Poly(U)-specific endoribonuclease-C

Overview
NamePoly(U)-specific endoribonuclease-C
Smed IDSMED30014765
Length (bp)1002
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Poly(U)-specific endoribonuclease-C (SMED30014765) t-SNE clustered cells

Violin plots show distribution of expression levels for Poly(U)-specific endoribonuclease-C (SMED30014765) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Poly(U)-specific endoribonuclease-C (SMED30014765) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Poly(U)-specific endoribonuclease-C (SMED30014765) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30014765

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
prepharyngeal regionSMED30014765h1SMcG0001233 SmedASXL_009429SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30014765h1SMcG0001233 SmedASXL_009429SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30014765h1SMcG0001233 dd_Smed_v6_9109_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Category 4 cellSMED30014765h1SMcG0001233 dd_Smed_v4_9109_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Human
Match: ENDOU (endonuclease, poly(U) specific [Source:HGNC Symbol;Acc:HGNC:14369])

HSP 1 Score: 166.392 bits (420), Expect = 4.783e-48
Identity = 109/312 (34.94%), Postives = 159/312 (50.96%), Query Frame = 2 
Query:   35 HNIHTN-------NCCXXXXXXXXXXXXMH----VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTG--TRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR-DSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL--------MHIRKGSHINTSYII 904
            H  H N       NCC   +S     E  H    + K+++Q++  +++ AD N+    +D  LN Q  ++   TR   D     LF+  NE K+FSKPTY  F +LL+NY+      E+ + QEL E + FL  I+ T VMK L  FL  HQ           +L  +WF +Y RG    DS GFEHVF GE+K  ++ G HNWI+ YL+EK+G +DY      G  +    P V+ +QF W DG  K +GS+F+G+SPEFE A ++   +          +GGY + +         +     +I T+YI+
Sbjct:   39 HQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRADTNK-AQKEDIVLNSQNCISPSETRNQVDRCPKPLFTYVNE-KLFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELYSFL-HHQNRYGSEQEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWD--SYPDVLAMQFNW-DGYYKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTYTWDKSTYGNGKKYIATAYIV 344
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Human
Match: ENDOU (endonuclease, poly(U) specific [Source:HGNC Symbol;Acc:HGNC:14369])

HSP 1 Score: 166.392 bits (420), Expect = 6.594e-48
Identity = 109/312 (34.94%), Postives = 159/312 (50.96%), Query Frame = 2 
Query:   35 HNIHTN-------NCCXXXXXXXXXXXXMH----VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTG--TRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR-DSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL--------MHIRKGSHINTSYII 904
            H  H N       NCC   +S     E  H    + K+++Q++  +++ AD N+    +D  LN Q  ++   TR   D     LF+  NE K+FSKPTY  F +LL+NY+      E+ + QEL E + FL  I+ T VMK L  FL  HQ           +L  +WF +Y RG    DS GFEHVF GE+K  ++ G HNWI+ YL+EK+G +DY      G  +    P V+ +QF W DG  K +GS+F+G+SPEFE A ++   +          +GGY + +         +     +I T+YI+
Sbjct:   61 HQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRADTNK-AQKEDIVLNSQNCISPSETRNQVDRCPKPLFTYVNE-KLFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELYSFL-HHQNRYGSEQEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWD--SYPDVLAMQFNW-DGYYKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTYTWDKSTYGNGKKYIATAYIV 366
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Human
Match: ENDOU (endonuclease, poly(U) specific [Source:HGNC Symbol;Acc:HGNC:14369])

HSP 1 Score: 166.777 bits (421), Expect = 1.479e-47
Identity = 109/312 (34.94%), Postives = 159/312 (50.96%), Query Frame = 2 
Query:   35 HNIHTN-------NCCXXXXXXXXXXXXMH----VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTG--TRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR-DSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL--------MHIRKGSHINTSYII 904
            H  H N       NCC   +S     E  H    + K+++Q++  +++ AD N+    +D  LN Q  ++   TR   D     LF+  NE K+FSKPTY  F +LL+NY+      E+ + QEL E + FL  I+ T VMK L  FL  HQ           +L  +WF +Y RG    DS GFEHVF GE+K  ++ G HNWI+ YL+EK+G +DY      G  +    P V+ +QF W DG  K +GS+F+G+SPEFE A ++   +          +GGY + +         +     +I T+YI+
Sbjct:  102 HQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRADTNK-AQKEDIVLNSQNCISPSETRNQVDRCPKPLFTYVNE-KLFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELYSFL-HHQNRYGSEQEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWD--SYPDVLAMQFNW-DGYYKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTYTWDKSTYGNGKKYIATAYIV 407
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Celegans
Match: endu-1 (Poly(U)-specific endoribonuclease homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21109])

HSP 1 Score: 132.88 bits (333), Expect = 4.158e-36
Identity = 88/240 (36.67%), Postives = 126/240 (52.50%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNV--FLEAILNTEVMKILQR-FLIKHQLIRPGPSSLKQELNKIWFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQE--KKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHL 805
            V   +L  +  +L   D NR  P Q   LN QG  T TR   D AQA LFS  +   +F KP+Y+L+ +L+DN+  +    E    Q  ++N V  FL+ +L +  M+ L   F  K   I   P   +  + ++WF  Y R  G  D+ GFEHVF+GE K  +I G+HNW++ Y+ E  +  N DYKGF             +  ++FTW DG +K  GS  +GTSPEF++A +T   L
Sbjct:   25 VSNSELLAMAQKLRQVDTNRARPDQ-IKLNYQGH-TVTRDDSDAAQAKLFSKVDT-SLFRKPSYELYINLMDNFNRQTGVIEPRVSQAEEKNEVGKFLDYVLESRPMQELYNWFKAKGHPIATSPQVFRFWIGQLWFSHYSRALGRPDTSGFEHVFIGEAKNGEISGMHNWVRFYVLENNRTENFDYKGF------TVKRFNIMAALKFTW-DGLLKRAGSILIGTSPEFDMALYTMCFL 254
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Celegans
Match: endu-2 (ENDonuclease, poly(U) specific [Source:UniProtKB/TrEMBL;Acc:Q9GYM9])

HSP 1 Score: 85.1149 bits (209), Expect = 4.905e-18
Identity = 70/244 (28.69%), Postives = 121/244 (49.59%), Query Frame = 2 
Query:  119 LQNLLNELWNADFNRCIPGQ---DYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNV---FLEAILNTEVMKIL--QRFLIKHQLIRPGPSSLKQELNKI----WFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCN 811
            LQ L++++W  D +R    Q   ++  ++ G+ TGT+       A+LF+  +E  IF+K   K + DL+  Y  ++ F+ +V K E         +L+ + NT     +    F     +     S+L     K+    WF  Y R  G   S G+EHVF GE+K +++ G H+W++ Y ++K   + Y G++   T +E+    + T Q+ W +G +KP G  F GTSP F+ +  +   L +
Sbjct:  310 LQTLVDKMWGDDQDRPSATQVTMNWGEHISGK-TGTK------GANLFTTVDE-SIFTK---KQYADLITTYTQDL-FTADVCKAEPAMGGFRKQYLQGVFNTFTATPMFASAFAYLQSINYKETSNLTNFKTKVLWPLWFGTYTRCKGPLGSSGWEHVFSGEIKSNEVDGQHDWVRYYTEQKADKMVYDGYY---THDEN---LIGTFQYKW-NGALKPKGGFFTGTSPAFDFSILSVCALAH 534

HSP 2 Score: 78.1814 bits (191), Expect = 9.911e-16
Identity = 59/227 (25.99%), Postives = 98/227 (43.17%), Query Frame = 2 
Query:  188 LNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLD--NYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSF-VGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL 859
            LN Q   +      D A+  LF+   ++ +     Y    +L+   NY+ + +   +       ++  FL+  + ++ +K    FL    +    P   +Q+L  +WF  Y R     SCGF+ VFVGE  G  +    NW+  Y+QE  G  +Y G+F             + I   +  G  + L +SF + +SP FE A +T   L N   + S  I G  +D+
Sbjct:   50 LNYQNMASKKSPDHDNAKDPLFTTV-DKSVLGSNAYITIANLMPFFNYDSDTAVPTSADYASAVKD--FLDNFIASDAVKQAWTFLQAQGVSTSDPIDFRQQLYNLWFLPYARNQALGSCGFKSVFVGEATGTVVNRFANWVGFYIQENAGKFNYHGWF--------TKLNGIAIDLQFVAGSDEDLETSFLLNSSPTFEFAAYTVAALTNT--QPSILIQGEEIDI 263
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Celegans
Match: endu-2 (ENDonuclease, poly(U) specific [Source:UniProtKB/TrEMBL;Acc:Q9GYM9])

HSP 1 Score: 85.1149 bits (209), Expect = 4.905e-18
Identity = 70/244 (28.69%), Postives = 121/244 (49.59%), Query Frame = 2 
Query:  119 LQNLLNELWNADFNRCIPGQ---DYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNV---FLEAILNTEVMKIL--QRFLIKHQLIRPGPSSLKQELNKI----WFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCN 811
            LQ L++++W  D +R    Q   ++  ++ G+ TGT+       A+LF+  +E  IF+K   K + DL+  Y  ++ F+ +V K E         +L+ + NT     +    F     +     S+L     K+    WF  Y R  G   S G+EHVF GE+K +++ G H+W++ Y ++K   + Y G++   T +E+    + T Q+ W +G +KP G  F GTSP F+ +  +   L +
Sbjct:  310 LQTLVDKMWGDDQDRPSATQVTMNWGEHISGK-TGTK------GANLFTTVDE-SIFTK---KQYADLITTYTQDL-FTADVCKAEPAMGGFRKQYLQGVFNTFTATPMFASAFAYLQSINYKETSNLTNFKTKVLWPLWFGTYTRCKGPLGSSGWEHVFSGEIKSNEVDGQHDWVRYYTEQKADKMVYDGYY---THDEN---LIGTFQYKW-NGALKPKGGFFTGTSPAFDFSILSVCALAH 534

