U2 snRNP-associated SURP motif-containing protein

Overview


Name	U2 snRNP-associated SURP motif-containing protein
Smed ID	SMED30014392
Length (bp)	3003

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of U2 snRNP-associated SURP motif-containing protein (SMED30014392) t-SNE clustered cells

Violin plots show distribution of expression levels for U2 snRNP-associated SURP motif-containing protein (SMED30014392) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of U2 snRNP-associated SURP motif-containing protein (SMED30014392) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30014392

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30014392	SMESG000026341.1	SmedASXL_012975	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30014392	SMESG000026341.1	SmedASXL_012975	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
protonephridia	SMED30014392	SMESG000026341.1	dd_Smed_v4_3029_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30014392	SMESG000026341.1	dd_Smed_v4_3029_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30014392	SMESG000026341.1	dd_Smed_v4_3029_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
Match: U2SURP (U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855])

HSP 1 Score: 500.745 bits (1288), Expect = 2.812e-160
Identity = 321/755 (42.52%), Postives = 438/755 (58.01%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S        +  P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS--------MDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 785

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
Match: U2SURP (U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855])

HSP 1 Score: 496.123 bits (1276), Expect = 1.502e-158
Identity = 320/756 (42.33%), Postives = 436/756 (57.67%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSE--TDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S             P+    S    D+   S    D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L   S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRSM----------DAPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQANSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 784

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
Match: U2SURP (U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855])

HSP 1 Score: 219.164 bits (557), Expect = 6.298e-62
Identity = 155/340 (45.59%), Postives = 208/340 (61.18%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTH-SSEGAGKLYQPLMKTVDKI--PDKFKEKFQSEF----NKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQ 1109
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+   P++   +          KKPPL     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S        +  P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R+
Sbjct:  115 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKG--EKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS--------MDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERR 428

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
Match: U2SURP (U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855])

HSP 1 Score: 208.764 bits (530), Expect = 1.966e-58
Identity = 144/304 (47.37%), Postives = 188/304 (61.84%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTH-SSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQ 992
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S        +  P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS--------MDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK 392

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
Match: PABPC1 (poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554])

HSP 1 Score: 60.077 bits (144), Expect = 1.888e-8
Identity = 25/81 (30.86%), Postives = 51/81 (62.96%), Query Frame = 3

Query:  636 TNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGK 878
            TN+++ N   ++ +++L +LFG+FGP  SVK+M     +E  + +  GFV+F    D ++A++++ G E+ G ++ +G  +
Sbjct:  159 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM----TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQ 235

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Celegans
Match: C07H6.4 (pep chromosome:WBcel235:III:7499677:7503241:1 gene:WBGene00015581.1 transcript:C07H6.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C07H6.4)

HSP 1 Score: 280.796 bits (717), Expect = 5.134e-80
Identity = 181/592 (30.57%), Postives = 307/592 (51.86%), Query Frame = 3

Query:  321 KKPPLLG--KPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLP--ATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQP-----REWLQKTGNVDSRKMF-DMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPP-PLNPFTSGIPEEL-------------IEDIDFSKLTLENISQTLNNADS--SKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAK-VRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE 2015
            ++PP  G  K K+   + S +E F  EL+++Q++RE    K+K +   +E +                     D  ++  + P        +S FD D PY       TTN+++ N+   +TE  L   FG FGPLA++KI++PRS+EE+ R   C FVAFM+R+D +R + ++R   +    ++  + + V IP  P Y+PP+L  +  P P S LPFNAQP     +++L+K                  ED  E ++N  ++V +P DR+L+++++RM  +V+ EG +FEA I  +E +NP F+FL+D  S  HVYYRW++YS L G++ + W+   F M++ G +W PP P+N     +P+EL             ++  D  +      S+   N+D+   +    +  E   +    N      +++D +R++L  ++ +L P K SI   MVWC+++A  A ++ + +   +          +IE+     L + ++ L+L++DIL N   + VR+   YR + E  L ++ V + + Y  I S+IK EQ K +V+  FR + +  VYP D L   +N FLG++E
Sbjct:  122 QRPPKPGSSKAKQDKPKISQMEMFKMELQRVQEDRE----KRKDLRHHLEKVG-------------------MDQAVVERLAPTVERGFQGTSEFDDD-PY-------TTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDRFMAEVRVIIVRNEPIRFAFARPVQIPAIPYYIPPVLHALQHPDPTSNLPFNAQPDCADAKKFLEKYNTFPPMHALPTKGQYGYEDFTELIRNSQIRVVVPPDRKLVRVMDRMAVYVVTEGPQFEAMICAEEFQNPMFQFLWDNTSALHVYYRWRIYSLLQGDTIEEWRRTPFRMFENGSWWIPPYPINELRDAMPKELYHMNCLRTYPDKWMKVRDGGQRRGGESSKNRRNSDAEKEERKMRREEEKERKRREKNEKKRNNRMSDKRRDKLETLIRELTPEKTSIAATMVWCIQNAKYAAEICECVYDSL----------TIED---IPLYKKISRLYLINDILSNCVQRNVRDVFLYRSHFEALLEKIFVAVGKAYRAIPSRIKQEQFKQRVMCVFRNFEEMAVYPTDKLIHNQNVFLGLIE 669

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Celegans
Match: tiar-3 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q93194])

HSP 1 Score: 51.6026 bits (122), Expect = 2.043e-6
Identity = 27/113 (23.89%), Postives = 57/113 (50.44%), Query Frame = 3

Query:  618 ETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIP-----PHPIYVPPILMEMIKP 941
             T    T++++GN++ + T+  L +LF  +G +A V+I          + +   FV +  +    +A+ ++ G E+ G +++  WG+T  +P     P PI +  ++M  + P
Sbjct:  321 STKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF---------KTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGRTQAVPNQALNPLPIDLSSLMMPTMLP 424

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
Match: CG9346 (gene:FBgn0034572 transcript:FBtr0071526)

HSP 1 Score: 491.5 bits (1264), Expect = 5.256e-158
Identity = 306/783 (39.08%), Postives = 433/783 (55.30%), Query Frame = 3

