KMSEGINFSD+L R V++VG+PYP +SP LQEKM+Y+ + Q ++ NL MK +NQ+IGRAIRH+ DFA+I+LLD RYA + +++ LP+W++D V ++ + ++ F + Sbjct: 190 ECGEEHLVLAEYESDEERRGSRVDEAEDDLEEEHITKIYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNLGSVQLMNDRCVDMQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDMEQLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHSTEVNGSQLCQAHSQLLQYMERYRKRLKAKNLMYIKQILYLLEKFVAVLGGNVKQNPTTQSLSQTGSELKSINDFLFQSQVDNINLFKVQRYLEKSMLSRKLFGFTECFGVVLPSLSDSQENRGLAGFQQFLKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPS-NQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQVEQVLMAYSK---------CIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYARPSILAK---------LPAWIRDRVEVKATFGPAFAAVRKFHR 898 HSP 2 Score: 62.003 bits (149), Expect = 3.259e-9 Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 76 QMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 23 QKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWL 62
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Mouse
Match: Rtel1 (regulator of telomere elongation helicase 1 [Source:MGI Symbol;Acc:MGI:2139369]) HSP 1 Score: 158.303 bits (399), Expect = 4.863e-39 Identity = 98/331 (29.61%), Postives = 164/331 (49.55%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQ-CRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSC---EHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSE-------SSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L++ P + ++++V Q R++I+ GT+ P S F+ + +I C H+I+ K Q+ V + V L ++ R +E + + G +I P+G+++FF SY VM+K +E WQ +G+ +++ LK +++EP+ VI + +Q AS SN GA AV K SEG++FSD R VI+ G+PYP P + KM ++++ G S + Y A + VNQAIGR IRH++D+ AI L D R+A + LPSW++ + + +N +I ++ FF+ Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEM---------QIPFPVCLENPHIID-KNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQ-------------VASPASN-GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFA---------YADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750 HSP 2 Score: 100.908 bits (250), Expect = 3.154e-21 Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLK 1119 I KI Y SRTHSQL QV++EL T+Y K+ C GSR+ LCI+ V + +S ++ C RK C F + + + + +++ +DIE LV G K CP+Y + +A ++ MPY +L+ +R A I++K +VIFDEAHN+ + S L + +GL+ Sbjct: 106 IPKIIYASRTHSQLTQVIRELRNTAYRPKV--CVLGSREQLCIHPEVKKQESNHMQISLC--------------------RKKVASRSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLE 277 HSP 3 Score: 62.7734 bits (151), Expect = 1.836e-9 Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP++PYP Q + M+++ ++K+ GI ESPTGTGK+L +LCS+L W Sbjct: 12 DFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Mouse
Match: Rtel1 (regulator of telomere elongation helicase 1 [Source:MGI Symbol;Acc:MGI:2139369]) HSP 1 Score: 157.918 bits (398), Expect = 4.914e-39 Identity = 98/331 (29.61%), Postives = 164/331 (49.55%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQ-CRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSC---EHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSE-------SSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L++ P + ++++V Q R++I+ GT+ P S F+ + +I C H+I+ K Q+ V + V L ++ R +E + + G +I P+G+++FF SY VM+K +E WQ +G+ +++ LK +++EP+ VI + +Q AS SN GA AV K SEG++FSD R VI+ G+PYP P + KM ++++ G S + Y A + VNQAIGR IRH++D+ AI L D R+A + LPSW++ + + +N +I ++ FF+ Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEM---------QIPFPVCLENPHIID-KNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQ-------------VASPASN-GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFA---------YADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750 HSP 2 Score: 100.908 bits (250), Expect = 3.088e-21 Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLK 1119 I KI Y SRTHSQL QV++EL T+Y K+ C GSR+ LCI+ V + +S ++ C RK C F + + + + +++ +DIE LV G K CP+Y + +A ++ MPY +L+ +R A I++K +VIFDEAHN+ + S L + +GL+ Sbjct: 106 IPKIIYASRTHSQLTQVIRELRNTAYRPKV--CVLGSREQLCIHPEVKKQESNHMQISLC--------------------RKKVASRSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLE 277 HSP 3 Score: 62.7734 bits (151), Expect = 1.818e-9 Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP++PYP Q + M+++ ++K+ GI ESPTGTGK+L +LCS+L W Sbjct: 12 DFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Mouse
Match: Rtel1 (regulator of telomere elongation helicase 1 [Source:MGI Symbol;Acc:MGI:2139369]) HSP 1 Score: 157.918 bits (398), Expect = 5.614e-39 Identity = 98/331 (29.61%), Postives = 164/331 (49.55%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQ-CRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSC---EHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSE-------SSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L++ P + ++++V Q R++I+ GT+ P S F+ + +I C H+I+ K Q+ V + V L ++ R +E + + G +I P+G+++FF SY VM+K +E WQ +G+ +++ LK +++EP+ VI + +Q AS SN GA AV K SEG++FSD R VI+ G+PYP P + KM ++++ G S + Y A + VNQAIGR IRH++D+ AI L D R+A + LPSW++ + + +N +I ++ FF+ Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEM---------QIPFPVCLENPHIID-KNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQ-------------VASPASN-GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFA---------YADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750 HSP 2 Score: 100.908 bits (250), Expect = 3.092e-21 Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLK 1119 I KI Y SRTHSQL QV++EL T+Y K+ C GSR+ LCI+ V + +S ++ C RK C F + + + + +++ +DIE LV G K CP+Y + +A ++ MPY +L+ +R A I++K +VIFDEAHN+ + S L + +GL+ Sbjct: 106 IPKIIYASRTHSQLTQVIRELRNTAYRPKV--CVLGSREQLCIHPEVKKQESNHMQISLC--------------------RKKVASRSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLE 277 HSP 3 Score: 62.7734 bits (151), Expect = 1.897e-9 Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP++PYP Q + M+++ ++K+ GI ESPTGTGK+L +LCS+L W Sbjct: 12 DFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
BLAST of ATP-dependent DNA helicase DDX11 vs. UniProt/SwissProt
Match: sp|F1R345|DDX11_DANRE (ATP-dependent DNA helicase DDX11 OS=Danio rerio OX=7955 GN=ddx11 PE=2 SV=1) HSP 1 Score: 474.167 bits (1219), Expect = 4.647e-153 Identity = 280/903 (31.01%), Postives = 471/903 (52.16%), Query Frame = 1 Query: 25 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNE---LIKNKLEIKQIEDDSQN----DFDWINAYAQSK-------------------KSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSND---------IENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQK-PIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI-DSYSSLSCV---------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRP------RQSSALFGGNQLIKENQMD---SEKATDE---LGNAMLTVRNFIAAVYYS-LDASILVEKDV-----GLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 M ++ F FP++PYP Q M LY +++RK+GIFESPTGTGKSLS++C +L WL +E + E L++ + + +++ + N + DW++ + Q K + +L + N L +K ++ + +S +E E V Y SD+E + ++ E +TKIYYCSRTHSQL Q + E+ K+ Y D + GSRQNLCIN V +L ++ ++NE+CL++QK K + +++ +K+ + A C F +E + + ++ D+EQL+ G ++ CP+Y + S A +V++PYQ++L+ + R AS I++KD IVI DEAHNL DTIS ++S ++ L QL Y +Y R +KNL+Y++Q+ + L+ + K+ + ++ SC +FLFK ++ + L ++ + +KS ++ KL E + R++ L Q ++ D + A ++ + + M+ +F+ A+ + D +++++ L FL+++ + I+ +CR++I+ GGTMQP +DF +L +A +RI FSC HVI + + ++ L L FTF+ R++ M++ TG + ++ + P GVV FF SY +I+ W+S G+L ++ K ++ EPK++ Q E V++ ++K ++ + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + +L MK VNQ+IGRAIRH+ D+A I+L D RYA R G L LP W++ S + + FF Sbjct: 1 MESKSGRFPFPFQPYPIQESFMEALYTALDQRKVGIFESPTGTGKSLSLICGALTWLRDYEEQRKQEAARLLEGQKDSDVVKEKNSNSGPPEPDWVSEFVQKKAERDMVNKLKDEELKRKKREERLEMIRHNAQLRYAMKRKADEDDEAVKLLQLSREGAEPETHSPEE--EGLIVAEYESDDEATPKSRLCDDDNDDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQKSPYGDAVRLVNLGSRQNLCINPEVVRLGNVQMMNERCLEMQKNKHEKRQKASDSESKRSRGLAKATCVFSRFENLMAMKDEVLVKVRDVEQLIQHGRETHTCPYYSTRMSIPAAQVVVLPYQSLLHASTRKASGIKLKDQIVIIDEAHNLMDTISAIHSAEISGGQLCRAHSQLSQYCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGQNPNTQSCQTGSELLTINDFLFKAQVDNINLFKVQKYFEKSMISRKLCGFAEKYEGSGINTHSSSKNKENRRTEGLGRFLQTLQSKPTDVSEQQMAVEDKPIMASPMMLAESFLFALTNANKDGRVVIQRQACVAQSSLKFLLLNAAVHFAQILQECRAVIIAGGTMQPVADFKEQLLFSAGVTEERILEFSCGHVIPPENILPIV-LCAGPSGQQLEFTFQTRDSPQMMEETGRVLSNLCNIVPGGVVCFFPSYEYEKRILGHWESTGILQRLQSKKKIFQEPKKASQVEQVLSEYSK---------CIQRCSNIGGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVAGKSPGKALVESLCMKAVNQSIGRAIRHRGDYACIVLCDHRYA----------RTGTLQKLPEWIRSSTHTHATFGPAFASARRFF 881
BLAST of ATP-dependent DNA helicase DDX11 vs. UniProt/SwissProt