HSP 2 Score: 78.1814 bits (191), Expect = 9.911e-16
Identity = 59/227 (25.99%), Postives = 98/227 (43.17%), Query Frame = 2 
Query:  188 LNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLD--NYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSF-VGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL 859
            LN Q   +      D A+  LF+   ++ +     Y    +L+   NY+ + +   +       ++  FL+  + ++ +K    FL    +    P   +Q+L  +WF  Y R     SCGF+ VFVGE  G  +    NW+  Y+QE  G  +Y G+F             + I   +  G  + L +SF + +SP FE A +T   L N   + S  I G  +D+
Sbjct:   50 LNYQNMASKKSPDHDNAKDPLFTTV-DKSVLGSNAYITIANLMPFFNYDSDTAVPTSADYASAVKD--FLDNFIASDAVKQAWTFLQAQGVSTSDPIDFRQQLYNLWFLPYARNQALGSCGFKSVFVGEATGTVVNRFANWVGFYIQENAGKFNYHGWF--------TKLNGIAIDLQFVAGSDEDLETSFLLNSSPTFEFAAYTVAALTNT--QPSILIQGEEIDI 263
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Fly
Match: EndoU (gene:FBgn0038381 transcript:FBtr0083200)

HSP 1 Score: 133.65 bits (335), Expect = 3.560e-36
Identity = 79/226 (34.96%), Postives = 125/226 (55.31%), Query Frame = 2 
Query:  182 YALNLQGRLTGTRTGRDLAQASLFSMFNERKIF-SKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFF---EFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS-FQIG 841
            Y +NLQG+ T +    D A  +LF +  +     +  T  L   L DNYE++V+  E+ T + +QE   FL A++ T VMK+  RFL+   ++        + L ++WF  Y RG G   S  FEHVF+ E++  +++GLHNW+    QE++GN+DYKG+    E G  N+     V+++++T+ +   KP+   FVG SPE ++A +TA  L     E    Q+G
Sbjct:   76 YKVNLQGK-TTSGAHDDRAPRNLFELHQDLLARDANSTTALLMRLFDNYELDVAVQEHPTPEHVQEQYDFLRAVMGTRVMKLTMRFLVHKDIVSVEYDDQLRLLQELWFTPYSRGRGIVGSSSFEHVFMAEIRDQKVLGLHNWLYFADQEQRGNVDYKGWLNHKEMGKHNQ----MVLSVRYTFHNIN-KPVNGFFVGISPELDMALYTACFLATAKEEPCHIQLG 295
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Fly
Match: CG2145 (gene:FBgn0030251 transcript:FBtr0343591)

HSP 1 Score: 131.724 bits (330), Expect = 6.951e-34
Identity = 82/222 (36.94%), Postives = 119/222 (53.60%), Query Frame = 2 
Query:  188 LNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFF---EFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIG 841
            +NLQGR T +    D A   L ++  + K    PT      L +NYE +   +E+VT  E +E N FL+A++ T VM+    FL +  ++ P P + +  + ++WF  Y RG G   S GFEHVFV E+K   IIG HNW+ I  +EK G  DYKG+    + GT       ++V I+F+ + G  KP+ + FVGTSPE E+A +T       D      +G
Sbjct:  354 VNLQGR-TRSIDSADEAPNPLLTV--DSKALESPTIVKMRLLFNNYEHDTHVNEHVTPNERKEENDFLDAVMATPVMRQAMLFLQQKGVVSPDPKTHRDLVKELWFTQYSRGQGKIGSSGFEHVFVYEVKDGTIIGFHNWVYIGDEEKDGRFDYKGYMKEQDIGTKG-----KIVKIRFSHQ-GLNKPVNTVFVGTSPELELALYTVCFQLRPDRTCPVSLG 566
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Fly
Match: CG2145 (gene:FBgn0030251 transcript:FBtr0073387)

HSP 1 Score: 131.724 bits (330), Expect = 6.951e-34
Identity = 82/222 (36.94%), Postives = 119/222 (53.60%), Query Frame = 2 
Query:  188 LNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFF---EFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIG 841
            +NLQGR T +    D A   L ++  + K    PT      L +NYE +   +E+VT  E +E N FL+A++ T VM+    FL +  ++ P P + +  + ++WF  Y RG G   S GFEHVFV E+K   IIG HNW+ I  +EK G  DYKG+    + GT       ++V I+F+ + G  KP+ + FVGTSPE E+A +T       D      +G
Sbjct:  354 VNLQGR-TRSIDSADEAPNPLLTV--DSKALESPTIVKMRLLFNNYEHDTHVNEHVTPNERKEENDFLDAVMATPVMRQAMLFLQQKGVVSPDPKTHRDLVKELWFTQYSRGQGKIGSSGFEHVFVYEVKDGTIIGFHNWVYIGDEEKDGRFDYKGYMKEQDIGTKG-----KIVKIRFSHQ-GLNKPVNTVFVGTSPELELALYTVCFQLRPDRTCPVSLG 566
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Zebrafish
Match: si:dkey-222f8.3 (si:dkey-222f8.3 [Source:ZFIN;Acc:ZDB-GENE-030131-3658])

HSP 1 Score: 235.343 bits (599), Expect = 1.105e-75
Identity = 126/276 (45.65%), Postives = 173/276 (62.68%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSN-ESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAI------HLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSY 898
            Q+L NLLNELW  D NR  PG+DY ++LQG+      G+ + RD A+A LFS  NE K+ S  TY  F  LLDNYE     +E VTK+ELQEN++FL+A+L TEVMK   R+L+     +   +  K++L  IWF++Y  D+ G  DSCGFEHVFVGE K G +I+GLHNWIQ Y  EK+  +DYKG+      +   E   V+ +QF+W +G +KP+G  F+G SPEFE+A +T I      H+ NV      ++  Y ++++  R G +I TSY
Sbjct:    9 QELSNLLNELWKLDVNRMKPGRDYKIDLQGKAGFVSEGSNSARDCARAPLFSHVNENKLKSIDTYAYFITLLDNYETSTGVAEQVTKEELQENSLFLDAVLKTEVMKCAHRYLVSKGRAQSDMAQFKRQLYDIWFKLYRRDKSGAEDSCGFEHVFVGETKHGREIMGLHNWIQFYNLEKQNIVDYKGYKARDKKDTPDEDDHVLNLQFSW-NGLVKPVGGCFIGVSPEFEVALYTIIFLLSGEHMTNV----RVKVDEYLLEIVVYRFGRYIGTSY 279
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Zebrafish
Match: endou2 (endonuclease, polyU-specific 2 [Source:NCBI gene;Acc:553584])

HSP 1 Score: 203.371 bits (516), Expect = 2.313e-63
Identity = 115/272 (42.28%), Postives = 162/272 (59.56%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGR---LTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSYII 904
            ++L  L+ ELW+ D NR  PG DY ++LQG+   L G     D A   LFS  +E  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++++ T  MKI  ++L++ +L     +  KQ+L KIWFE+Y R G    DS GFEHVFVGE +G   +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE + +T   L + +         Y ++++ H     HI T+Y +
Sbjct:    6 RELSALIQELWDNDTNRLRPGIDYRISLQGKAGDLAGVPDDSDGAGMPLFSFVDEN-IFKKETFLAFISLLDNYESDTGEPEIVTPEEEMENHRFLDSVIKTPTMKIAHKYLVEKRLSPEDTTGFKQQLYKIWFELYARKGSSKPDSSGFEHVFVGETRGGHTVIGFHNWIQLYLQEKLGHIDYKGYSVNANSPQPDENKHMLALQFSWKNG-IKPKGSIFIGVSPEFEFSLYTLCFLMSPNERVKVSFNLYDVEIVCHHYNQKHIGTTYPV 275
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Zebrafish
Match: endou2 (endonuclease, polyU-specific 2 [Source:NCBI gene;Acc:553584])

HSP 1 Score: 203.371 bits (516), Expect = 2.313e-63
Identity = 115/272 (42.28%), Postives = 162/272 (59.56%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGR---LTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSYII 904
            ++L  L+ ELW+ D NR  PG DY ++LQG+   L G     D A   LFS  +E  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++++ T  MKI  ++L++ +L     +  KQ+L KIWFE+Y R G    DS GFEHVFVGE +G   +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE + +T   L + +         Y ++++ H     HI T+Y +
Sbjct:    6 RELSALIQELWDNDTNRLRPGIDYRISLQGKAGDLAGVPDDSDGAGMPLFSFVDEN-IFKKETFLAFISLLDNYESDTGEPEIVTPEEEMENHRFLDSVIKTPTMKIAHKYLVEKRLSPEDTTGFKQQLYKIWFELYARKGSSKPDSSGFEHVFVGETRGGHTVIGFHNWIQLYLQEKLGHIDYKGYSVNANSPQPDENKHMLALQFSWKNG-IKPKGSIFIGVSPEFEFSLYTLCFLMSPNERVKVSFNLYDVEIVCHHYNQKHIGTTYPV 275
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Zebrafish
Match: endou2 (endonuclease, polyU-specific 2 [Source:NCBI gene;Acc:553584])

HSP 1 Score: 203.371 bits (516), Expect = 2.313e-63
Identity = 115/272 (42.28%), Postives = 162/272 (59.56%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGR---LTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSYII 904
            ++L  L+ ELW+ D NR  PG DY ++LQG+   L G     D A   LFS  +E  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++++ T  MKI  ++L++ +L     +  KQ+L KIWFE+Y R G    DS GFEHVFVGE +G   +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE + +T   L + +         Y ++++ H     HI T+Y +
Sbjct:    6 RELSALIQELWDNDTNRLRPGIDYRISLQGKAGDLAGVPDDSDGAGMPLFSFVDEN-IFKKETFLAFISLLDNYESDTGEPEIVTPEEEMENHRFLDSVIKTPTMKIAHKYLVEKRLSPEDTTGFKQQLYKIWFELYARKGSSKPDSSGFEHVFVGETRGGHTVIGFHNWIQLYLQEKLGHIDYKGYSVNANSPQPDENKHMLALQFSWKNG-IKPKGSIFIGVSPEFEFSLYTLCFLMSPNERVKVSFNLYDVEIVCHHYNQKHIGTTYPV 275
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Zebrafish
Match: endouc (endonuclease, polyU-specific C [Source:NCBI gene;Acc:562040])