Query:   87 EEARKLQANEETAIVYQQFIETFEEPPK-VNKTWVKGGTVNPGSSTHSSEGAGKLYQPLMKTV-----DKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSD-EDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLG--IVEPP--ALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPLDSKAT----------EATNST---------EIL----------DMFANPSSPQTKRITKEPLFVPSKWETVDPADEESE-IVQSRWQLME 2312
            E+ +K +     A  +++F+ETF++ P   +K WVK GT + GS        GKLY+P+ K +     DK+ D + +   S+  K    L K K Q K+KSNLE F EEL+Q+Q+ERE R++ + + +               + +S     S+             ++  S  FD   P        TTNL+LGNLNP+++EQQL E+FGR+GPLAS+KIMWPRS+EEK RGRNCGFVA+M+R D ERAL+ L G  I GYEM+LGWGKTV I   PI+ P  L+EM  PPPPSGLPFNAQP        +V  +K +   +  D E++   L  CVVKV IPT++ +L +I+RM+EFVIREG  FEA IM +EM NP F FLFD +SP H+YYRWKL+S L G++   W+ +EF M+K GP W+PP  N +T G+P+EL+ D D                                       V+K  L+++QR RL +++  L P +  IG+AM++C+EHAD+A+++ + I             +S+ N N     +I A L+L+SDILHN   KV NASF+RK +E  L  +  +L+ YYL I S++K+E  K +V +  R W +W +YP DF+ +L  +FLG   V+P   +   E++    + +  +   PL   + D  D+DGVPLD  A           +A   T         E L          D+   P   +TK   K P F+PSKWETVDP   E++ I  S+W  ++
Sbjct:   45 EDQKKKEDAAAAAHAFKEFVETFQDAPTPSSKVWVKAGTYDAGSRREDKSEKGKLYKPVSKLMEKSSSDKVED-YAKTLASDLKKDSGPLKK-KNQEKKKSNLELFKEELRQIQEEREERHKYKHMASSHSAPAQQPAASAAPVPSSSVSTTSQNSS----------SSKESGSFDTGDP-------NTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWGKTVPIMNTPIFTPQALLEMTLPPPPSGLPFNAQPP---PSEADVLPKKNYKEFNQEDKENMERILAKCVVKVHIPTEKAVLNVIHRMIEFVIREGPMFEALIMIREMENPLFAFLFDNESPAHIYYRWKLFSLLQGDTPNEWREEEFRMFKNGPVWKPPIANFYTQGMPDELVVDPDAPV------------------------------------VHKGALSNAQRNRLEDLIRHLTPERARIGDAMIFCIEHADAADEICECIA------------ESLSNINTLASKKI-ARLYLISDILHNCTVKVANASFFRKSVEKQLLDIFDNLHNYYLNIESRLKAEGFKSRVCNVIRTWEEWTIYPKDFMAQLTAKFLGKPYVKPVNNSPQAEETRFDEALDEDIDGAPLSGEEKDDEDLDGVPLDGAALLKSALKRAIPDADAGTPKRDTPKKDEYLDEIDGIPLDDDLDGVPLEKETKSTAKLPGFIPSKWETVDPQQVEAQAITTSKWDTLD 756

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
Match: Caper (gene:FBgn0031883 transcript:FBtr0089640)

HSP 1 Score: 54.299 bits (129), Expect = 5.678e-7
Identity = 26/76 (34.21%), Postives = 46/76 (60.53%), Query Frame = 3

Query:  642 LFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            L++G+L+  +TE  L  +F  FG + +++++    D E  R +  GF+ + N  D ++ALE+L G E+ G  MK+G
Sbjct:  337 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIM---DTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVG 409

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
Match: Caper (gene:FBgn0031883 transcript:FBtr0089636)

HSP 1 Score: 54.299 bits (129), Expect = 5.678e-7
Identity = 26/76 (34.21%), Postives = 46/76 (60.53%), Query Frame = 3

Query:  642 LFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            L++G+L+  +TE  L  +F  FG + +++++    D E  R +  GF+ + N  D ++ALE+L G E+ G  MK+G
Sbjct:  337 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIM---DTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVG 409

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084592)

HSP 1 Score: 50.8322 bits (120), Expect = 4.653e-6
Identity = 23/86 (26.74%), Postives = 47/86 (54.65%), Query Frame = 3

Query:  639 NLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPP 896
            ++F+G+L+PE+  + L E F  FG +++ +I+    D    + +   FV+F+ +++ E A++ + G  I    ++  W    L PP
Sbjct:   96 HIFVGDLSPEIETETLREAFAPFGEISNCRIV---RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPP 178

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084594)

HSP 1 Score: 50.8322 bits (120), Expect = 4.653e-6
Identity = 23/86 (26.74%), Postives = 47/86 (54.65%), Query Frame = 3

Query:  639 NLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPP 896
            ++F+G+L+PE+  + L E F  FG +++ +I+    D    + +   FV+F+ +++ E A++ + G  I    ++  W    L PP
Sbjct:   96 HIFVGDLSPEIETETLREAFAPFGEISNCRIV---RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPP 178

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Zebrafish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 478.404 bits (1230), Expect = 3.383e-153
Identity = 318/788 (40.36%), Postives = 436/788 (55.33%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDK---IPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPAT-------------LPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV--EPPALXXXXXXXXXXXXXLLSVKPLV--DYDGDPL-DVDGVPLDSKATEATNSTEILDMFANPSSPQTKRI--TKEPLF--VPSKWETVDPADEESEIV-QSRWQLME 2312
            I KM+   R  T++   ++E +K +     A +Y++F+  FE      KT+V+GG  N      ++ E  GKLY+P  + V+    +P +  ++F    +K+     K  ++ K+KSNLE F EELKQ+Q+ER+ R++ +  V                         SRF+        PLP T              PSS  D   P   +  D TTTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFM R D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQP+E L+             C    E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++FLF+ QSP HVYYRWKLY+ L GES   WKT++F M+K G  WRPPPLNP+  G PE                          +   +   E+C           K  L D +R++L E+L  L P K  I   M +CL HAD+AE++++ I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V+SCFRAW +W VYP  FL KL+N FLG+V  +P    EE       +   +   P+V  + DG PL DVDG+P+D    +  +  ++  M    +      +   ++P F   PSKWE VD A  E++ V  S+W++ +
Sbjct:   27 IGKMAVAKR--TLSKKEQDEIKKKEDERAAAEIYEEFLAAFEGGEGKVKTFVRGGIANATKEEAAADEKKGKLYKPKSRIVEAKSFLPLETPQQFLP-IDKRNA--SKKGDKEKKKSNLELFKEELKQIQEERDERHRLKGRV-------------------------SRFE--------PLPTTEGRRSSDGSSRRNRPSSVLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPKERLKNPNAAMPPPP--KCK---EEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYTILQGESPTKWKTEDFRMFKNGSLWRPPPLNPYLHGTPE------------------------DEEHEDDDDEEICK----------KGSLKDEERDKLEELLRGLTPRKSDIAGGMFFCLTHADAAEEIVECIAESL----------SILKTP---LPKKIARLYLVSDVLYNSSAKVTNASYYRKFFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEEWAVYPDPFLIKLQNIFLGLVSLDPEKEPEELVPELPEKVEDIDGAPIVEEELDGAPLDDVDGMPIDGAPIDGASMDDLDGMPIKGADDDLDGVPLDQKPGFKVAPSKWEAVDGAALEAQAVTTSKWEIFD 724

