DNA mismatch repair protein PMS2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30014562 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Human
Match: PMS2 (PMS1 homolog 2, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9122]) HSP 1 Score: 251.906 bits (642), Expect = 7.987e-69 Identity = 135/350 (38.57%), Postives = 209/350 (59.71%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ ++ +ICS Q V+S++ A+KEL+ENSLDA + I+++LK++G D+IEV DNG G+ F+ T ++ TSK++ F DL +ETFGFRGEAL+SLC L +GTTVS++ +F TLPVR K+F N+K+E+ K + + +YC+I G+++SC ++ + K Q ++ T G I ENI SVFGQ QL +I + + + +E+ +S L + +SG+ISQ T S++ +QF ++NRRPC+ KV RL+ E Y + N+ P V++IS+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFV-QLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 363 HSP 2 Score: 176.022 bits (445), Expect = 4.251e-44 Identity = 89/240 (37.08%), Postives = 140/240 (58.33%), Query Frame = 2 Query: 1253 ISANFSM----KYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 + +FSM K I L A+ K++++I N+ AE+EL++ K F ++E+IGQFN GFII +LN+D+FI+DQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RV+ AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 616 VPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMC--RPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Human
Match: PMS2 (PMS1 homolog 2, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9122]) HSP 1 Score: 176.407 bits (446), Expect = 1.406e-46 Identity = 92/226 (40.71%), Postives = 137/226 (60.62%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMI 625 IK I+ ++ +ICS Q V+S++ A+KEL+ENSLDA + I+++LK++G D+IEV DNG G+ F+ T ++ TSK++ F DL +ETFGFRGEAL+SLC L +GTTVS++ +F TLPVR K+F N+K+E+ K + + +YC+I G+++SC ++ + K Q ++ T G I ENI SVFGQ QL +I Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLI 240 HSP 2 Score: 163.696 bits (413), Expect = 2.631e-42 Identity = 77/197 (39.09%), Postives = 120/197 (60.91%), Query Frame = 2 Query: 1370 TAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 + + L +F K F ++E+IGQFN GFII +LN+D+FI+DQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RV+ AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 258 SCSDALHNLFYKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMC--RPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 452
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Human
Match: PMS2 (PMS1 homolog 2, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9122]) HSP 1 Score: 175.637 bits (444), Expect = 1.639e-44 Identity = 89/240 (37.08%), Postives = 140/240 (58.33%), Query Frame = 2 Query: 1253 ISANFSM----KYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 + +FSM K I L A+ K++++I N+ AE+EL++ K F ++E+IGQFN GFII +LN+D+FI+DQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RV+ AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 481 VPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMC--RPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 718 HSP 2 Score: 158.303 bits (399), Expect = 6.027e-39 Identity = 84/228 (36.84%), Postives = 137/228 (60.09%), Query Frame = 2 Query: 320 FGFRGEALNSLCFLGQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 F G+ + + +GTTVS++ +F TLPVR K+F N+K+E+ K + + +YC+I G+++SC ++ + K Q ++ T G I ENI SVFGQ QL +I + + + +E+ +S L + +SG+ISQ T S++ +QF ++NRRPC+ KV RL+ E Y + N+ P V++IS+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 2 FDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFV-QLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 228
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Human
Match: PMS2 (PMS1 homolog 2, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9122]) HSP 1 Score: 175.637 bits (444), Expect = 1.639e-44 Identity = 89/240 (37.08%), Postives = 140/240 (58.33%), Query Frame = 2 Query: 1253 ISANFSM----KYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 + +FSM K I L A+ K++++I N+ AE+EL++ K F ++E+IGQFN GFII +LN+D+FI+DQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RV+ AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 481 VPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMC--RPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 718 HSP 2 Score: 158.303 bits (399), Expect = 6.027e-39 Identity = 84/228 (36.84%), Postives = 137/228 (60.09%), Query Frame = 2 Query: 320 FGFRGEALNSLCFLGQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 F G+ + + +GTTVS++ +F TLPVR K+F N+K+E+ K + + +YC+I G+++SC ++ + K Q ++ T G I ENI SVFGQ QL +I + + + +E+ +S L + +SG+ISQ T S++ +QF ++NRRPC+ KV RL+ E Y + N+ P V++IS+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 2 FDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFV-QLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 228
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Human
Match: PMS2 (PMS1 homolog 2, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9122]) HSP 1 Score: 175.637 bits (444), Expect = 2.085e-44 Identity = 89/240 (37.08%), Postives = 140/240 (58.33%), Query Frame = 2 Query: 1253 ISANFSM----KYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 + +FSM K I L A+ K++++I N+ AE+EL++ K F ++E+IGQFN GFII +LN+D+FI+DQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RV+ AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 510 VPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMC--RPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 747 HSP 2 Score: 158.303 bits (399), Expect = 7.315e-39 Identity = 84/228 (36.84%), Postives = 137/228 (60.09%), Query Frame = 2 Query: 320 FGFRGEALNSLCFLGQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 F G+ + + +GTTVS++ +F TLPVR K+F N+K+E+ K + + +YC+I G+++SC ++ + K Q ++ T G I ENI SVFGQ QL +I + + + +E+ +S L + +SG+ISQ T S++ +QF ++NRRPC+ KV RL+ E Y + N+ P V++IS+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 31 FDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFV-QLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 257
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Celegans
Match: pms-2 (PMS (Post Meiotic Segregation) family [Source:UniProtKB/TrEMBL;Acc:G5EFG5]) HSP 1 Score: 203.756 bits (517), Expect = 8.784e-54 Identity = 120/369 (32.52%), Postives = 196/369 (53.12%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKI--DKNKQVILSTRGIGGISENIKSVFG------------------QNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLK 1000 I+RI+ + ++R+ ++Q VVS+++AI++LI+NS+DA S I+IR+KN G + IEV DNG+GI FD ++TSKL F D + L T GFRGEALN+LC + + GTT+ + +F TLPVRRK+ + KREF K L+ + S+ L+C ++I C K +I + G I + + ++FG QNQ + +E+ T H++ + + F++ K+ G++S S +QF+Y+N RP E +V +I + Y+ NK P V+ I +P E +DVN+ PDK+ ++L+ + + AV++AS++ +LK Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSGIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGTRLTYDHSGNIICRQSAARELGTTIIVNKLFETLPVRRKELERSQKREFVKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIARKIENSKIGSGLIPIQQNQPD--VEIMTIHSVPMEEMHFFDLFKI--------RGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYLK 364 HSP 2 Score: 182.185 bits (461), Expect = 9.032e-47 Identity = 92/224 (41.07%), Postives = 131/224 (58.48%), Query Frame = 2 Query: 1292 DTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCL 1963 + +AE D+ N K I+ N AE +L R K F+ +++IGQFN GFII RL LFI+DQHASDEK FE+ + +++ QPL P L + E II EN+ +F+ GF F+F E + + F+TA P N L DL E+L ++ Y + + P+R+R AS ACR ++MIG L+ +M +I++ ++ L PW C HGRPTIRHL L Sbjct: 580 EVSAEKDVLNEITTK----INKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEFSENDGCIKTFLTARPELLNQQLTNSDLEEILAVVSQYPNQ-MYRPVRIRKIFASKACRKSVMIGKPLNQREMTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Celegans
Match: mlh-1 (MLH (MutL Homolog) family [Source:UniProtKB/TrEMBL;Acc:Q9XU10]) HSP 1 Score: 91.6633 bits (226), Expect = 2.232e-18 Identity = 79/331 (23.87%), Postives = 149/331 (45.02%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLC---------------------FL------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQP-----TEVFKSSNSSKQF--LYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDK 925 I+R+ R+ + + + AIKEL+ENSLDA + +I + ++N G +++V DNG GI +F R TSKL+ F+DL +++T+GFRGEAL SL FL G+ GT ++ ++F+ LP RR + + E + + + + V + + +N+ T+G G + + ++ G++ + ++ L+ N +++ K +G IS+P + ++ +S+ F +++N R +K I E + H + + + + +DVN+ P K Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKGIEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRRNK-MTTHGEEAKMVNDTLLRFAIHRPDVSFA---LRQNQAGDFRTKGDGNFRDVVCNLLGRDVADTILPLS------------LNSTRL----KFTFTGHISKPIASATAAIAQNRKTSRSFFSVFINGRSVRCDILKHPIDEVLGA-RQLHAQFCALHLQIDETRIDVNVHPTK 313
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Fly
Match: Pms2 (gene:FBgn0011660 transcript:FBtr0087388) HSP 1 Score: 197.978 bits (502), Expect = 2.052e-51 Identity = 121/354 (34.18%), Postives = 179/354 (50.56%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL--------------GQK-------------------GTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKN--KQVILSTRGIGGISENIKSVFGQNQLNGMIELT--------TEHNINQDILDEFNISKVA------------NLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQ 949 IK I T +ICS Q V+S+A A+KEL+ENS+DA + +EI+LK+ G +EV DNG+G+ + T++ TSK+ F DL +ETFGFRGEAL+SLC L G K GTTV + N+F TLPVRR+ F N+K+EF K + +YCL+ +GV+I C K ++L T G + NI ++FG Q ++ L TE + D+ +++ N +L G+IS S+ +QF +VN RPC+ + +++ E Y N P ++I + VDVN+ PDKR LL++N+ Sbjct: 27 IKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGSGVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGVKVELDHEGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCLVTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPFGQGQLTEAELRADLESGADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNE 380 HSP 2 Score: 183.726 bits (465), Expect = 7.268e-47 Identity = 87/209 (41.63%), Postives = 132/209 (63.16%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSY-VQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 ++K+EI+ N N +AE EL+R K+ F +E+IGQFN GFII +L DLFI+DQHA+DEK FE ++ Q LA P+ L++++ +E ++ +ID+F K GF+F+ EA ++ + P G ED+ E++ +++D I P RVR+ AS ACR ++MIGT+LS M +++ QM ++ PW C HGRPT+RHL Sbjct: 672 RFKTEINPNQNTSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQLEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 880
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Fly
Match: Mlh1 (gene:FBgn0011659 transcript:FBtr0088790) HSP 1 Score: 122.094 bits (305), Expect = 6.598e-28 Identity = 96/357 (26.89%), Postives = 165/357 (46.22%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRV-MNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEY 1021 I++++ RI + + + A A+KEL+ENSLDA S I++++K G ++++ DNGTGI + R TTSKL F+DL+ + TFGFRGEAL S+ + G +GT + I ++F+ +P RR Q L + EF + + Y + V + K + Q L T SENI+ ++G I++++L+ S + K E I+Q V S+ + L++N+R E ++ + Y + + H+P +S++LP + +DVN+ P K + Q E+ IK + + L S ++ + Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRR-QALRSPAEEFQRLSEVLARYAVHNPRVGFTLRK-QGDAQPALRTPVASSRSENIRIIYGA-------------AISKELLE---FSHRDEVYKFEAECLITQ---VNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTF 345