HSP 1 Score: 202.986 bits (515), Expect = 7.201e-63
Identity = 113/274 (41.24%), Postives = 157/274 (57.30%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS--FQIGGYHMDLMHIRKGSHINTSY 898
             + Q+L N+ NELW  D NR  P  +Y ++LQG+      G+    D A + LF   +E K+ S  TY  F  LLDNYE     +E VT +E+ ENN FL+AIL T VMK   ++LI     R      K +L  +WF +Y  +R G  DS GFEHVFVGE K G +I+GLHNW+Q YLQEK+  +DYKG+             V+ +QF+W  G +KP+ S+FVG SPEFE+A FT + L + +   +    +  Y ++++  R G  I T+Y
Sbjct:   26 TVNQELSNIFNELWKLDVNRMEPLTNYNISLQGKAGYIPQGSTNVVDHASSPLFVNVDEAKLSSITTYARFMKLLDNYERSTGVAERVTAEEVTENNSFLDAILETAVMKRAHQYLIGKGKSRSDLRQFKSQLYYMWFRLYHRERNGGEDSSGFEHVFVGETKFGREIMGLHNWVQFYLQEKQNLLDYKGYKARANDVPDADDHVLNVQFSWH-GLVKPVASAFVGVSPEFEMAVFTILFLTSTEKTTTAVVNLDEYQLEMVVHRHGRCIGTAY 298
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Xenopus
Match: gclc (glutamate-cysteine ligase, catalytic subunit [Source:Xenbase;Acc:XB-GENE-1002435])

HSP 1 Score: 236.113 bits (601), Expect = 8.100e-76
Identity = 125/280 (44.64%), Postives = 175/280 (62.50%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR--GGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESE---SPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSYIIGL 910
            L  +L  L NELW+AD NR   G+DY ++LQG+      G+   RD A   LF   +E K+ S+ T+  F  LLDNYEM+   +E VT +E+ ENN FL+AIL T+VMKI   +L++    +P  +  K +L  IWF++Y R  G   DSCGFEHVFVGE K G +I+GLHNW+Q YLQEK+  IDYKG+   G  N+S      QV+ +QF+WK+  +KP+GSSF+G SPEFE A +T + L + +    +  ++  Y M ++  R G +I T+Y + L
Sbjct:    9 LNHELSKLFNELWDADENRMKAGKDYRISLQGKAGYVPAGSNQARDSASYPLFQFVDEEKLRSRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNTFLDAILETKVMKIAHDYLVRKNQAKPSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKRGKEIMGLHNWVQFYLQEKRKTIDYKGY--VGRQNKSRPDHDDQVLNLQFSWKE-MVKPIGSSFIGVSPEFEFALYTVVFLTSQEKMTREVVRVEEYEMQIVVNRHGRYIGTAYPVLL 285
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Xenopus
Match: gclc (glutamate-cysteine ligase, catalytic subunit [Source:Xenbase;Acc:XB-GENE-1002435])

HSP 1 Score: 235.343 bits (599), Expect = 3.770e-75
Identity = 125/280 (44.64%), Postives = 175/280 (62.50%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR--GGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESE---SPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSYIIGL 910
            L  +L  L NELW+AD NR   G+DY ++LQG+      G+   RD A   LF   +E K+ S+ T+  F  LLDNYEM+   +E VT +E+ ENN FL+AIL T+VMKI   +L++    +P  +  K +L  IWF++Y R  G   DSCGFEHVFVGE K G +I+GLHNW+Q YLQEK+  IDYKG+   G  N+S      QV+ +QF+WK+  +KP+GSSF+G SPEFE A +T + L + +    +  ++  Y M ++  R G +I T+Y + L
Sbjct:   33 LNHELSKLFNELWDADENRMKAGKDYRISLQGKAGYVPAGSNQARDSASYPLFQFVDEEKLRSRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNTFLDAILETKVMKIAHDYLVRKNQAKPSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKRGKEIMGLHNWVQFYLQEKRKTIDYKGY--VGRQNKSRPDHDDQVLNLQFSWKE-MVKPIGSSFIGVSPEFEFALYTVVFLTSQEKMTREVVRVEEYEMQIVVNRHGRYIGTAYPVLL 309
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Xenopus
Match: ENSXETT00000003055.1 (endonuclease, poly(U) specific like 2 [Source:NCBI gene;Acc:100497154])

HSP 1 Score: 165.622 bits (418), Expect = 2.493e-48
Identity = 96/264 (36.36%), Postives = 146/264 (55.30%), Query Frame = 2 
Query:  116 DLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRT--GRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR-GGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSY 898
            ++Q+L  + + AD N+   G D  LNLQ + T +++  G D A   LFS  NE K+F++PT+     LLDNY      +E+V   E+QE N F++ I  T ++  L  F I         +S K +L ++WF +Y R  G  DS GFEHVF GE+   +I GLH+W+Q+YL EK G ++Y  +   G    +  P V   Q  W +  +K +GS FVG+SPEF+IA +T  ++   D+  + Q+GG       I+  +  N++Y
Sbjct:   37 EIQSLAEQFYAADTNKAASG-DINLNLQYKATSSQSTSGTDYASQKLFSYVNEAKLFARPTFAKLVALLDNYVQITGTAESVPTAEVQEQNAFIDEIFKTSIITKLSNFFISKGYYSTA-ASFKTDLKEMWFGLYTRTSGPLDSSGFEHVFHGEIHKGKISGLHSWVQLYLLEKSGQVNYLSYTSDGV--WTGYPDVYAFQLKW-NTYLKTIGSFFVGSSPEFDIAMYTLCYVTRPDSLCTVQMGG---STFQIQTYTWANSTY 292
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Xenopus
Match: ENDOU (endonuclease, poly(U) specific [Source:NCBI gene;Acc:100490819])

HSP 1 Score: 145.591 bits (366), Expect = 1.274e-39
Identity = 89/253 (35.18%), Postives = 135/253 (53.36%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRG-GFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL 859
            +   +++ +  +L+  D N+     D  LN Q     TR   DL +  L+   NE+ +F +PTY  F  LLDNY+ +    E+ +  E++E   FL+ I+ T++MK L  F     L +     +K +L K+WF +Y R  G  DS GFEHVFVGE+K   + G HNWI+ Y+ EKKG +DY      G    +  P V+  QF W DG  K +GS F+G+SPEF+ + +T   +     +    +GGY + +
Sbjct:  148 ISNDEIKAVSEKLYKQDVNK-AGESDIILNKQEMAHNTREQEDLCEEPLYKYVNEQ-LFKRPTYAAFIALLDNYDRKTGIDESYSAAEIKEQERFLQEIMKTQIMKELFSFFHSKGLYQTEKEFVK-DLQKMWFGLYSRSTGEADSSGFEHVFVGEVKKGIVSGFHNWIRFYMLEKKGLLDYYSHNFDGP--WTSYPDVLGQQFYW-DGFYKEVGSQFIGSSPEFDFSIYTLCFISRPGRKCKISLGGYGLTI 394
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Mouse
Match: Endou (endonuclease, polyU-specific [Source:MGI Symbol;Acc:MGI:97746])

HSP 1 Score: 166.392 bits (420), Expect = 1.483e-47
Identity = 97/255 (38.04%), Postives = 143/255 (56.08%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGR--DLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR-DSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL 859
            V K++L+++   ++  D N+    +D  LN Q R++ + TG   D +   LF+  NE K+FSKPTY  F +LL+NY+      E+ + Q+L+E  VFL  ++ T VMK L  FL  HQ           +L  +WF +Y RG    DS GFEHVF GE+K  ++ G HNWI+ YLQEK+G +DY      G  +    P V+ +QF W DG  K +GS F+G+SPEFE A ++   +     +    +GGY + +
Sbjct:  137 VTKEELESISETIYRVDTNK-AQKEDIVLNSQNRISPSETGNQVDRSPEPLFTYVNE-KLFSKPTYAAFINLLNNYQRATGHGEHFSAQQLEEQGVFLREVMKTAVMKELYSFL-HHQNRYSSEQEFVDDLKNMWFGLYSRGNDEGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLQEKEGLLDYYSHNYDGPWD--SYPDVLAMQFNW-DGYYKEVGSVFIGSSPEFEFALYSLCFITRPGKKCHLSLGGYPLAI 385
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Mouse
Match: Endou (endonuclease, polyU-specific [Source:MGI Symbol;Acc:MGI:97746])