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Zebrafish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 477.633 bits (1228), Expect = 1.982e-152
Identity = 318/788 (40.36%), Postives = 436/788 (55.33%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDK---IPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPAT-------------LPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV--EPPALXXXXXXXXXXXXXLLSVKPLV--DYDGDPL-DVDGVPLDSKATEATNSTEILDMFANPSSPQTKRI--TKEPLF--VPSKWETVDPADEESEIV-QSRWQLME 2312
            I KM+   R  T++   ++E +K +     A +Y++F+  FE      KT+V+GG  N      ++ E  GKLY+P  + V+    +P +  ++F    +K+     K  ++ K+KSNLE F EELKQ+Q+ER+ R++ +  V                         SRF+        PLP T              PSS  D   P   +  D TTTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFM R D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQP+E L+             C    E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++FLF+ QSP HVYYRWKLY+ L GES   WKT++F M+K G  WRPPPLNP+  G PE                          +   +   E+C           K  L D +R++L E+L  L P K  I   M +CL HAD+AE++++ I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V+SCFRAW +W VYP  FL KL+N FLG+V  +P    EE       +   +   P+V  + DG PL DVDG+P+D    +  +  ++  M    +      +   ++P F   PSKWE VD A  E++ V  S+W++ +
Sbjct:   27 IGKMAVAKR--TLSKKEQDEIKKKEDERAAAEIYEEFLAAFEGGEGKVKTFVRGGIANATKEEAAADEKKGKLYKPKSRIVEAKSFLPLETPQQFLP-IDKRN--ASKKGDKEKKKSNLELFKEELKQIQEERDERHRLKGRV-------------------------SRFE--------PLPTTEGRRSSDGSSRRNRPSSVLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPKERLKNPNAAMPPPP--KCK---EEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYTILQGESPTKWKTEDFRMFKNGSLWRPPPLNPYLHGTPE------------------------DEEHEDDDDEEICK----------KGSLKDEERDKLEELLRGLTPRKSDIAGGMFFCLTHADAAEEIVECIAESL----------SILKTP---LPKKIARLYLVSDVLYNSSAKVTNASYYRKFFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEEWAVYPDPFLIKLQNIFLGLVSLDPEKEPEELVPELPEKVEDIDGAPIVEEELDGAPLDDVDGMPIDGAPIDGASMDDLDGMPIKGADDDLDGVPLDQKPGFKVAPSKWEAVDGAALEAQAVTTSKWEIFD 724

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Zebrafish
Match: zgc:163098 (zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141])

HSP 1 Score: 460.685 bits (1184), Expect = 5.453e-147
Identity = 299/804 (37.19%), Postives = 419/804 (52.11%), Query Frame = 3

Query:  120 TAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSSE-GAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPL--------LGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEP------------PALXXXXXXXXXXXXXLLSVKPLVDYDGDPLD-----VDGVPLDS-KATEATNSTEILDMFA-NPSSPQTKRITKEPLFVPSKWETVD----PADEESEIVQSRWQLMESQSEDKKSSDNEDP----DGYPLSDNDENFNLSMIKSHDL 2420
             A V+++F+  F+   K   KT+V+GG VN      ++E    KLY+P              KF +      P+        + K K + K+KSNLE F EELKQ+Q+ERE R +++K       D    F+ + E       R+S FD +            P+ P              TTNL++G +NP++TE+ LC+ FG++GPLASVKIMWPR++EE+ R  N GFVAFM R D ERAL  L G  + G+EMKLGWGK V IPP P+Y P  +++   PPPPSGLPFNAQPR+  +              S S +D  +TL   VV V IP +R LL LI+RM+EFV+REG  FEA IMN+E  NP+F+FLFD +S EHVYYRWKLYS L GE+  +W+T  F M++GG  W+PP LNP+  G  +E  E+  F                                P       K QL    RE+L  +L  L P +  IG+AM++CLE A++AE+++  I   +  +I +             L + +A L+L+SDIL+NSCAKV NAS+YRK+ E  LP++   +++ Y  I +++++EQ K +++ CFRAW DW VYP  FL +L+N FLG+++P            P L     +    +   +   PL D DG PL      +DGVP+D        NS + +D    +  S +T      P    SKWE VD     A  +S+   +   L E+  +   SSD  D     +G     + +NF LS  K   L
Sbjct:   31 AAEVFEEFLAAFDTNDKSGVKTFVRGGIVNATKEEEAAEVKKSKLYRP------------SAKFSAPLQNTSPVHHAEVKKAVAKKKVEEKKKSNLELFKEELKQIQEEREERYKRKK------GDSGAVFLGDLEPLT----RRSIFDDD------------PAVP-------------NTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRND-------FTKPRSRSQDDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAMIMNREKNNPDFRFLFDNKSQEHVYYRWKLYSILQGENPNNWRTSSFRMFRGGSLWKPPLLNPYLHG--DEEPEEASF--------------------------------PSPEEEPKKGQLKSEHREKLEVLLRGLTPRRDEIGDAMLFCLERAEAAEEIVSCITESL--SIAHTP-----------LQKKIARLYLISDILYNSCAKVANASYYRKFFETKLPEIFGDISEAYRNIQARLQAEQFKQRIMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIERPEPESPDLDGAPLDGVPLDRGEIDGTPLDDLDGSPLTWDPSAIDGVPVDDIDGVPLGNSVDDIDGVPFDEGSDKTL-----PTVALSKWEKVDDSESSAKNDSDNEVNSGGLKENSGDSDTSSDEADSPSRFEGADFKSSLKNFELSESKRTRL 728

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Query:  120 TAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSSE-GAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPL--------LGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEP------------PALXXXXXXXXXXXXXLLSVKPLVDYDGDPLD-----VDGVPLDS-KATEATNSTEILDMFA-NPSSPQTKRITKEPLFVPSKWETVD----PADEESEIVQSRWQLMESQSEDKKSSDNEDP----DGYPLSDNDENFNLSMIKSHDL 2420
             A V+++F+  F+   K   KT+V+GG VN      ++E    KLY+P              KF +      P+        + K K + K+KSNLE F EELKQ+Q+ERE R +++K       D    F+ + E       R+S FD +            P+ P              TTNL++G +NP++TE+ LC+ FG++GPLASVKIMWPR++EE+ R  N GFVAFM R D ERAL  L G  + G+EMKLGWGK V IPP P+Y P  +++   PPPPSGLPFNAQPR+  +              S S +D  +TL   VV V IP +R LL LI+RM+EFV+REG  FEA IMN+E  NP+F+FLFD +S EHVYYRWKLYS L GE+  +W+T  F M++GG  W+PP LNP+  G  +E  E+  F                                P       K QL    RE+L  +L  L P +  IG+AM++CLE A++AE+++  I   +  +I +             L + +A L+L+SDIL+NSCAKV NAS+YRK+ E  LP++   +++ Y  I +++++EQ K +++ CFRAW DW VYP  FL +L+N FLG+++P            P L     +    +   +   PL D DG PL      +DGVP+D        NS + +D    +  S +T      P    SKWE VD     A  +S+   +   L E+  +   SSD  D     +G     + +NF LS  K   L
Sbjct:   31 AAEVFEEFLAAFDTNDKSGVKTFVRGGIVNATKEEEAAEVKKSKLYRP------------SAKFSAPLQNTSPVHHAEVKKAVAKKKVEEKKKSNLELFKEELKQIQEEREERYKRKK------GDSGAVFLGDLEPLT----RRSIFDDD------------PAVP-------------NTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRND-------FTKPRSRSQDDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAMIMNREKNNPDFRFLFDNKSQEHVYYRWKLYSILQGENPNNWRTSSFRMFRGGSLWKPPLLNPYLHG--DEEPEEASF--------------------------------PSPEEEPKKGQLKSEHREKLEVLLRGLTPRRDEIGDAMLFCLERAEAAEEIVSCITESL--SIAHTP-----------LQKKIARLYLISDILYNSCAKVANASYYRKFFETKLPEIFGDISEAYRNIQARLQAEQFKQRIMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIERPEPESPDLDGAPLDGVPLDRGEIDGTPLDDLDGSPLTWDPSAIDGVPVDDIDGVPLGNSVDDIDGVPFDEGSDKTL-----PTVALSKWEKVDDSESSAKNDSDNEVNSGGLKENSGDSDTSSDEADSPSRFEGADFKSSLKNFELSESKRTRL 728