Match: sp|Q6AXC6|DDX11_MOUSE (ATP-dependent DNA helicase DDX11 OS=Mus musculus OX=10090 GN=Ddx11 PE=1 SV=2) HSP 1 Score: 409.838 bits (1052), Expect = 2.676e-128 Identity = 236/728 (32.42%), Postives = 396/728 (54.40%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEEVSND----IENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNA--------MLTVRNFIAAVYYS-LDASILVEKD--VG---LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEK-----QYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 E EE+ V+ Y SDEE E+ E ITKIYYCSRTHSQL Q ++E+LK+ + + GSRQ LC+N V L S+ L+N++C+D+Q+ + + E K+++ C F ++E++E + I+ D+EQLV G ++ CP+YG + + A LV++PY +L+ A R A+ I ++ +VI DEAHNL DTI++++S ++ S L QL Y+ +Y +R +KNL+Y++Q+ + + + + + SLS +FLF++ ++ + L ++ +++KS L+ KL + +++ L G Q +K Q + + E G A ++ + F+AA+ + D ++V + VG L FL+++P + +V +CR++++ GGTMQP SDF +L + + R+ FSC HVI + ++ S N L FT++ R M++ TG I ++ + P GVV F SY + ++ W G+L+ + K ++ EPK++ Q E V+ ++K + + + S GA+L +V+G KMSEGINFSD+L R V++VG+PYP +SP LQEKM+Y+ + Q ++ NL MK +NQ+IGRAIRH+ DFA+I+LLD RYA + +++ LP+W++D V ++ + ++ F + Sbjct: 190 ECGEEHLVLAEYESDEERRGSRVDEAEDDLEEEHITKIYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNLGSVQLMNDRCVDMQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDMEQLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHSTEVNGSQLCQAHSQLLQYMERYRKRLKAKNLMYIKQILYLLEKFVAVLGGNVKQNPTTQSLSQTGSELKSINDFLFQSQVDNINLFKVQRYLEKSMLSRKLFGFTECFGVVLPSLSDSQENRGLAGFQQFLKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPS-NQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQVEQVLMAYSK---------CIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYARPSILAK---------LPAWIRDRVEVKATFGPAFAAVRKFHR 898 HSP 2 Score: 62.003 bits (149), Expect = 2.280e-8 Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 76 QMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 23 QKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWL 62
BLAST of ATP-dependent DNA helicase DDX11 vs. UniProt/SwissProt
Match: sp|Q21489|CHL1_CAEEL (ATP-dependent DNA helicase chl-1 OS=Caenorhabditis elegans OX=6239 GN=chl-1 PE=3 SV=2) HSP 1 Score: 397.897 bits (1021), Expect = 1.516e-124 Identity = 265/857 (30.92%), Postives = 451/857 (52.63%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEI--KQIEDDSQNDFD-WINAYAQSKKSK---LNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVS--------NDIENQENEG-SITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGAC---CSFKSYEKIEEVSKNIIRHPM-DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLI------KENQMDSEKATDELGNAMLTVRNFIAAVYYSL-DASILVEK---DVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 F+FP++PY Q+ LM E+ IE+RKIGIFESPTGTGKSLSVLCS++ WL + +L E+ K E D D W A + +++ + +Q + E+ + +DQ + ++ +D + + +E YN+DE+ +D++ +E + KI+Y SRTHSQL Q+ +EL KT + +I TC SR LC+N V +LK +LINEKC++L+K + + L K T C C F + +IE+V ++ + + ++ G S GCP++ +KS + LVL+PYQ +L+ R A IE+KDN+++ DEAHN+ +TIS + S ++ L L+ ++ Y Y + + NLLY++QLE++ S ++ F++ + ++ + + E+ L ++ +++K+ L K ++ ++ + L G +L+ E + + + + + ++++FI A+ D I+VEK + F++++P L ++V R+ I++GGTM+P L + + +D I FSC HVI+ Q + V T+ P + T++ R + +++ ++ PNGVVIF SY+ + ++ + G+L I++ K+V+ E +Q + + F+ +AK++KGA+LFAV+G KMSEGINF DEL R VI++G+PYP S L+E+M +++ Q + ++Y +L M VNQAIGRAIRH+ D+AA+ L D+RYA E+ RK L +W+ D ++ +I + +SFF+ Sbjct: 4 FSFPFQPYDIQLNLMREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTWLEAEELRISTDLSTRLGEVHTKITECDKITTADNWETAVREKMRAQDVETEILEQIQSRERLQSRIDQARRGMVEVSRKRKAPARDTDQFLEPQDEAAPSEEYNNDEKSEKQRDSDFFDDVDEEEEKPLKCLKIFYASRTHSQLEQLAEELAKTRFQPRIVTC--ASRGTLCVNEEVKKLKLNHLINEKCMELRKNGMSEKEKVQKLEKGTTKKTKTCATSCEFYNSTQIEDVVNGVLSNKLKSTLEVSKQGKLSNGCPYFATRKSVPQCQLVLLPYQVLLHDGTRKAWGIELKDNVIVLDEAHNVLNTISSLYSAEISTKSLTLALRLIREYNAHYKLKLLAHNLLYMKQLESLTSKMLIFLNSQ-SKEDVMTMAQLARNLNILEINLFKLAEYMEKTDLCKKFHGFYMRLQKEEIKKE--NEKPKLTGIQKLMAAKEAEPEPEAEPLPPPKPVPSPLFSLKSFIDALTNKCEDGRIIVEKSATEAKFRFMLLNPADRLSEVVTSARATILVGGTMEPAQLLVETLSRGS-IGADSIRRFSCCHVIDDSQLLAV-TVERTVDGKPFQLTYQTRGADTTLRSLATSIQALIPHIPNGVVIFVPSYDFLFNFQKKMKEFGILKRIEEKKAVFTESRQPTSD------------------VWDRFSRAAKTSKGAILFAVVGGKMSEGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDTQMPN-GGNLLYESLCMHAVNQAIGRAIRHRRDYAAVYLFDDRYA-----KESTRRK----LSTWIGDRTQVKLGFGEIIRKTRSFFE 825
BLAST of ATP-dependent DNA helicase DDX11 vs. UniProt/SwissProt
Match: sp|A8MPP1|D11L8_HUMAN (Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo sapiens OX=9606 GN=DDX11L8 PE=1 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 4.853e-123 Identity = 238/735 (32.38%), Postives = 393/735 (53.47%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEE--VSND-----IENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKP-IGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM-----------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-----SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 ES EE V+ Y SDEE V++ E+ E ITKIY+CSRTHSQL Q + E+ K+ + + GSRQNLC+N V L S+ LIN++C+D+Q+ K E K+R+ A C F ++E++ + + D+EQL+ G ++ CP+Y + + A LV++PYQ +L+ A R A+ I ++D +VI DEAHNL DTI+ ++SV++ S L QL Y+ +Y +R +KNL+YL+Q+ + + + I + SLS +FLF++ ++ + L ++ + +KS ++ KL V R+ L G Q ++ Q +S+ + + + ++ + F+AA+ + D +++ + L+ FL+++P + +V +CR++++ GGTMQP SDF +L A ++R+ FSC HVI V+ G++ N PL FTF+ R+ M+ G I ++ GVV FFSSY + ++ W+ G+L + K ++ EPK + Q E V+ +++ ++ A+L +V+G KMSEGINFSD L R V++VG+P+P RS LQEKM+Y+++ + + + NL MK VNQ+IGRAIRH+ DFA+I+LLD+RYA +++ LP+W++ SV ++ I+ ++ F + Sbjct: 191 ESGEEELVLAEYESDEEKKVASGHRVDEDEDDLEEEHITKIYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYRSRLAIPAAKLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGA----VFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIEGFLAALTTANQDGRVILSRQGSLSESTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNIPLVICSGIS--NQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFSSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSR---------CIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAK---------LPAWIRASVEVKATFGPAIAAVQKFHR 901 HSP 2 Score: 74.7146 bits (182), Expect = 2.372e-12 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 F FP+ PY Q M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
BLAST of ATP-dependent DNA helicase DDX11 vs. UniProt/SwissProt
Match: sp|Q92771|DDX12_HUMAN (Putative ATP-dependent RNA helicase DDX12 OS=Homo sapiens OX=9606 GN=DDX12P PE=5 SV=3) HSP 1 Score: 394.045 bits (1011), Expect = 8.029e-122 Identity = 237/737 (32.16%), Postives = 395/737 (53.60%), Query Frame = 1 Query: 451 ESNEENFVV-NYNSDEE--VSNDIENQENEGS---ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKP-IGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---DSYSSLSCV--------EFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQM-----------DSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMK-VMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYG-----SESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELK----SFF 2526 ES EE V+ Y SDEE V++ ++ E++ ITKIY+CSRTHSQL Q + E+ K+ + + GSRQNLC+N V L S+ LIN +C+D+Q+ K E K+R+ A C F ++E++ + + D+EQL+ G ++ CP+YG + + A LV++PYQ +L+ A R A+ I ++D +VI DEAHNL DT + ++SV++ S L QL Y+ +Y +R +KNL+YL+Q+ + + + I + SLS +FLF++ ++ + L ++ + +KS ++ KL V R+ L G Q ++ Q +S+ + + + ++ + F+AA+ + D +++ + L+ FL+++P + +V +CR++++ GGTMQP S+F +L A ++R+ FSC HVI + V+ GV+ N PL FTF+ R+ M+ G I ++ GVV FF SY + ++ W+ G+L + K ++ EPK + Q E V+ +++ ++ GA+L +V+G KMSEGINFSD L R V++VG+P+P RS LQEKM+Y+++ + + + NL MK VNQ+IGRAIRH+ DFA+I+LLD+RYA +++ LP+W++ V ++ I+ ++ +FF Sbjct: 210 ESGEEELVLAEYESDEEKKVASGVDEDEDDLEEEHITKIYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINNRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTTTSMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGMELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGA----VFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIEGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGVS--NQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSR---------CLQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAHPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAK---------LPAWIRARVEVKATFGPAIAAVQKVSPTFF 922 HSP 2 Score: 61.6178 bits (148), Expect = 3.179e-8 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1 Query: 85 LMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 M+ELY +E KIGIFESPTGTGKSLS++C +L+WL Sbjct: 45 FMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 81
BLAST of ATP-dependent DNA helicase DDX11 vs. TrEMBL
Match: A0A5N5P8A2 (Uncharacterized protein OS=Pangasianodon hypophthalmus OX=310915 GN=PHYPO_G00217630 PE=4 SV=1) HSP 1 Score: 499.204 bits (1284), Expect = 5.257e-160 Identity = 302/914 (33.04%), Postives = 480/914 (52.52%), Query Frame = 1 Query: 28 SNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIK------------------NKLEIKQIEDDSQ----NDFDWINAYAQSKKSKL---NLTDQ------NEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQ---------ESNEENFVV-NYNSDEEVS-------NDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI----------DSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVV---------VRPRQSSALFGGNQLIKENQMDSEKATDE---LGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 N F FP++PYP Q + M LYA +E+ K+GIFESPTGTGKSLS++C +L WL +E + E K + + +++ E S + DW++ + Q + + L D+ ED + Q+K +K S N+ T K S Q E +E+ VV +Y SDEEV+ +D ++ E +TKIYYCSRTHSQL Q + E+ K+ Y+ ++ GSRQNLCIN V +L S+ LIN++C++LQK ++ K+R+ A C+F YEK+ + ++ DIEQLV G + CP+Y + + A +V++PYQ++L+ A R AS I++KD IVI DEAHNL DTI+ ++S ++ + L QL Y +Y R +KNL+Y++Q+ + L+ + K+ L+ +FLF+ ++ + L ++ + +KS ++ KL E V R G Q ++ + + ++ + + M+ V +F+ A+ + D +++EK L FL+++ + ++ +CR++++ GGTMQP SDF +L +A P++RI FSC HVI + + ++ L L FTF+ R+ M++ TG + ++ + P GVV FF SY +I+ W+S GVL + K ++ EPK++ Q E V++ ++K ++ + S GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + NL MK VNQ+IGRAIRH+ D+A I+L D RYA R G L LP W++ S S +N + ++ FF Sbjct: 4 GNGVSRFPFPFKPYPIQERFMEALYAVLEQGKVGIFESPTGTGKSLSLICGALTWLKDCEEKKRQEAAKLLEHTVSARAVGGGGKDGDGITVQEEEKGSSAGADGELDWVSEFVQKRAEREMVNKLKDEEVKRKRREDRLEMIRHNAQLKYSMKRKNSENSETEKLLQCSKQDAGSEEGPNEDDEDGLVVADYESDEEVTPKNRLCDDDDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQKSPYSSTVSLVNLGSRQNLCINPEVARLGSVQLINDRCMELQKNKHDKQNKVDSEPKRRRGAIKATCAFSGYEKMMTMRDEVLASVRDIEQLVQHGRDTHTCPYYSTRLAIPAAQVVVLPYQSLLHAATRKASGIKLKDQIVIIDEAHNLTDTITALHSAEVNGAQLCRAHSQLSQYCDRYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGLNPVTQTTQSGTELLTINDFLFRAQIDNINLFKVQRYFEKSLISRKLFGFSEKYEGSGVSTHTSSMNKENHRTEGLGRFLQGLQSKATAPVEPQGSVEDRPIMASPMMLVESFLFALTSANKDGRVVMEKQACLAQSSVKFLMLNAAVHFAQVLQECRAVVIAGGTMQPVSDFKEQLLLSAGVPNERIVEFSCGHVIPPENILPII-LCTGPSGQELEFTFQTRDTPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYERRILGHWESNGVLQRLAAKKKIFQEPKKASQVEQVLSEYSK---------CIQRCINTGGSQSGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPLVDGRSPGKALIENLCMKAVNQSIGRAIRHRGDYACIVLCDRRYA----------RTGTLQKLPEWIRSSTSTHSNFGPAFASIRKFF 897