HSP 1 Score: 165.622 bits (418), Expect = 6.405e-47
Identity = 97/255 (38.04%), Postives = 143/255 (56.08%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGR--DLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR-DSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDL 859
            V K++L+++   ++  D N+    +D  LN Q R++ + TG   D +   LF+  NE K+FSKPTY  F +LL+NY+      E+ + Q+L+E  VFL  ++ T VMK L  FL  HQ           +L  +WF +Y RG    DS GFEHVF GE+K  ++ G HNWI+ YLQEK+G +DY      G  +    P V+ +QF W DG  K +GS F+G+SPEFE A ++   +     +    +GGY + +
Sbjct:  179 VTKEELESISETIYRVDTNK-AQKEDIVLNSQNRISPSETGNQVDRSPEPLFTYVNE-KLFSKPTYAAFINLLNNYQRATGHGEHFSAQQLEEQGVFLREVMKTAVMKELYSFL-HHQNRYSSEQEFVDDLKNMWFGLYSRGNDEGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLQEKEGLLDYYSHNYDGPWD--SYPDVLAMQFNW-DGYYKEVGSVFIGSSPEFEFALYSLCFITRPGKKCHLSLGGYPLAI 427
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. UniProt/SwissProt
Match: sp|B1H3D5|ENDOU_XENTR (Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.291e-75
Identity = 125/280 (44.64%), Postives = 175/280 (62.50%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR--GGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESE---SPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSYIIGL 910
            L  +L  L NELW+AD NR   G+DY ++LQG+      G+   RD A   LF   +E K+ S+ T+  F  LLDNYEM+   +E VT +E+ ENN FL+AIL T+VMKI   +L++    +P  +  K +L  IWF++Y R  G   DSCGFEHVFVGE K G +I+GLHNW+Q YLQEK+  IDYKG+   G  N+S      QV+ +QF+WK+  +KP+GSSF+G SPEFE A +T + L + +    +  ++  Y M ++  R G +I T+Y + L
Sbjct:    9 LNHELSKLFNELWDADENRMKAGKDYRISLQGKAGYVPAGSNQARDSASYPLFQFVDEEKLRSRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNTFLDAILETKVMKIAHDYLVRKNQAKPSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKRGKEIMGLHNWVQFYLQEKRKTIDYKGY--VGRQNKSRPDHDDQVLNLQFSWKE-MVKPIGSSFIGVSPEFEFALYTVVFLTSQEKMTREVVRVEEYEMQIVVNRHGRYIGTAYPVLL 285
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. UniProt/SwissProt
Match: sp|Q8JFY9|ENDUA_XENLA (Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.345e-73
Identity = 122/278 (43.88%), Postives = 174/278 (62.59%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR--GGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEF-GTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSYIIGL 910
            L  +L  L NELW+AD NR   G+DY ++LQG+      G+   RD A   LF   +E K+ S+ T+  F  LLDNYEM+   +E VT +E+ ENN FL+AIL T+VMK+   +L++    +P  +  K +L  IWF++Y R  G   DSCGFEHVFVGE K G +++GLHNW+Q YLQEK+ NIDYKG+      S   E  QV+ +QF WK+  +KP+GSSF+G SPEFE A +T + L + +  + +  ++  Y + ++  R G +I T+Y + L
Sbjct:    8 LNHELSKLFNELWDADQNRMKSGKDYRISLQGKAGYVPAGSNQARDSASFPLFQFVDEEKLKSRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAKPTRNDFKVQLYNIWFQLYSRAPGSRPDSCGFEHVFVGESKRGQEMMGLHNWVQFYLQEKRKNIDYKGYVARQNKSRPDEDDQVLNLQFNWKE-MVKPVGSSFIGVSPEFEFALYTIVFLASQEKMSREVVRLEEYELQIVVNRHGRYIGTAYPVLL 284
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. UniProt/SwissProt
Match: sp|B1WBB4|ENDUB_XENLA (Poly(U)-specific endoribonuclease-B OS=Xenopus laevis OX=8355 GN=endou-b PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.456e-72
Identity = 119/274 (43.43%), Postives = 171/274 (62.41%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR--GGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEF-GTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSY 898
            +  +L  L NELW+AD NR   G+DY ++LQG+       +   +D A   LF   +E K+ SK T+  F  LLDNYEM+   +E VT +E+ ENN FL+AIL T+VMK+   +L++    +P  +  K +L  IWF++Y R  G   DSCGFEHVFVGE K G +++GLHNW+Q YLQEK+ NIDYKG+      S   E  QV+ +QF+WK+  +KP+GSSF+G SPEFE A +T + L +    + +  ++  Y + ++  R G +I T+Y
Sbjct:    8 VNHELSKLFNELWDADVNRMKAGKDYRISLQGKAGYVPARSNQAKDSASYPLFQFVDEEKLKSKKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAKPSQNDFKVQLYSIWFQLYSRAPGSRPDSCGFEHVFVGESKRGKEMMGLHNWVQFYLQEKRKNIDYKGYVARQNKSRPDEDDQVLNLQFSWKE-MVKPVGSSFIGVSPEFEFALYTIVFLASQAKMSREVIRLEEYELQIVVNRHGRYIGTAY 280
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. UniProt/SwissProt
Match: sp|Q503V9|ENDUB_DANRE (Poly(U)-specific endoribonuclease-B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.585e-62
Identity = 115/274 (41.97%), Postives = 163/274 (59.49%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGR---LTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSYIIGL 910
            ++L  L+ ELW+ D NR  PG DY ++LQG+   L G     D A   LFS  +E  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++++ T  MKI  ++L++ +L     +  KQ+L KIWFE+Y R G    DS GFEHVFVGE +G   +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE + +T   L + +         Y ++++ H     HI T+Y + +
Sbjct:    6 RELSALIQELWDNDTNRLRPGIDYRISLQGKAGDLAGVPDDSDGAGMPLFSFVDEN-IFKKETFLAFISLLDNYESDTGEPEIVTPEEEMENHRFLDSVIKTPTMKIAHKYLVEKRLSPEDTTGFKQQLYKIWFELYARKGSSKPDSSGFEHVFVGETRGGHTVIGFHNWIQLYLQEKLGHIDYKGYSVNANSPQPDENKHMLALQFSWKNG-IKPKGSIFIGVSPEFEFSLYTLCFLMSPNERVKVSFNLYDVEIVCHHYNQKHIGTTYPVPV 277
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. UniProt/SwissProt
Match: sp|Q1LUM3|ENDUC_DANRE (Poly(U)-specific endoribonuclease-C OS=Danio rerio OX=7955 GN=endouc PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.436e-62
Identity = 113/274 (41.24%), Postives = 157/274 (57.30%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS--FQIGGYHMDLMHIRKGSHINTSY 898
             + Q+L N+ NELW  D NR  P  +Y ++LQG+      G+    D A + LF   +E K+ S  TY  F  LLDNYE     +E VT +E+ ENN FL+AIL T VMK   ++LI     R      K +L  +WF +Y  +R G  DS GFEHVFVGE K G +I+GLHNW+Q YLQEK+  +DYKG+             V+ +QF+W  G +KP+ S+FVG SPEFE+A FT + L + +   +    +  Y ++++  R G  I T+Y
Sbjct:   26 TVNQELSNIFNELWKLDVNRMEPLTNYNISLQGKAGYIPQGSTNVVDHASSPLFVNVDEAKLSSITTYARFMKLLDNYERSTGVAERVTAEEVTENNSFLDAILETAVMKRAHQYLIGKGKSRSDLRQFKSQLYYMWFRLYHRERNGGEDSSGFEHVFVGETKFGREIMGLHNWVQFYLQEKQNLLDYKGYKARANDVPDADDHVLNVQFSWH-GLVKPVASAFVGVSPEFEMAVFTILFLTSTEKTTTAVVNLDEYQLEMVVHRHGRCIGTAY 298
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. TrEMBL
Match: A0A498MHW1 (Poly(U)-specific endoribonuclease-C-like protein OS=Labeo rohita OX=84645 GN=ROHU_002963 PE=4 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.056e-77
Identity = 130/279 (46.59%), Postives = 183/279 (65.59%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESP----QVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEK----SFQIGGYHMDLMHIRKGSHINTSY 898
            + ++L +LLNELW  D NR +PG+DY +NLQG+      G+   RD A+A LFS  NE K+ S  TY  F +LLDNYEM    +E+VTK+ELQEN++FL+AIL TEVMK   R+L++  L +  P+  K +L  IWF++Y  D+ G  DSCGFEHVFVGE K G +I+GLHNW+Q Y QEK  ++DYKG   +   N  ++P     V+ +QF+W +G +KP+GS F+G SPEFE+A FT +    + NE+    + ++  Y ++++  R G  I TSY
Sbjct:    7 INRELSDLLNELWKLDVNRMMPGKDYKINLQGKAGFVAEGSNHARDSARAPLFSYVNENKLKSIDTYAHFINLLDNYEMSTGVAEHVTKEELQENHLFLDAILKTEVMKCAHRYLVRKGLAQSDPAKFKSQLYDIWFKLYRRDKSGGEDSCGFEHVFVGETKHGKEIMGLHNWVQFYHQEKHNHVDYKG---YKARNNKDTPDEDDHVLNLQFSW-NGLVKPVGSCFIGVSPEFEVALFTIVFF--LSNERVTNVTVKVDEYLLEIVVYRFGRSIGTSY 279
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. TrEMBL
Match: A0A4W4GJE5 (XendoU domain-containing protein OS=Electrophorus electricus OX=8005 GN=LOC113572557 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.346e-77
Identity = 130/274 (47.45%), Postives = 174/274 (63.50%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLT----GTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDN--EKSFQIGGYHMDLMHIRKGSHINTSY 898
            V+ Q+L  +LNELW  D NR  PG+DY +NLQG+      GT + RD A A LFS  NE K+ S  +Y  F  LLDNYEM    +E VT +ELQEN++FL+AIL TEVMK   ++L+         ++ K++L  IWF++Y  DR G  DSCGFEHVFVGE K G +I+GLHNW+Q YLQE    +DYKG+         E   V+ +QF+WK G +KPLGSSF+G SPEFE+A FT I L + ++  +   ++  Y ++++  R G  I TSY
Sbjct:    6 VVDQELSAVLNELWKLDVNRLKPGKDYKINLQGKADFVSQGTNSARDKASAPLFSYVNEDKLKSIASYACFIKLLDNYEMSTGVAEKVTSKELQENHLFLDAILKTEVMKHTHKYLVSKGQASSDIATFKKQLYDIWFKLYNRDRRGGADSCGFEHVFVGETKYGKEIMGLHNWVQFYLQENLNVVDYKGYKARNKDTPDEDDHVLNLQFSWK-GLVKPLGSSFIGVSPEFEVALFTIIFLKSNEHMTKTVVKVDEYLLEIVVCRHGHSIGTSY 278
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. TrEMBL
Match: A0A3N0XDF2 (Poly(U)-specific endoribonuclease-C OS=Anabarilius grahami OX=495550 GN=DPX16_12915 PE=4 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 7.714e-77
Identity = 132/276 (47.83%), Postives = 180/276 (65.22%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESP----QVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCN---VDNEKSFQIGGYHMDLMHIRKGSHINTSY 898
            Q+L ++LNELW  D NR  PG+DY +NLQG+      G+   RD A+A LFS  NE K+ S  TY  F +LLDNYEM    +E VTK+ELQENN+FL+AIL TEVMK   R+L++    +  P+  K++L  IWF++Y  D+ G  DSCGFEHVFVGE K G +I+GLHNW+Q Y QEK  ++DYKG   +   N  ++P     V+ +QF+W +G +KP+GS F+G SPEFE+A FT + L +   V N K  ++  Y ++++  R G  I TSY
Sbjct:   42 QELSDVLNELWKLDVNRMKPGKDYKINLQGKAGFVSEGSNNARDSARAPLFSYVNENKLKSVDTYAHFINLLDNYEMSTGVAEQVTKEELQENNLFLDAILKTEVMKCAHRYLVRKGRAQSDPAQFKRQLYDIWFKLYRRDKSGGEDSCGFEHVFVGETKHGKEIMGLHNWVQFYHQEKHNHVDYKG---YKARNNKDTPDEDDHVLNLQFSW-NGLVKPVGSCFIGVSPEFEVALFTIVFLLSDERVTNVK-VKVDEYLLEIVVYRFGYSIGTSY 312
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. TrEMBL
Match: A0A553N0H0 (XendoU domain-containing protein OS=Danionella translucida OX=623744 GN=DNTS_013428 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.416e-76
Identity = 130/276 (47.10%), Postives = 176/276 (63.77%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSN-ESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEK----SFQIGGYHMDLMHIRKGSHINTSY 898
            + ++L +LLNELW  D NR  PG DY +NLQG+      G+   RD A+A LFS  NE K+ S  TYK F +LLDNYEM    +E VTK+ELQEN++FL+AIL T+VMK   R+L+      P     K++L  IWF++Y  D+ G  DSCGFEHVFVGE K G +I+GLHNW+Q Y QEK  N+DYKG+      +   E   V+ +QF+WK G +KP+GS F+G SPEFE+A FT + L  + +E+      ++  Y ++++  R G  I TSY
Sbjct:    8 INKELSDLLNELWKLDVNRMKPGTDYKINLQGKAGFVAEGSNIARDCARAPLFSYVNENKLQSIDTYKYFINLLDNYEMSTGVAEQVTKEELQENDLFLDAILKTDVMKCAHRYLVSKGRASPDMGQFKKQLYAIWFKLYRRDKSGGEDSCGFEHVFVGETKHGKEIMGLHNWVQFYTQEKLNNVDYKGYKSRDNKDTPDEDDHVLNLQFSWK-GLVKPVGSCFLGVSPEFEVALFTIVFL--ISDERMTNVKVKVDEYLLEVVVYRFGRSIGTSY 280
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. TrEMBL
Match: A0A1S3M0U2 (poly(U)-specific endoribonuclease-C-like isoform X1 OS=Salmo salar OX=8030 GN=LOC106569697 PE=4 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.335e-76
Identity = 128/274 (46.72%), Postives = 173/274 (63.14%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSN-ESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS--FQIGGYHMDLMHIRKGSHINTSY 898
            +  +L  +LN+LW+ D NR  PG DY ++LQG+      G+ T RD+A+A LF+  NE K+ +  TY LF  LLDNYEM    SE VT +EL EN++FL AIL TEVMK   ++L+            K++L  +WF +Y  DR G  DSCGFEHVFVGE K G +I G HNW+Q YLQEK GN+DYKG+   G  N   E   V+ +QF+WK G +KP+GSSF+G SPEFE+A FT + L + D   +   ++  Y ++++  R+G  I TSY
Sbjct:    7 VNHELSEVLNQLWSRDTNRLKPGTDYTISLQGKAGYVAQGSNTARDMARAPLFAYVNEGKLKNIKTYALFMRLLDNYEMSTGVSETVTSEELMENDLFLNAILETEVMKCAHKYLVSKGRSPSDQQQFKRQLYDMWFRLYHRDRSGGEDSCGFEHVFVGESKYGKEITGFHNWVQFYLQEKHGNVDYKGYKAQGNRNTPDEDDHVLNLQFSWK-GLVKPVGSSFIGVSPEFEVALFTILFLTSTDKVTTAVVKVDEYLLEVVVYRQGRSIGTSY 279
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Cavefish
Match: si:dkey-222f8.3 (poly(U)-specific endoribonuclease-C-like [Source:NCBI gene;Acc:103022401])