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Fly
Match: Mlh1 (gene:FBgn0011659 transcript:FBtr0331379) HSP 1 Score: 120.168 bits (300), Expect = 3.156e-27 Identity = 95/356 (26.69%), Postives = 164/356 (46.07%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEY 1021 I++++ RI + + + A A+KEL+ENSLDA S I++++K G ++++ DNGTGI + R TTSKL F+DL+ + TFGFRGEAL S+ + G +GT + I ++F+ +P RR Q L + EF + + Y + V + K + Q L T SENI+ ++G I++++L+ S + K E I+Q V S+ + L++N+R E + + + + + H+P +S++LP + +DVN+ P K + Q E+ IK + + L S ++ + Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRR-QALRSPAEEFQRLSEVLARYAVHNPRVGFTLRK-QGDAQPALRTPVASSRSENIRIIYGA-------------AISKELLE---FSHRDEVYKFEAECLITQ---VNYSAKKCQMLLFINQRLVESTGLTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTF 344
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Zebrafish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 232.261 bits (591), Expect = 6.064e-64 Identity = 122/350 (34.86%), Postives = 207/350 (59.14%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ-VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ Q+ +ICS Q V+S+A A+KEL+ENS+DA + ++++LK+ G +++EV DNG G+ ++ T ++ TSKL+ F DL ++ETFGFRGEAL+SLC L Q GTTV+++ +F TLPVR K+F N+K+E+ K + + SYC+I GV+I+C ++ + K+ +L T G + +NI +VFG QL +I + + N + +++ + V + + + G++SQ S + +QF ++N+RPC+ KV +L+ E Y + N+ P ++I++ + VDVN+ PDKR +LL + + A++K+S+++ F Sbjct: 30 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKGVEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVTCHESAQIGARLVYDHDGRLTQCVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFR-QISPNDSVKEDYGLGGVDVPKDLFNIDGFVSQGDHGVGRSATDRQFFFINKRPCDPVKVSKLVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF 378
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Zebrafish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 231.491 bits (589), Expect = 2.058e-62 Identity = 122/350 (34.86%), Postives = 207/350 (59.14%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ-VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ Q+ +ICS Q V+S+A A+KEL+ENS+DA + ++++LK+ G +++EV DNG G+ ++ T ++ TSKL+ F DL ++ETFGFRGEAL+SLC L Q GTTV+++ +F TLPVR K+F N+K+E+ K + + SYC+I GV+I+C ++ + K+ +L T G + +NI +VFG QL +I + + N + +++ + V + + + G++SQ S + +QF ++N+RPC+ KV +L+ E Y + N+ P ++I++ + VDVN+ PDKR +LL + + A++K+S+++ F Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKGVEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVTCHESAQIGARLVYDHDGRLTQCVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFR-QISPNDSVKEDYGLGGVDVPKDLFNIDGFVSQGDHGVGRSATDRQFFFINKRPCDPVKVSKLVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF 360 HSP 2 Score: 176.407 bits (446), Expect = 1.664e-44 Identity = 84/209 (40.19%), Postives = 130/209 (62.20%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ N+TAE+ELK+ K F ++E+IGQFN GFII ++ DLFIIDQHA+DEK FE + Q L P+ L + + E ++ EN+++F K GF F E A++ R+ + ++P N G D+ E++ ++ D G C P RVR AS ACR ++M+GT+L+ +M K++ M ++ PW C HGRPT+RHL Sbjct: 636 RFRAKINPGENQTAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEMLQQNTVLKGQRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLIDEDAQVMDRVKLVSLPTSKNWTFGPNDIEELIFMLSDSPGIMC--RPSRVRQMFASRACRKSVMVGTALNTSEMKKLVLHMGEIEQPWNCPHGRPTMRHL 842
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Zebrafish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 166.392 bits (420), Expect = 2.322e-43 Identity = 88/226 (38.94%), Postives = 136/226 (60.18%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ-VILSTRGIGGISENIKSVFGQNQLNGMI 625 IK I+ Q+ +ICS Q V+S+A A+KEL+ENS+DA + ++++LK+ G +++EV DNG G+ ++ T ++ TSKL+ F DL ++ETFGFRGEAL+SLC L Q GTTV+++ +F TLPVR K+F N+K+E+ K + + SYC+I GV+I+C ++ + K+ +L T G + +NI +VFG QL +I Sbjct: 20 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKGVEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVTCHESAQIGARLVYDHDGRLTQCVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLI 245 HSP 2 Score: 162.54 bits (410), Expect = 5.178e-42 Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 2 Query: 1388 KRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 K +F K F ++E+IGQFN GFII ++ DLFIIDQHA+DEK FE + Q L P+ L + + E ++ EN+++F K GF F E A++ R+ + ++P N G D+ E++ ++ D G C P RVR AS ACR ++M+GT+L+ +M K++ M ++ PW C HGRPT+RHL Sbjct: 269 KDLFNKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEMLQQNTVLKGQRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLIDEDAQVMDRVKLVSLPTSKNWTFGPNDIEELIFMLSDSPGIMC--RPSRVRQMFASRACRKSVMVGTALNTSEMKKLVLHMGEIEQPWNCPHGRPTMRHL 457
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Zebrafish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 162.925 bits (411), Expect = 3.656e-40 Identity = 113/366 (30.87%), Postives = 178/366 (48.63%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLC----------------------------------FLGQKGTTVSIRNIFHTLPVRRKQFLGNLKR---EFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVF---KSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHN------PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYS 1012 +K + +T + +CSSQ + S+ +KELIENSLDA S +E++L+N+G D IEV DNG+GI + ++ TSK+ +DL LET+GFRGEAL S+C LGQ GTTV N+F LPVRR Q+ N K+ E + N + +Y +I ++++ + NK V+ + + +V G + M L +H+ Q +I + G+ +P SS + K F++VN RP ++ +LI + Y PTF+++I++P TVDVN+ PDK ++L N+ EV ++ ++S + GYS Sbjct: 1 MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQYSVDHNGQIVSQKPSHLGQ-GTTVCAANLFKNLPVRR-QYYSNTKKCKDELKRVQNLLMAYAVIKPELRVT---LSHNKAVVWQKSRVSDHRTALMAVLGAASVANM--LPVQHHQEQ--------------PEIHIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLY---GYS 342
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Zebrafish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 162.925 bits (411), Expect = 3.721e-40 Identity = 113/366 (30.87%), Postives = 178/366 (48.63%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLC----------------------------------FLGQKGTTVSIRNIFHTLPVRRKQFLGNLKR---EFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVF---KSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHN------PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYS 1012 +K + +T + +CSSQ + S+ +KELIENSLDA S +E++L+N+G D IEV DNG+GI + ++ TSK+ +DL LET+GFRGEAL S+C LGQ GTTV N+F LPVRR Q+ N K+ E + N + +Y +I ++++ + NK V+ + + +V G + M L +H+ Q +I + G+ +P SS + K F++VN RP ++ +LI + Y PTF+++I++P TVDVN+ PDK ++L N+ EV ++ ++S + GYS Sbjct: 1 MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQYSVDHNGQIVSQKPSHLGQ-GTTVCAANLFKNLPVRR-QYYSNTKKCKDELKRVQNLLMAYAVIKPELRVT---LSHNKAVVWQKSRVSDHRTALMAVLGAASVANM--LPVQHHQEQ--------------PEIHIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLY---GYS 342
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Xenopus
Match: prph2 (peripherin 2 (retinal degeneration, slow) [Source:Xenbase;Acc:XB-GENE-985594]) HSP 1 Score: 229.95 bits (585), Expect = 6.362e-62 Identity = 125/329 (37.99%), Postives = 197/329 (59.88%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ--VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFN-ISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKR 928 IK I+ ++ +ICS Q V+S+A A+KEL+ENS+DA + I+I+LK +GA+ IEV DNG G+ + F+ T ++ TSKL++F DL ++ETFGFRGEAL+SLC L Q+GTTVSI+ +F+TLPVR K+F NLK+EF K + + +YC+I GV+I+C ++ + K+ V+ S+ + ENI +VFGQ QL +I + ++ + +E+ I + +SG+IS+ S++ +QF ++N+RPC+ KV +++ E Y + N+ P V++I + E VD+N+ PDKR Sbjct: 13 IKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGAESIEVSDNGCGVEENNFEGLTLKHHTSKLQDFSDLISVETFGFRGEALSSLCALSDLSIVTCHKTAKVGTRLVYDHNGKIIQKSPVSRQQGTTVSIQQLFYTLPVRHKEFQRNLKKEFTKMVQVLQAYCIISTGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLIPF-VQLPPSETVCEEYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPAKVSKIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKR 340 HSP 2 Score: 136.346 bits (342), Expect = 9.402e-32 Identity = 71/208 (34.13%), Postives = 112/208 (53.85%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ +N+ AE+EL++ K+ F +E+IGQFN GFII +L+ DLF+IDQHA+DEK FE Q E + LA +++ ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RH+ Sbjct: 646 RFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEML--QQETNWALLA---------------------------------------LYLISLPTSKNWTFGQQDIEELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNVHEMKKLVTHMGEIEHPWNCPHGRPTMRHI 810
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Xenopus
Match: prph2 (peripherin 2 (retinal degeneration, slow) [Source:Xenbase;Acc:XB-GENE-985594]) HSP 1 Score: 230.335 bits (586), Expect = 6.433e-62 Identity = 130/352 (36.93%), Postives = 207/352 (58.81%), Query Frame = 2 Query: 2 NLFKIFYVLN*LINLM------NIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ--VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFN-ISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKR 928 +L KIF L ++++ IK I+ ++ +ICS Q V+S+A A+KEL+ENS+DA + I+I+LK +GA+ IEV DNG G+ + F+ T ++ TSKL++F DL ++ETFGFRGEAL+SLC L Q+GTTVSI+ +F+TLPVR K+F NLK+EF K + + +YC+I GV+I+C ++ + K+ V+ S+ + ENI +VFGQ QL +I + ++ + +E+ I + +SG+IS+ S++ +QF ++N+RPC+ KV +++ E Y + N+ P V++I + E VD+N+ PDKR Sbjct: 7 HLPKIFLSLISVLDMTCSSLAKAIKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGAESIEVSDNGCGVEENNFEGLTLKHHTSKLQDFSDLISVETFGFRGEALSSLCALSDLSIVTCHKTAKVGTRLVYDHNGKIIQKSPVSRQQGTTVSIQQLFYTLPVRHKEFQRNLKKEFTKMVQVLQAYCIISTGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLIPF-VQLPPSETVCEEYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPAKVSKIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKR 357 HSP 2 Score: 182.956 bits (463), Expect = 1.740e-46 Identity = 83/209 (39.71%), Postives = 137/209 (65.55%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ +N+ AE+EL++ K+ F +E+IGQFN GFII +L+ DLF+IDQHA+DEK FE + + Q L P++L +++ +E ++ +N+D+F K GF F F +EA + R+ + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RH+ Sbjct: 629 RFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEMLQQETVLQGQRLIAPQKLHLTAVNETVLIDNLDIFKKNGFDFIFDEEAPITERVKLISLPTSKNWTFGQQDIEELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNVHEMKKLVTHMGEIEHPWNCPHGRPTMRHI 835
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Xenopus