BLAST of ATP-dependent DNA helicase DDX11 vs. TrEMBL
Match: A0A3B4BQM8 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 OS=Pygocentrus nattereri OX=42514 PE=4 SV=1) HSP 1 Score: 490.73 bits (1262), Expect = 1.163e-156 Identity = 298/914 (32.60%), Postives = 477/914 (52.19%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL-------------LVNQ----------ENQMNELIKNKLEIKQIEDDSQNDFDWINAYAQSKKSKL---NLTDQ------NEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEEN----------FVVNYNSDEEVSNDIENQE--------NEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKID----SYSSLSCVE------FLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIK----------------ENQMDSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDV-----GLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 F FP++PYP Q + M LYA +E+RK+GIFESPTGTGKSLS++C +L WL L+ EN N + K+ E ++ + + DW++ + Q + + L D+ E+ + Q+K +K S N K S QE + E V +Y SDEEV+ N + E ITKIYYCSRTHSQL Q + E+ K+ Y ++ GSRQN+C+N V +L S+ LIN++C++LQK + K+R+ A C+F YEK+ + ++ DIEQL+ G ++ CP+Y + + A +V++PYQ++L+ A R AS I++KD IVI DEAHNL DT++ ++S ++ + L QL Y +Y R +KNL+Y++Q+ + L+ + K+ + S+ S E FLF+ ++ + L ++ + +KS ++ KL + E V SS++ NQ I+ Q + + + + M+ V +F+ A+ S D ++++K L FL+++ + +V +CR++I+ GGTMQP +DF +L +A +RI FSC HVI + + ++ L L FTF+ R+ M++ TG + ++ + P GVV FF SY +I+ W+S GVL + K V+ EPK++ Q E V++ +++ ++ +++ + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + NL MK VNQ+IGRAIRH+ D+A I+L D RY+ R G L LP W++ S ++ + ++ FF Sbjct: 10 FPFPFKPYPIQERFMEALYAALEQRKVGIFESPTGTGKSLSLICGALTWLRDFEEKKREEAATLLQHSERDRKGGGGENVCNGVQKSGQEEERGSSGATTEPDWVSEFVQKRAEREMVNKLKDEEMKRKRREERLEMIRHNAQLKYAMKRKSSEVNEVEKLLQLSKQELSSEEKSHEEEEEGLIVADYESDEEVTTKTRNCDDDDNDDDLEEEHITKIYYCSRTHSQLAQFVHEVQKSPYGSTVSLVNLGSRQNMCVNPDVARLGSLQLINDRCMELQKNKHDKQNKADLEPKRRRGVAKATCAFSGYEKLMAMRDEVLVKVRDIEQLLQHGRETHTCPYYSTRMAIPAAEVVVLPYQSLLHAATRKASGIKLKDQIVIIDEAHNLADTLTALHSAEVNGAQLCRAHSQLSQYCDRYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGLNPVTQSTQSGAELLTINDFLFRAQIDNINLFKVQKYFEKSMISRKLCGFVEKYEGKGVNT----HSSSVNKENQRIEGLGRFLQSLQNKPAAPPEQQGAVEDRPSMASPMMLVESFLFALTNSNKDGRVVMDKQACLAQSSLKFLMLNAAVHFAQVVQECRAVIIAGGTMQPVADFKEQLLLSAGVSEERISEFSCGHVIPPENILPIV-LCAGPSGQELEFTFQTRDTPRMMEETGRVLSNLCNVVPGGVVCFFPSYEYEKRILGHWESNGVLQRLAAKKKVFQEPKKASQVEQVLSEYSR---------CIQRCSSTGQGQSGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKNMPHVDGRSPGKTLVENLCMKAVNQSIGRAIRHRGDYACIVLCDRRYS----------RTGTLQKLPEWIRSSTHTHSSFGPAFASIRRFF 899
BLAST of ATP-dependent DNA helicase DDX11 vs. TrEMBL
Match: A0A3B3RCP9 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 OS=Paramormyrops kingsleyae OX=1676925 PE=4 SV=1) HSP 1 Score: 490.73 bits (1262), Expect = 1.660e-156 Identity = 295/925 (31.89%), Postives = 484/925 (52.32%), Query Frame = 1 Query: 22 IMSNQFYA--------FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQN-----------------DFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQ---------ESNEEN-------------FVVNYNSDEE------VSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQK-PIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKID----------SYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIE-TGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGN--------------AMLTVRNFIAAVYYS-LDASILVEKDV-----GLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 ++S QF+A F FPYEPY Q + M LY TI++ KIGIFESPTGTGKSLS++C +L WL ++E + E + LE + + DS + + +WI + Q KK++ L D+ ++ +K ++ + + + + ES EE+ V +Y SD++ + ++ E+ E +TKIYYCSRTHSQL Q + E+ K+ + +++ SRQNLCIN V +L S+ LIN++C+++Q+ GK ++ T+T K+R+ A C F +E + + + D+E +VV G ++ CP+YG + + A LV++PYQ +L+ A R AS I++KD +VI DEAHNL DTI+ + S +++ + L QL Y+ +Y R +KNL+Y++Q+ + L+ + K+D L+ FLF+ ++ + L ++ + +KS ++ KL + + TG V V +++ G + +K Q + T + M+ V F++A+ + D ++V++ L FL+++P + ++ +C+++I+ GGTMQP +DF +L +A +RI FSC HVI Q + + L L FTF+NR M++ TG + ++ + P G+V FF SY +++ W S GVL + K ++ EP+++ Q E V+ +++ +++ + + GA+LF+V+G KMSEGINFSDEL R VI+VG+PYP +SP LQEKM+Y++K G + + NL MK VNQ+IGRAIRH+ D+A I+LLD RY+ R G L LP W+++ +Q ++ FF Sbjct: 5 VLSLQFHAGMETTTLQFPFPYEPYSIQKQFMEALYTTIDEGKIGIFESPTGTGKSLSLICGALTWLRDHEEKKKQEAV-GLLEERDVTMDSSSTQPPQGHCSSPALSSSTEPNWIADFVQ-KKAERELVDKLKEEAIRKRKREERMELIRHNVQLQYALKHKSDQDEEARRLLRLSAESGEEDGKGAVLGDGEEELIVADYESDDDGKPKNSICDEEEDDLEEDHVTKIYYCSRTHSQLAQFVHEVQKSPFREEVRVVSLASRQNLCINEEVRRLGSVQLINDRCMEMQRNKHGKAEKSTDTEPKRRRREPKAVCPFSRHEALLGLRDETLVKVRDVEDMVVLGRETKACPYYGGRLAVPAAQLVVLPYQVLLHEAMRRASGIKLKDQVVIIDEAHNLMDTIACIYSSEVMGTQLCCAHSQLTQYMERYRNRLKAKNLMYVKQILFVLEGLVHVLGGKVDQNPHSQVTQAGTEMLTINNFLFRAQIDNINLFKVQRYFEKSLISRKLNGFVEKYQGTGVAVSVSKKENQRTEGLGRFLKSLQSGQQAHTVPIPGQKVAEEDKQSSVVCPMIQVEGFLSALTNANKDGRLVVQRQGTLAQDSLKFLLLNPAIHFAPVLKECKAVIIAGGTMQPVADFKEQLLLSAGVSEERISGFSCGHVI-PPQNILPIVLCSGPSGQELEFTFQNRETPQMMEETGRVLSNLCNVVPGGLVCFFPSYEYERRVLAHWNSTGVLGRLAARKKIFQEPRKASQVEQVLKEYSR---------CIQHCSQAGAVLSGALLFSVVGGKMSEGINFSDELGRCVIMVGMPYPNIKSPELQEKMAYLDKHMPHVGGQSPGKALVENLCMKAVNQSIGRAIRHRGDYACIVLLDRRYS----------RPGTLQKLPEWIRNRTQVQPTFGPAFGGIRKFF 907
BLAST of ATP-dependent DNA helicase DDX11 vs. TrEMBL
Match: A0A3B3RE12 (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 OS=Paramormyrops kingsleyae OX=1676925 PE=4 SV=1) HSP 1 Score: 485.337 bits (1248), Expect = 4.956e-155 Identity = 292/904 (32.30%), Postives = 470/904 (51.99%), Query Frame = 1 Query: 22 IMSNQFYA--------FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQN-----------------DFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQ---------ESNEEN-------------FVVNYNSDEE------VSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQK-PIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKID----------SYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 ++S QF+A F FPYEPY Q + M LY TI++ KIGIFESPTGTGKSLS++C +L WL ++E + E + LE + + DS + + +WI + Q KK++ L D+ ++ +K ++ + + + + ES EE+ V +Y SD++ + ++ E+ E +TKIYYCSRTHSQL Q + E+ K+ + +++ SRQNLCIN V +L S+ LIN++C+++Q+ GK ++ T+T K+R+ A C F +E + + + D+E +VV G ++ CP+YG + + A LV++PYQ +L+ A R AS I++KD +VI DEAHNL DTI+ + S +++ + L QL Y+ +Y R +KNL+Y++Q+ + L+ + K+D L+ FLF+ ++ + L ++ + +KS ++ KL + + V V + KENQ T+ LG F+ ++ A L FL+++P + ++ +C+++I+ GGTMQP +DF +L +A +RI FSC HVI Q + + L L FTF+NR M++ TG + ++ + P G+V FF SY +++ W S GVL + K ++ EP+++ Q E V+ +++ +++ + + GA+LF+V+G KMSEGINFSDEL R VI+VG+PYP +SP LQEKM+Y++K G + + NL MK VNQ+IGRAIRH+ D+A I+LLD RY+ R G L LP W+++ +Q ++ FF Sbjct: 5 VLSLQFHAGMETTTLQFPFPYEPYSIQKQFMEALYTTIDEGKIGIFESPTGTGKSLSLICGALTWLRDHEEKKKQEAV-GLLEERDVTMDSSSTQPPQGHCSSPALSSSTEPNWIADFVQ-KKAERELVDKLKEEAIRKRKREERMELIRHNVQLQYALKHKSDQDEEARRLLRLSAESGEEDGKGAVLGDGEEELIVADYESDDDGKPKNSICDEEEDDLEEDHVTKIYYCSRTHSQLAQFVHEVQKSPFREEVRVVSLASRQNLCINEEVRRLGSVQLINDRCMEMQRNKHGKAEKSTDTEPKRRRREPKAVCPFSRHEALLGLRDETLVKVRDVEDMVVLGRETKACPYYGGRLAVPAAQLVVLPYQVLLHEAMRRASGIKLKDQVVIIDEAHNLMDTIACIYSSEVMGTQLCCAHSQLTQYMERYRNRLKAKNLMYVKQILFVLEGLVHVLGGKVDQNPHSQVTQAGTEMLTINNFLFRAQIDNINLFKVQRYFEKSLISRKLNGFVEKYQGTGVAVSVSK------------KENQR-----TEGLG-------RFLKSLQSGQQAHTGTLAQDSLKFLLLNPAIHFAPVLKECKAVIIAGGTMQPVADFKEQLLLSAGVSEERISGFSCGHVI-PPQNILPIVLCSGPSGQELEFTFQNRETPQMMEETGRVLSNLCNVVPGGLVCFFPSYEYERRVLAHWNSTGVLGRLAARKKIFQEPRKASQVEQVLKEYSR---------CIQHCSQAGAVLSGALLFSVVGGKMSEGINFSDELGRCVIMVGMPYPNIKSPELQEKMAYLDKHMPHVGGQSPGKALVENLCMKAVNQSIGRAIRHRGDYACIVLLDRRYS----------RPGTLQKLPEWIRNRTQVQPTFGPAFGGIRKFF 862
BLAST of ATP-dependent DNA helicase DDX11 vs. TrEMBL