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Zebrafish
Match: zgc:163098 (zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141])

HSP 1 Score: 459.914 bits (1182), Expect = 1.107e-146
Identity = 299/809 (36.96%), Postives = 416/809 (51.42%), Query Frame = 3

Query:  120 TAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSSE-GAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRK-------------SNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEP------------PALXXXXXXXXXXXXXLLSVKPLVDYDGDPLD-----VDGVPLDS-KATEATNSTEILDMFA-NPSSPQTKRITKEPLFVPSKWETVD----PADEESEIVQSRWQLMESQSEDKKSSDNEDP----DGYPLSDNDENFNLSMIKSHDL 2420
             A V+++F+  F+   K   KT+V+GG VN      ++E    KLY+P              KF +     PP    P   ++ K             SNLE F EELKQ+Q+ERE R +++K       D    F+ + E       R+S FD +            P+ P              TTNL++G +NP++TE+ LC+ FG++GPLASVKIMWPR++EE+ R  N GFVAFM R D ERAL  L G  + G+EMKLGWGK V IPP P+Y P  +++   PPPPSGLPFNAQPR+  +              S S +D  +TL   VV V IP +R LL LI+RM+EFV+REG  FEA IMN+E  NP+F+FLFD +S EHVYYRWKLYS L GE+  +WKT  F M++GG  W+PP LNP+  G  +E  E+  F                                P       K QL    RE+L  +L  L P +  IG+AM++CLE A++AE+++  I   +  +I +             L + +A L+L+SDIL+NSCAKV NAS+YRK+ E  LP++   +++ Y  I +++++EQ K +++ CFRAW DW VYP  FL +L+N FLG+++P            P L     +    +   +   PL D DG PL      +DGVP+D        NS + +D    +  S +T      P    SKWE VD     A  +S+   +   L E+  +   SSD  D     +G     + +NF LS  K   L
Sbjct:   31 AAEVFEEFLAAFDTNDKSGVKTFVRGGIVNATKEEEAAEVKKSKLYRP------------SAKFSA-----PPQNTSPVHHTEVKKAVAKKKVEEKKKSNLELFKEELKQIQEEREERYKRKK------GDSGAVFLGDLEPLT----RRSIFDDD------------PAVP-------------NTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRND-------FTKPRSRSQDDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAMIMNREKNNPDFRFLFDNKSQEHVYYRWKLYSILQGENPNNWKTSSFRMFRGGSLWKPPLLNPYLHG--DEEPEEASF--------------------------------PSPEEEPKKGQLKSEHREKLEVLLRGLTPRRDEIGDAMLFCLERAEAAEEIVSCITESL--SIAHTP-----------LQKKIARLYLISDILYNSCAKVANASYYRKFFETKLPEIFGDISEAYRNIQARLQAEQFKQRIMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIERPEPESPDLDGAPLDGVPLDRGEIDGTPLDDLDGSPLTWDPSAIDGVPVDDIDGVPLGNSVDDIDGVPFDEGSDKTL-----PTVALSKWEKVDDSESSAKNDSDNEVNSGGLKENSGDSDTSSDEADSPSRFEGADFKSSLKNFELSESKRTRL 728

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:100216247])

HSP 1 Score: 507.294 bits (1305), Expect = 3.885e-163
Identity = 334/784 (42.60%), Postives = 456/784 (58.16%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKE-KFQSEFNKKPP---LLGKPKE-------QSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV-----EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
            I KMS  ++ +T++   ++E +K +  +  A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GKLY+P          +F E K Q   N++PP   +LG+PK+       + K+KSNLE F EELKQ+Q+ER+ R+ K K  T R E         P   +++  R+   D       +   A    +P   D       D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  +  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  M      + E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P     + K  L + QR++L EIL  L P K+ IGEAM++CL HA++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y  I   ++SE  K +V++CFRAW DW +YP  +L +L+N FLG+V     EP  + ++     + EE  L V  + D DG P  +DG P+D        S E  D+   P          EP+F   PSKWE VD ++ ES+ V  S+W+L +  
Sbjct:   65 IGKMSAAAK-RTLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGDASKV-KTFVRGGIVNATKEEHEADEKRGKLYKP--------SSRFSEPKSQQSSNERPPPPIILGEPKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERH-KTKGRTSRFE---------PPQTDTDTQRRL-MDTPSSRRSRSSGALDDYAPGSHDV-----GDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMVMNFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPMM--PLPKNKEEFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQAPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMAEE------------------------------QEAEPFVEEP-----IKKGSLKEEQRDKLEEILRGLTPRKNDIGEAMMFCLNHAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKYFEAKLCQIFADLNAAYRAIQGHLQSENFKQRVMACFRAWEDWAIYPEPYLIRLQNIFLGLVNIEDKEPEEVPDDLDGAPIEEE--LDVPLIEDVDGIP--IDGAPIDDLDGVPIKSLED-DLDGVPLDINDDAKKNEPIFKVAPSKWEAVDESELESQAVTTSKWELFDQH 764

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:100216247])

HSP 1 Score: 420.239 bits (1079), Expect = 1.132e-133
Identity = 242/525 (46.10%), Postives = 323/525 (61.52%), Query Frame = 3

Query:  597 IDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV-----EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPL------DVDGVPLDS 2138
            + F        T ++    +++ ++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  +  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  M      + E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P     + K  L + QR++L EIL  L P K+ IGEAM++CL HA++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y  I   ++SE  K +V++CFRAW DW +YP  +L +L+N FLG+V     EP  + ++     + EE  L V  + D DG P+      D+DGVP+ S
Sbjct:  153 LSFCIQYHGGATNSDSIFVSMHHQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMVMNFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPMM--PLPKNKEEFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQAPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMAEE------------------------------QEAEPFVEEP-----IKKGSLKEEQRDKLEEILRGLTPRKNDIGEAMMFCLNHAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKYFEAKLCQIFADLNAAYRAIQGHLQSENFKQRVMACFRAWEDWAIYPEPYLIRLQNIFLGLVNIEDKEPEEVPDDLDGAPIEEE--LDVPLIEDVDGIPIDGAPIDDLDGVPIKS 622