Match: prph2 (peripherin 2 (retinal degeneration, slow) [Source:Xenbase;Acc:XB-GENE-985594]) HSP 1 Score: 229.95 bits (585), Expect = 1.011e-61 Identity = 125/329 (37.99%), Postives = 197/329 (59.88%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ--VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFN-ISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKR 928 IK I+ ++ +ICS Q V+S+A A+KEL+ENS+DA + I+I+LK +GA+ IEV DNG G+ + F+ T ++ TSKL++F DL ++ETFGFRGEAL+SLC L Q+GTTVSI+ +F+TLPVR K+F NLK+EF K + + +YC+I GV+I+C ++ + K+ V+ S+ + ENI +VFGQ QL +I + ++ + +E+ I + +SG+IS+ S++ +QF ++N+RPC+ KV +++ E Y + N+ P V++I + E VD+N+ PDKR Sbjct: 15 IKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGAESIEVSDNGCGVEENNFEGLTLKHHTSKLQDFSDLISVETFGFRGEALSSLCALSDLSIVTCHKTAKVGTRLVYDHNGKIIQKSPVSRQQGTTVSIQQLFYTLPVRHKEFQRNLKKEFTKMVQVLQAYCIISTGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLIPF-VQLPPSETVCEEYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPAKVSKIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKR 342 HSP 2 Score: 182.956 bits (463), Expect = 2.103e-46 Identity = 83/209 (39.71%), Postives = 137/209 (65.55%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ +N+ AE+EL++ K+ F +E+IGQFN GFII +L+ DLF+IDQHA+DEK FE + + Q L P++L +++ +E ++ +N+D+F K GF F F +EA + R+ + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RH+ Sbjct: 633 RFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEMLQQETVLQGQRLIAPQKLHLTAVNETVLIDNLDIFKKNGFDFIFDEEAPITERVKLISLPTSKNWTFGQQDIEELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNVHEMKKLVTHMGEIEHPWNCPHGRPTMRHI 839
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Xenopus
Match: prph2 (peripherin 2 (retinal degeneration, slow) [Source:Xenbase;Acc:XB-GENE-985594]) HSP 1 Score: 229.565 bits (584), Expect = 1.209e-61 Identity = 125/329 (37.99%), Postives = 197/329 (59.88%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ--VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFN-ISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKR 928 IK I+ ++ +ICS Q V+S+A A+KEL+ENS+DA + I+I+LK +GA+ IEV DNG G+ + F+ T ++ TSKL++F DL ++ETFGFRGEAL+SLC L Q+GTTVSI+ +F+TLPVR K+F NLK+EF K + + +YC+I GV+I+C ++ + K+ V+ S+ + ENI +VFGQ QL +I + ++ + +E+ I + +SG+IS+ S++ +QF ++N+RPC+ KV +++ E Y + N+ P V++I + E VD+N+ PDKR Sbjct: 13 IKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGAESIEVSDNGCGVEENNFEGLTLKHHTSKLQDFSDLISVETFGFRGEALSSLCALSDLSIVTCHKTAKVGTRLVYDHNGKIIQKSPVSRQQGTTVSIQQLFYTLPVRHKEFQRNLKKEFTKMVQVLQAYCIISTGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLIPF-VQLPPSETVCEEYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPAKVSKIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKR 340 HSP 2 Score: 169.474 bits (428), Expect = 3.647e-42 Identity = 83/209 (39.71%), Postives = 135/209 (64.59%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ +N+ AE+EL++ K+ F +E+IGQFN GFII +L+ DLF+IDQHA+DEK FE Q E + L +L +++ +E ++ +N+D+F K GF F F +EA + R+ + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RH+ Sbjct: 633 RFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEML--QQETNWALL----KLHLTAVNETVLIDNLDIFKKNGFDFIFDEEAPITERVKLISLPTSKNWTFGQQDIEELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNVHEMKKLVTHMGEIEHPWNCPHGRPTMRHI 833
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Xenopus
Match: prph2 (peripherin 2 (retinal degeneration, slow) [Source:Xenbase;Acc:XB-GENE-985594]) HSP 1 Score: 229.565 bits (584), Expect = 1.258e-61 Identity = 125/329 (37.99%), Postives = 197/329 (59.88%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ--VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFN-ISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKR 928 IK I+ ++ +ICS Q V+S+A A+KEL+ENS+DA + I+I+LK +GA+ IEV DNG G+ + F+ T ++ TSKL++F DL ++ETFGFRGEAL+SLC L Q+GTTVSI+ +F+TLPVR K+F NLK+EF K + + +YC+I GV+I+C ++ + K+ V+ S+ + ENI +VFGQ QL +I + ++ + +E+ I + +SG+IS+ S++ +QF ++N+RPC+ KV +++ E Y + N+ P V++I + E VD+N+ PDKR Sbjct: 13 IKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGAESIEVSDNGCGVEENNFEGLTLKHHTSKLQDFSDLISVETFGFRGEALSSLCALSDLSIVTCHKTAKVGTRLVYDHNGKIIQKSPVSRQQGTTVSIQQLFYTLPVRHKEFQRNLKKEFTKMVQVLQAYCIISTGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLIPF-VQLPPSETVCEEYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPAKVSKIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKR 340 HSP 2 Score: 182.57 bits (462), Expect = 2.199e-46 Identity = 83/209 (39.71%), Postives = 137/209 (65.55%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ +N+ AE+EL++ K+ F +E+IGQFN GFII +L+ DLF+IDQHA+DEK FE + + Q L P++L +++ +E ++ +N+D+F K GF F F +EA + R+ + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RH+ Sbjct: 633 RFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEMLQQETVLQGQRLIAPQKLHLTAVNETVLIDNLDIFKKNGFDFIFDEEAPITERVKLISLPTSKNWTFGQQDIEELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNVHEMKKLVTHMGEIEHPWNCPHGRPTMRHI 839
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Mouse
Match: Pms2 (PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]) HSP 1 Score: 251.906 bits (642), Expect = 5.862e-69 Identity = 133/350 (38.00%), Postives = 210/350 (60.00%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ ++ +ICS Q V+S++ A+KELIENS+DA + I++RLK++G D+IEV DNG G+ F+ ++ TSK++ F DL +ETFGFRGEAL+SLC L KGTTVS++++F+TLPVR K+F N+K+E+ K + + +YC+I GV++SC ++ + K Q ++ T G G+ ENI SVFGQ QL +I + + + +E+ +S + + +SG+ISQ T S + +QF ++N+RPC+ KV +L+ E Y + N+ P V+++S+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTRLVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYAKMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFV-QLPPSDAVCEEYGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 363 HSP 2 Score: 175.637 bits (444), Expect = 3.212e-44 Identity = 89/267 (33.33%), Postives = 154/267 (57.68%), Query Frame = 2 Query: 1160 IQTKFPKLQLSDPNQINSCRKMKLPLVVSQNISANFSMKYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 I + P Q + +++ KM +V+ + ++ + + L A+N ++ K++++I N+ AE+EL++ K F ++E++GQFN GFI+ +L +DLF++DQHA+DEK FE + +Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 587 ISQRLPGPQSTSAAEVDVAIKMNKRIVLLEFSLSSLAKRMKQLQHLKAQNKHELSYR-KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWNCPHGRPTMRHV 850
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Mouse
Match: Pms2 (PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]) HSP 1 Score: 181.03 bits (458), Expect = 2.488e-48 Identity = 94/226 (41.59%), Postives = 139/226 (61.50%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMI 625 IK I+ ++ +ICS Q V+S++ A+KELIENS+DA + I++RLK++G D+IEV DNG G+ F+ ++ TSK++ F DL +ETFGFRGEAL+SLC L KGTTVS++++F+TLPVR K+F N+K+E+ K + + +YC+I GV++SC ++ + K Q ++ T G G+ ENI SVFGQ QL +I Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTRLVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYAKMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLI 240 HSP 2 Score: 160.614 bits (405), Expect = 2.567e-41 Identity = 74/189 (39.15%), Postives = 117/189 (61.90%), Query Frame = 2 Query: 1394 IFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +F K F ++E++GQFN GFI+ +L +DLF++DQHA+DEK FE + +Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 266 LFYKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWNCPHGRPTMRHV 452
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Mouse
Match: Pms1 (PMS1 homolog 1, mismatch repair system component [Source:MGI Symbol;Acc:MGI:1202302]) HSP 1 Score: 140.198 bits (352), Expect = 2.157e-33 Identity = 105/359 (29.25%), Postives = 166/359 (46.24%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLC----------------------------------FLGQKGTTVSIRNIFHTLPVRRKQFLGNLKR---EFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKS---SNSSKQFLYVNRRPCELPKVKRLI-----AECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 +K++ T + + SSQ + S+ + +KELIENSLDA + IE++L+N+G D IE+ DNG GI + + TSK+ + +DL NL T+GFRGEAL S+C LGQ GTTV+ +F LPV RKQF K+ E + + SY ++ V+I+ NK VI + + SV G + G +E +H +I LSG+ + S S + F+++N RP + +LI +C + + + P F + I +P VD+N+ PDK +LL N+ V ++ +++C+ Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGIKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFSTQYVLDGSGHILSQKPSHLGQ-GTTVTALKLFKNLPV-RKQFYSTAKKCKDELKNVQDLLISYGVLKPDVRITFV---HNKAVIWQKSRVPDHRMALMSVLG-TAVMGNMESVEQH---------------CEQSQIYLSGFFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLY-PIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCY 337
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Mouse
Match: Pms1 (PMS1 homolog 1, mismatch repair system component [Source:MGI Symbol;Acc:MGI:1202302]) HSP 1 Score: 140.198 bits (352), Expect = 5.320e-33 Identity = 105/358 (29.33%), Postives = 166/358 (46.37%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLC----------------------------------FLGQKGTTVSIRNIFHTLPVRRKQFLGNLKR---EFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKS---SNSSKQFLYVNRRPCELPKVKRLIAECY--RVMNKTHN--PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 +K++ T + + SSQ + S+ + +KELIENSLDA + IE++L+N+G D IE+ DNG GI + + TSK+ + +DL NL T+GFRGEAL S+C LGQ GTTV+ +F LPV RKQF K+ E + + SY ++ V+I+ NK VI + + SV G + G +E +H +I LSG+ + S S + F+++N RP + +LI Y + + ++ P F + I +P VD+N+ PDK +LL N+ V ++ +++C+ Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGIKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFSTQYVLDGSGHILSQKPSHLGQ-GTTVTALKLFKNLPV-RKQFYSTAKKCKDELKNVQDLLISYGVLKPDVRITFV---HNKAVIWQKSRVPDHRMALMSVLG-TAVMGNMESVEQH---------------CEQSQIYLSGFFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCY 337
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Mouse
Match: Mlh1 (mutL homolog 1 [Source:MGI Symbol;Acc:MGI:101938]) HSP 1 Score: 123.635 bits (309), Expect = 5.384e-28 Identity = 99/369 (26.83%), Postives = 168/369 (45.53%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGIS--ENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQ---FLYVNRRPCELPKVKRLIAECYRV-MNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTL 1042 I+R++ RI + + + A AIKE+IEN LDA S I++ +K G +I++ DNGTGI + D R TTSKL+ F+DL ++ T+GFRGEAL S+ + G +GT +++ ++F+ + RRK L N E+ K L + Y + G+ S + K + + R + + +NI+S+FG +IE+ E +++G+IS ++ S K+ L++N R E +++ I Y + K +P +S+ + + VDVN+ P K + ++ + ++ I S L S S+ Y QTL Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKA-LKNPSEEYGKILEVVGRYSIHNSGISFS---VKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTL----------------AFKMNGYISN------ANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMY--FTQTL 348
BLAST of DNA mismatch repair protein PMS2 vs. UniProt/SwissProt
Match: sp|F1NQJ3|PMS2_CHICK (Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3) HSP 1 Score: 253.832 bits (647), Expect = 1.021e-68 Identity = 134/350 (38.29%), Postives = 213/350 (60.86%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ-VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IKRI+ ++ RICS Q V+S+ A+KEL+ENSLDA + I++RLK+ GA++IEV DNG G+ F+ T ++ TSK+++F DL ++ETFGFRGEAL+SLC L Q+GTTVSI+ +FHTLPVR K+F N+K+E+ K + + +YC+I +GV+I+C ++ + K+ ++ST G + ENI +VFG+ QL +I + N+ + +E+ + EK+ ++G+IS+ S + +QF ++N+RPC+ KV +L+ E Y + NK P V++I + E VD+N+ PDKR +LL + + A++K S++ F Sbjct: 14 IKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSAKVGTRLVFDHNGKITQKAPYPRQQGTTVSIQQLFHTLPVRHKEFQRNIKKEYAKMVQILQAYCIISKGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPF-VQLPPNEAVCEEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHLYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMF 362 HSP 2 Score: 183.341 bits (464), Expect = 7.741e-46 Identity = 87/212 (41.04%), Postives = 134/212 (63.21%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCL 1963 +++++IS N+ AE+EL++ K+ F +E+IGQFN GFIIA+LN DLFIIDQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R+ + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RH+ L Sbjct: 654 RFRAKISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMC--RPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPWNCPHGRPTMRHIASL 863
BLAST of DNA mismatch repair protein PMS2 vs. UniProt/SwissProt
Match: sp|P54278|PMS2_HUMAN (Mismatch repair endonuclease PMS2 OS=Homo sapiens OX=9606 GN=PMS2 PE=1 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 3.835e-68 Identity = 135/350 (38.57%), Postives = 209/350 (59.71%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNK-QVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ ++ +ICS Q V+S++ A+KEL+ENSLDA + I+++LK++G D+IEV DNG G+ F+ T ++ TSK++ F DL +ETFGFRGEAL+SLC L +GTTVS++ +F TLPVR K+F N+K+E+ K + + +YC+I G+++SC ++ + K Q ++ T G I ENI SVFGQ QL +I + + + +E+ +S L + +SG+ISQ T S++ +QF ++NRRPC+ KV RL+ E Y + N+ P V++IS+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFV-QLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 363 HSP 2 Score: 176.022 bits (445), Expect = 2.042e-43 Identity = 89/240 (37.08%), Postives = 140/240 (58.33%), Query Frame = 2 Query: 1253 ISANFSM----KYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 + +FSM K I L A+ K++++I N+ AE+EL++ K F ++E+IGQFN GFII +LN+D+FI+DQHA+DEK FE + Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RV+ AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 616 VPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMC--RPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853
BLAST of DNA mismatch repair protein PMS2 vs. UniProt/SwissProt
Match: sp|P54279|PMS2_MOUSE (Mismatch repair endonuclease PMS2 OS=Mus musculus OX=10090 GN=Pms2 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 8.159e-55 Identity = 121/354 (34.18%), Postives = 195/354 (55.08%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ-VILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNIS-----KVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ ++ +ICS Q ++S++ A+KELIENS+DA + I++RLK++G D+IEV DNG G+ F+ ++ TSK++ F DL +ETFGFRGEAL+SLC L KGTTVS++++F+TLPVR K+F N+K+E+ K + + +YC+I GV++SC ++ + K+ ++ T G G+ ENI SVFGQ QL +I + + + +E+ +S K + + + P V ++ + S R P + L Y + N+ P V+++S+ E VD+N+ PDKR +LL + + AV+K S++ F Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTRLVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYSKMVQVLQAYCIISAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPF-VQLPPSDAVCEEYGLSTSGRHKTFSTFRASFHSARTAPGGVQQTGSFSSSI----RGPVTQQRSLSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 363 HSP 2 Score: 175.637 bits (444), Expect = 2.169e-43 Identity = 89/267 (33.33%), Postives = 154/267 (57.68%), Query Frame = 2 Query: 1160 IQTKFPKLQLSDPNQINSCRKMKLPLVVSQNISANFSMKYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 I + P Q + +++ KM +V+ + ++ + + L A+N ++ K++++I N+ AE+EL++ K F ++E++GQFN GFI+ +L +DLF++DQHA+DEK FE + +Q L P+ L +++ +E ++ EN+++F K GF F E A + R + ++P N G +D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M + PW C HGRPT+RH+ Sbjct: 587 ISQRLPGPQSTSAAEVDVAIKMNKRIVLLEFSLSSLAKRMKQLQHLKAQNKHELSYR-KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWNCPHGRPTMRHV 850
BLAST of DNA mismatch repair protein PMS2 vs. UniProt/SwissProt
Match: sp|Q941I6|PMS1_ARATH (DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 2.653e-54 Identity = 114/345 (33.04%), Postives = 187/345 (54.20%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKN-KQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASI 982 I+ IN RICS Q ++ +++A+KEL+ENSLDA + IEI L+++G D +V+DNG GISP F ++ TSKLE+F DL NL T+GFRGEAL+SLC LG Q GTTV++R +F LPVR K+F N+++E+ K ++ + +Y LI +GV+ C KN K V+L+T+G G + +NI +VFG + + ++ + E + G++S+P + + + +Q+ ++N RP ++PKV +L+ E Y+ + P ++ +P D+N+ PDKR + +++ V ++ + Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVS-----------------ICVSEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGL 344 HSP 2 Score: 166.392 bits (420), Expect = 2.716e-40 Identity = 82/207 (39.61%), Postives = 123/207 (59.42%), Query Frame = 2 Query: 1373 AEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIF-MTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVM------------PIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 A EL+R+FRK+ F ++V+GQFN GFIIA+L +DLFI+DQHA+DEK FE ++ QPL P L++S +E + ++D+ + GF + + + F + A+P N+ G EDL +++ + D C V P RVR+ +AS ACRS++MIG L +M KI++ ++ L+ PW C HGRPT+RHL Sbjct: 689 ATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGECSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNCPHGRPTMRHL 895
BLAST of DNA mismatch repair protein PMS2 vs. UniProt/SwissProt
Match: sp|Q0STR3|MUTL_CLOPS (DNA mismatch repair protein MutL OS=Clostridium perfringens (strain SM101 / Type A) OX=289380 GN=mutL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 2.253e-53 Identity = 184/692 (26.59%), Postives = 330/692 (47.69%), Query Frame = 2 Query: 38 INLMNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ--------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHN-PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSC---FLKSGYS------QEYRSI-NQTLSESVNSKFNNNYTL--NLSVNVDNSLRSPHVRKHNLRSPD---KIQTKFPKLQLSDPNQINSCR-KMKLPLVVSQNISANFSMKYISLLDTNAENDIT--NAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKF---LNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRF-QFKEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVR-SAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTI 1945 +N +NI +N T+ +I + + V ++ +KEL+ENSLDA + I I ++N G +I+++D+G+G+ P + +K + + TSK+++ D+ ++ T GFRGEAL S+ + + +GT + +RN+F +P R+K FL RE + + L V K+ N + IL+T G G + + I++++G++ +I EH + + G+I T S N+ Q L+VN+R + + + +R N T P FV+ I E +DVNI P K + ++ +F ++ ++ S ++K ++ +++ ++ + + ES++ + + L N++ V + R + +N S D K + P LS NQ S + L + +SA + Y +L N D N ++ S+ N N +RI+R+ F L+VIGQFNK +I+A + L++IDQHA+ EK FEK+ + + ++ QPL P + + + D EN ++F K GF+ F + I + VP + + TE + M+ +K G+ V V+ + IAS +CR+A+ LS ++M+ +++ + + DP+ C HGRPTI Sbjct: 1 MNRINI--LNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSGVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGKELIISGGEKESLTDCSMNRGTQIEVRNLFFNVPARKK-FLKTTARESALINDLVNRISLANPDVSF---KLFNNNKKILNTYGNGKLIDVIRTIYGKSTAENLIYFE-EHK-----------------DTASVYGFIGNDTLARASRNN--QSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKLVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSDDKRKEEIYSYN-PSKDYEAKTEVNIPVDFLSKENQEESSKFNNSLENNDFKEVSAKREISYDPILIKNELKDKVSENTYDSLESSDYKCNKNEYGNSLEERIYREAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISDFGDN----SIRIEEVPYFLDKLNPTELIISMINNLKKMGTGETV---EVKYNKIASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658
BLAST of DNA mismatch repair protein PMS2 vs. TrEMBL
Match: A0A4S2LJX3 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_006689 PE=4 SV=1) HSP 1 Score: 437.187 bits (1123), Expect = 1.146e-131 Identity = 264/747 (35.34%), Postives = 394/747 (52.74%), Query Frame = 2 Query: 80 QRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFL--GNLKREFDKALNYITSYCLICEGVQISCCKIDKN--KQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKS------------------SNSSKQFLYVNRRPCELPKVKRLIAECYRVMNK------------------THNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLK------SGYSQEYRSINQTLSESVNSKFNNNYTL-NLSVNVDNSLRSPHV--------RKHNLRSPDKIQTKFPKLQLSDPNQINSCRKMK--------LPLVVS---QNISANFSMKYI----SLLDTNAENDITNAF------------NGKYK-SEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGS-TCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 RICS Q VV++A+A+KEL+ENS+DA + KI++RLK FG++ IEV+DNGTGI +F+ T +++TSKL FDDL +++TFGFRGEAL+SLC L + +GTTV + +FH LPVRR+ L +EF + +N +T+YCLI GVQISC +I KN K ++S + +NI V+GQ+Q + ++EL +I DILDEFN++ I +SG+I++P+ + + S S +QF+YVN RPCELP+V RL+ + +R +K T P FV+ + +P TVD+N+ PDKR LLL ++ V A+ KA ++ + Q +++Q++ + TL + +++V + R+P V R + D+ T + P N + LP + Q S +FSM + S +D N IT NG++ S + TAE EL F K FN+L+++GQFN GFI+AR QDLFIIDQHASDEK +FE+ + QPL P+ L++S E+++ N+D+F K GF F+ E A ++ + A P + G D+ EML ++ + S C P R+R+ +AS ACRSA+MIGT+L + +M +I++ M ++ PW C HGRPT+RHL L Sbjct: 19 HRICSGQVVVTLASAVKELVENSIDAGATKIDVRLKEFGSESIEVIDNGTGIIERDFEAITGKHSTSKLREFDDLQSVQTFGFRGEALSSLCQLAKVVVHTCSSGAPVGTRMEFDTNGDILARRPLARSRGTTVIVNQLFHNLPVRRRHLTDPAQLAKEFARTVNLLTAYCLISVGVQISCVRISKNGEKIPVVSNGSASSLKDNIFGVYGQSQASSLLELAPISSIPSDILDEFNVNDALEFGSISISGFITKPSTLQSADASSPSGSSKGRAASGARSTSDRQFVYVNGRPCELPRVARLVTDVWRRCSKEALAVSNDGLQMPASNASTSFPFFVLMLRMPTGTVDINLTPDKRTLLLHHERYVLALTKAILVQTLFRNSNVHLPSVQQSCSTLDQSIIVIPADCPPEHCTLSSPNLSVISRKRTPFVDDSNRWGKRAATIDFTDQRSTPLCASHKTPPKSANGVAGLGESFEIVDLLPTTETLSRQQASVHFSMSDLRAAWSTMDENRTTPITQVASQHPLDDVDLVSNGEFSLGSFRSTESDTAESELSTYFDKATFNELQIVGQFNLGFIVARHAQDLFIIDQHASDEKYRFEQLFENYRFTCQPLVAPQALELSVAQEQLLLNNLDVFAKNGFAFRVDENAPCGRQVQLVATPMLEGHIFGRSDIEEMLFVLSESCSRRC--RPSRLRTILASRACRSAVMIGTALDHAKMQRIVRNMGTMVHPWNCPHGRPTMRHLFHLG 763
BLAST of DNA mismatch repair protein PMS2 vs. TrEMBL
Match: G7Y8X1 (DNA mismatch repair protein PMS2 OS=Clonorchis sinensis OX=79923 GN=CLF_103022 PE=4 SV=1) HSP 1 Score: 427.557 bits (1098), Expect = 4.952e-128 Identity = 262/758 (34.56%), Postives = 395/758 (52.11%), Query Frame = 2 Query: 86 ICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFT-------------SRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFL--GNLKREFDKALNYITSYCLICEGVQISCCKIDKN--KQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEV------------------FKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNK------------------THNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKS------GYSQEYRSINQTLSESVNSKFNNNYTLN-LSVNVDNSLRSPHV--------RKHNLRSPDKIQTKFPKLQLSDPNQINSCRKMK--------LPLVVS---QNISANFSMKYI----SLLDTNAENDITNAF------------NGKYK-SEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGS-TCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 ICS Q VV++A+A+KEL+ENS+DA + KI++RLK FG++ IEV+DNGTGI +F+ + +++TSKL FDDL +++TFGFRGEAL+SLC L + +GTTV + +FH LPVRR+ L +EF + +N +T+YCL+ GVQISC +I KN K ++S + +NI V+GQ+Q + ++ELT +I DILDEFN++ I +SG+I++P+ + S S +QF+YVN RPCELP+V RL+ + +R +K T P FV+ + +P TVD+N+ PDKR LLL ++ V A+ KA ++ ++ Q +++Q++ + + TL+ +++V + R+P V R + D+ T + P N + LP + Q S +FSM + S L+ N +T NG++ S N TAE EL F K FN+L+++GQFN GFI+AR QDLFIIDQHASDEK +FE+ + QPL P+ L++S E+++ N+D+F K GF F+ E + ++ + A P + G D+ EML ++ + S C P R+R+ +AS ACRSAIMIGT+L + +M +I++ M ++ PW C HGRPT+RHL L Sbjct: 21 ICSGQVVVTLASAVKELVENSIDAGATKIDVRLKEFGSESIEVIDNGTGIIERDFEAISVLVLGPTYAFVLAGKHSTSKLREFDDLQSVQTFGFRGEALSSLCQLAKVVVHTCASDAPVGTRMEFDANGDILARRPLARSRGTTVIVNQLFHNLPVRRRHLTDPAQLAKEFARTVNLLTAYCLVSVGVQISCVRISKNGEKIPVVSNGSASSLKDNIFGVYGQSQASTLLELTPTSSIPSDILDEFNVNDAVEFGSISISGFITKPSTLQSADASSPSASSKGRAASGARSTSDRQFIYVNGRPCELPRVARLVTDVWRRCSKEALAVSNDGLQMPASNASTAFPFFVLMLQMPTGTVDINLTPDKRTLLLHHERYVLALTKAILVQTLFRNPNVHLPSVQQSCSTLDQSVIGIPADCPSEHCTLSSPTLSVSSRKRTPFVDDSDRWGKRAATIDLTDQRSTPLRASHKTPPKSTNGVAGLGESFEIVDLLPTTETLSRQQASVHFSMSDLRAAWSTLEDNRTTPVTEVASQHPFDDIDLVSNGEFSLGSFRSTENDTAESELSTYFDKATFNELQIVGQFNLGFIVARHAQDLFIIDQHASDEKYRFEQLFENYRFTCQPLVVPQALELSVAQEQLLLNNLDVFAKNGFAFRVDENSPCGRQVQLVATPMLEGHIFGRSDIEEMLFVLSESCSRRC--RPSRLRTILASRACRSAIMIGTALDHAKMQRIVRNMGTMVHPWNCPHGRPTMRHLFHLG 776