Match: A0A2D0QVB8 (probable ATP-dependent DNA helicase DDX11 isoform X1 OS=Ictalurus punctatus OX=7998 GN=ddx11 PE=4 SV=1) HSP 1 Score: 484.182 bits (1245), Expect = 4.133e-154 Identity = 295/909 (32.45%), Postives = 479/909 (52.70%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNE---LIKNKLEIKQI-------------EDDSQN------DFDWINAYAQSKKSKL---NLTDQ------NEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEEN----------FVVNYNSDEEVS--------NDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKID----SYSSLSCVE------FLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRP------RQSSALFGGNQLIKENQ------MDSEKATDELGNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 F FP++PYP Q + M LY +E+ K+GIFESPTGTGKSLS++C +L WL +E + E L+++ + + E++ N + DW++ + Q + + L D+ ED + Q+K +K S N+ T K +S +++ E+ V +Y SDEE + + ++ E +TKIYYCSRTHSQL Q + E+ K+ Y ++ GSRQNLCIN V +L S+ LIN++C++LQK ++ K+R+ A C+F YEK+ + ++ DIEQLV G + CP+Y + + A +V++PYQ++L+ A R AS I++KD IVI DEAHNL DTI+ ++S ++ + L QL Y +Y R +KNL+Y++Q+ + L+ + K+ + S+ S E FLF+ ++ + L ++ +++KS ++ KL E V R++ L Q ++ SE+ + + M+ V +F+ A+ + D +++EK L FL+++ + ++ +CR++++ GGTMQP SDF +L +A +RI FSC HVI + + ++ L L FTF+ R+ M++ TG + ++ + P GVV FF SY +I+ W+S GVL + K ++ EPK++ Q E V++ +++ ++ + + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + NL MK VNQ+IGRAIRH++D+A I+L D RYA R G L LP W++ S +N + ++ FF Sbjct: 10 FPFPFKPYPIQERFMEALYTVLEEGKVGIFESPTGTGKSLSLICGALTWLKDFEEKKRQEAEKLLEHTVSASAVGGGGKNGDGITVREEEKSNSAGVDGELDWVSEFVQKRAERELVNKLKDEEMKRKRREDRLEMIRHNAQLKYTMKRKNSENSETEKLLQFSKKDAGSEDGPDEDEEDGLVVADYESDEETTPKNRLCDEEEDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQKSPYNSTVSLVNLGSRQNLCINPEVARLGSVQLINDRCMELQKNKHDKQDKVDSEPKRRRGAVKATCAFSGYEKMMTMRDEVLASVRDIEQLVQHGRDTHTCPYYSTRLAIPAAQVVVLPYQSLLHAATRKASGIKLKDQIVIIDEAHNLGDTITALHSSEVNGAQLCRAHSQLSQYCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGLNPVTQSTQSGTELLTINDFLFRAQIDNINLFKVQRYLEKSLISRKLFGFSEKYEGSGVSTHTSSMNKENRRTEGLGRFLQGLQSKATAPVEYQGSEEDRPIMASPMMLVESFLFALSSANKDGRVVMEKQTCLAQSSVKFLMLNAAVHFAQVLQECRAVVIAGGTMQPVSDFKEQLLLSAGAHKERIAEFSCGHVIPPENILPII-LCTGPSGQELEFTFQTRDRPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYERRILGHWESNGVLQRLAAKKKIFQEPKKASQVERVLSEYSR---------CIQRCSNTGGGQSGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVDGRSPGKALIENLCMKAVNQSIGRAIRHRDDYACIVLCDRRYA----------RTGTLQKLPEWIRSSTRTHSNFGPAFAGIRKFF 898
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Cavefish
Match: ddx11 (DEAD/H-box helicase 11 [Source:NCBI gene;Acc:103040310]) HSP 1 Score: 473.396 bits (1217), Expect = 1.600e-153 Identity = 291/904 (32.19%), Postives = 468/904 (51.77%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNE----LIKNKLEIKQIEDDSQNDF--------------DWINAYAQSKKSKL---NLTDQ------NEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEEN----------FVVNYNSDEEVS-------NDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKID----------SYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDV------VVVRPRQSSALFGGNQLIKENQMDSEKAT------DELGNAMLTVRNFIAAVYYS-LDASILVEKDV-----GLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKL-GLPSWLKDSVSIQNNTNSLISELKSFF 2526 F FP++PY Q + M LYA +E+ K+GIFESPTGTGKSLS++C +L WL ++E + E L + ++E K D + D DW++ + Q + + L D+ E+ + Q+K +K + +N K S QE + E V +Y SD+E + D ++ E +TKIYYCSRTHSQL Q + E+ K+ Y ++ GSRQNLC+N V +L S+ LIN++C++LQK T+ K+R+ A C F YEK+ + ++ DIEQLV G + CP+Y + + A +V++PYQ +L+ A R AS I++KD IV+ DEAHNL DTI+ ++S ++ + L QL Y +Y R +KNL+Y++Q+ + L+ + K+ L+ +FLF+ ++ + L ++ + +KS ++ KL + E V V R + L Q ++ + + + + M+ V +F+ A+ S D ++++K L FL+++ + +V +CR++I+ GGTMQP +DF +L +A +RI FSC HVI + + ++ L L FTF+ R+ M++ TG + ++ + P GVV FF SY +I+ W+ G+L + K V+ EPK++ Q E V++ ++K ++ + + GA+LF+V+G KMSEGINFSD+L R +++VG+PYP +SP LQEKM+Y++K G + + NL MK VNQ+IGRAIRH+ D+A I+L D RY+ R G L LP W++ S ++ + ++ FF Sbjct: 10 FPFPFKPYTIQERFMESLYAALEQGKVGIFESPTGTGKSLSLICGALTWLRDHEEKKKEEAARLLQEKEVERKGDGDGGEKDCNGDKSGGSGAATEPDWVSDFVQKRAEREIVNKLKDEEIKRKRREERLEMIRHNAQLKYAMKRKTNEDNEAEKLLQLSKQELSSEEKSHEEEEEGLIVADYESDDEATPKPRICDEDDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQKSPYGSTVSLVNLGSRQNLCVNPDVTRLGSVQLINDRCMELQKNKHDKQSKTDLEPKRRRSIAKATCPFTGYEKMMAMRDEVLVKVRDIEQLVQHGRGTHTCPYYSTRLAIPAAQVVVLPYQTLLHAATRKASGIKLKDQIVVIDEAHNLTDTITALHSAEVNGAQLCRAHSQLSQYCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVSLNPVTQSTQPGTELLTINDFLFRAQIDNINLFKVQKYFEKSMISRKLCGFVEKYEGNGVNTHSNSVNKENRNTEGLGRFLQSLQNKPAAAAEQQAAVDDRPSMSSPMMLVESFLFALTNSNKDGRVVMDKQAYLSQSSLKFLMLNAAVHFAQVVQECRAVIIAGGTMQPVADFKEQLLLSAGLSEERIAEFSCGHVIPPENILPIV-LCAGPSGQGLEFTFQTRDTPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYEKRILGHWEKTGILQRLAAKKKVFQEPKKASQVEQVLSEYSK---------CIQRCSNTGGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKNMPHIDGRSPGKALIENLCMKAVNQSIGRAIRHRGDYACIVLCDRRYS----------RSGTLQKLPQWIRSSTHTHSSFGPAFASIRKFF 893
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Cavefish
Match: ercc2 (ERCC excision repair 2, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:103044920]) HSP 1 Score: 191.045 bits (484), Expect = 1.027e-50 Identity = 175/709 (24.68%), Postives = 310/709 (43.72%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK--------TSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPM-----DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEF-----VSRKIDSY--------------------SSLSCVEFL--FKTYLN-EMKLDRILN--------------FIDKSKL---AYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVS 2478 +TK+ YCSRT ++ +V++EL K T + SR+NLCI+ V+ L+ ++ KC L + A+ + C F YE+ + V + + P+ +++ L G K G CP+Y + S A++V+ Y +L+P A L SK K ++V+FDEAHN+ + D VN + L T + L++ I QR + LR+ + L+E V+R+ D Y ++ V FL F YL +++ ++ ID+ L A +LR+ +R +E D+ P + F L+ + + T+ N + L F +DP +K + + +S+++ GT+ P D R+ R T + + A+ + + +G + V + FE R + A+I+ G++ L + + P+G+V FF+SY M+ I+ W +G+L I++ K ++IE + + + + + ++ +GA+L +V K+SEGI+F R VI+ G+PY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRAIR K D+ +I D+RYA K +GK LP W+++ +S Sbjct: 43 VTKLIYCSRTVPEIEKVVEELRKLMEFYTKETGEKNNFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLTA--------SYIRAQHHSNPSQPVCRF--YEEFDAVGRQV---PIPSGIYNLDDLKDFGRKKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQTNVDTLQNTI----QRIKETDAAKLREE---YRRLVEGLKEANVARETDIYLSNPVLPDEVLQEAIPGSIRTAEHFVGFLKRFLEYLKARLRIHHVVQESSPQFLKDIYEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSPITLISHFA--TLVSTYSKGFTIIIEPFEDKTPTIANPV------------------LHFSCMDPSIAIKPVFERFQSVVITSGTLSPL-DIYPRILDF------RPVTMASFTMTLARTCLCPLIVGRGNDQVAMSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYMENIVASWYEQGILENIQRNKLIFIETPDAAETSMA----------------LEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMIFADKRYARADK-------RGK--LPRWIQEHIS 678
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Cavefish
Match: ercc2 (ERCC excision repair 2, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:103044920]) HSP 1 Score: 191.43 bits (485), Expect = 1.458e-50 Identity = 175/709 (24.68%), Postives = 310/709 (43.72%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK--------TSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPM-----DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEF-----VSRKIDSY--------------------SSLSCVEFL--FKTYLN-EMKLDRILN--------------FIDKSKL---AYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVS 2478 +TK+ YCSRT ++ +V++EL K T + SR+NLCI+ V+ L+ ++ KC L + A+ + C F YE+ + V + + P+ +++ L G K G CP+Y + S A++V+ Y +L+P A L SK K ++V+FDEAHN+ + D VN + L T + L++ I QR + LR+ + L+E V+R+ D Y ++ V FL F YL +++ ++ ID+ L A +LR+ +R +E D+ P + F L+ + + T+ N + L F +DP +K + + +S+++ GT+ P D R+ R T + + A+ + + +G + V + FE R + A+I+ G++ L + + P+G+V FF+SY M+ I+ W +G+L I++ K ++IE + + + + + ++ +GA+L +V K+SEGI+F R VI+ G+PY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRAIR K D+ +I D+RYA K +GK LP W+++ +S Sbjct: 67 VTKLIYCSRTVPEIEKVVEELRKLMEFYTKETGEKNNFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLTA--------SYIRAQHHSNPSQPVCRF--YEEFDAVGRQV---PIPSGIYNLDDLKDFGRKKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQTNVDTLQNTI----QRIKETDAAKLREE---YRRLVEGLKEANVARETDIYLSNPVLPDEVLQEAIPGSIRTAEHFVGFLKRFLEYLKARLRIHHVVQESSPQFLKDIYEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSPITLISHFA--TLVSTYSKGFTIIIEPFEDKTPTIANPV------------------LHFSCMDPSIAIKPVFERFQSVVITSGTLSPL-DIYPRILDF------RPVTMASFTMTLARTCLCPLIVGRGNDQVAMSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYMENIVASWYEQGILENIQRNKLIFIETPDAAETSMA----------------LEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMIFADKRYARADK-------RGK--LPRWIQEHIS 702
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Cavefish
Match: ercc2 (ERCC excision repair 2, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:103044920]) HSP 1 Score: 142.895 bits (359), Expect = 6.210e-35 Identity = 134/551 (24.32%), Postives = 239/551 (43.38%), Query Frame = 1 Query: 973 MLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEF-----VSRKIDSY--------------------SSLSCVEFL--FKTYLN-EMKLDRILN--------------FIDKSKL---AYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVS 2478 +L+P A L SK K ++V+FDEAHN+ + D VN + L T + L++ I QR + LR+ + L+E V+R+ D Y ++ V FL F YL +++ ++ ID+ L A +LR+ +R +E D+ P + F L+ + + T+ N + L F +DP +K + + +S+++ GT+ P D R+ R T + + A+ + + +G + V + FE R + A+I+ G++ L + + P+G+V FF+SY M+ I+ W +G+L I++ K ++IE + + + + + ++ +GA+L +V K+SEGI+F R VI+ G+PY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRAIR K D+ +I D+RYA K +GK LP W+++ +S Sbjct: 117 LLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQTNVDTLQNTI----QRIKETDAAKLREE---YRRLVEGLKEANVARETDIYLSNPVLPDEVLQEAIPGSIRTAEHFVGFLKRFLEYLKARLRIHHVVQESSPQFLKDIYEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSPITLISHFA--TLVSTYSKGFTIIIEPFEDKTPTIANPV------------------LHFSCMDPSIAIKPVFERFQSVVITSGTLSPL-DIYPRILDF------RPVTMASFTMTLARTCLCPLIVGRGNDQVAMSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYMENIVASWYEQGILENIQRNKLIFIETPDAAETSMA----------------LEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMIFADKRYARADK-------RGK--LPRWIQEHIS 607