HSP 2 Score: 54.299 bits (129), Expect = 1.011e-6
Identity = 50/138 (36.23%), Postives = 77/138 (55.80%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKE-KFQSEFNKKPP---LLGKPKE-------QSKRKSNLEAFSEELKQ 404
            I KMS  ++ +T++   ++E +K +  +  A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GKLY+P          +F E K Q   N++PP   +LG+PK+       + K+KSNLE F EELK 
Sbjct:   19 IGKMSAAAK-RTLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGDASKV-KTFVRGGIVNATKEEHEADEKRGKLYKP--------SSRFSEPKSQQSSNERPPPPIILGEPKKPPLKKGEKEKKKSNLELFKEELKH 146

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:100216247])

HSP 1 Score: 408.297 bits (1048), Expect = 1.185e-126
Identity = 306/784 (39.03%), Postives = 419/784 (53.44%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKE-KFQSEFNKKPP---LLGKPKE-------QSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV-----EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
            I KMS  ++ +T++   ++E +K +  +  A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GKLY+P          +F E K Q   N++PP   +LG+PK+       + K+KSNLE F EELKQ+Q+ER+ R+ K K  T R E         P   +++  R+   D       +   A    +P   D       D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  +  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  M      + E+  + +K                   +++ FV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L                      RP  LN            DID SK  L  ++    N              C                  QR++L EIL  L P K+ IGEAM++CL HA++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y  I   ++SE  K +V++CFRAW DW +YP  +L +L+N FLG+V     EP  + ++     + EE  L V  + D DG P  +DG P+D        S E  D+   P          EP+F   PSKWE VD ++ ES+ V  S+W+L +  
Sbjct:   34 IGKMSAAAK-RTLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGDASKV-KTFVRGGIVNATKEEHEADEKRGKLYKP--------SSRFSEPKSQQSSNERPPPPIILGEPKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERH-KTKGRTSRFE---------PPQTDTDTQRRL-MDTPSSRRSRSSGALDDYAPGSHDV-----GDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMVMNFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPMM--PLPKNKEEFEKVIKTA-----------------KLLAFVVREGPMFEAMIMNREINNPMFRFLFENQAPAHVYYRWKLYSILQ---------------------RPLYLN------------DIDISK-DLRAVTGINGN-------------FCFR----------------QRDKLEEILRGLTPRKNDIGEAMMFCLNHAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKYFEAKLCQIFADLNAAYRAIQGHLQSENFKQRVMACFRAWEDWAIYPEPYLIRLQNIFLGLVNIEDKEPEEVPDDLDGAPIEEE--LDVPLIEDVDGIP--IDGAPIDDLDGVPIKSLED-DLDGVPLDINDDAKKNEPIFKVAPSKWEAVDESELESQAVTTSKWELFDQH 688

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:100216247])

HSP 1 Score: 405.216 bits (1040), Expect = 3.433e-126
Identity = 306/784 (39.03%), Postives = 419/784 (53.44%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKE-KFQSEFNKKPP---LLGKPKE-------QSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV-----EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
            I KMS  ++ +T++   ++E +K +  +  A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GKLY+P          +F E K Q   N++PP   +LG+PK+       + K+KSNLE F EELKQ+Q+ER+ R+ K K  T R E         P   +++  R+   D       +   A    +P   D       D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  +  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  M      + E+  + +K                   +++ FV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L                      RP  LN            DID SK  L  ++    N              C                  QR++L EIL  L P K+ IGEAM++CL HA++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y  I   ++SE  K +V++CFRAW DW +YP  +L +L+N FLG+V     EP  + ++     + EE  L V  + D DG P  +DG P+D        S E  D+   P          EP+F   PSKWE VD ++ ES+ V  S+W+L +  
Sbjct:   64 IGKMSAAAK-RTLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGDASKV-KTFVRGGIVNATKEEHEADEKRGKLYKP--------SSRFSEPKSQQSSNERPPPPIILGEPKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERH-KTKGRTSRFE---------PPQTDTDTQRR-LMDTPSSRRSRSSGALDDYAPGSHDV-----GDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMVMNFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPMM--PLPKNKEEFEKVIKTA-----------------KLLAFVVREGPMFEAMIMNREINNPMFRFLFENQAPAHVYYRWKLYSILQ---------------------RPLYLN------------DIDISK-DLRAVTGINGN-------------FCFR----------------QRDKLEEILRGLTPRKNDIGEAMMFCLNHAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKYFEAKLCQIFADLNAAYRAIQGHLQSENFKQRVMACFRAWEDWAIYPEPYLIRLQNIFLGLVNIEDKEPEEVPDDLDGAPIEEE--LDVPLIEDVDGIP--IDGAPIDDLDGVPIKSLED-DLDGVPLDINDDAKKNEPIFKVAPSKWEAVDESELESQAVTTSKWELFDQH 718

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:100216247])

HSP 1 Score: 407.142 bits (1045), Expect = 7.253e-126
Identity = 306/784 (39.03%), Postives = 419/784 (53.44%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKE-KFQSEFNKKPP---LLGKPKE-------QSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV-----EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
            I KMS  ++ +T++   ++E +K +  +  A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GKLY+P          +F E K Q   N++PP   +LG+PK+       + K+KSNLE F EELKQ+Q+ER+ R+ K K  T R E         P   +++  R+   D       +   A    +P   D       D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  +  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  M      + E+  + +K                   +++ FV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L                      RP  LN            DID SK  L  ++    N              C                  QR++L EIL  L P K+ IGEAM++CL HA++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y  I   ++SE  K +V++CFRAW DW +YP  +L +L+N FLG+V     EP  + ++     + EE  L V  + D DG P  +DG P+D        S E  D+   P          EP+F   PSKWE VD ++ ES+ V  S+W+L +  
Sbjct:   64 IGKMSAAAK-RTLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGDASKV-KTFVRGGIVNATKEEHEADEKRGKLYKP--------SSRFSEPKSQQSSNERPPPPIILGEPKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERH-KTKGRTSRFE---------PPQTDTDTQRRL-MDTPSSRRSRSSGALDDYAPGSHDV-----GDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMVMNFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPMM--PLPKNKEEFEKVIKTA-----------------KLLAFVVREGPMFEAMIMNREINNPMFRFLFENQAPAHVYYRWKLYSILQ---------------------RPLYLN------------DIDISK-DLRAVTGINGN-------------FCFR----------------QRDKLEEILRGLTPRKNDIGEAMMFCLNHAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKYFEAKLCQIFADLNAAYRAIQGHLQSENFKQRVMACFRAWEDWAIYPEPYLIRLQNIFLGLVNIEDKEPEEVPDDLDGAPIEEE--LDVPLIEDVDGIP--IDGAPIDDLDGVPIKSLED-DLDGVPLDINDDAKKNEPIFKVAPSKWEAVDESELESQAVTTSKWELFDQH 718

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
Match: U2surp (U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208])

HSP 1 Score: 498.819 bits (1283), Expect = 2.929e-160
Identity = 322/755 (42.65%), Postives = 439/755 (58.15%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S  D+       P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:   69 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS-MDV-------PSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 741

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
Match: U2surp (U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208])

HSP 1 Score: 499.975 bits (1286), Expect = 3.073e-160
Identity = 322/755 (42.65%), Postives = 439/755 (58.15%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S  D+       P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS-MDV-------PSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 785