BLAST of DNA mismatch repair protein PMS2 vs. TrEMBL
Match: A0A504Z4G0 (Mismatch repair endonuclease PMS2 OS=Fasciola gigantica OX=46835 GN=FGIG_09358 PE=4 SV=1) HSP 1 Score: 415.231 bits (1066), Expect = 1.013e-123 Identity = 261/762 (34.25%), Postives = 392/762 (51.44%), Query Frame = 2 Query: 50 NIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQF--LGNLKREFDKALNYITSYCLICEGVQISCCKIDKN--KQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEV---------------------FKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNK------------------THNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLNLSVNVDNSLRSPHVRKH-------NLRSPDKIQTKFPKLQLSDPNQINSCRKMKLPLVVSQNISANFSMKYISLLDTNAENDITNAFNG--------------KYKSEISS------------------------NNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGS-TCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 +I ++ +IC+ Q VV++A+AIKEL+ENS+DA++ KI+IRLK++G + IEV+DNG GI +F++ T ++ TSKL +F+DL ++ TFGFRGEAL SLC L + +GTTV + +FH LPVRRK + +EF KA+N +T+YCL+ QI+C ++ K+ K +++S + +NI +VFGQ+QLN +I L + D+L EF I E I+L G+IS+P V S++ +QF++VN RPC++PK+ R++ + +R ++ + P FV+ +P + VDVN+ PDKR LLL NQ++V A+ KA +L +RS L N F + + VN+ L SP V K ++++ K+ T+ LQ + I S + +L + S + + I D + + +A N K K +SS ++ AE EL F K F++LEV+GQFN GFII NQDLFIIDQHASDEK +FE+ QPL P+ L +S G E+++ N+D+F K GF F E A ++ +TA P N V G D+ EML ++ + S C P R+R +AS ACRSA+MIGT+L + +M +I+++M +++ PW C HGRPT+RHL L Sbjct: 5 SISHLDKAIVNKICAGQVVVTLASAIKELLENSIDAEATKIDIRLKDYGCESIEVVDNGLGIEEAQFERITKKHCTSKLRSFEDLASVTTFGFRGEALFSLCQLAELIIHTCSADATYGTRLQFDANGCIAAKRPLARSRGTTVIVNRLFHNLPVRRKNLSEPAQMIKEFSKAVNVLTAYCLVAVNKQITCTRVGKSGEKVLVVSNGASTSLQDNIAAVFGQSQLNCLIPLLQVTTVQSDVLAEFGIKDPILDENIKLHGYISKPPGVEANVSIRPPGSRVSPKTDNAGHGRSSADRQFVFVNGRPCDMPKINRMVTDLWRRCSRETISLSSSGLRMPVQSTSSRYPVFVLCFQVPTDIVDVNLTPDKRTLLLQNQNQVLALTKAVLLQTL--------FRSNGVDLLSLTNKSFETDVSAIEIVNLPIDLLSPEVPKKRPFVFEPSVQASKKVPTENCLLQNNYSLVIPSTEEPRLVPIPSLAFEKSGYAENIDKFDYRDADGVGSAENPLELRPSVPLEFSFTKLKQSLSSVSIDLSTVCSTSSTSAFSLGNFRAEDSNAAEGELTTYFSKSSFHELEVVGQFNLGFIIGLHNQDLFIIDQHASDEKYRFEQLCADHRFVCQPLVVPRALDLSVGQEQLLLSNLDVFAKSGFAFHVDESAPCGRQVQLTATPMVGNKVFGRADVEEMLFVLAESCSRNC--RPTRLRDILASRACRSAVMIGTALDHGKMRRIIRKMGTMEHPWNCPHGRPTMRHLFHLG 756
BLAST of DNA mismatch repair protein PMS2 vs. TrEMBL
Match: W6USS9 (Mismatch repair endonuclease PMS2 OS=Echinococcus granulosus OX=6210 GN=EGR_00630 PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 1.834e-122 Identity = 243/723 (33.61%), Postives = 394/723 (54.50%), Query Frame = 2 Query: 44 LMNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGN--LKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGG--ISENIKSVFGQNQ---LNGMIELTTEHNINQDILDEFNISKVAN-LEKIELSGWISQP----TEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYR------VMNKTHN------------PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLNLSVNVDNSLRSPHVRKHNLRSPDKIQTKFPKLQLSDPNQI-----------NSCRK---MKLPLVVSQNISANFSM-KYISLLDTNAENDI--TNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGS-TCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 + +++ ++ Q+ ++CSSQ VV++ AIKELIENS+DA++ KIEIRLKN+G+D IEV+D+G GI +F+ ++TSK+++F+D++ +FGFRGEA+ SLC + +GTTV + +FHTLPVRR+ L +EF +A+ I+SYCL+ GVQ+ C +ID+ L + G +S NI +V+GQ Q L ++E+T + + ++ +E+ + A L++I + G+IS P T V S++ +QF+ +N RPC+ P+ RL + +R + +K+ + P V+ I+LP+ VDVN+ PDKR LLL + V +KA++ + ++ Q ++ + S + + + L+ + P + H P+ K +LS P+ +S R+ LPL+ +++ FS+ + + +D+ G++ + ++ + A+ EL IFRK++F D+ VIGQFNKGFI+ + +DLFI+DQHASDEK +FE + +SQPL P+RL +++ E ++ EN+D+F++ GF F E A L R + + P V G D+ EML ++ + S C P R+R +AS ACRSA+MIGT L + QM +I+ MS+++ PW C HGRPT+RHL L Sbjct: 1 MSSVRTLDAQSVHKLCSSQVVVTLGIAIKELIENSIDAEATKIEIRLKNYGSDSIEVVDDGLGIDEADFETLGKSHSTSKIQDFNDISKTSSFGFRGEAIFSLCQVADVTIHTRTERAKVGTRLEFTNSGGLKSRRPLARSRGTTVCVERLFHTLPVRRRYLTDRTRLSKEFSQAIALISSYCLMVTGVQLVCYRIDRKGTKTLVVSNMEGELVSSNIAAVYGQAQRFQLESLVEITNDFVVTDELKEEYKVKLSAEELDEIRIFGFISMPPMGSTNVVGRSSADRQFVSINGRPCDFPQFTRLATDVWRRCCRESLFSKSQSLGMPSRSTTSAFPVLVLLINLPRAKVDVNLSPDKRQLLLHWERAVVMKLKAALTATLVRVDGEQSIANLPVSSSTAAAVATASEAAVGLT-------QQPPISAHLPPQPESSSQNGKKPRLSTPSSSPIASQKPVFSSDSARRNYNRHLPLLNRESVRVEFSVGRLLKYWAARGSSDVLVETPSTGEFHANLTES---AAQSELTSIFRKEWFRDMRVIGQFNKGFIVCQHEEDLFIVDQHASDEKHRFENLCANHQFTSQPLVVPQRLVLNAVQEHLLEENMDVFSESGFIFSTDENAPLGQRFHLISAPMSEGKVFGLADIEEMLFVLSESLSRNC--RPSRLRDMLASRACRSAVMIGTVLDHKQMARIVSNMSTMEHPWNCPHGRPTMRHLFHLG 711
BLAST of DNA mismatch repair protein PMS2 vs. TrEMBL
Match: A0A4S2LJN2 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_006689 PE=4 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 8.700e-119 Identity = 251/721 (34.81%), Postives = 376/721 (52.15%), Query Frame = 2 Query: 80 QRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFL--GNLKREFDKALNYITSYCLICEGVQISCCKIDKN--KQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKS------------------SNSSKQFLYVNRRPCELPKVKRLIAECYRVMNK------------------THNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLK------SGYSQEYRSINQTLSESVNSKFNNNYTL-NLSVNVDNSLRSPHV--------RKHNLRSPDKIQTKFPKLQLSDPNQINSCRKMK--------LPLVVS---QNISANFSMKYI----SLLDTNAENDITNAF------------NGKYK-SEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGS-TCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKIL 1888 RICS Q VV++A+A+KEL+ENS+DA + KI++RLK FG++ IEV+DNGTGI +F+ T +++TSKL FDDL +++TFGFRGEAL+SLC L + +GTTV + +FH LPVRR+ L +EF + +N +T+YCLI GVQISC +I KN K ++S + +NI V+GQ+Q + ++EL +I DILDEFN++ I +SG+I++P+ + + S S +QF+YVN RPCELP+V RL+ + +R +K T P FV+ + +P TVD+N+ PDKR LLL ++ V A+ KA ++ + Q +++Q++ + TL + +++V + R+P V R + D+ T + P N + LP + Q S +FSM + S +D N IT NG++ S + TAE EL F K FN+L+++GQFN GFI+AR QDLFIIDQHASDEK +FE+ + QPL P+ L++S E+++ N+D+F K GF F+ E A ++ + A P + G D+ EML ++ + S C P R+R+ +AS ACRSA+MIGT+L + +M + L Sbjct: 19 HRICSGQVVVTLASAVKELVENSIDAGATKIDVRLKEFGSESIEVIDNGTGIIERDFEAITGKHSTSKLREFDDLQSVQTFGFRGEALSSLCQLAKVVVHTCSSGAPVGTRMEFDTNGDILARRPLARSRGTTVIVNQLFHNLPVRRRHLTDPAQLAKEFARTVNLLTAYCLISVGVQISCVRISKNGEKIPVVSNGSASSLKDNIFGVYGQSQASSLLELAPISSIPSDILDEFNVNDALEFGSISISGFITKPSTLQSADASSPSGSSKGRAASGARSTSDRQFVYVNGRPCELPRVARLVTDVWRRCSKEALAVSNDGLQMPASNASTSFPFFVLMLRMPTGTVDINLTPDKRTLLLHHERYVLALTKAILVQTLFRNSNVHLPSVQQSCSTLDQSIIVIPADCPPEHCTLSSPNLSVISRKRTPFVDDSNRWGKRAATIDFTDQRSTPLCASHKTPPKSANGVAGLGESFEIVDLLPTTETLSRQQASVHFSMSDLRAAWSTMDENRTTPITQVASQHPLDDVDLVSNGEFSLGSFRSTESDTAESELSTYFDKATFNELQIVGQFNLGFIVARHAQDLFIIDQHASDEKYRFEQLFENYRFTCQPLVAPQALELSVAQEQLLLNNLDVFAKNGFAFRVDENAPCGRQVQLVATPMLEGHIFGRSDIEEMLFVLSESCSRRC--RPSRLRTILASRACRSAVMIGTALDHAKMQRTL 737
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Cavefish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 242.276 bits (617), Expect = 4.166e-67 Identity = 129/353 (36.54%), Postives = 209/353 (59.21%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQ-VILSTRGIGGISENIKSVFGQNQLNGMI---ELTTEHNINQDI-LDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ + +ICS Q V+S+A A+KEL+ENS+DA + ++IRLK+ G +++EV DNG G+ F+ T ++ TSKL F DL ++ETFGFRGEAL+SLC L Q+GTTVS++ +F TLPVR K+F N+K+E+ K ++ + SYC+I GV+I+C +I + K+ +L T G + +NI ++FG QL +I +++ NI +D L+ ++ K + +SG++SQ S + +QF ++N+RPC+ KV +L+ E Y + N+ P ++I++ E VDVN+ PDKR + L + + A++K+S++S + Sbjct: 10 IKAIDRHSVHQICSGQVVLSLATAVKELVENSVDAGATNVDIRLKDHGTELVEVTDNGKGVEEENFEGLTLKHHTSKLREFSDLIHVETFGFRGEALSSLCALSDLSVVTCHDSTSVGTRLVYDHDGRLVQRAPQPRQQGTTVSLQQLFSTLPVRHKEFQRNIKKEYSKMIHVLQSYCIISTGVRITCTNQIGQGKRNTVLCTSGSQSMRDNIGALFGPKQLQSLIPFQQISPTDNIKEDYGLNGADLPK----DLFTISGYVSQADHGVGRSATDRQFFFINKRPCDPSKVSKLVNEVYHMFNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKFLLAILKSSLISMY 358
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Cavefish
Match: ENSAMXT00000030240.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000042.1:581942:583570:-1 gene:ENSAMXG00000041557.1 transcript:ENSAMXT00000030240.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 155.221 bits (391), Expect = 1.345e-42 Identity = 75/183 (40.98%), Postives = 111/183 (60.66%), Query Frame = 2 Query: 1412 FNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 F ++++IGQFN GFII +L DLF++DQHA+DEK FE + Q L P+ L + + E I+ EN+++F K GF F E A + R+ + ++P N G D+ E++ ++ D G C P RVR AS ACR ++MIGT+L+ +M K++ M ++ PW C HGRPT+RHL Sbjct: 2 FKEMQIIGQFNLGFIITKLRSDLFMVDQHATDEKYNFEMLQQHTVLKGQRLIAPQNLHLPAVSETILIENLEIFKKNGFDFLIDEDAPVMERVKLVSLPTSKNWTFGPSDIEELIFMLSDCPGVMC--RPSRVRQMFASRACRKSVMIGTALNTGEMKKLVVHMGEIEQPWNCPHGRPTMRHL 182
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Cavefish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 135.576 bits (340), Expect = 9.022e-32 Identity = 109/406 (26.85%), Postives = 184/406 (45.32%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLC----------------------------------FLGQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKAL--NYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSS---KQFLYVNRRPCELPKVKRLIAECYRVMNKTHN---------PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLNLSVNVDNSLRSPH 1126 +K ++ +T + + SSQ + S+ +KELIENSLDA S +E++L+N+G D IEV DNG GI + ++ TSK+ +DL +LET+GFRGEAL S+C LGQ GTTV +F LPVRR+ + + K + + + + +Y +I ++I NK + + + +V G + L +H Q +I + G+ +P S++S+ K F++VN RP + +L+ + Y N H+ P +++I +P VDVN+ PDK ++L N+ V +++ ++S + + +I S S+ + TLN + S++ PH Sbjct: 1 MKALSAETVRLLSSSQVITSVLNVVKELIENSLDAGSTSLEVKLENYGLDRIEVRDNGCGIKSADASVMAVKHYTSKISCHEDLEHLETYGFRGEALASICAISEVVVTTKTADDDVSTQYTLDLSGRVISQKPSHLGQ-GTTVCALKLFKNLPVRRQYYSNSKKCKEEVKKVQDLLMAYAVIKPELRIV---FTHNKATVWQKARVSDHRAALMAVLGAASAANL--LPVQHRQEQ--------------PEIAIEGYFPKPNSDLNSTSSNTSDKTFVFVNSRPVHHKDILKLVKQYY--ANAAHSSNESASRRFPVLMMNIIVPASNVDVNLTPDKTQVMLQNKDAVLLAVESVLISLYGSFSVGNDNHTIGDGQSSSMVGQ-----TLN---QISESIKEPH 376
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Cavefish