HSP 1 Score: 235.343 bits (599), Expect = 7.501e-76
Identity = 126/274 (45.99%), Postives = 167/274 (60.95%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLT----GTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSY 898
             + Q+L  +LNELW  D NR  PG+DY +NLQG+      G+    D A A LF+  NE K+ S PTY  F  LLDNYEM    SE VT QE +E N+FL+AIL TEVMK   + L+  +      +  K++L  IWF++Y  D+ G  DSCGFEHVFVGE K   +I+GLHNW+Q YLQEK   +DYKG+        + +  VV +QF+WKD  +KP GSSF+G SPEFE+A FT   L + D   +   ++  Y ++++  R G  I TSY
Sbjct:    6 AVDQELSAVLNELWKLDVNRLKPGKDYTINLQGKADYVAQGSNRANDKANAPLFTYVNEGKLKSIPTYARFISLLDNYEMSTGVSEQVTSQEQEEENLFLDAILKTEVMKHAHQHLVSKKQASADVALFKKQLFDIWFKLYHRDKSGGEDSCGFEHVFVGETKYRKEIMGLHNWVQFYLQEKLKCVDYKGYKATDRDKPTANDHVVNLQFSWKD-LVKPTGSSFIGVSPEFEMALFTIAFLMSNDRLTKTVVKVDKYLIEIVMCRHGRAIGTSY 278
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Cavefish
Match: si:dkey-222f8.3 (poly(U)-specific endoribonuclease-C-like [Source:NCBI gene;Acc:103022401])

HSP 1 Score: 234.958 bits (598), Expect = 1.289e-75
Identity = 126/271 (46.49%), Postives = 166/271 (61.25%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVD--NEKSFQIGGYHMDLMHIRKGSHINTSY 898
            Q+L  +LNELW  D NR  PG+DY +NLQG+      G+    D A A LF+  NE K+ S PTY  F  LLDNYEM    SE VT QE +E N+FL+AIL TEVMK   + L+  +      +  K++L  IWF++Y  D+ G  DSCGFEHVFVGE K   +I+GLHNW+Q YLQEK   +DYKG+        + +  VV +QF+WKD  +KP GSSF+G SPEFE+A FT   L + D   +   ++  Y ++++  R G  I TSY
Sbjct:    9 QELSAVLNELWKLDVNRLKPGKDYTINLQGKADYVAQGSNRANDKANAPLFTYVNEGKLKSIPTYARFISLLDNYEMSTGVSEQVTSQEQEEENLFLDAILKTEVMKHAHQHLVSKKQASADVALFKKQLFDIWFKLYHRDKSGGEDSCGFEHVFVGETKYRKEIMGLHNWVQFYLQEKLKCVDYKGYKATDRDKPTANDHVVNLQFSWKD-LVKPTGSSFIGVSPEFEMALFTIAFLMSNDRLTKTVVKVDKYLIEIVMCRHGRAIGTSY 278
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Cavefish
Match: endouc (poly(U)-specific endoribonuclease-C-like [Source:NCBI gene;Acc:103044623])

HSP 1 Score: 217.238 bits (552), Expect = 1.695e-68
Identity = 115/274 (41.97%), Postives = 162/274 (59.12%), Query Frame = 2 
Query:  104 VLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS--FQIGGYHMDLMHIRKGSHINTSY 898
             + QDL ++ NELW  D NR  PG DY ++LQG+     +G+ T  D A A LFS  +  K+ +  TY  F  LLDNYE     +E VT +E+ ENN FL+A+L + VMK   ++L+     +      K +L  +WF +Y  DR G  DS GFEHVFVGE K G +I+GLHNW+Q YLQEK+  +DYKG+         E   V+ +QF+W  G +KP+GS+F+G SPEFE+A F+ + L + +   +    +  Y ++L+  R G  I TSY
Sbjct:   26 TVNQDLSDIFNELWKLDVNRMKPGTDYRISLQGKAGYIPSGSTTATDHASAPLFSYVDMDKLNTITTYTRFMKLLDNYERSTGVAERVTSEEVAENNAFLDAVLESAVMKRAHQYLVNKGKSQSNLRQFKSQLYYMWFRLYHRDRNGGEDSSGFEHVFVGETKFGKEIMGLHNWVQFYLQEKQNLLDYKGYKARSNDVPDEDDHVLNVQFSWH-GLVKPVGSTFLGVSPEFEMAVFSILFLTSTEKTTTAVVNLDEYQLELVVHRHGRSIGTSY 298
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Cavefish
Match: endou2 (poly(U)-specific endoribonuclease-B [Source:NCBI gene;Acc:103045733])

HSP 1 Score: 205.682 bits (522), Expect = 2.659e-64
Identity = 113/272 (41.54%), Postives = 166/272 (61.03%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGR---LTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSYII 904
            ++L  ++ ELW+ D NR  PG DY ++LQG+   L+      D A + LF+  +E  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++I+NT  MKI+ ++L+K  +     ++ K++L +IWFE+Y R G    DS GFEHVFVGE +G + +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE A +T   L + +         Y ++++ H     HI T+Y +
Sbjct:    6 RELSAMVQELWDNDVNRLKPGTDYRISLQGKAGNLSTLNDDYDAAGSPLFTYVDE-SIFKKETFLAFISLLDNYESDTGEPEIVTPEEEVENHKFLDSIVNTSAMKIVHKYLVKKHISPEDMTAFKEQLYRIWFELYARRGSSRPDSSGFEHVFVGETRGGRTVIGFHNWIQLYLQEKLGHIDYKGYSVNTNSPQPDENKHILALQFSWKNG-IKPKGSIFIGVSPEFEFALYTLCFLTSPNERVRVSFNLYDVEIVCHHYNQKHIGTTYPV 275
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Cavefish
Match: endou2 (poly(U)-specific endoribonuclease-B [Source:NCBI gene;Acc:103045733])