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
Match: U2surp (U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208])

HSP 1 Score: 499.975 bits (1286), Expect = 3.092e-160
Identity = 321/756 (42.46%), Postives = 439/756 (58.07%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSE--TDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S            +P+    S    D+   S    D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRSM----------DVPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 784

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
Match: U2surp (U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208])

HSP 1 Score: 207.994 bits (528), Expect = 2.699e-58
Identity = 145/304 (47.70%), Postives = 189/304 (62.17%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTH-SSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQ 992
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S  D+       P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS-MDV-------PSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK 392

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
Match: Pabpc6 (poly(A) binding protein, cytoplasmic 6 [Source:MGI Symbol;Acc:MGI:1914793])

HSP 1 Score: 62.003 bits (149), Expect = 3.251e-9
Identity = 27/78 (34.62%), Postives = 50/78 (64.10%), Query Frame = 3

Query:  636 TNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            TN+++ NL  ++ +++L +LFGRFGP  SVK+M     +E  + +  GFV+F    D  +A+E++ G ++ G ++ +G
Sbjct:  191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMT----DESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVG 264

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
Match: sp|O15042|SR140_HUMAN (U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens OX=9606 GN=U2SURP PE=1 SV=2)

HSP 1 Score: 500.745 bits (1288), Expect = 1.350e-159
Identity = 321/755 (42.52%), Postives = 438/755 (58.01%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S        +  P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS--------MDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 785

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
Match: sp|Q6NV83|SR140_MOUSE (U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp PE=1 SV=3)

HSP 1 Score: 499.975 bits (1286), Expect = 2.149e-159
Identity = 322/755 (42.65%), Postives = 439/755 (58.15%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S  D+       P      S   D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRS-MDV-------PSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 785

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
Match: sp|Q5R7X2|SR140_PONAB (U2 snRNP-associated SURP motif-containing protein OS=Pongo abelii OX=9601 GN=U2SURP PE=2 SV=1)

HSP 1 Score: 499.204 bits (1284), Expect = 5.090e-159
Identity = 321/756 (42.46%), Postives = 438/756 (57.94%), Query Frame = 3

Query:  120 TAIVYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLL-----GKP----KEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSE--TDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPL-VDYDGDPL-DVDGVPLDSKATEATNSTEIL----DMFANPSSPQTKRITKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQ 2318
             A +Y++F+  FE  +  KV KT+V+GG VN     H + E  GK+Y+P  +  D+     K       N++PP L      KP     E+ K+KSNLE F EELKQ+Q+ER+ R++ +  ++        +F  EP   +S+  R+S             P+    S    D+   S    D +TTNL+LGN+NP++ E+ LC+ FGRFGPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+   N ++  +      + ED  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP F+FLF+ Q+P HVYYRWKLYS L G+S   W+T++F M+K G +WRPPPLNP+  G+ EE                              Q  E  +E P       K  L + QR++L EIL  L P K+ IG+AMV+CL +A++AE+++D I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  Y TI   ++SE  K +V++CFRAW DW +YP  FL KL+N FLG+V     +  +        + L   P+  + DG PL DVDG+P+D+   +  +   I     D+   P          EP+F   PSKWE VD ++ E++ V  S+W+L +  
Sbjct:  113 AAEIYEEFLAAFEGSDGNKV-KTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQ-----KNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLS--------RF--EPPQSDSDGQRRSM----------DAPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLK---NPNAPML--PPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEE------------------------------QETEAFVEEPSK-----KGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESL----------SILKT---PLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLV-----NIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQH 784

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
Match: sp|Q9C5J3|RRC1_ARATH (Protein RRC1 OS=Arabidopsis thaliana OX=3702 GN=RRC1 PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 3.626e-95
Identity = 220/647 (34.00%), Postives = 327/647 (50.54%), Query Frame = 3

Query:   84 EEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPG------SSTHSSEGAGKLYQPLMKTVDK-IPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFL 2003
            EEEARK +A +ETA +YQ+F+E+F+      KT+V+GGT+NPG      S    S+  G + +   + V   +P     K +    K+     + +E+ K + N++ F EELK+ Q+ RE RNQ          D + +    P  +  E P    FD          P+  P S FD       + D  TTNL++GNL+P++ E  L   FGRFGP+ASVKIMWPR+DEEK R RNCGFV+FMNR+DG+ A ++++G  +  YE+K+GWGK V +P   +  PP     I+      L F+ Q       TG      +       + +L  T     + V  P D  L  +I+ +  +V+     FE  IM +   NP FKF+F+  S EH YY W+LYS   G++ + W+T+ +IM  G   W PPPL P T                     +Q      +S  +A ++    +E          R LTD QR+   ++L  L   +  I EAM + L++AD+A +V++++   +        + SI           VA L LVSDILHNS A+V+NAS YR   E +LP +M   N  Y +IT +I +E LK +VL   + W DW+++   ++  L++ FL
Sbjct:   19 EEEARKKKAEDETARLYQEFVESFQGDNATTKTFVRGGTINPGDKPKVDSEGEKSKDGGSVSKKGSRYVPSFLPPPLASKGKEPEKKREEERPREREKGKTR-NIDNFMEELKREQEMRERRNQ----------DRDRQGDSSPSSRFDELP--DDFD----------PSGRPGS-FD-------DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTDEEKRRQRNCGFVSFMNRADGQAAKDEMQGIIVYEYELKIGWGKAVSLPSQALPAPPPGHMAIRSKEGCNLVFSGQ-------TGP----PIITSVPNQNSELVLTPNVPDITVVTPEDEHLRHVIDTLALYVLDGECAFEQAIMERGRGNPLFKFMFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPYIMITGSGRWIPPPL-PVTR--------------------TQEHEKESASTYAAGRTRRAEVE----------RTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEVVEVLTESL-----TLKETSIPTK--------VARLMLVSDILHNSSARVKNASAYRTKFEATLPDIMESFNDLYRSITGRITAEALKERVLKVLQVWADWFLFSDAYIYGLRSTFL 579

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
Match: sp|F4KIA8|RRC1L_ARATH (Protein RRC1-like OS=Arabidopsis thaliana OX=3702 GN=At5g10800 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.235e-74
Identity = 191/557 (34.29%), Postives = 274/557 (49.19%), Query Frame = 3