Match: mlh1 (mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]) HSP 1 Score: 123.635 bits (309), Expect = 3.435e-28 Identity = 100/369 (27.10%), Postives = 170/369 (46.07%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGI--GGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQ---FLYVNRRPCELPKVKRLIAECYRV-MNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTL 1042 I+R++ RI + + + A AIKE+IEN LDA S I++ +K G +I++ DNGTGI + + R TTSKL+ F+DL ++ T+GFRGEAL S+ + G +GT +S+ ++F+ +P RRK L + E+ + + ++ Y + G + + K +++ + + + +NI+ VFG MIE+ E K+A +L G+IS ++ S K+ L++N R E +K+ I Y + K +P +S+ + +DVN+ P K + ++ + I+ I S L S S+ Y QTL Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVTVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQTFEDLTSISTYGFRGEALASISHVAHVTITTKTADGKCAYRGNYCDGKLKAPPKPCAGNQGTLISVEDLFYNVPTRRKA-LKSPSEEYSRIVEVMSRYAIHNSGKSFT---VKKQGEMVADVKTLPNASVLDNIRVVFGVAVSREMIEVGCEDQ------------KLA----FKLKGYISN------ANYSVKKCIFILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPHNIDVNVHPTKHEVHFLHEDCIIESIQKHIESKLLGSNSSRTY--FTQTL 345
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Cavefish
Match: mlh3 (mutL homolog 3 [Source:NCBI gene;Acc:103038515]) HSP 1 Score: 77.411 bits (189), Expect = 1.004e-13 Identity = 48/162 (29.63%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG------------------------------------QKGTTVSIRNIFHTLPVRRKQF 430 I+ ++ + ++ S AV S+ ++EL+ NS+DA + I +++ + A ++V+DNG+G+S + +K +R TSK + +DL++L +GFRGEA+ S+ L GTTV I N FH +PVRRK+ Sbjct: 2 IRTLSKEVQAKLRSGVAVFSLQQCVEELVLNSIDAGATCIAVKI-DIEACKVQVIDNGSGMSREDMEKVGTRYCTSKCSSLEDLDDLRFYGFRGEAIASIASLSTLVEISSQTKASVKTFVKTFNEGRGSGVCEVQDTRPSPGTTVLICNFFHNMPVRRKRM 162 HSP 2 Score: 58.9214 bits (141), Expect = 4.913e-8 Identity = 56/225 (24.89%), Postives = 94/225 (41.78%), Query Frame = 2 Query: 1397 FRKQYFNDLEVIGQFNKGFIIARLNQD------------LFIIDQHASDEKKQFEKFLNQC-----------EMSSQPLACPKRLQISSGDEEIISENIDLFNK----LGFRFQFKEAELNFRIFMTAVP-----------RRNNLV----LGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTI 1945 F K + ++VI Q +K F+ +N L ++DQHA+ E+ + E L + + S + P L+IS +EEI + L+ L F A+ + + + +P RR L E L E ++ ++ G +P+ V + +AS AC AI LS + ++ +SS + P+ CAHGRP+I Sbjct: 915 FTKNMIHSMKVIHQVDKKFLACLINTTDQESTETSQGNLLVLLDQHAAHERVRLEGLLTESYEDDPDTPGKNRLCSSGVIPP--LEISVSEEEI--RLLRLYQSSLRDLALEMSFPPADPS-HVLLERLPTCFIEKENTEQRRGRRTVIKSLSEEYLREHIEFLQSAGRVRSSVPLTVHNVLASQACHGAIKFNDVLSKEECCSLVGSLSSCQLPFQCAHGRPSI 1134
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008212.1 (pep scaffold:Pmarinus_7.0:GL489991:222:4660:1 gene:ENSPMAG00000007425.1 transcript:ENSPMAT00000008212.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 183.726 bits (465), Expect = 4.692e-49 Identity = 87/210 (41.43%), Postives = 135/210 (64.29%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKF-LNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++IS ++NR AEEEL++ F K F +EV+GQFN GF++ARL DLFI+DQHASDEK +E + + Q L P +L +++ E ++ EN+D+F K GF F E A R+ +T +P + + G D+ E++ ++ D G C P RV+ +AS ACR ++MIGT+L+ +M ++L M ++ PW+C HGRPT+RHL Sbjct: 357 RFRAKISPSDNRAAEEELQKKFHKHMFAHMEVVGQFNLGFVVARLGPDLFIVDQHASDEKYNYETLRRDSATLHGQRLIAPLKLPLTAVGELVLMENLDIFRKNGFDFIIDEQAPATQRVRLTTLPVQRGWMFGVSDVEELVFLLSDRPGVMC--RPSRVQQMLASKACRKSVMIGTALNATEMRRLLLHMGEMEQPWSCPHGRPTMRHL 564 HSP 2 Score: 80.1073 bits (196), Expect = 2.142e-15 Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 710 LSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 LSG++S+ S++ +QFL+VN RPC+L KV +L+ E Y N+ P V++I + VDVN+ PDKR++LL + + AV+KA++ S + Sbjct: 1 LSGFVSRCDHGAGRSSADRQFLFVNGRPCDLAKVSKLVNEVYHSYNRHQYPFLVLNIVSSTDLVDVNVTPDKRLVLLQEERLLLAVVKATLTSIY 95
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Sea Lamprey
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 152.14 bits (383), Expect = 1.926e-37 Identity = 99/358 (27.65%), Postives = 170/358 (47.49%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKR---EFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTE---VFKSSNSSKQFLYVNRRPCELPKVKRLIAECYR-----VMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 +K+++ +T + + S+Q S+ + +KEL+ENSLDA + +EI+L+N+G D IEV DNG G+ + R+ TSK+ + +DL ++ T+GFRGE L S+C + + KGTTV I +F LPV RKQF K+ E K + + +Y +I ++ S + NK V+ + + G + MI + A+ ++ +SG++ +P + S++S + L +N RP + +L+ + YR TH P F +S+S+P T+DVN+ PDK ++L N+ + A + +L + Sbjct: 1 MKQLSAETVRLLSSAQVASSVWSVVKELLENSLDAHATSVEIKLENYGFDKIEVRDNGDGVRSEDTQFMAVRHYTSKISSHEDLEDIATYGFRGEGLGSICAVAEVSITTCTAEDEVSMIYSLDSQGHVTSRKPSHLGKGTTVCITKLFKNLPV-RKQFYSTAKKCKEELKKIEDLLVAYGVIHPDIRFS---LAHNKAVVWQKPRVADQRTALLRCLGTTVMGSMIP----------------VQHQASTMQLSISGFVPKPGADPGITSSTSSDRCLLAINGRPVHYKDLLKLVRQYYRNTSPSSSTHTHYPVFFLSLSIPANTIDVNLTPDKMQVMLHNKEAILAELDEMLLQVY 338
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Sea Lamprey
Match: mlh1 (mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]) HSP 1 Score: 123.25 bits (308), Expect = 1.237e-28 Identity = 95/361 (26.32%), Postives = 168/361 (46.54%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEAL----------------NSLCFL-----------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGIS--ENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRV-MNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRS 1027 I+R++ RI + + + A AIKE++EN LDA + I++ +KN G +I++ DNGTGI + + R TTSKLE F+DL+++ TFGFRGEAL +S+C G +GT ++ ++F+ + RRK L + E K ++ Y + GV + + K + R + G + +NI++V+G + +IE+ E ++ ++ +++ G+IS K L++N R + +++ I Y + K +P IS+ L + VDVN+ P K + ++ + ++ + S L S S+ Y S Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMMENCLDAKATSIQVTVKNGGLKLIQIQDNGTGIRKEDMEIVCERFTTSKLEKFEDLSSIATFGFRGEALASISHVAHVTITTKTADSMCAYRAMYCDGKLKAPPKPCAGNQGTQITAEDLFYNVATRRKA-LKSASEEHGKITEVVSRYSIHYSGVSFT---LKKQGESTADVRTLPGATTVDNIRAVYGASVARELIEVNYE---DKKLV-------------LKMRGYISNANYSMKKCVF---LLFINHRLVDSTALRKAIEMVYAAYLPKNSHPFLYISLELAPQNVDVNVHPTKHEVHFLHEDSITEAVQQHVESKLLGSNSSRTYFS 345
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Sea Lamprey
Match: mlh3 (mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]) HSP 1 Score: 77.0258 bits (188), Expect = 2.909e-14 Identity = 81/366 (22.13%), Postives = 150/366 (40.98%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG------------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRR---PCELPKVKRLIAECYRVMNK---THNPT--------------FVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASI 982 ++ + + R+ S A+ + + ++EL+ NSLDA + + RL + +V+DNG GI+ ++ +R TSK DL NL +G+RGEAL S+ + GTTV++ N F+ LPVRRK L E++K I + L+ V + K + V + + + +FG+ + + E+ + EK +++G+I + N + QF+YVN R +L K+ ++ + ++ K NP+ FV++I+ P D+ ++P K ++ + V ++ S+ Sbjct: 2 LQELPPEVQARLRSGVALSTASQCVEELLLNSLDAGASCVAARL-HMDDFRFQVVDNGNGITSNDLQVLGNRYFTSKCHKIKDLENLRYYGYRGEALASIASVSSVVEITSRATSSSRTYTKVIQDMQSVIVHEAEKIRPSHGTTVTVHNFFYNLPVRRKCIPPIL--EYEKIRQKIEAIALVHHQVSFT-LKNEYTGTVSVQCQRTNSMLSRFGQIFGETKAQRLSEINYQS------------------EKFQIAGYIGREGH----HNKNLQFIYVNGRLVLKTKLHKLVNILLKKLSIICKQKICQNPSKKEGSLRNSELHGIFVLNITCPLSDYDICLDPMKTLIEFQDWENVLGCVEMSV 341
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Sea Lamprey
Match: mlh3 (mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]) HSP 1 Score: 76.2554 bits (186), Expect = 4.719e-14 Identity = 81/366 (22.13%), Postives = 150/366 (40.98%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG------------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRR---PCELPKVKRLIAECYRVMNK---THNPT--------------FVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASI 982 ++ + + R+ S A+ + + ++EL+ NSLDA + + RL + +V+DNG GI+ ++ +R TSK DL NL +G+RGEAL S+ + GTTV++ N F+ LPVRRK L E++K I + L+ V + K + V + + + +FG+ + + E+ + EK +++G+I + N + QF+YVN R +L K+ ++ + ++ K NP+ FV++I+ P D+ ++P K ++ + V ++ S+ Sbjct: 2 LQELPPEVQARLRSGVALSTASQCVEELLLNSLDAGASCVAARL-HMDDFRFQVVDNGNGITSNDLQVLGNRYFTSKCHKIKDLENLRYYGYRGEALASIASVSSVVEITSRATSSSRTYTKVIQDMQSVIVHEAEKIRPSHGTTVTVHNFFYNLPVRRKCIPPIL--EYEKIRQKIEAIALVHHQVSFT-LKNEYTGTVSVQCQRTNSMLSRFGQIFGETKAQRLSEINYQS------------------EKFQIAGYIGREGH----HNKNLQFIYVNGRLVLKTKLHKLVNILLKKLSIICKQKICQNPSKKEGSLRNSELHGIFVLNITCPLSDYDICLDPMKTLIEFQDWENVLGCVEMSV 341 HSP 2 Score: 51.9878 bits (123), Expect = 1.330e-6 Identity = 46/225 (20.44%), Postives = 87/225 (38.67%), Query Frame = 2 Query: 1397 FRKQYFNDLEVIGQFNKGFIIARLNQD-----------LFIIDQHASDEKKQFEKF-------------LNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIFMTAVP------------RRNNLVLGTEDLHEMLQII---KDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 F K F L+VI Q +K FI+ L ++DQHA+ E+ + E+ + + M + + P L+ + + +I + G + F + + +T VP R + GT + + + + G +P + + S AC A+ G LS+ + +++ ++ + P+ CAHGRP + L Sbjct: 1157 FTKDMFASLQVIQQVDKKFIVCLCTDKGPERQKGNLNILILVDQHAAHERVRLEQLTAELFEVSEDSADIGKRVMRTSLVVPPMALEFNCHEISLIRSYQGHLERHGLQLAFPAEAV---VHVTGVPACLVERETGEARRGRPPITGTILEELIREELELLQQTGGARGTLPRAIIRVLNSQACHGAVKFGDKLSWDECASLMRDLAKCQLPFQCAHGRPAMMPL 1378
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Yeast
Match: PMS1 (ATP-binding protein required for mismatch repair; required for both mitosis and meiosis; functions as a heterodimer with Mlh1p; binds double- and single-stranded DNA via its N-terminal domain, similar to E. coli MutL [Source:SGD;Acc:S000005026]) HSP 1 Score: 195.282 bits (495), Expect = 2.099e-51 Identity = 115/352 (32.67%), Postives = 184/352 (52.27%), Query Frame = 2 Query: 44 LMNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ--------------------------------KGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDK--NKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNIN---QDILDEF-NISKVANLE-KIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASI 982 + I +IN RI S Q + + A+KEL++NS+DA++ +IEI K++G + IE DNG GI P ++ ++ TSK+ F D+ ++T GFRGEAL+SLC + + KGTTV + +FH LPVR+K+F KR+F K L I Y +I ++ S I K +ILST + +NI SVFG + G+ E+ ++N +L ++ + +L+ KI + G+ISQ + ++ +QF+YVN+RP E + + E Y+ N P +++ LP +DVN+ PDKR++LL N+ V + K ++ Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTL 352 HSP 2 Score: 140.584 bits (353), Expect = 3.419e-34 Identity = 79/211 (37.44%), Postives = 115/211 (54.50%), Query Frame = 2 Query: 1373 AEEELKRIFRKQYFNDLEVIGQFNKGFIIARLN----QDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCI--VMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA**TWSS 1984 E+ L K F +EV+GQFN GFII DLFI+DQHASDEK FE SQ L P+ +++S DE ++ +N+ +F K GF+ + +E E R+ + ++P + D +E++ +IK+ G + ++RS A ACRS+IMIG L+ M +++ +S L PW C HGRPT+RHL L WSS Sbjct: 658 GEKYLTLTVSKNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPWNCPHGRPTMRHLMELR--DWSS 866
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Yeast
Match: MLH1 (Protein required for mismatch repair in mitosis and meiosis; also required for crossing over during meiosis; forms a complex with Pms1p and Msh2p-Msh3p during mismatch repair; human homolog is associated with hereditary non-polyposis colon cancer [Source:SGD;Acc:S000004777]) HSP 1 Score: 117.857 bits (294), Expect = 3.299e-27 Identity = 89/343 (25.95%), Postives = 160/343 (46.65%), Query Frame = 2 Query: 47 MNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKI-DKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYR-VMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVI 970 + IK ++ +I + + ++S A+KE++ENS+DA++ I+I +K G ++++ DNG+GI+ + R TTSKL+ F+DL+ ++T+GFRGEAL S+ + G+ GTT+ + ++F +P R + L + E+ K L+ + Y + + + SC K D N LS + + + I++VF ++ + +I F+ISKV +L + G + F S S ++N R ++R + Y + K + P + I + VDVN+ P KR + +Q E+ I Sbjct: 3 LRIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRA-LRSHNDEYSKILDVVGRYAIHSKDIGFSCKKFGDSNYS--LSVKPSYTVQDRIRTVFNKSVASNLI--------------TFHISKVEDLNLESVDGKVCNLN--FISKKSISPIFFINNRLVTCDLLRRALNSVYSNYLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKI 326