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Cavefish
Match: rtel1 (regulator of telomere elongation helicase 1 [Source:NCBI gene;Acc:103025871]) HSP 1 Score: 141.354 bits (355), Expect = 6.637e-34 Identity = 96/330 (29.09%), Postives = 160/330 (48.48%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQ-CRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCE--HVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRI-------MYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 L++ PG +++++ Q R +I+ GT+ P S F+ C S E HVI K Q+ V + V L F+ R + + G+ +++ P+G+++FF SY V+DK +E W++ G I+ +K +++EP+ VI F + KSN G+ FAV K SEG++F+D R VII G+P+P P + KM Y+++ ++SS + Y A + VNQAIGR IRH+ D+ AI L D R+ + ++ LPSW++ V + +N +++ + FF+ Sbjct: 452 LSYWCFCPGFSMQELLRQEVRCIILTSGTLSPLSSFT--------CEMQIPFPVSLENPHVIQ-KDQIFVSIVDKGPDGVQLSTAFDKRFVPENMASLGNTIVNLSRVVPHGLLVFFPSYPVLDKTLEFWRANGHADRIENMKPMFVEPRGKGTFTEVIDGFYDK-------------VNDPKSNGGS-FFAVCRGKASEGLDFADTYGRGVIITGLPFPPRMDPRVVLKMQYLDEMCRNKSSGMKYLSGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKNTDVRAQ---------LPSWVRPYVRM-DNFGTVVRDAAQFFR 748 HSP 2 Score: 110.153 bits (274), Expect = 3.831e-24 Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRK 1143 I KI Y SRTHSQL QV+ EL T+Y K+ C GSR+ LCIN + + +S ++ C + KV+T +C + + ++ + K+I+ +D+E LV G K CP+Y + A L+ MPY +L+P +R A IE+K +VIFDEAHN+ + S L L + + + +R+ Sbjct: 106 IPKIIYASRTHSQLTQVVSELKNTAYRPKV--CVLGSREQLCINQEIMKQESNHIKVHMC-------------------RAKVSTRSCLFYNNVDE-KSTDKDIMNSILDVEDLVKTGKKERVCPYYLSRSLKQHADLIFMPYNYLLDPKSRRAHNIELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLTSAIDAVDKLLRE 285 HSP 3 Score: 58.151 bits (139), Expect = 4.368e-8 Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP+ PYP Q M+++ ++ + G+ ESPTGTGK+L +LC++L W Sbjct: 12 DFPFTPYPCQTDYMNKVIECLQSKVNGVLESPTGTGKTLCLLCATLGW 59
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Sea Lamprey
Match: ercc2 (excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]) HSP 1 Score: 165.622 bits (418), Expect = 8.644e-43 Identity = 182/729 (24.97%), Postives = 308/729 (42.25%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK--------TSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGAC--CSFKSYEKIEEVSKNIIRHP--MDIEQLVVAGLKSGGCPFYGIKKS-FNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLK---------------QLKSYIRKYLQRFSSKNLL---------------YLRQLETIFSN------LIEFVSR---------KIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAY---KLRNSMRNIETGDVVVVRPRQSSALFG--------GNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMI-VIGGTMQPFSDFS----NRLFKNAECPSDRIH-TFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQN 2487 + K+ YCSRT ++ +V++E+ K T K SR+NLCI+ V+ L+ ++ +C L T + + R + G+ CSF YE + + P ++ L G + CP++ + S A++V+ Y +L+P A L SK K ++V+FDEAHN+ + D VN + L T ++ +LK R+ ++ ++ L+ E + N + F+ R ++ S S FL +TY DRI ID+ L + +LR+ +R +E D+ P F G LI E E T + N +L R +S + + V +VN R+ + V GT + F N F C + + TFS N MK++ G + V + FE R + A+I+ G++ L + P+GVV FF+SY+ M+ I+ W +G+L I++ K ++IE + E +A + + + ++ +GAVL +V K+SEGI+F R VI+ GIPY T+S IL+ ++ ++ Y + + + AM+ Q +GRAIR K D+ ++ D+RY+ K +GK LP W+++ ++ N Sbjct: 33 VQKLVYCSRTVPEIEKVIEEMKKLVAYYEKHTKEPMKFLALSLSSRKNLCIHPEVSALRFGKEVDGRCHSL----------TASYVRNRHSSDGSVPVCSF--YEDFNTNGREVPMPPGIYSLDDLKEYGRQKHWCPYFLARYSQIMHANVVVYSYHYLLDPKIADLVSKEMSKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCSTNIETLQTTIQKIRETDATKLKEEYRRLVEGLRDASVARETDVHLANPVLPDEVLQDAEAVPGNSRNAEHFVSFLKRFVEYLKSRLRVTHVLSESTPAFLKETY------DRIC--IDRKPLRFCSERLRSLLRTLEIADIADFSPLTLVCNFATLVSTYTNGFTLIIE---PFEDKTPTILNPILRFRR------HSKNQKLSVH------------------MVNDTRASVNVPCGTRALLNRFPLDKVNTRFTALRCITGVLALTFS----PNRGLAMKIVARG--NDQVTMSSKFETREDIAVIRNYGNLLLEMTCVVPDGVVCFFTSYHYMESIVAAWYEQGILENIQRNKLIFIETQDG--AETSVA--------------LEKYHEACENGRGAVLLSVARGKVSEGIDFVHHYGRAVIMFGIPYVYTQSRILKARLEFLRDHYQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGVMVFADKRYSRADK-------RGK--LPRWIQEHITDAN 682
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009331.1 (pep scaffold:Pmarinus_7.0:GL478127:7852:42501:1 gene:ENSPMAG00000008437.1 transcript:ENSPMAT00000009331.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 152.14 bits (383), Expect = 9.304e-39 Identity = 86/276 (31.16%), Postives = 147/276 (53.26%), Query Frame = 1 Query: 1738 HVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQ-SLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIM-----------YHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 HVI+ K Q+ V + +V L + NR+ A + + G +++ PNG+++FF SY VMD ++ W+++G+ S+I+++K +++EPKQ L E + + K + + SA A FAV K+SEG++F+D R VII G+P+P P ++ KM ++++ S+ + Y A + VNQAIGR IRH++D+ AIIL D R++ + +++ LPSW++ SV +++ EL FF+ Sbjct: 9 HVID-KHQVWVGIVEKGPDSVQLNSAYRNRSCPAYMSSLGKTIVNLARIIPNGLLVFFPSYTVMDMCLQHWKNEGLSSKIEEIKPMFVEPKQKGLFTEAINGFYDK----------INDPRCSA-----AAFFAVCRGKVSEGLDFADANGRAVIITGLPFPPQMDPWIKLKMQFLDEMKAKRSTEMQCEFVGLSGQEWYTQQASRAVNQAIGRVIRHRHDYGAIILCDHRFSSASAVAQ---------LPSWMRPSVKAYPEFGAVVRELSQFFR 259
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Sea Lamprey
Match: RTEL1-TNFRSF6B (RTEL1-TNFRSF6B readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:44095]) HSP 1 Score: 100.138 bits (248), Expect = 6.189e-23 Identity = 64/203 (31.53%), Postives = 99/203 (48.77%), Query Frame = 1 Query: 532 GSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIR 1140 G+I KI Y SRTHSQL+Q + EL SY ++ C GSR+ LCI+ V + +S + C R TT C + Y +EE + I MD+E+LV G K CP++ ++ + A ++ MPY +L+ +R A I++ IVIFDEAHN+ + S L L + + + +++ Sbjct: 95 GNIPKIIYSSRTHSQLSQAMNELKNASYKPRV--CVLGSREQLCIHPDVVKQESNHAKVHLC--------------------RAKTTSRSCFY--YNNVEEKKTDFIAGIMDVEELVKKGKKHQVCPYFMTQELKHDADIIFMPYNYLLDTKSRRAHSIDLSGKIVIFDEAHNVERLCENAASFDLTPFELASSIDAVSHFLQ 273 HSP 2 Score: 56.225 bits (134), Expect = 1.390e-8 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQ 273 +FP+ PY Q M+++ + K GI ESPTGTGK+L +LC++L W +E+Q+ + ++ + + DD + Sbjct: 12 SFPFTPYKCQEDYMAQVIDCLNLGKNGILESPTGTGKTLCLLCATLAW----REHQVGQHVRQREQQNSWGDDGR 82
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Sea Lamprey
Match: RTEL1-TNFRSF6B (RTEL1-TNFRSF6B readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:44095]) HSP 1 Score: 94.3597 bits (233), Expect = 3.805e-21 Identity = 72/233 (30.90%), Postives = 112/233 (48.07%), Query Frame = 1 Query: 532 GSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKS--INLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIE-----EVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHL------VTGLKQLKSYIRKYLQRFSSKNLLYLRQL 1191 G+I KI Y SRTHSQL+Q + EL SY ++ C GSR+ LCI+ V + +S + N + + L R TT C + Y +E S+ + MD+E+LV G K CP++ ++ + A ++ MPY +L+ +R A I++ IVIFDEAHN+ + S L L V+ Q+KS + L S +++ ++QL Sbjct: 96 GNIPKIIYSSRTHSQLSQAMNELKNASYKPRV--CVLGSREQLCIHPDVVKQESNHAKVWNNRLVHL----------------CRAKTTSRSCFY--YNNVEVYCSLRASQRLAGRIMDVEELVKKGKKHQVCPYFMTQELKHDADIIFMPYNYLLDTKSRRAHSIDLSGKIVIFDEAHNVERLCENAASFDLTPFELASSIDAVSHFLQMKSRTQTVLHDVSIEDVANIKQL 308 HSP 2 Score: 55.0694 bits (131), Expect = 3.142e-8 Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNK 240 +FP+ PY Q M+++ + K GI ESPTGTGK+L +LC++L W +E+Q+ + ++ + Sbjct: 12 SFPFTPYKCQEDYMAQVIDCLNLGKNGILESPTGTGKTLCLLCATLAW----REHQVGQHVRQR 71
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Sea Lamprey
Match: RTEL1-TNFRSF6B (RTEL1-TNFRSF6B readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:44095]) HSP 1 Score: 94.3597 bits (233), Expect = 5.708e-21 Identity = 62/205 (30.24%), Postives = 102/205 (49.76%), Query Frame = 1 Query: 532 GSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHP--MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIR 1140 G+I KI Y SRTHSQL+Q + EL SY ++ C GSR+ LCI+ V + +S + C + K T+ +C + + E E + ++ P MD+E+LV G K CP++ ++ + A ++ MPY +L+ +R A I++ IVIFDEAHN+ + S L L + + + +++ Sbjct: 95 GNIPKIIYSSRTHSQLSQAMNELKNASYKPRV--CVLGSREQLCIHPDVVKQESNHAKVHLC-------------------RAKTTSRSCFYYNNVEG--ECAVHLTPTPGIMDVEELVKKGKKHQVCPYFMTQELKHDADIIFMPYNYLLDTKSRRAHSIDLSGKIVIFDEAHNVERLCENAASFDLTPFELASSIDAVSHFLQ 276 HSP 2 Score: 56.225 bits (134), Expect = 1.395e-8 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQ 273 +FP+ PY Q M+++ + K GI ESPTGTGK+L +LC++L W +E+Q+ + ++ + + DD + Sbjct: 12 SFPFTPYKCQEDYMAQVIDCLNLGKNGILESPTGTGKTLCLLCATLAW----REHQVGQHVRQREQQNSWGDDGR 82
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Yeast