Query:  342 KPKEQSKRKS-NLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDS--ETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFL 2003
            + KE  K K+ N++ F EELK+ Q+ RE RNQ +    E   D            NS+    SRFD             LP   FD      S  + D  TTNL++ NL+ ++ E  L   FGRFGP+ASVKIMWPR++EEK R R+CGFVAFMNR+DGE A EK++G  +  YE+K+GWGK V +P   +  PP     I+      L F+      +    N +S            +L  T     + V  P D  L Q+I+ M   V+  G  FE  IM +   NP F FLF+  S EH YY W+LYS   G++ + W+T+ +IM  G   W PPPL P T   PE                     +   S+ +       C E         ++ LTDSQR+   ++L  L   +  I EAM + L++A++A +V++++   +        + SI           VA L LVSDI+HNS A+V+NAS YR   E +LP +M   N  Y ++  +I +E L+ +VL   + W DW+++   ++  L+  FL
Sbjct:  114 RSKEMEKGKTRNIDHFVEELKREQEIRERRNQDR----ENSRD-----------HNSDNTSSSRFD------------ELPDY-FDPSGRLGSLDDGDPQTTNLYVVNLSSKVDENFLLRTFGRFGPIASVKIMWPRTEEEKRRERHCGFVAFMNRADGEAAKEKMQGIIVYEYELKIGWGKVVFLPSQALPAPPPGHMAIRSKEGCNLIFSVTSGPPMNSVPNQNS------------ELVLTPNVPDITVISPEDEHLKQIIDTMALNVLDGGCAFEQAIMERGRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPYIMIAGSGRWIPPPL-PATRS-PE---------------------HGKESRGTYAAGKSRCTE--------AEQTLTDSQRDEFEDMLRALTLERSQIREAMGFALDNAEAAGEVVEVLTESL-----TLKETSIPTK--------VARLMLVSDIIHNSSARVKNASAYRTKFEATLPDIMESFNDLYHSVHGRITAEALRERVLKVLQVWADWFLFSDAYINGLRATFL 586

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
Match: A0A4S2M2L5 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_003175 PE=4 SV=1)

HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 388/906 (42.83%), Postives = 531/906 (58.61%), Query Frame = 3

Query:   63 KTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSSEGAG--KLYQPLMKTVDKI--PDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRN---QKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSS----------PFDI-----------DFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQK------------TGNVD---------SRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIV------TQIDKTIGYATDKSI-----ENSNAA---GLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE-----------PPALXXXXXXXXXXXX--------XLLSVKPLVDYDGDPLDVDGVPLDSKATE-----------ATNSTEILDMFANPSSPQTKRITKEPLFVPSKWETVDPADEESEIV--QSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKKNDEN------RNITSLVSY 2477
            K +   +E+  +K +  E+T  V+Q F+ TFE   K  +TWVKGG VNPGS   SS  +   ++Y+P+ K  +K    D  K + +    +KPP LGK + + ++KS LE F EELK +QQ+RE R+   Q + +       I++      E+  S+   +SR   N      PL  T  SS          P +I           D+PYD + DRTTTNLFLGNLNP++TEQQLCE FGR+GPLASVKIMWPR+DEE++RGRNCGFVAFMNR DGERAL+ +RG E+ G+EMKLGWGK+V IP +PIY+PP L+E+IKPPPPSGLPFNAQPR+WL+             T  VD          RK FD+  MS+++L E LK+ +VKV IP+DR +L LI+RM+EFV+ EG +FEA IM++E  NP FKFLFD+QS EH YYRWKL+S LHGES  +W+TDEF M++ GP WRPPP+N F+ G+PE+L+E+ D+               D+  + A   +  C              LT++QR R  ++L+DLEP + ++G+ MVWCLEHAD+A D+ D +V      + +D++   ++ K++     + S A     +++ VA LFL+SDILHNS AKV NAS++RK  E  LP V ++L+  Y ++  K+K+EQLK KV+ CF AW DW +YP D+L +L+N FLG+V            P  L         S+          +L  +PLV YDGDPLDVDG PLD    E             N  +++   A+ SS +        LFVPSKWETVDPA  ES+ V   SRW+L+   +  + +  N    G   S  + +  L   +  DLS +N  ND+         I +LV+Y
Sbjct:   19 KNILKKLEDHHKKKEEEEQTQKVFQDFVATFEGDSK-QRTWVKGGVVNPGSDGGSSGSSSESRIYKPVSKISEKQSNADSAKPESKPSLPEKPPSLGKRRGKEQKKSKLEQFKEELKLIQQQREQRHALRQGKNVSPSAASTIHS------ELDLSDVGSRSREYRN-----PPLGFTQQSSGVGLLGDSGSPSNIYGRRSQRDRRDDYPYDFDGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDGERALDNIRGKELMGFEMKLGWGKSVPIPLYPIYIPPALLELIKPPPPSGLPFNAQPRDWLKSLRSAIKERAKLVTDGVDPEATRPPAADRKPFDVNKMSEDELGEVLKDAIVKVVIPSDRSILALIHRMIEFVVLEGPQFEAAIMHREQNNPQFKFLFDYQSSEHTYYRWKLWSVLHGESVNNWRTDEFRMFENGPLWRPPPMNLFSGGMPEDLVEEDDYPYAPGYVPPLQARRHDAELDEAMALSRQC-------------GLTEAQRGRFTQMLVDLEPSRANVGDVMVWCLEHADAASDITDCVVDALSFTSSLDQSEAVSSPKNVVSEMPDESKAKPSLSVSKAVARLFLISDILHNSSAKVPNASYFRKCFERRLPDVFLNLHALYESVDGKLKAEQLKQKVMLCFHAWDDWAIYPNDYLIRLQNIFLGLVSEIDDESDLAGVPLELEGAAVIDVSSKSLPTLDPDVEMLQGQPLVQYDGDPLDVDGSPLDDTDQEDKPIAKKPKESVINEPKVVSPDADSSSTR--------LFVPSKWETVDPATVESQAVTTTSRWELLTDGAPTQLTEPNNHVRGVRESGMERSVKLG--RWDDLS-QNSTNDDELDGQPLTGIGALVAY 888

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
Match: A0A4V3SG04 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_003175 PE=4 SV=1)

HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0
Identity = 388/906 (42.83%), Postives = 531/906 (58.61%), Query Frame = 3