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Yeast
Match: MLH2 (Protein involved in mismatch repair and meiotic recombination; only certain frameshift intermediates are mismatch repair substrates; forms a complex with Mlh1p [Source:SGD;Acc:S000004025]) HSP 1 Score: 73.1738 bits (178), Expect = 2.237e-13 Identity = 88/373 (23.59%), Postives = 158/373 (42.36%), Query Frame = 2 Query: 47 MNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGK--IEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEA---LNSLC---------------FLGQK---------------------GTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQ--ISCCKIDKNKQV------------ILSTRGIGGISENIKSVFGQNQLNGMIE--LTTEHNINQDILDEFNI--SKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCEL-----PKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIK 973 M I +++ ++ +I SS + AA++EL++NS+D+ + K I++ G + I V D+G+G+ + TTSK+ + D++ L T GFRGEA L++LC +G+K GTTV +R + L R + ++ FD+ + I Y LI ++ S + KN + I R + ++ K V LN ++E + IN D++ + S V N+++ FK FL VN R L + +L++ YR + + I+++ + +DVNIEP+K +++ + +F I+ Sbjct: 1 MTIHQLSPESQWKIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKDDGSGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKTADDVIGEKWLVDSKGGITNGKRYKVSCPVGTTVILRKLLGGLRARYLEISSRPRKTFDELIYLINHYSLIHRNIRFYFSLVSLQKNGAIERKQMQETLDPKISRARSLSLLARLKKPV----PLNFIVEENFVIDEKINLDLILPRMVPESDVINIKR------------RFK-------FLSVNERALSLNLETGKTISKLLSSIYRDFSLLDPMVWFINLNCDTKLLDVNIEPEKNDVMIKSFEVIFKKIE 350
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Yeast
Match: MLH3 (Protein involved in DNA mismatch repair and meiotic recombination; involved in crossing-over during meiotic recombination; forms a complex with Mlh1p; mammalian homolog is implicated mammalian microsatellite instability [Source:SGD;Acc:S000006085]) HSP 1 Score: 71.2478 bits (173), Expect = 7.947e-13 Identity = 34/103 (33.01%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 50 NIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIE--IRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSL 352 +I+++++ S+R+ S VS+A+A++E+++NS+DA + I+ I L N V D+G G++ + + ++N TSK+ +DL ++T+G+RG+AL S+ Sbjct: 4 HIRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLS---FAVYDDGIGLTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSI 103
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Nematostella
Match: EDO34014 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQJ8]) HSP 1 Score: 251.521 bits (641), Expect = 4.895e-70 Identity = 129/347 (37.18%), Postives = 205/347 (59.08%), Query Frame = 2 Query: 62 INTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLE--KIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 I+ ++ +ICS Q V+++A A+KEL+ENSLDA + +++RLK G+ IEV DNG G+ P F+ T ++ TSKL++F DL+ +ETFGFRGEAL+SLC L ++GT V++ N+F TLPVR K+FL N+K+EF K ++ + YCLI G +I+C + + ++ST G I +NI +VFG Q+ ++ +D E N+S V+N E ++G+IS+ S+S +QF ++N+RPC+LPKV R+++E Y + N+ P ++ ISL ++ VDVN+ PDKR + L ++ + A ++ S++ F Sbjct: 19 IDRKSVHQICSGQVVLNLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDNGAGVEPQNFEALTLKHYTSKLKDFSDLSAVETFGFRGEALSSLCALSDLSITTRHISQTAGTKLDYDHNGKLKSKLPCAREQGTMVTVLNLFSTLPVRHKEFLRNIKKEFVKLVHVLQGYCLISAGTRITCTNHVSGRRSTVVSTHGSSQIKDNITAVFGPKQVQSLLPFKQLQPSEEDC-TELNLSVVSNSETNPFTITGFISKADHGSGRSSSDRQFFFINKRPCDLPKVSRVVSEVYHMYNRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQETLLLATLRTSLIKMF 364 HSP 2 Score: 192.2 bits (487), Expect = 2.221e-50 Identity = 93/217 (42.86%), Postives = 139/217 (64.06%), Query Frame = 2 Query: 1328 NGK---YKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 NGK ++++IS NN AEEEL R ++ F +E++GQFN GFI+A+L+ DLFIIDQHASDEK FE + +Q L P++L++++ +E I+ +N+++F K GF FQ +A ++ + +VP N G ED+ E++ ++ D + P RVR AS ACR +IM+GT+LS+ QM I++ M +K PW C HGRPT+RH+ LA Sbjct: 553 NGKVRIFRAKISPENNSAAEEELTRNIQRGSFARMEIVGQFNLGFILAKLDNDLFIIDQHASDEKYNFEMQQRNTVLRNQRLIIPRKLELTAVNESILLDNLEIFRKNGFEFQIDDDAPATQKVKLVSVPTSKNWTFGVEDVEELIFMLSD-APGILCRPTRVRKMFASRACRMSIMVGTALSHAQMQGIVRHMGEMKHPWNCPHGRPTMRHVVNLA 768
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Nematostella
Match: EDO31419 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SXZ4]) HSP 1 Score: 249.21 bits (635), Expect = 3.625e-69 Identity = 129/347 (37.18%), Postives = 204/347 (58.79%), Query Frame = 2 Query: 62 INTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEK--IELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 I+ ++ +ICS Q V+S+A A+KEL+ENSLDA + +++RLK G+ IEV DNG G+ P F+ T ++ TSKL++F DL+ +ETFG+RGEAL+SLC L ++GT V++ N+F TLPVR K+FL N+K+EF K ++ + YCLI G +I+C + + ++ST G I +NI +VFG Q+ ++ +D E N+S V+N E ++G+IS+ S+S +QF ++N+RPC+LPKV R+++E Y + N+ P ++ ISL ++ VDVN+ PDKR + L + + A ++ S++ F Sbjct: 19 IDRKSVHQICSGQVVLSLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDNGAGVEPQNFEALTLKHYTSKLKDFSDLSAVETFGYRGEALSSLCALSDLSITTRHISQTAGTKLDYDHNGKLKSKLPCAREQGTMVTVLNLFSTLPVRHKEFLRNIKKEFVKLVHVLQGYCLISAGTRITCSNHVAGKRSTVVSTHGSLQIKDNITAVFGPKQVQSLLPFKQLQPSEEDCT-ELNLSVVSNSESNPFTITGFISKADHGSGRSSSDRQFFFINKRPCDLPKVSRVVSEVYHMYNRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQEKLLLATLRTSLIKMF 364 HSP 2 Score: 186.422 bits (472), Expect = 1.966e-48 Identity = 95/242 (39.26%), Postives = 145/242 (59.92%), Query Frame = 2 Query: 1247 QNISANFSMKYISLLDTNAENDIT-NAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQF-KEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 + + FSM+ + + IT NA ++++IS NN AEEEL + K F +E++GQFN GFI+A+L+ DLFIIDQHASDEK FE + +Q L P++L++++ +E I+ +N+++F K GF FQ +A ++ + +VP N G ED+ E++ ++ D + P RVR AS ACR +IM+GT+LS+ M I+ M ++ PW C HGRPT+RH+ LA Sbjct: 539 KTVEVEFSMEKLRSRSHSLNTSITQNAEVRIFRAKISPENNSAAEEELTKNIEKGSFARMEIVGQFNLGFILAKLDNDLFIIDQHASDEKYNFEMQQRNTVLRNQRLIIPRKLELTAVNESILLDNLEIFRKNGFEFQIDDDAPATQKVKLVSVPTSKNWTFGVEDVEELIFMLSD-APGILCRPTRVRKMFASRACRMSIMVGTALSHAHMQGIVGHMGQMEHPWNCPHGRPTMRHVVNLA 779
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Nematostella
Match: EDO49003 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHM2]) HSP 1 Score: 146.362 bits (368), Expect = 3.731e-38 Identity = 99/349 (28.37%), Postives = 170/349 (48.71%), Query Frame = 2 Query: 74 TSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGN--LKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTE---VFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKT---HNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFL 997 T RI SSQ + S+++A+KEL+EN+LDA + IE++L+ +G + IEV DNGTGI + R+ TSK+ F +L++L ++GFRGEAL SLC + GT V+ N+F LPVR++ GN K E K I ++ LI V+++ + NK +I + + + + G N ++ M E+ + + + + G++ +P V S + F+YVN+RP L ++ +++ E Y ++ T +P +SI +P VDVN+EP+K +LL + + +++ S+ ++ Sbjct: 11 TVHRIASSQVITSVSSAVKELLENALDAGANSIEVKLEEYGLEKIEVRDNGTGIPQDDAQFMAQRHYTSKITTFHNLDSLASYGFRGEALCSLCAVSNVSVMTKTNNEEVGMCYTLDQHGRISATKPLPLTTGTVVTACNLFKNLPVRKQFSRGNKKCKDELKKVEELIMAFGLIHPSVRLT---LRHNKSIIWQKNKCEDLKKALTGIIGANAMSSMEEIIVKDDQT----------------GLRIEGFVPKPGSDPNVTSRSMGDRSFVYVNKRPVVLKEIAQVVREFYLKIHPTISNRHPVAFLSIEVPPCAVDVNLEPNKSRVLLTEKDIIIDLLRNSLEELYV 340
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Nematostella
Match: EDO39827 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8W4]) HSP 1 Score: 99.7525 bits (247), Expect = 3.668e-21 Identity = 78/342 (22.81%), Postives = 155/342 (45.32%), Query Frame = 2 Query: 35 LINLMNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL----------------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQ---FLYVNRRPCELPKVKRLIAECYRV-MNKTHNPTFVISISLPKETVDVNIEPDKR 928 + ++ +I++++ RI + + + A A+KE+IEN LDA S I + +K+ G ++++ DNG GI + R TTSKL F+DL+++ T+GFRGEAL S+ + G KGT +++ ++F+ + RRK L + E+ K ++ ++ Y + GV + K + + +T + +NI++++G ++++ ++ S++ + G I+ ++ S K+ L++N R + ++R + Y + K +P +S+ + VDVN+ P K Sbjct: 1 MADIPSIRKLDETVVNRIAAGEVIQRPANALKEMIENCLDAKSTSITVTVKSGGLKLLQIQDNGCGIRKEDMHIVCERFTTSKLSKFEDLSSISTYGFRGEALASISHVAHVTITTKTAHSSCAYKASYSDGKLVPPRPGLPAEPKPCAGNKGTQITVEDLFYNVATRRKA-LKSPGEEYSKVVDVVSKYSIHNTGVAFTLKKQGEATADVRTT-STASLHDNIRAIYGTAVARELVDIDCDN------------SRLG----FYMKGCITN------ANYSVKKLIFLLFINHRLVDSTALRRSLETVYEAYLPKGTHPFVYMSLQITPSNVDVNVHPTKH 318
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Nematostella
Match: EDO46831 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RP06]) HSP 1 Score: 83.1889 bits (204), Expect = 8.566e-17 Identity = 87/353 (24.65%), Postives = 140/353 (39.66%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSL-----------------------------------CF-LGQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRL----------IAECYRVMNKTHNPT-------------FVISISLPKETVDVNIEPDKRIL 934 I+ ++T + S A+ ++ AI EL+ N+LDA + I + + + + ++V DNG+GI+ + R TSK + DL L ++GFRGEAL S+ CF GTTV+I +IF LPVRRK L +F++ + S LI V D Q L TR ++ +FG + + ++ +EH F +S +E N + QF+Y+N R K+ +L I + M++ P F+I+I+ P DV +EP K ++ Sbjct: 2 IRHLDTGIRSHLRSGVAISTLTQAIDELVTNALDAGASCINVHV-DIPSFRVQVSDNGSGITKDNLEILGQRYCTSKCHSLSDLRKLSSYGFRGEALASIRDICGVLEIVTKHSSSYKTYCKLFRSGKPLTVTQSCFPRSNTGTTVTIHDIFSNLPVRRKLLSSVL--DFERVRQRLLSIALIHPEVSFILFN-DATFQKCLQTRKCLSVTSTFSQLFGNLKARSLKDVFSEHK-------HFKVSGHIGIE---------------PHHNKNLQFVYINSRLLLKTKIHKLLNSMLSKSSFIKQLPSNMSENDVPMRSPPQRSSEKNAIFIINITCPLMVYDVILEPSKTLV 328
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Medaka
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:NCBI gene;Acc:101169320]) HSP 1 Score: 233.417 bits (594), Expect = 3.281e-63 Identity = 122/350 (34.86%), Postives = 209/350 (59.71%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCC-KIDKNKQV-ILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKI-ELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCF 994 IK I+ + +ICS Q V+S+A A+KEL+ENS+DA + I+I+L++ G + IEV DNG G+ F+ T ++ TSKL +F DL ++ETFGFRGEAL+SLC L Q+GTTV+++ +FHTLPVR K+F N+K+E+ K ++ + +YC+I GV+++C + + K+V +LST G + ENI ++FG QL ++ + + ++++L+E+ + + E++ ++G+IS+ S + +QF ++N RPC+ K+ +++ E Y N+ P ++I++ E VDVN+ PDKR + L + + A +K S+++ + Sbjct: 13 IKAIDKHSVHQICSGQVVLSLATAVKELVENSVDAGATNIDIKLRDCGVEQIEVSDNGKGVKEANFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVITCHESSQVGTKLVFDHKGQLVQKSPHPRQQGTTVALQQLFHTLPVRHKEFQRNIKKEYAKMIHVLQAYCIISAGVRLTCSNQSGRGKRVTVLSTSGSQSMRENIGAIFGPKQLQSLLPFQ-QTSPSENVLEEYGLKEAELPEQLFSIAGFISRSDHGVGRSATDRQFFFINNRPCDPLKITKVVNEVYHSYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKVLLATLKTSLINMY 361 HSP 2 Score: 182.57 bits (462), Expect = 1.186e-46 Identity = 86/209 (41.15%), Postives = 133/209 (63.64%), Query Frame = 2 Query: 1334 KYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKE-AELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDY-GSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHL 1954 +++++I+ N++AEEEL++ K F ++++IGQFN GFII +LN D+FIIDQHA+DEK FE + Q L P++L +++ E ++ ENI++F K GF F E A++ R+ + ++P N G D+ E++ ++ D G C P RVR AS ACR ++MIGT+LS +M K++ M ++ PW C HGRPT+RHL Sbjct: 613 RFRAKINPGENQSAEEELRKEISKDMFKEMKIIGQFNLGFIITKLNSDIFIIDQHATDEKYNFEMLQQHTLLQGQKLIAPQKLHLTAISENVLMENIEVFRKNGFEFLIDEDAQVMERVRLVSLPTSKNWTFGPADIEELIFMLSDSPGVMC--RPSRVRQMFASRACRKSVMIGTALSVSEMKKLVVHMGEIEHPWNCPHGRPTMRHL 819