Match: CHL1 (Probable DNA helicase; involved in sister-chromatid cohesion and genome integrity and interstrand cross-link repair; interacts with ECO1 and CTF18; mutants are defective in silencing, rDNA recombination, aging and the heat shock response; FANCJ-like helicase family member; mutations in the human homolog, DDX11/ChLR1, cause Warsaw breakage syndrome [Source:SGD;Acc:S000005929]) HSP 1 Score: 297.36 bits (760), Expect = 1.948e-88 Identity = 237/917 (25.85%), Postives = 413/917 (45.04%), Query Frame = 1 Query: 43 AFNFPYEPYPQQMKLMSELYATI-EKRKIGIFESPTGTGKSLSVLCSSLNW------------------------------------------------LLVNQENQMNELIKNKLEIKQIE-----DDSQNDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSNDIENQE-----NEGSITKIYYCSRTHSQLNQVLQEL----LKTSYADKIAT-----CCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPM------DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYS-SLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVY-YSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVP-LRFTFENRNNEAMI-KATGDIFLSIFSFCP--NGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVE---------KQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF 2526 F PY+PY Q++LM +Y + E +KI I ESPTGTGK+LS++C+++ W LL + E +NE+ N KQ++ D + ++ + +K +L E+ + + +S D +Y E N + + D +VS D N + N+ + KIYY SRT+SQL Q +L +S+ DK+ S++ LCIN V + K++ IN+ C DL+ + C +++ + + M DIE LV G G CP+Y +++ A +V +PYQ +L+ + R + +I ++++IVI DEAHNL +TI+ + S ++ L L K + +Y K+ R + N + L +L ++ LI+F+ + + + + ++ + + ++L +I SK+AYK+ + ++ +SS IKE S + + V F+ + + + EK+ + +++++P K + I+NQ + +++ GGTM+P S+F + L E PS+ I T SC HVI + +T N P L FTFE R + +++ F+ + P G+V FF SY + +I+ W+ + + ++ ++ E K I+ ++ S +G++L A++G K+SEGINF D+L R V++VG+P+P S L K ++ ++ S +++ N+ MK VNQ++GRAIRH ND+A I LLD RY + RK L W++DS++ ++ T+ +IS + FF Sbjct: 9 TFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFTRMETNIKTNEDDSENLSDDEPDWVIDTYRKSVLQEKVDLLNDYEKHLNEI--NTTSCKQLKTMCDLDKEHGRYKSVDPLRKKRKGARHLDVSLEEQDFIPRPYESDSENNDTSKSTRGGRISDKDYKLSELNSQIITLLDKIDGKVSRDPNNGDRFDVTNQNPV-KIYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWKTLEAINDACADLRH------------------SKEGCIFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQISLEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLLMTLIQFIVKNFKKIGQEIDPNDMFTGSNIDTLNIHKLLRYIKVSKIAYKIDTYNQ--------ALKEEESSK---NENPIKETHKKSVSSQP----LLFKVSQFLYCLTNLTSEGQFFFEKNYSIKYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLL--PEVPSEDITTLSCNHVIPKENLQTYIT------NQPELEFTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNVRKIFYEAKDGDD-------------------ILSGYSDSVAEGRGSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLAAKIMKSGGTEEEASRATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRY------NRPNFRK---KLSRWVQDSINSEHTTHQVISSTRKFF 853
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Yeast
Match: RAD3 (5' to 3' DNA helicase; involved in nucleotide excision repair and transcription; subunit of RNA polII initiation factor TFIIH and of Nucleotide Excision Repair Factor 3 (NEF3); homolog of human XPD protein; mutant has aneuploidy tolerance; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000000973]) HSP 1 Score: 161.384 bits (407), Expect = 1.587e-41 Identity = 168/728 (23.08%), Postives = 314/728 (43.13%), Query Frame = 1 Query: 544 KIYYCSRTHSQLNQVLQEL--------LKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNP--AARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLK------------------QLKSYIRKYLQRFSSKNLLYLRQ--------------LETIFSNL------IEFVSRKIDSYSS----LSCVEFLFKTYLNEMKLDRILNFIDKSKLAY---KLRNSMRNIETGDVVVVRPRQSSALFG--------GNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQN---NTNSLISELKSFFQ 2529 KI YCSRT S++ + L EL + Y + SR+NLC++ V++ + +++EKC + Q L + + C ++ IE V + + E+L+ + CP++ +++ + ++++ Y +L+P A R+++++ KD+IVIFDEAHN+ + + S+ L L + +L+ K +Q S ++L ++ E I N+ + F+ R I+ + L + K++L +K L FI++ L + +L +R +E +V + A F G LI E E+ NA V N I + LDASI + K + + S+I+ GT+ P + L N + + + + AK+ M + S V + FE RN+ ++++ G + + P+G+V+FF SY M+ I+ WQ+ G+L E+ K K + +E + E +A+ T + + + +GA+L +V K+SEGI+F + R V+++GIP+ T S IL+ ++ ++ + Y + + + AM+ Q +GR +R K+D+ ++L D R++ + + LP W+ +S + +T+ IS K F + Sbjct: 68 KIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMT-----NGQAKRKLEEDPEANVELCEYHENLYNIE-VEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQ---LTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPY--------EIENA--AVPNPIMR-FTCLDASIAI-----------------KPVFERFSSVIITSGTISPLDMYPRML--NFKTVLQKSYAMTL-----AKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDA--QETSLALET--------------YRKACSNGRGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFD-AMRHAAQCLGRVLRGKDDYGVMVLADRRFS-----------RKRSQLPKWIAQGLSDADLNLSTDMAISNTKQFLR 722
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Nematostella
Match: EDO39388 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SA32]) HSP 1 Score: 221.476 bits (563), Expect = 3.683e-60 Identity = 196/716 (27.37%), Postives = 312/716 (43.58%), Query Frame = 1 Query: 490 DEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKN--IIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLL---LSHLVTGLKQLKSYIR------KYLQRFSSKNLLYLRQLETIFSNL------IEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDK--SKLAYKLRNSMRNIE--TGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTV-----RNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQ-CRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTA--SAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRI-------MYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFFQ 2529 D+ SN N E I KI Y SRTHSQL+Q +QEL T Y +++ GSR+ LCIN+ V + S + C R T C F Y +E N +DIE LV G K CP+Y ++ A ++ MPY +L+P +R A +++ +IV+FDEAHNL + S L ++ V + Y+ + + + L+ L+ +FS L I+ S S+ E L + DR+L ++K + LA LR ++ T + +V + GN Q++ + + G + T + +++Y+ S + + + + PG +KD+++Q S+I+ GT+ P + F+ AE HVI K QM V + L ++E R+ + G+ + PNG+++FF SY VM+K +E WQ+ G+ + + + K ++ EP+ G + M +F A + S GA FAV K+SEG++FSD R V+I G+P+P ++ KMS++++ + S I Y A + VNQA+GR IRH+ DF AI+L D R+ + E LPSW+K V I + EL FF+ Sbjct: 99 DDSCSNKGSNFE----IPKIIYASRTHSQLSQAVQELKATVYRPRVS--IIGSREQLCINSDVLKQDSNSAKVHMC--------------------RAKVTARTCHF--YNNLEGNKSNPAFTTEILDIEDLVRLGQKHKVCPYYMARELKTSADIIFMPYNYLLDPKSRKAHNLDISGSIVVFDEAHNLEKVCEETVSFDLTSFDIASCVEDVLLCMEYVANAEDDPDIGEGGTDIDPEDLKVLKALFSKLEEEIDQIQLPSDGSKSFPGDFMFELLGNVGIKPNTKDRVLETLEKINTLLANGLRGKHFALQKFTDALQIVFNKTDKGPKSGNSFKVHVQVEPDSKKKQKGLDIWTSGSKLSKKGTSSLYF---YSFFMRTMIMIHYWCFSPGHAMKDLMSQGVSSVILTSGTLSPLNSFT------AEMQIPFPIRLENPHVIE-KHQMMVAVVTKAPDGATLNSSYEFRSTPGYMTGLGNTIANFARTIPNGLLVFFPSYPVMNKCLEHWQNTGIWARLSQYKPMFAEPR----------------GKGDFVQTMEDFYAKINDPSLNGATFFAVCRGKVSEGLDFSDINGRAVVITGLPFPPMMDAKVKLKMSFLDEMSRKDKSAIKGLTGREWYRQQASRAVNQAVGRVIRHRQDFGAILLCDVRFTYPDALRE---------LPSWVKPQVKIFKEFGHVQRELIQFFR 751 HSP 2 Score: 55.4546 bits (132), Expect = 9.891e-8 Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 1 Query: 49 NFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP++PY Q+ M ++ ++ RK + ESPTGTGK+L +LC++L W Sbjct: 10 DFPFKPYDCQVAYMEKVIECLQTRKNAVLESPTGTGKTLCLLCATLAW 57
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Nematostella
Match: EDO46754 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNX6]) HSP 1 Score: 134.035 bits (336), Expect = 2.262e-32 Identity = 81/300 (27.00%), Postives = 153/300 (51.00%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKD 2469 L F +D +K + ++ +S+++ GT+ P + L R T + + A+ + M + S V + FE R + A+I+ G++ + + P+G+V FF+SY M+ ++ W +G++S I+K K ++IE + E +A + N+ + ++ +GA+L +V K+SEGI+F R VI+ GIPY T+S IL+ ++ Y+ +Q+ + + + AM+ Q +GRAIR K D+ ++ D+R++ + K +GK LP W+++ Sbjct: 409 LHFSCMDASIAVKPVFDRFQSVVITSGTLSPIDMYPKIL-------DFRPVTMATFTMTLARTCLCPMIVSRGSDQVAMTTKFEMREDLAVIRNYGNLLTEMSAVVPDGIVCFFTSYLYMESVVSLWHDQGIISNIQKNKLLFIETTDA--AETSLA--------------LHNYQKACENGRGAILLSVARGKVSEGIDFDHHYGRAVIMFGIPYVYTQSRILKARLEYLREQFNIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGIMVFADKRFSKVDK-------RGK--LPKWIQE 675 HSP 2 Score: 78.5666 bits (192), Expect = 5.623e-15 Identity = 56/195 (28.72%), Postives = 98/195 (50.26%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK-TSYADK-------IATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHP--MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKL 1089 +TK+ YCSRT ++ +V++EL K T Y + I SR+NLCI+ V + ++ KCL + + K ++ ++ C+F YE + + ++ P +++ L G K G CP++ +++ A++++ Y ML+P A L SK K +V+FDEAHN+ + D SV + Sbjct: 43 LTKLIYCSRTVPEIEKVMEELKKLTEYYESETGEKPNILALALSSRKNLCIHPEVAGEREGKKVDGKCLSMTASFVRL--------KHKEDSSVPVCNF--YEDFDSLGRDEKMPPGSYNLDDLRQFGRKKGWCPYFLARRAIYHANVIVYSYHYMLDPKIADLVSKELDKKAVVVFDEAHNIDNVCIDSMSVTI 227
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Medaka