HSP 1 Score: 205.682 bits (522), Expect = 2.659e-64
Identity = 113/272 (41.54%), Postives = 166/272 (61.03%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGR---LTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSYII 904
            ++L  ++ ELW+ D NR  PG DY ++LQG+   L+      D A + LF+  +E  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++I+NT  MKI+ ++L+K  +     ++ K++L +IWFE+Y R G    DS GFEHVFVGE +G + +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE A +T   L + +         Y ++++ H     HI T+Y +
Sbjct:    6 RELSAMVQELWDNDVNRLKPGTDYRISLQGKAGNLSTLNDDYDAAGSPLFTYVDE-SIFKKETFLAFISLLDNYESDTGEPEIVTPEEEVENHKFLDSIVNTSAMKIVHKYLVKKHISPEDMTAFKEQLYRIWFELYARRGSSRPDSSGFEHVFVGETRGGRTVIGFHNWIQLYLQEKLGHIDYKGYSVNTNSPQPDENKHILALQFSWKNG-IKPKGSIFIGVSPEFEFALYTLCFLTSPNERVRVSFNLYDVEIVCHHYNQKHIGTTYPV 275
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003317.1 (pep scaffold:Pmarinus_7.0:GL476561:262239:267700:-1 gene:ENSPMAG00000003028.1 transcript:ENSPMAT00000003317.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 230.335 bits (586), Expect = 2.259e-74
Identity = 122/281 (43.42%), Postives = 172/281 (61.21%), Query Frame = 2 
Query:  116 DLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGF--RDSCGFEHVFVGEL-KGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNES-ESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLC---NVDNEKS----FQIGGYHMDLMHIRKGSHINTSYIIGLD 913
            +L+ +LNELW AD NR  PG  YA++ QG+      G+ + RD A   LF   +E  + S+ TYK F  LLDNYE +   +E VT +E++EN+ FL+A++ T VM+I   FL    L    P   KQ L +IWFE+Y RGG    DS GFEHVFVGE  +  +++G HNW+Q YLQEK+GN+DYKGF      ++  E   ++T+QF+WK   +KP GSSF+G SPEFE+A +T   L      D E+S     ++  + ++L+  R G+HI T Y + L+
Sbjct:   10 ELEGVLNELWKADVNRLTPGTHYAISPQGKAGYVPPGSDSARDCAARPLFIFVDEAALQSRDTYKTFIALLDNYEEQTGTTETVTAEEVRENHRFLDAVMQTAVMQIAHEFLASKGLASKDPGKFKQHLYRIWFELYSRGGCISADSSGFEHVFVGETRRSRELLGFHNWVQFYLQEKRGNVDYKGFVARRYKDKPDEDDHLLTLQFSWK-AAVKPAGSSFIGCSPEFELATYTLCFLAGGGGRDGERSSRYPLRLDEFRLELVCHRHGTHIGTVYPVLLE 289
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000697.1 (pep scaffold:Pmarinus_7.0:GL477040:332119:350135:1 gene:ENSPMAG00000000628.1 transcript:ENSPMAT00000000697.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 218.009 bits (554), Expect = 1.551e-69
Identity = 117/275 (42.55%), Postives = 174/275 (63.27%), Query Frame = 2 
Query:  110 KQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR-DSCGFEHVFVGEL-KGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSF--QIGGYHMDLMHIRKGSHINTSYIIGL 910
            +++LQ +++ LW+AD NR  PG+DYA++LQGR     TG+ + RD A   LF   +E ++    T++LF  LLDNYE     +E VT +E  EN  FL+A+  T VM+I  +FL +  L    P   K++L  IWF++Y R  +R DS GFEHVFVGE  +G  I+G HNW+Q YLQEK G++DYKG+    +S   +   ++T+QF+WK G +KP+GSSF+G SPEFE+A +T   L + +   ++  ++  Y + L   R+G+ I +SY + L
Sbjct:   26 ERELQEVMSALWDADVNRLKPGRDYAIDLQGRAGYVPTGSNSARDCAVRPLFKFVDEGRLHGIETFRLFLSLLDNYESSTGIAETVTAEEEAENRHFLDAVTQTGVMQIAHKFLAERGLADRSPEGFKRQLYSIWFQLYSRDNYRGDSSGFEHVFVGETRRGANILGFHNWVQFYLQEKHGHVDYKGYKAQRSSRPDDQDHLLTLQFSWK-GVVKPMGSSFIGVSPEFEMAVYTVCFLLSRERSSTYAMRLDEYSVRLECHRQGNRIGSSYPVLL 299
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Sea Lamprey
Match: endou (endonuclease, polyU-specific [Source:NCBI gene;Acc:791216])

HSP 1 Score: 72.4034 bits (176), Expect = 4.427e-16
Identity = 38/115 (33.04%), Postives = 65/115 (56.52%), Query Frame = 2 
Query:  554 VFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSY 898
            V  GE+KG ++ G HNW+  Y  EK+G ++Y  F        +  P V+ +QF W DG  K +GS+F+G+SPEF++A ++   +   D     ++ G   +++ I+  +  N+SY
Sbjct:    1 VPTGEIKGGKVSGFHNWVSFYFLEKEGKLNY--FSHNWDGPWTSYPDVLAMQFNW-DGYFKEVGSAFIGSSPEFDLAIYSLCFISKPDGACKIKLDG---NIIGIQTYTWTNSSY 109
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Nematostella
Match: EDO43082 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZF6])

HSP 1 Score: 154.836 bits (390), Expect = 1.828e-45
Identity = 91/259 (35.14%), Postives = 145/259 (55.98%), Query Frame = 2 
Query:  137 ELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQII-GLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHI--RKGSHINTSYII 904
             L+ AD NR   G DY ++LQ   T      D+A   LF+  NE ++    T+     L DNY +     E+ +KQE +E   F+EA++ T+VMK+   +L+  +L+     S K+ L K+WF  Y R    D+ GFEHVFVG  +   ++ G+HNW++ Y +EKK   DY+GF     +N +E P++VT +F +   + KP+G  FVGTSPEFE++ +T   L   + + + Q+ G  + ++    R+ S + T+Y +
Sbjct:    2 RLFQADINRLYHGVDYNISLQNH-TRPSMRDDVAPLPLFTWVNETRL-KHTTFSSMEALFDNYFLYTGNKEHESKQEREEKKGFIEAVMATDVMKLTHNYLVHERLVPKSRGSFKKLLIKLWFNFYRRKTAGDTSGFEHVFVGNRRPQDVVGGMHNWVRFYREEKKKKADYEGFI---VANTAE-PRIVTARFKYHTVQ-KPIGGFFVGTSPEFELSLYTTCFLKYPNGKCTCQMNGKRVKMITYRDRRTSLVATAYPV 253
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Nematostella
Match: EDO30692 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T024])

HSP 1 Score: 153.295 bits (386), Expect = 2.292e-44
Identity = 94/277 (33.94%), Postives = 148/277 (53.43%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQ--GRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLI--KHQLIRPGPSSLKQ---ELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQ------IIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSY 898
            +  D+ ++  ++WN D N    G D+ ++ Q   +     +GRDL     F+  N  K+   PTY  F +LLDNY M++  +E +T  E QEN  FL+A++ T V + +  +L+    +L    PS+  Q   +L KIWF  Y+RG +RDS GFEHVFVGE   D       + G H+W+Q YLQEK+ + DY G++   TS     P+ + ++F   +   K + S F+GTSPEFE + +TA        E + +I    + +    +G  + T++
Sbjct:   22 ITSDIGDVCQDMWNEDTNSLKYGVDFTIDKQNPAKSYVDSSGRDL-----FTYVNTWKL-RGPTYTTFINLLDNYYMKIGITERLTDTEKQENRNFLKAVMQTNVFRKMHAYLLASASRLSLTVPSTQSQFEDQLYKIWFYFYNRGAYRDSSGFEHVFVGEKYDDSKSGKKIVKGYHSWLQFYLQEKRRDADYHGYYALSTSE----PRGLKLKFD-VNNYDKVVSSFFLGTSPEFEFSLYTACFYLRPGQECTCRINSQTIKIRTYTQGRFVGTAF 287
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Nematostella
Match: EDO43141 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZF4])

HSP 1 Score: 104.76 bits (260), Expect = 6.016e-27
Identity = 68/205 (33.17%), Postives = 110/205 (53.66%), Query Frame = 2 
Query:  305 TDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQI---IGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHI--RKGSHINTSYII 904
            T L DNY +     E+ +KQE +E   F+EA++ T+VMK+   +L+  +L+   P S KQ L K+WF  Y R    D+ GFE   V      QI    G+HNW+  Y +E K   DY+G+ ++       S  +  + F ++  + KP+G  FVGTSPEFE++ +T   L   + + + Q+ G  + ++    R+ S + T+Y +
Sbjct:    5 TALFDNYFLYTGNKEHESKQEREEKKGFIEAVMATDVMKLTHNYLVHERLV---PKSRKQ-LIKLWFNFYRRKTAGDTSGFEQ--VTPFDTSQIRRRWGIHNWVCFYREENKKGADYEGYTKY------LSLSMTFLTFMYRTVQ-KPIGGFFVGTSPEFELSLYTTCFLKYPNGKCTCQMNGKKVKIVTYRDRRTSLVATAYPV 196
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Medaka
Match: si:dkey-222f8.3 (poly(U)-specific endoribonuclease-C [Source:NCBI gene;Acc:101170620])