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Medaka
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:NCBI gene;Acc:101157983]) HSP 1 Score: 138.658 bits (348), Expect = 1.530e-32 Identity = 102/365 (27.95%), Postives = 180/365 (49.32%), Query Frame = 2 Query: 17 FYVLN*LINLMNI----KRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGQ---------------------------------KGTTVSIRNIFHTLPVRRKQFLGN--LKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSS---KQFLYVNRRPCELPKVKRLIAE--CYRVMN---KTHNPTFVISISLPKETVDVNIEPDK-RILLLDNQSEVFAV 967 Y LN L +L I K + + + + SSQ + S+ +KEL+ENSLDA + I+++L+NFG D IEV DNG G+ + R+ TSK+ + +DL +LET+GFRGEAL S+C + + +GT+V+ +F LPVRR+ + K E K + + +Y +I +++S + NK V+ + + + G + + +++ + + ILD G++ +P + S++SS K FLYVN RP +L ++ +L+ + C + + + P +++I++ ++DVN+ PDK ++LL D ++ + AV Sbjct: 67 LYPLNGLQHLKRIFGAMKLLPPDSVRLLSSSQVITSVVNVVKELLENSLDAGASSIDVKLENFGLDRIEVRDNGHGVKAADASVMAVRHFTSKICSHEDLEHLETYGFRGEALGSICAVAELIVTTKTEEDDISTQYTLDPTGKIVAQKPSHLGQGTSVTALKLFKNLPVRRQYYTSTKKCKEELKKVQDLLITYAIIKPELRLS---LVHNKVVVWQKTKVADNRSALLATLGPSVVANLLQCHQQQEEPEIILD----------------GFLPKPGADYSSTSSSAPDKTFLYVNNRPVQLKEIMKLLRQHYCAQYLEDAVRNRYPILMLNITVSPSSLDVNLTPDKSQVLLHDKEAVLTAV 412
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Medaka
Match: mlh1 (mutL homolog 1 [Source:NCBI gene;Acc:111948792]) HSP 1 Score: 117.087 bits (292), Expect = 3.644e-26 Identity = 94/370 (25.41%), Postives = 172/370 (46.49%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGI--GGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQF---LYVNRRPCELPKVKRLIAECYRVM--NKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTL 1042 I+R++ RI + + + A A+KE+IEN LDA + I++ +K+ G ++++ DNGTGI + + R TTSKL+ F+DL+++ T+GFRGEAL S+ + G +GT + + ++F+ + RRK L + E+ + + ++ Y + G ++ + K + + R + + +NI+SVFG +I++ E K+A ++SG+IS ++ S K++ L++N R E +K+ + Y KTH P +S+ + + VDVN+ P K + ++ V ++ I L G++ QTL Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKATNIQVTVKDGGLKLLQIQDNGTGIRKDDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYRASYRDGKPRGPPKPCAGNQGTQIMVEDLFYNVSTRRKA-LKSPADEYSRIVEVVSRYAIHNSGKSLT---VKKQGETVADVRTLPNASVVDNIRSVFGNAVSRELIQVGCED------------PKLA----FKMSGYISN------ANYSVKKYVFILFINHRLVESSALKKAVETVYAAYLPKKTH-PFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSVIESVQKHIDGKLL--GFNSSRTFFTQTL 345
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Medaka
Match: mlh3 (mutL homolog 3 [Source:NCBI gene;Acc:101166595]) HSP 1 Score: 71.2478 bits (173), Expect = 8.651e-12 Identity = 46/169 (27.22%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG------------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKRE 451 IK + + ++ S A+ S+ ++EL+ NS+DA + + +R+ + A ++V+DNG G++ + +R TSK + +DL+N+++ GFRGEAL S+ + GTTV + N FH +PVRR++ L+ E Sbjct: 15 IKLLPPEVQGQLRSGVAIPSLQQCVEELVLNSIDAGATCVGVRM-DLEAFKVQVIDNGAGMNTENMQRVGNRYHTSKCGSLEDLDNVKSHGFRGEALASIVSMATLVEISSRSRASAKTLVKLFKDGRGVDVFEAETVRPSAGTTVIVCNFFHNMPVRRRRLDAVLEGE 182 HSP 2 Score: 61.2326 bits (147), Expect = 1.020e-8 Identity = 58/230 (25.22%), Postives = 95/230 (41.30%), Query Frame = 2 Query: 1403 KQYFNDLEVIGQFNKGFIIARLNQD--------------LFIIDQHASDEKKQFEKFLNQC-----EMSSQPLACPKR----LQISSGDEEI--ISENIDLFNKLGFRFQFKEAELNFRIFMTAVP------RRNNLVLG---------TEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPT------IRHL 1954 K + ++V+ Q +K F+ +N L ++DQHA+ E+ + E + E+ + C L+IS +EE+ +S LG F E + IF+ VP N L G E L E ++++ G +PI V +AS AC A+ +L+ + ++ +SS + P+ CAHGRP+ IRHL Sbjct: 869 KAMIHSMKVVDQVDKKFLACLINTREEELASDGDTEGNLLVLVDQHAAHERVRLENLITDSYEDNPEIFGEKWLCSSTIVPPLEISVTEEELRLLSSCRSQLRSLGLEVTFSETQ-RPSIFVGKVPLCFLEKETNELKRGRPSIIKTIVEEYLQEQIELLLSTGRVKRTLPITVLKVLASLACHGAVKFNDTLNRDECHSLVASLSSCQLPFQCAHGRPSIAPLVDIRHL 1097
BLAST of DNA mismatch repair protein PMS2 vs. Planmine SMEST
Match: SMESG000004803.1 (SMESG000004803.1) HSP 1 Score: 1248.03 bits (3228), Expect = 0.000e+0 Identity = 615/651 (94.47%), Postives = 618/651 (94.93%), Query Frame = 2 Query: 113 MAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG---------------------------------QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTHNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLNLSVNVDNSLRSPHVRKHNLRSPDKIQTKFPKLQLSDPNQINSCRKMKLPLVVSQNISANFSMKYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 1966 MAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLG QKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKT+NPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLNLSVNV+NSLRSPH+RKHNLRSPDKIQTKFPKLQLSDPNQINSCRKMKLPLVVSQNISANFSMKYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA Sbjct: 1 MAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGDVEIHTNSLTTSIGSLLKFDQYGKIISLNSVARQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTNNPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLNLSVNVENSLRSPHLRKHNLRSPDKIQTKFPKLQLSDPNQINSCRKMKLPLVVSQNISANFSMKYISLLDTNAENDITNAFNGKYKSEISSNNNRTAEEELKRIFRKQYFNDLEVIGQFNKGFIIARLNQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKLGFRFQFKEAELNFRIFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIASNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTIRHLHCLA 651
BLAST of DNA mismatch repair protein PMS2 vs. Planmine SMEST
Match: SMESG000011828.1 (SMESG000011828.1) HSP 1 Score: 116.701 bits (291), Expect = 3.877e-26 Identity = 92/329 (27.96%), Postives = 154/329 (46.81%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFL---------------------------------GQKGTTVSIRNIFHTLPVRRKQFLGNLKREFDKALNYITSYCLI-CEGVQISCCKIDKNKQVILSTRGIG--GISENIKSVFGQNQLNGMIELTTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQF-LYVNRRPCELPKVKRLIAECY-RVMNKTHNPTFVISISLPKETVDVNIEPDK 925 IK+++ +I + + + A AIKEL+ENSLDA+S +I I +K G +I++ DNG+GI +F + TTSKL+ F DL + TFGFRGEAL S+ + G GT V + ++F+ +P+R+ L + + E+ K + +++Y ++ I+ KID N R + I + + +FG ++ + ++ D LD F LSG IS+P +N +F L++N+R +K+ I Y ++ K P + + LP + +DVN+ P K Sbjct: 7 IKKLDDNVINKIAAGEIIQRPANAIKELLENSLDANSTQIIISVKQGGLGVIQIQDNGSGICKEDFPILCEKFTTSKLQEFHDLLTISTFGFRGEALASVTHVAHVQITSKTIDSPCAYKAEFSNSKLLKPPKPCAGNTGTIVRVEDLFYNIPIRKAS-LKSAREEYSKIIEVVSNYAILNAHKCSITLKKIDDNATSSPDVRIVAETSIEDCVVELFGGELSKQLLTI----DLKNDKLDFF------------LSGRISKPN----YNNRKFRFILFINQRLVHCDLLKKSIENVYGNLLPKHTYPFAFLHLQLPSKNIDVNVHPTK 314
BLAST of DNA mismatch repair protein PMS2 vs. Planmine SMEST
Match: SMESG000066771.1 (SMESG000066771.1) HSP 1 Score: 115.161 bits (287), Expect = 7.100e-26 Identity = 114/389 (29.31%), Postives = 181/389 (46.53%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCF-------------------------LGQ----------KGTTVSIRNIFHTLPVRRKQF--LGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIEL----TTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECY-RVMNKTHN--PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLN 1087 +K++N T + I SS + S+ IKEL+ENS+DA + +I I LK FG D IEV+D+G G + R+ TSK+ F D+ + TFGFRGE L+S+C +GQ +GTT+++ NIFH LPVR + + L L++ + L + I K+ + V+L+ E I V G ++ EL TTE N ++ L+ F S V +K+ L+ +L+VN RP E+ + + + Y + N+ N P+ V+ ++LPK VDVNI+P+KR + L N ++ I+ + L+ Y ++N+ L + NN Y +N Sbjct: 1 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSALGKNWVFDKMGQIMAHSAVTCKQGTTITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHI---KLLNDNNVVLNLPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDN-HEMSLNLFVPSSVD--DKLGLT----------HCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTN-----LRKFYESLPNNVNEELPVA-----NNGYNIN 361
BLAST of DNA mismatch repair protein PMS2 vs. Planmine SMEST
Match: SMESG000066771.1 (SMESG000066771.1) HSP 1 Score: 115.161 bits (287), Expect = 1.292e-25 Identity = 114/389 (29.31%), Postives = 181/389 (46.53%), Query Frame = 2 Query: 53 IKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCF-------------------------LGQ----------KGTTVSIRNIFHTLPVRRKQF--LGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIEL----TTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECY-RVMNKTHN--PTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLN 1087 +K++N T + I SS + S+ IKEL+ENS+DA + +I I LK FG D IEV+D+G G + R+ TSK+ F D+ + TFGFRGE L+S+C +GQ +GTT+++ NIFH LPVR + + L L++ + L + I K+ + V+L+ E I V G ++ EL TTE N ++ L+ F S V +K+ L+ +L+VN RP E+ + + + Y + N+ N P+ V+ ++LPK VDVNI+P+KR + L N ++ I+ + L+ Y ++N+ L + NN Y +N Sbjct: 1 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSALGKNWVFDKMGQIMAHSAVTCKQGTTITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHI---KLLNDNNVVLNLPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDN-HEMSLNLFVPSSVD--DKLGLT----------HCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTN-----LRKFYESLPNNVNEELPVA-----NNGYNIN 361
BLAST of DNA mismatch repair protein PMS2 vs. Planmine SMEST
Match: SMESG000007016.1 (SMESG000007016.1) HSP 1 Score: 53.9138 bits (128), Expect = 1.777e-7 Identity = 50/187 (26.74%), Postives = 84/187 (44.92%), Query Frame = 2 Query: 1424 EVIGQFNKGFIIARL-----NQDLFIIDQHASDEKKQFEKFLNQCEMSSQPLACPKRLQISSGDEEIISENIDLFNKL--GFRFQFKEAELNFR-IFMTAVPRRNNLVLGTEDLHEMLQIIKDYGSTCIVMPIRVRSAIA-----SNACRSAIMIGTSLSYVQMDKILKQMSSLKDPWTCAHGRPTI 1945 +IGQF FI A+ N +F IDQHA+ E+ E +C+ C K+ + + + E D N + F F + + +F ++T P L+L E L + D S+ + P + + I S AC +AI G L+ +M +++ ++ P+ CAHGRP++ Sbjct: 20 HIIGQFENKFIFAKSSLKTGNLLIFAIDQHAAHERILLEDLQRKCKTKH----CLKQCHLVTPVKLRKLEYFDGINSVIEKFGFLLRPCQSSFHSCYLTKAPL---LLLKNEKLTVPELKVVDIISSILNDPKKDKENIMIDILKSKACCNAIKFGDILTEDEMQRLINDLAKCSLPFQCAHGRPSV 199 The following BLAST results are available for this feature:
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 4
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of DNA mismatch repair protein PMS2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of DNA mismatch repair protein PMS2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30014562 ID=SMED30014562|Name=DNA mismatch repair protein PMS2|organism=Schmidtea mediterranea sexual|type=transcript|length=4559bpback to top protein sequence of SMED30014562-orf-1 >SMED30014562-orf-1 ID=SMED30014562-orf-1|Name=SMED30014562-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=641bp MNIKRINTQTSQRICSSQAVVSMAAAIKELIENSLDADSGKIEIRLKNFGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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