Match: ddx11 (DEAD/H-box helicase 11 [Source:NCBI gene;Acc:101163814]) HSP 1 Score: 465.307 bits (1196), Expect = 1.960e-150 Identity = 291/901 (32.30%), Postives = 468/901 (51.94%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQEN---------QMNELIKNKLEIKQIEDDSQNDFDWINAYAQSKK-----SKLNLTD----QNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQ--------ESNEENFVVNYNSDEEVSN---------DIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI----DSYSSLSCVE------FLFKTYLNEMKLDRILNFIDKSKLAYKLR-------NSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDEL-----------GNAMLTVRNFIAAVYYS-LDASILVEKDVGLT-----FLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMK-VMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQY----GSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF 2526 F FPY+PY Q + M LY +++ K+GIFESPTGTGKSLS++C +L+WL ++E Q E + + S + DWI + Q K SKL D + E+ + Q+K +K + FK S + + +EE+ V Y SD++ + + E++ E +TKIYYCSRTHSQL Q + E+ K+ ++ I+ GSRQNLCIN V +L SI IN++C+++QK Q E AK+++ + C F ++++ ++ DIEQL+ G CP+Y + + A LV++PYQ +L+ A R A+ +++K +VI DEAHNL DT+S ++S +L S L QL Y +Y R +KNL+Y++Q+ L+ + K+ S ++ + E FLFK ++ + ++ + +KS ++ KL S + T + + R++ L + +K NQ + +L + M+ + F A+ S D +LV + L+ FL+++P + +++ +CRS+I+ GGTMQP SDF L +A +RI F+C HVI + + VM G + + L FTF++R+ M+ TG I +I + P GVV FF SY + +I+ W++ G L+ + K ++ EPK+ Q E+V++ F++ ++ + GA+LF+V+G KMSEGINFSD+L R V++VG+PYP +SP LQEKMSY++K G + + NL MK VNQ+IGRAIRH+ D+++++L D RY+ +S+ LP+W++ S + L+ FF Sbjct: 8 FPFPYQPYDIQEQFMQALYRALDQSKVGIFESPTGTGKSLSLICGALSWLRDHEEKTIQEAAALLQEGEAALSTSAAQSSSTSSSAEPDWITDFVQKKAERDLVSKLKEEDLKRKKREERLEMIRNNAQLKYALKRKSHEDEEAFKLLQLSKEDQAEAPEDQEDEEHIVAEYESDDDSKSRSRLLGRDDEEEDELVEEHVTKIYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLGSRQNLCINEEVRRLGSIQRINDRCMEMQKN-KHEKQRPEDGAKRKRGPAKSVCPFNKASALQQMRDEVLGTVYDIEQLIKVGKDIHSCPYYATRLAIPPAKLVVLPYQMVLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIHSSELNGSQLCRAYSQLTQYADRYKSRLKAKNLMYIKQILFAIERLVRVLGGKVGQNPQSQNTQAGTEMHTINNFLFKAEIDNINWFKLQRYFEKSMISRKLSGFVEKYAGSGVTLHTQNTLNKENRRTEGLLNYLKTLKSNQNSASVPQPDLQESAEAEKVLSASPMMQIEGFFMALTNSNTDGRVLVHRQGTLSESSIKFLLLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKEELLLSAGVGQERIVEFACGHVIPPENILPIVMCSGPSGQE--LDFTFQSRDLPCMMDETGRILSNICNVVPGGVVCFFPSYEYLRRIMCHWEASGALTRLSNKKKIFQEPKKPNQVEHVLSEFSR---------CIQRCAQESSGLTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDKHLPHSQGKSPGQALVENLCMKAVNQSIGRAIRHRGDYSSVVLCDRRYSRPATLSK---------LPAWIRSRTSTYATFGPAFAALRKFF 887
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Medaka
Match: ercc2 (ERCC excision repair 2, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:101163020]) HSP 1 Score: 192.2 bits (487), Expect = 7.730e-51 Identity = 173/699 (24.75%), Postives = 321/699 (45.92%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK--------TSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPM-----DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEF-----VSRKIDSYSSLSCV--EFLFKTYLNEMK--------LDRILNFI-DKSKLAYKLRNS----MRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGN-----AMLTVRNFIAAV-YYSLDASILVEK---------DVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVS 2478 +TK+ YCSRT ++ +V++EL K T + SR+NLCI+ V+ L+ ++ KC L + A++ C F YE+ + V + + P+ +++ L G + G CP+Y + S A++V+ Y +L+P A L SK K ++V+FDEAHN+ + D VN + L + ++ L+ I Q+ + LR+ + L+E V+R+ D Y + + E L + ++ L R L ++ + ++ + ++ S +++I + +P + A ++ S T E+ + A+ + NF V YSL +I++E + L F +DP +K + + +S+++ GT+ P + L R T + + A+ + + +G + V L FE R + A+I+ G++ L + + P+G+V FF+SY M+ I+ W +G+L I++ K ++IE + + + + + + ++ +GA+L +V K+SEGI+F R VI+ G+PY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRAIR K D+ +I D+RYA K +GK LP W+++ +S Sbjct: 67 VTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNNFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLTASYIR--------AQRHSNPDQPVCRF--YEEFDAVGRQV---PLPAGIYNLDDLKDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQSNVETLQHTI----QKIKDTDAAKLREE---YRRLVEGLKEANVARETDVYLANPVLPDEILQEAVPGSIRTAEHFLGFLRRFLEYLKSRLRVHHVVQESAPQFLKDIFEKVCIDRKPLRFCA----------ERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSLGFTIIIEPFDDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKIL-------DFRPVTMASFTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMA----------------LEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMIFADKRYARADK-------RGK--LPRWIQEHIS 702
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Medaka
Match: ercc2 (ERCC excision repair 2, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:101163020]) HSP 1 Score: 191.43 bits (485), Expect = 1.213e-50 Identity = 173/699 (24.75%), Postives = 321/699 (45.92%), Query Frame = 1 Query: 538 ITKIYYCSRTHSQLNQVLQELLK--------TSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPM-----DIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPA-ARLASKIEVKDNIVIFDEAHNLPDTISD---VNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEF-----VSRKIDSYSSLSCV--EFLFKTYLNEMK--------LDRILNFI-DKSKLAYKLRNS----MRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGN-----AMLTVRNFIAAV-YYSLDASILVEK---------DVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVS 2478 +TK+ YCSRT ++ +V++EL K T + SR+NLCI+ V+ L+ ++ KC L + A++ C F YE+ + V + + P+ +++ L G + G CP+Y + S A++V+ Y +L+P A L SK K ++V+FDEAHN+ + D VN + L + ++ L+ I Q+ + LR+ + L+E V+R+ D Y + + E L + ++ L R L ++ + ++ + ++ S +++I + +P + A ++ S T E+ + A+ + NF V YSL +I++E + L F +DP +K + + +S+++ GT+ P + L R T + + A+ + + +G + V L FE R + A+I+ G++ L + + P+G+V FF+SY M+ I+ W +G+L I++ K ++IE + + + + + + ++ +GA+L +V K+SEGI+F R VI+ G+PY T+S IL+ ++ Y+ Q+ + + + AM+ Q +GRAIR K D+ +I D+RYA K +GK LP W+++ +S Sbjct: 67 VTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNNFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLTA--------SYIRAQRHSNPDQPVCRF--YEEFDAVGRQV---PLPAGIYNLDDLKDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQSNVETLQHTI----QKIKDTDAAKLREE---YRRLVEGLKEANVARETDVYLANPVLPDEILQEAVPGSIRTAEHFLGFLRRFLEYLKSRLRVHHVVQESAPQFLKDIFEKVCIDRKPLRFCA----------ERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSLGFTIIIEPFDDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKIL-------DFRPVTMASFTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMA----------------LEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMIFADKRYARADK-------RGK--LPRWIQEHIS 702
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Medaka
Match: brip1 (BRCA1 interacting protein C-terminal helicase 1 [Source:NCBI gene;Acc:101173242]) HSP 1 Score: 146.747 bits (369), Expect = 1.783e-35 Identity = 96/325 (29.54%), Postives = 154/325 (47.38%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCE----HVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVE---KQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSF 2523 L+F ++P D+ RS+++ GT+ P FS+ L FS + HVIN K Q+ V T+G + L TF++ A GD+ L I GV+ F SY ++DK+ + W + G+ ++++ K+V EP+ + + L + GA+L AV K+SEG++F+D+ AR V+ +GIP+P + ++ KM Y + K G Y A + +NQA+GR IRHKND+ A+IL+D+RY N K GL W++ V ++ + LK+F Sbjct: 609 LSFWCLNPAVAFSDLSGSVRSIVLTSGTLSPMGSFSSELGVK----------FSIQLEANHVIN-KSQVWVGTVGAGPQGKKLCATFQHTETYAFQDEVGDLLLHICKVIAKGVLCFLPSYKLLDKLRDRWSNTGLWEKLEQQKTVITEPRGGAKGD-----------FDELLQTYYDAIKCCDERDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGHRWYEIQAYRALNQALGRCIRHKNDWGALILVDDRYG-------NNPNKYITGLSKWVRQLVQHHYTFSNAMQSLKAF 904 HSP 2 Score: 81.2629 bits (199), Expect = 3.688e-15 Identity = 57/219 (26.03%), Postives = 106/219 (48.40%), Query Frame = 1 Query: 520 QENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDL-QKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNL 1173 ++++ I KI++ +RTH Q+ Q+ EL +T Y+ + SR + C+N V + N NE+C DL + GK+ + + K R + ++ V + + D+E LV + C +Y ++ A ++ PY +L+P R + +I++ I++ DEAHN+ D + S L S L T ++L S ++ ++R + L Sbjct: 253 KDDKKRIPKIFFGTRTHKQITQIAHELKRTVYSS-VHMTILSSRDHTCVNPEV--VPHFNR-NERCKDLLEAKNGKSCRFYHGVQKMR-----------DHHTLQRV--HGLHEAWDVEDLVTVAKRLRSCSYYAARELMQGASIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCARESTSFTLDESSLKTCREELDSMVKNNIRRSQHEPL 454 HSP 3 Score: 50.447 bits (119), Expect = 8.900e-6 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP + YP Q+ +M+ + + + + ESPTG+GKSL++LCS+L W Sbjct: 15 IHFPCKAYPSQLSMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSTLAW 63
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Medaka
Match: brip1 (BRCA1 interacting protein C-terminal helicase 1 [Source:NCBI gene;Acc:101173242]) HSP 1 Score: 146.747 bits (369), Expect = 1.796e-35 Identity = 97/328 (29.57%), Postives = 160/328 (48.78%), Query Frame = 1 Query: 1570 LTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCE----HVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAK---SNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVE---KQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSF 2523 L+F ++P D+ RS+++ GT+ P FS+ L FS + HVIN K Q+ V T+G + L TF++ A GD+ L I GV+ F SY ++DK+ + W + G+ ++++ K+V EP+ + + F + +++ + + K GA+L AV K+SEG++F+D+ AR V+ +GIP+P + ++ KM Y + K G Y A + +NQA+GR IRHKND+ A+IL+D+RY N K GL W++ V ++ + LK+F Sbjct: 609 LSFWCLNPAVAFSDLSGSVRSIVLTSGTLSPMGSFSSELGVK----------FSIQLEANHVIN-KSQVWVGTVGAGPQGKKLCATFQHTETYAFQDEVGDLLLHICKVIAKGVLCFLPSYKLLDKLRDRWSNTGLWEKLEQQKTVITEPRGGAKGD-----FDE---------LLQTYYDAIKCCDERDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGHRWYEIQAYRALNQALGRCIRHKNDWGALILVDDRYG-------NNPNKYITGLSKWVRQLVQHHYTFSNAMQSLKAF 904 HSP 2 Score: 80.8777 bits (198), Expect = 3.923e-15 Identity = 57/219 (26.03%), Postives = 106/219 (48.40%), Query Frame = 1 Query: 520 QENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDL-QKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNL 1173 ++++ I KI++ +RTH Q+ Q+ EL +T Y+ + SR + C+N V + N NE+C DL + GK+ + + K R + ++ V + + D+E LV + C +Y ++ A ++ PY +L+P R + +I++ I++ DEAHN+ D + S L S L T ++L S ++ ++R + L Sbjct: 253 KDDKKRIPKIFFGTRTHKQITQIAHELKRTVYSS-VHMTILSSRDHTCVNPEV--VPHFNR-NERCKDLLEAKNGKSCRFYHGVQKMR-----------DHHTLQRV--HGLHEAWDVEDLVTVAKRLRSCSYYAARELMQGASIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCARESTSFTLDESSLKTCREELDSMVKNNIRRSQHEPL 454 HSP 3 Score: 50.447 bits (119), Expect = 8.725e-6 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 1 Query: 46 FNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNW 192 +FP + YP Q+ +M+ + + + + ESPTG+GKSL++LCS+L W Sbjct: 15 IHFPCKAYPSQLSMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSTLAW 63