HSP 1 Score: 233.802 bits (595), Expect = 3.406e-75
Identity = 125/272 (45.96%), Postives = 173/272 (63.60%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMY--DRGGFRDSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS--FQIGGYHMDLMHIRKGSHINTSY 898
            Q+L  + N+LW  D NR  PG DY ++LQG+      G+ + RD A A LF+  NE K+ S  TY  F +LLDNYEM    SE VT +ELQEN +F++AI+ T+VMK   ++L++ +     P+  K++L  IWF++Y  DR G  DSCGFEHVFVGE K +Q + GLHNW+Q YLQEK G++DYKG+          E   V+++QF+WK G +KP+G SF+G SPEFE+A FT I L + +   S   ++  Y ++L+  R G  I TSY
Sbjct:    5 QELTEVFNQLWALDSNRLKPGIDYIISLQGKAGYVAPGSNSARDRAHAPLFTYVNEEKLKSIETYA-FINLLDNYEMSTGVSETVTAEELQENRLFIDAIVKTDVMKCAHKYLVRKRQSPSDPAQFKRQLYDIWFKLYHRDRNG-EDSCGFEHVFVGETKYNQEVTGLHNWVQFYLQEKHGHVDYKGYKARQNKDTPDEDDHVLSLQFSWK-GLVKPVGCSFIGVSPEFEVALFTIIFLMSTEKMTSVVVKVDEYVLELVVYRCGRSIATSY 273
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Medaka
Match: endouc (poly(U)-specific endoribonuclease-C [Source:NCBI gene;Acc:101164801])

HSP 1 Score: 210.69 bits (535), Expect = 6.664e-66
Identity = 112/273 (41.03%), Postives = 161/273 (58.97%), Query Frame = 2 
Query:  107 LKQDLQNLLNELWNADFNRCIPGQDYALNLQGRL----TGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYD--RGGFRDSCGFEHVFVGELK-GDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKS--FQIGGYHMDLMHIRKGSHINTSY 898
            + Q+L N+ NELW  D NR  PG DY +++Q +      G+   RD A   LFS  +E K+    T+ L   LLDNYE   S SE  T +E+ E ++FL+A+L T+VMK   ++L+         ++ K +LN IWF +Y+  R    DSCGFEHVFVGE + G +I G HNW+Q YLQEK  ++DYKGF      +      V+ +QF+W  G +KP+GS+F+GTSPEFE+A FT + L N +        I    ++L+ +R G+ I T++
Sbjct:   24 VNQELSNIFNELWRLDLNRMTPGIDYNISVQNKAGFVTQGSTVVRDQAPQPLFSSVDEDKMKRTTTFFLLMKLLDNYERSASVSEQYTPEEITEISLFLDAVLETQVMKRAHKYLVSKGKSSSDLTTFKNQLNWIWFHLYNRQRDTGPDSCGFEHVFVGETRTGSEIAGFHNWVQFYLQEKNTHLDYKGFKAGHQDSPDSDDHVLNLQFSWH-GAVKPVGSAFIGTSPEFEMAVFTIVFLMNTERSTKVVVDIDQCQLELLVVRHGNSIGTAF 295
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Medaka
Match: endou2 (poly(U)-specific endoribonuclease-B [Source:NCBI gene;Acc:101167888])

HSP 1 Score: 206.453 bits (524), Expect = 1.480e-64
Identity = 112/269 (41.64%), Postives = 166/269 (61.71%), Query Frame = 2 
Query:  113 QDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDL--AQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFR--DSCGFEHVFVGELKGDQ-IIGLHNWIQIYLQEKKGNIDYKGF-FEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLM-HIRKGSHINTSY 898
            ++L  ++ ELW+ D NR  PG+DY ++LQG+   +    D+  A + LF+  NE  IF K T+  F  LLDNYE +    E VT +E  EN+ FL++I+ T+ MKI  ++L++ +L     +  K++L +IWFE+Y R G    DS GFEHVFVGE +G + +IG HNWIQ+YLQEK G+IDYKG+     +    E+  ++ +QF+WK+G IKP GS F+G SPEFE A +T   L + +     Q   Y ++++ H     HI T++
Sbjct:    6 RELSAMVQELWDNDINRLTPGKDYRISLQGKAGDSMGTSDIDRAGSPLFTFVNEN-IFKKETFLAFISLLDNYESDTGVPEIVTPEEEAENHKFLDSIVQTQTMKIAHKYLVEKKLSPENETEFKEQLYRIWFELYARRGSSRPDSSGFEHVFVGETRGGRTVIGFHNWIQLYLQEKLGHIDYKGYSVNANSPQPDENKHILGLQFSWKNG-IKPKGSIFIGVSPEFEFALYTLCFLTSPNERVKVQFSLYDVEIVCHHYNQKHIGTTF 272
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Medaka
Match: endou (endonuclease, poly(U) specific [Source:NCBI gene;Acc:101159794])

HSP 1 Score: 147.132 bits (370), Expect = 1.395e-41
Identity = 90/253 (35.57%), Postives = 134/253 (52.96%), Query Frame = 2 
Query:   98 MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGR--DLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFL-EAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR-GGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGG 844
            M     +++ +   L+  D N+    Q   ++ Q  +  ++T    DL+ + L+S  +E  +FSKPTY  F  LLDNY      +E+ T Q+L E + FL E + NTEV K L  FL          +   Q+L  +WF +Y R  G  DS GFEH+F GE+KG ++ G HNWIQ YL EKKG ++Y      G    +  P V+ +QF WK G  K +GS+ +G SPEF+ A ++  ++     +    +GG
Sbjct:   12 MLATDAEIKAVSETLYTLDSNKASASQ-LKIDPQALVADSQTSSQTDLSSSRLYSYLDEGTLFSKPTYAAFLALLDNYNWMTGTTESFTSQQLAEQDTFLKETMSNTEVGKELFAFLYTKGYY-ASEAEFIQDLKNMWFGLYSRYNGKMDSSGFEHIFSGEIKGGKVSGFHNWIQFYLLEKKGELNYYSHSFDGP--WTSYPDVLGMQFMWK-GYYKQVGSAIIGCSPEFDFALYSLCYITRPGKQCRLSLGG 259
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Medaka
Match: endou (endonuclease, poly(U) specific [Source:NCBI gene;Acc:101159794])

HSP 1 Score: 147.517 bits (371), Expect = 8.853e-41
Identity = 93/269 (34.57%), Postives = 137/269 (50.93%), Query Frame = 2 
Query:   50 NNCCXXXXXXXXXXXXMHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGR--DLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFL-EAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDR-GGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGG 844
            NNCC                  +++ +   L+  D N+    Q   ++ Q  +  ++T    DL+ + L+S  +E  +FSKPTY  F  LLDNY      +E+ T Q+L E + FL E + NTEV K L  FL          +   Q+L  +WF +Y R  G  DS GFEH+F GE+KG ++ G HNWIQ YL EKKG ++Y      G    +  P V+ +QF WK G  K +GS+ +G SPEF+ A ++  ++     +    +GG
Sbjct:   90 NNCCSDYSQFCDSKGS--ATDAEIKAVSETLYTLDSNKASASQ-LKIDPQALVADSQTSSQTDLSSSRLYSYLDEGTLFSKPTYAAFLALLDNYNWMTGTTESFTSQQLAEQDTFLKETMSNTEVGKELFAFLYTKGYY-ASEAEFIQDLKNMWFGLYSRYNGKMDSSGFEHIFSGEIKGGKVSGFHNWIQFYLLEKKGELNYYSHSFDGP--WTSYPDVLGMQFMWK-GYYKQVGSAIIGCSPEFDFALYSLCYITRPGKQCRLSLGG 351
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Planmine SMEST
Match: SMESG000018876.1 (SMESG000018876.1)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 270/272 (99.26%), Postives = 270/272 (99.26%), Query Frame = 2 
Query:   98 MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSYIIGLD 913
            MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEV FSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIK LGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSYIIGLD
Sbjct:    1 MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVGFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKSLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSYIIGLD 272
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Planmine SMEST
Match: SMESG000018877.1 (SMESG000018877.1)

HSP 1 Score: 349.747 bits (896), Expect = 4.193e-121
Identity = 162/272 (59.56%), Postives = 208/272 (76.47%), Query Frame = 2 
Query:   98 MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSYIIGLD 913
            M++  +DL+NL+N LW  D N+C P  DY+LNLQG+L     G+D+A+ +LF MF+E ++F++PTYKLF  LLDNYEM+    + VT QE  EN+ F+ +I  T+V+K+L +FLI HQLI P     K+EL KIWF++Y R    DS GFEHVFVGELK DQIIGLHNW+QIYLQEK GNI+Y GFFE GTSNES +P+++TIQFTWKDG+ KPLGSSF+GTSPEFEIAFFTA+H CN D +  FQ+G Y+++L+H +K   I +SYI GLD
Sbjct:    1 MNISHKDLENLINNLWTNDENKCTPEIDYSLNLQGKLKSFSVGQDMAKNNLFQMFDENRVFNRPTYKLFKKLLDNYEMQTGVLDVVTNQERNENDEFINSIFKTKVIKLLHQFLINHQLISPNIEDFKRELKKIWFDIYKRSNVPDSSGFEHVFVGELKDDQIIGLHNWLQIYLQEKMGNINYHGFFEHGTSNESGNPRIITIQFTWKDGQTKPLGSSFIGTSPEFEIAFFTALHFCNPDPKSVFQMGPYNLNLIHYKKQDRIASSYIKGLD 272
[Close]
BLAST of Poly(U)-specific endoribonuclease-C vs. Planmine SMEST
Match: SMESG000018877.1 (SMESG000018877.1)