BLAST of ATP-dependent DNA helicase DDX11 vs. Planmine SMEST
Match: SMESG000025070.1 (SMESG000025070.1) HSP 1 Score: 1608.96 bits (4165), Expect = 0.000e+0 Identity = 811/834 (97.24%), Postives = 815/834 (97.72%), Query Frame = 1 Query: 25 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF 2526 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWI+AYAQSKKSKLNLTDQNEDLEKKKIILDQIKLIKLKKESINNTTFKDCNYS+QESNEENFVVNYNSDEEVSNDIENQE EGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGL QLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPS+RIHTFSCEHVINAKQQMKVMTLGV+SKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIE KQSLQNEN IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF Sbjct: 1 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWISAYAQSKKSKLNLTDQNEDLEKKKIILDQIKLIKLKKESINNTTFKDCNYSHQESNEENFVVNYNSDEEVSNDIENQETEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLNQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSNRIHTFSCEHVINAKQQMKVMTLGVDSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEQKQSLQNEN----------------IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF 818
BLAST of ATP-dependent DNA helicase DDX11 vs. Planmine SMEST
Match: SMESG000025070.1 (SMESG000025070.1) HSP 1 Score: 1570.44 bits (4065), Expect = 0.000e+0 Identity = 793/816 (97.18%), Postives = 797/816 (97.67%), Query Frame = 1 Query: 79 MKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF 2526 MKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWI+AYAQSKKSKLNLTDQNEDLEKKKIILDQIKLIKLKKESINNTTFKDCNYS+QESNEENFVVNYNSDEEVSNDIENQE EGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGL QLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPS+RIHTFSCEHVINAKQQMKVMTLGV+SKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIE KQSLQNEN IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF Sbjct: 1 MKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWISAYAQSKKSKLNLTDQNEDLEKKKIILDQIKLIKLKKESINNTTFKDCNYSHQESNEENFVVNYNSDEEVSNDIENQETEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLNQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSNRIHTFSCEHVINAKQQMKVMTLGVDSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEQKQSLQNEN----------------IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSYVEKQYGSESSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDERYADITKISENELRKGKLGLPSWLKDSVSIQNNTNSLISELKSFF 800
BLAST of ATP-dependent DNA helicase DDX11 vs. Planmine SMEST
Match: SMESG000025070.1 (SMESG000025070.1) HSP 1 Score: 1219.14 bits (3153), Expect = 0.000e+0 Identity = 617/629 (98.09%), Postives = 622/629 (98.89%), Query Frame = 1 Query: 25 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWINAYAQSKKSKLNLTDQNEXXXXXXXXXXXXXXXXXXXXSINNTTFKDCNYSNQESNEENFVVNYNSDEEVSNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFF 1911 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWI+AYAQSKKSKLNLTDQNEDLEKKKIILDQIKLIKLKKESINNTTFKDCNYS+QESNEENFVVNYNSDEEVSNDIENQE EGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGL QLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPS+RIHTFSCEHVINAKQQMKVMTLGV+SKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCP I + Sbjct: 1 MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWLLVNQENQMNELIKNKLEIKQIEDDSQNDFDWISAYAQSKKSKLNLTDQNEDLEKKKIILDQIKLIKLKKESINNTTFKDCNYSHQESNEENFVVNYNSDEEVSNDIENQETEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHPMDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPDTISDVNSVKLLLSHLVTGLNQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKIDSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMRNIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATDELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSNRIHTFSCEHVINAKQQMKVMTLGVDSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPKHFYIIW 629
BLAST of ATP-dependent DNA helicase DDX11 vs. Planmine SMEST
Match: SMESG000018012.1 (SMESG000018012.1) HSP 1 Score: 201.445 bits (511), Expect = 2.008e-54 Identity = 184/673 (27.34%), Postives = 305/673 (45.32%), Query Frame = 1 Query: 502 SNDIENQENEGSITKIYYCSRTHSQLNQVLQELLKTSYADKIATCCFGSRQNLCINATVNQLKSINLINEKCLDLQKPIGKTDQITETLAKKRKVTTGACCSFKSYEKIEEVSKNIIRHP---MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPD----------TISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---------DSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMR-NIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATD--------------ELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSY---VEKQYGSE--SSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDER 2394 S + E +EN + KI++ +RTH Q+ QV++EL K++Y++ + G R C+N V K I+ + C DL K +G C +K + HP DIE + + K CP++ K A +V PY +LNP R + + +++NI+I DEAHN+ D ++ D++ +K+LL H+ ++K + +LL + LE + +IE +S K+ ++ S V+ L L+ L+ I NF ++ LA KLRN +R N E D P L ++ + MDS+K E N + +I+ D ++ + L ++PG K I + RS+I+ GT+ P F L C I F HV+ ++ + ++G ++ F + + G + L PNG++IF SS+ +++ ++ W + G+++EI+K KS++IEP+Q+ + I + K GA+L AV K SEG++F+DE ARLVI VGIPYP P + KM+Y +K + + S Y+ A + +NQA+GR IRH+ D+ A+I++D R Sbjct: 71 SRNDECKENAKQV-KIFFGTRTHKQIGQVIRELKKSAYSNTRMSILSG-RNLSCLNQEVLMSKEID---QNCKDLCKKMG--------------------CIYKIDNQ---------PHPETTWDIESISMKLKKVKICPYFQFKSWMKSADIVFCPYNYILNPFIRKSMGVNLENNIIILDEAHNIEDICREGASMSISLKDIDYLKMLLPHI----------LKKSGKEDCQHDLLTM--LEKM-HEVIELLSSKLFYKDEDVLKKTWDLESFVQLLKNCQLD---LENIKNF--ENHLA-KLRNEIRVNEEITDSTSEIPSSFMQLIDSFIMLVKLMMDSDKTKQNDFSIVITEGEKYAEPINEKVASGEWISCKKRKAD---VLNNNFVLNIWCMNPGIVFKQISDISRSIILTSGTLSPVVSFEKEL----NCKFSAI--FQAGHVVQPEKTF-LASIGNGPSGNAMKAVFSTTSKLSFQDELGQMLLKCSEVVPNGILIFLSSFALIELFMQRWTNTGLINEIRKHKSIFIEPRQTSEMNECIDAYFKH------------------VKDGALLLAVFRGKASEGVDFADEAARLVITVGIPYPSIADPKVVLKMNYNTNKKKHFDDQLLSGNEWYNIQAFRALNQALGRCIRHREDWGAMIMIDSR 662 HSP 2 Score: 59.6918 bits (143), Expect = 8.894e-9 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 52 FPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLCSSLNWL 195 FP EPYPQQ+ +M + +I K + + E PTG+GK++++LCS+L WL Sbjct: 13 FPIEPYPQQLYMMRRIINSINKSENCLMELPTGSGKTIALLCSTLGWL 60
BLAST of ATP-dependent DNA helicase DDX11 vs. Planmine SMEST
Match: SMESG000018012.1 (SMESG000018012.1) HSP 1 Score: 181.8 bits (460), Expect = 1.610e-48 Identity = 154/555 (27.75%), Postives = 255/555 (45.95%), Query Frame = 1 Query: 856 HP---MDIEQLVVAGLKSGGCPFYGIKKSFNKAHLVLMPYQNMLNPAARLASKIEVKDNIVIFDEAHNLPD----------TISDVNSVKLLLSHLVTGLKQLKSYIRKYLQRFSSKNLLYLRQLETIFSNLIEFVSRKI---------DSYSSLSCVEFLFKTYLNEMKLDRILNFIDKSKLAYKLRNSMR-NIETGDVVVVRPRQSSALFGGNQLIKENQMDSEKATD--------------ELGNAMLTVRNFIAAVYYSLDASILVEKDVGLTFLVVDPGKYLKDIVNQCRSMIVIGGTMQPFSDFSNRLFKNAECPSDRIHTFSCEHVINAKQQMKVMTLGVNSKNVPLRFTFENRNNEAMIKATGDIFLSIFSFCPNGVVIFFSSYNVMDKIIEEWQSKGVLSEIKKLKSVYIEPKQSLQNENVIAIFTKQ*GLIRRL*IMRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSPILQEKMSY---VEKQYGSE--SSRIMYHNLAMKPVNQAIGRAIRHKNDFAAIILLDER 2394 HP DIE + + K CP++ K A +V PY +LNP R + + +++NI+I DEAHN+ D ++ D++ +K+LL H+ ++K + +LL + LE + +IE +S K+ ++ S V+ L L+ L+ I NF ++ LA KLRN +R N E D P L ++ + MDS+K E N + +I+ D ++ + L ++PG K I + RS+I+ GT+ P F L C I F HV+ ++ + ++G ++ F + + G + L PNG++IF SS+ +++ ++ W + G+++EI+K KS++IEP+Q+ + I + K GA+L AV K SEG++F+DE ARLVI VGIPYP P + KM+Y +K + + S Y+ A + +NQA+GR IRH+ D+ A+I++D R Sbjct: 12 HPETTWDIESISMKLKKVKICPYFQFKSWMKSADIVFCPYNYILNPFIRKSMGVNLENNIIILDEAHNIEDICREGASMSISLKDIDYLKMLLPHI----------LKKSGKEDCQHDLLTM--LEKM-HEVIELLSSKLFYKDEDVLKKTWDLESFVQLLKNCQLD---LENIKNF--ENHLA-KLRNEIRVNEEITDSTSEIPSSFMQLIDSFIMLVKLMMDSDKTKQNDFSIVITEGEKYAEPINEKVASGEWISCKKRKAD---VLNNNFVLNIWCMNPGIVFKQISDISRSIILTSGTLSPVVSFEKEL----NCKFSAI--FQAGHVVQPEKTF-LASIGNGPSGNAMKAVFSTTSKLSFQDELGQMLLKCSEVVPNGILIFLSSFALIELFMQRWTNTGLINEIRKHKSIFIEPRQTSEMNECIDAYFKH------------------VKDGALLLAVFRGKASEGVDFADEAARLVITVGIPYPSIADPKVVLKMNYNTNKKKHFDDQLLSGNEWYNIQAFRALNQALGRCIRHREDWGAMIMIDSR 519 The following BLAST results are available for this feature:
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of ATP-dependent DNA helicase DDX11 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP-dependent DNA helicase DDX11 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30014925 ID=SMED30014925|Name=ATP-dependent DNA helicase DDX11|organism=Schmidtea mediterranea sexual|type=transcript|length=2530bpback to top protein sequence of SMED30014925-orf-1 >SMED30014925-orf-1 ID=SMED30014925-orf-1|Name=SMED30014925-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=149bp MRNFTASAKSNKGAVLFAVIGAKMSEGINFSDELARLVIIVGIPYPQTRSback to top protein sequence of SMED30014925-orf-2 >SMED30014925-orf-2 ID=SMED30014925-orf-2|Name=SMED30014925-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=678bp MSNQFYAFNFPYEPYPQQMKLMSELYATIEKRKIGIFESPTGTGKSLSVLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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