HSP 1 Score: 350.132 bits (897), Expect = 7.041e-121
Identity = 162/272 (59.56%), Postives = 208/272 (76.47%), Query Frame = 2 
Query:   98 MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQASLFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEAILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGFEHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQVVTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGYHMDLMHIRKGSHINTSYIIGLD 913
            M++  +DL+NL+N LW  D N+C P  DY+LNLQG+L     G+D+A+ +LF MF+E ++F++PTYKLF  LLDNYEM+    + VT QE  EN+ F+ +I  T+V+K+L +FLI HQLI P     K+EL KIWF++Y R    DS GFEHVFVGELK DQIIGLHNW+QIYLQEK GNI+Y GFFE GTSNES +P+++TIQFTWKDG+ KPLGSSF+GTSPEFEIAFFTA+H CN D +  FQ+G Y+++L+H +K   I +SYI GLD
Sbjct:   29 MNISHKDLENLINNLWTNDENKCTPEIDYSLNLQGKLKSFSVGQDMAKNNLFQMFDENRVFNRPTYKLFKKLLDNYEMQTGVLDVVTNQERNENDEFINSIFKTKVIKLLHQFLINHQLISPNIEDFKRELKKIWFDIYKRSNVPDSSGFEHVFVGELKDDQIIGLHNWLQIYLQEKMGNINYHGFFEHGTSNESGNPRIITIQFTWKDGQTKPLGSSFIGTSPEFEIAFFTALHFCNPDPKSVFQMGPYNLNLIHYKKQDRIASSYIKGLD 300
The following BLAST results are available for this feature:
BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENDOU4.783e-4834.94endonuclease, poly(U) specific [Source:HGNC Symbol... [more]
ENDOU6.594e-4834.94endonuclease, poly(U) specific [Source:HGNC Symbol... [more]
ENDOU1.479e-4734.94endonuclease, poly(U) specific [Source:HGNC Symbol... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
endu-14.158e-3636.67Poly(U)-specific endoribonuclease homolog [Source... [more]
endu-24.905e-1828.69ENDonuclease, poly(U) specific [Source:UniProtKB/... [more]
endu-24.905e-1828.69ENDonuclease, poly(U) specific [Source:UniProtKB/... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
EndoU3.560e-3634.96gene:FBgn0038381 transcript:FBtr0083200[more]
CG21456.951e-3436.94gene:FBgn0030251 transcript:FBtr0343591[more]
CG21456.951e-3436.94gene:FBgn0030251 transcript:FBtr0073387[more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:dkey-222f8.31.105e-7545.65si:dkey-222f8.3 [Source:ZFIN;Acc:ZDB-GENE-030131-3... [more]
endou22.313e-6342.28endonuclease, polyU-specific 2 [Source:NCBI gene;A... [more]
endou22.313e-6342.28endonuclease, polyU-specific 2 [Source:NCBI gene;A... [more]
endou22.313e-6342.28endonuclease, polyU-specific 2 [Source:NCBI gene;A... [more]
endouc7.201e-6341.24endonuclease, polyU-specific C [Source:NCBI gene;A... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
gclc8.100e-7644.64glutamate-cysteine ligase, catalytic subunit [Sour... [more]
gclc3.770e-7544.64glutamate-cysteine ligase, catalytic subunit [Sour... [more]
ENSXETT00000003055.12.493e-4836.36endonuclease, poly(U) specific like 2 [Source:NCBI... [more]
ENDOU1.274e-3935.18endonuclease, poly(U) specific [Source:NCBI gene;A... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Endou1.483e-4738.04endonuclease, polyU-specific [Source:MGI Symbol;Ac... [more]
Endou6.405e-4738.04endonuclease, polyU-specific [Source:MGI Symbol;Ac... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|B1H3D5|ENDOU_XENTR4.291e-7544.64Poly(U)-specific endoribonuclease OS=Xenopus tropi... [more]
sp|Q8JFY9|ENDUA_XENLA1.345e-7343.88Poly(U)-specific endoribonuclease-A OS=Xenopus lae... [more]
sp|B1WBB4|ENDUB_XENLA1.456e-7243.43Poly(U)-specific endoribonuclease-B OS=Xenopus lae... [more]
sp|Q503V9|ENDUB_DANRE1.585e-6241.97Poly(U)-specific endoribonuclease-B OS=Danio rerio... [more]
sp|Q1LUM3|ENDUC_DANRE5.436e-6241.24Poly(U)-specific endoribonuclease-C OS=Danio rerio... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A498MHW12.056e-7746.59Poly(U)-specific endoribonuclease-C-like protein O... [more]
A0A4W4GJE55.346e-7747.45XendoU domain-containing protein OS=Electrophorus ... [more]
A0A3N0XDF27.714e-7747.83Poly(U)-specific endoribonuclease-C OS=Anabarilius... [more]
A0A553N0H01.416e-7647.10XendoU domain-containing protein OS=Danionella tra... [more]
A0A1S3M0U22.335e-7646.72poly(U)-specific endoribonuclease-C-like isoform X... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:dkey-222f8.37.501e-7645.99poly(U)-specific endoribonuclease-C-like [Source:N... [more]
si:dkey-222f8.31.289e-7546.49poly(U)-specific endoribonuclease-C-like [Source:N... [more]
endouc1.695e-6841.97poly(U)-specific endoribonuclease-C-like [Source:N... [more]
endou22.659e-6441.54poly(U)-specific endoribonuclease-B [Source:NCBI g... [more]
endou22.659e-6441.54poly(U)-specific endoribonuclease-B [Source:NCBI g... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSPMAT00000003317.12.259e-7443.42pep scaffold:Pmarinus_7.0:GL476561:262239:267700:-... [more]
ENSPMAT00000000697.11.551e-6942.55pep scaffold:Pmarinus_7.0:GL477040:332119:350135:1... [more]
endou4.427e-1633.04endonuclease, polyU-specific [Source:NCBI gene;Acc... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO430821.828e-4535.14Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO306922.292e-4433.94Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO431416.016e-2733.17Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:dkey-222f8.33.406e-7545.96poly(U)-specific endoribonuclease-C [Source:NCBI g... [more]
endouc6.664e-6641.03poly(U)-specific endoribonuclease-C [Source:NCBI g... [more]
endou21.480e-6441.64poly(U)-specific endoribonuclease-B [Source:NCBI g... [more]
endou1.395e-4135.57endonuclease, poly(U) specific [Source:NCBI gene;A... [more]
endou8.853e-4134.57endonuclease, poly(U) specific [Source:NCBI gene;A... [more]
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BLAST of Poly(U)-specific endoribonuclease-C vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000018876.10.000e+099.26SMESG000018876.1[more]
SMESG000018877.14.193e-12159.56SMESG000018877.1[more]
SMESG000018877.17.041e-12159.56SMESG000018877.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30014765 ID=SMED30014765|Name=Poly(U)-specific endoribonuclease-C|organism=Schmidtea mediterranea sexual|type=transcript|length=1002bp
CTTGAATTAACAATTTTACTCTATAACATACTTTCACAATATCCACACAA
ATAATTGCTGTTAGATTATAAAATCTCCAAAAAAAATTATAGAAAAAATG
CATGTTTTAAAACAAGATTTACAAAATTTGCTAAATGAATTATGGAACGC
TGATTTCAATCGATGCATTCCCGGACAAGATTATGCTCTAAATTTACAAG
GCCGACTGACAGGTACAAGAACTGGTCGAGATCTCGCCCAAGCCTCCCTG
TTTTCTATGTTTAACGAAAGGAAAATATTTTCTAAGCCAACATATAAATT
ATTTACGGATTTGCTGGATAACTATGAAATGGAAGTTAGTTTCAGTGAAA
ATGTAACCAAGCAAGAACTACAAGAAAATAATGTATTTTTAGAAGCAATC
CTAAACACCGAAGTTATGAAAATTCTTCAAAGATTTTTAATCAAACATCA
ATTAATCAGACCTGGACCAAGCTCTCTTAAACAGGAGCTCAATAAAATTT
GGTTTGAAATGTATGATCGTGGAGGTTTTCGAGATTCGTGTGGCTTTGAA
CATGTTTTCGTTGGAGAACTAAAGGGTGATCAGATAATAGGACTCCATAA
TTGGATTCAAATCTATCTTCAAGAAAAGAAAGGAAATATTGATTACAAAG
GGTTTTTTGAATTCGGAACTTCTAATGAATCAGAAAGTCCTCAAGTTGTG
ACAATACAATTTACATGGAAAGATGGTCGAATAAAACCCTTGGGTAGTTC
GTTTGTTGGAACTTCTCCTGAATTTGAAATTGCATTTTTTACTGCCATTC
ATTTATGCAATGTAGATAATGAGAAGTCCTTTCAAATTGGTGGGTACCAC
ATGGATTTGATGCATATTAGAAAGGGCAGTCACATTAATACTTCTTACAT
AATTGGCTTAGATTAATTCCCAAACTTTGAATGATTTTGGTTTATTTTTT
GGTAATTGAATAATATTTTTTAATCAAATTTGTTTAAAATAAAATATTTT
CT
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protein sequence of SMED30014765-orf-1

>SMED30014765-orf-1 ID=SMED30014765-orf-1|Name=SMED30014765-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=273bp
MHVLKQDLQNLLNELWNADFNRCIPGQDYALNLQGRLTGTRTGRDLAQAS
LFSMFNERKIFSKPTYKLFTDLLDNYEMEVSFSENVTKQELQENNVFLEA
ILNTEVMKILQRFLIKHQLIRPGPSSLKQELNKIWFEMYDRGGFRDSCGF
EHVFVGELKGDQIIGLHNWIQIYLQEKKGNIDYKGFFEFGTSNESESPQV
VTIQFTWKDGRIKPLGSSFVGTSPEFEIAFFTAIHLCNVDNEKSFQIGGY
HMDLMHIRKGSHINTSYIIGLD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000018Category 4 cell
PLANA:0000420parapharyngeal region
Vocabulary: INTERPRO
TermDefinition
IPR039787ENDOU
IPR037227EndoU-like
IPR018998EndoU_C
Vocabulary: molecular function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO:0003723RNA binding
GO:0004518nuclease activity
GO:0004519endonuclease activity
GO:0004521endoribonuclease activity
GO:0016787hydrolase activity
GO:0046872metal ion binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
Vocabulary: biological process
TermDefinition
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018998EndoU ribonuclease, C-terminalPFAMPF09412XendoUcoord: 6..267
e-value: 5.0E-87
score: 291.5
NoneNo IPR availablePANTHERPTHR12439:SF36coord: 3..267
IPR039787Poly(U)-specific endoribonucleasePANTHERPTHR12439PLACENTAL PROTEIN 11-RELATEDcoord: 3..267
IPR037227Endoribonuclease EndoU-likeSUPERFAMILYSSF142877EndoU-likecoord: 4..267