Query:   63 KTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSSEGAG--KLYQPLMKTVDKI--PDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRN---QKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSS----------PFDI-----------DFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQK------------TGNVD---------SRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIV------TQIDKTIGYATDKSI-----ENSNAA---GLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE-----------PPALXXXXXXXXXXXX--------XLLSVKPLVDYDGDPLDVDGVPLDSKATE-----------ATNSTEILDMFANPSSPQTKRITKEPLFVPSKWETVDPADEESEIV--QSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKKNDEN------RNITSLVSY 2477
            K +   +E+  +K +  E+T  V+Q F+ TFE   K  +TWVKGG VNPGS   SS  +   ++Y+P+ K  +K    D  K + +    +KPP LGK + + ++KS LE F EELK +QQ+RE R+   Q + +       I++      E+  S+   +SR   N      PL  T  SS          P +I           D+PYD + DRTTTNLFLGNLNP++TEQQLCE FGR+GPLASVKIMWPR+DEE++RGRNCGFVAFMNR DGERAL+ +RG E+ G+EMKLGWGK+V IP +PIY+PP L+E+IKPPPPSGLPFNAQPR+WL+             T  VD          RK FD+  MS+++L E LK+ +VKV IP+DR +L LI+RM+EFV+ EG +FEA IM++E  NP FKFLFD+QS EH YYRWKL+S LHGES  +W+TDEF M++ GP WRPPP+N F+ G+PE+L+E+ D+               D+  + A   +  C              LT++QR R  ++L+DLEP + ++G+ MVWCLEHAD+A D+ D +V      + +D++   ++ K++     + S A     +++ VA LFL+SDILHNS AKV NAS++RK  E  LP V ++L+  Y ++  K+K+EQLK KV+ CF AW DW +YP D+L +L+N FLG+V            P  L         S+          +L  +PLV YDGDPLDVDG PLD    E             N  +++   A+ SS +        LFVPSKWETVDPA  ES+ V   SRW+L+   +  + +  N    G   S  + +  L   +  DLS +N  ND+         I +LV+Y
Sbjct:   19 KNILKKLEDHHKKKEEEEQTQKVFQDFVATFEGDSK-QRTWVKGGVVNPGSDGGSSGSSSESRIYKPVSKISEKQSNADSAKPESKPSLPEKPPSLGKRRGKEQKKSKLEQFKEELKLIQQQREQRHALRQGKNVSPSAASTIHS------ELDLSDVGSRSREYRN-----PPLGFTQQSSGVGLLGDSGSPSNIYGRRSQRDRRDDYPYDFDGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDGERALDNIRGKELMGFEMKLGWGKSVPIPLYPIYIPPALLELIKPPPPSGLPFNAQPRDWLKSLRSAIKERAKLVTDGVDPEATRPPAADRKPFDVNKMSEDELGEVLKDAIVKVVIPSDRSILALIHRMIEFVVLEGPQFEAAIMHREQNNPQFKFLFDYQSSEHTYYRWKLWSVLHGESVNNWRTDEFRMFENGPLWRPPPMNLFSGGMPEDLVEEDDYPYAPGYVPPLQARRHDAELDEAMALSRQC-------------GLTEAQRGRFTQMLVDLEPSRANVGDVMVWCLEHADAASDITDCVVDALSFTSSLDQSEAVSSPKNVVSEMPDESKAKPSLSVSKAVARLFLISDILHNSSAKVPNASYFRKCFERRLPDVFLNLHALYESVDGKLKAEQLKQKVMLCFHAWDDWAIYPNDYLIRLQNIFLGLVSEIDDESDLAGVPLELEGAAVIDVSSKSLPTLDPDVEMLQGQPLVQYDGDPLDVDGSPLDDTDQEDKPIAKKPKESVINEPKVVSPDADSSSTR--------LFVPSKWETVDPATVESQAVTTTSRWELLTDGAPTQLTEPNNHVRGVRESGMERSVKLG--RWDDLS-QNSTNDDELDGQPLTGIGALVAY 888

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
Match: A0A4Z2DBL8 (U2 snRNP-associated SURP motif-containing protein OS=Schistosoma japonicum OX=6182 GN=EWB00_002578 PE=4 SV=1)

HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0
Identity = 362/817 (44.31%), Postives = 506/817 (61.93%), Query Frame = 3

Query:   96 RKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGS-STHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNK---KPPLLGKPKEQSKRKSNLEAFSEELKQLQQERE----MRNQKQKLVTERVEDINNKFVKEPEIK-----NSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQK--------------TGNVDS-------RKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDK-----------------------SIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE------------PPALXXXXXXXXXXXX--------XLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILD--MFANPSSPQTK--RITKEPLFVPSKWETVDPADEESEIVQSRWQ 2303
            +K +  E T  V+++F+ TFEEP K ++ WVKGG VNP S S   S+G+G+LY+P+ K   K+ +K +++ +++  K   KPP LGK K Q ++KS LE F EELK +QQ+RE    +R  + +  T+   D+++  ++  E +     N      + F   +            +   D+D+PYD + DRTTTNLFLGNLNP++TEQQLCE FGR+GPLASVKIMWPR++EE++RGRNCGFVAFMNR DGERAL+ +RG E+ G+EMKLGWGK+V IP +P+Y+PP L+E++KPPPPSGLPFNAQPREWL+                G+ D+       RK +D+  MS E+L E L++ VVKV +P+DR +L LI+RM+EFV+ EG +FEA IM++E+ NP FKFLFD+QS +HVYYRWKL+S LHGES   W+T+EF M++GGP WRPPP+N F+ G+PE+L+E+ D+              +   +ES +   E+ +E   ++       LT++QR R  ++L DLEP +  IGE MVWCLEHADSA D+   IV  +     + +++                         E S +  +N++VA LFL SDIL+NS AKV NASF+RK  E  LP +  +LN +Y  +  K+K+EQLK KV+ CFRAW DW VYP +FL KL+N FLG+V             P  + E++ N  ++++         +L  +PLV YDGD LDVDG PLD++   + +     D     NP   + K    T   LFVPSKWET++  + E+  V S W+
Sbjct:   30 KKKKDEEHTQQVFEEFVATFEEPSK-SRAWVKGGVVNPSSGSVEDSKGSGRLYRPVSKLDSKL-NKTEDQNKTDLKKSTEKPPALGKRKGQEQKKSKLEQFKEELKLIQQQREQRHALRQGRNQPSTQSELDLSDVGMRNREYRRGFSNNQGGDSGAGFHNTVSTPPSFYSKRSQNDRHDVDYPYDYDGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMNRKDGERALDNIRGKELMGFEMKLGWGKSVPIPLYPVYIPPALLELVKPPPPSGLPFNAQPREWLKSFRLAIKERAKLVTDGGDSDNALPPAPDRKPYDINKMSSEELTEVLRDAVVKVVMPSDRSILALIHRMIEFVVLEGPQFEAAIMHREVNNPMFKFLFDYQSSDHVYYRWKLWSVLHGESVTKWRTEEFRMFEGGPLWRPPPVNLFSGGMPEDLVEEDDYPYAP----GYVPPPSGRRRESEDLQEEIRLEAAAASRRC---GLTEAQRGRFTQMLEDLEPCRIKIGEVMVWCLEHADSASDIALCIVDSVAPNSSFTSNQLEKETNSVDENLAADFKSDQDTTDHEKSQSISINKLVARLFLASDILYNSSAKVPNASFFRKCFETCLPDMFKNLNSHYKNVEGKLKAEQLKQKVMLCFRAWEDWAVYPNEFLIKLQNIFLGLVSDVVDYETDLSGVPLNMDEDEQNQDLTKKIGFLNPDVEVLESQPLVQYDGDLLDVDGSPLDNEDDRSPSPIRSKDSQFNVNPVEDEVKPSGDTSNRLFVPSKWETIETTEPETVSVSSIWE 837

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
Match: A0A3Q0KRB0 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1)

HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0
Identity = 369/837 (44.09%), Postives = 513/837 (61.29%), Query Frame = 3

Query:   96 RKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGS-STHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNK---KPPLLGKPKEQSKRKSNLEAFSEELKQLQQERE----MRNQKQKLVTERVEDINNKFVKEPEIK-NSEEPRKSRFDLNIIPIIKPLPATLPSSP----FDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQK------------TGNVDS----------RKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIV-----------TQIDKTIGYATDKSI------------ENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE------------PPALXXXXXXXXXXXX--------XLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILD-MFANPSSPQTKRI---TKEPLFVPSKWETVDPADEESEIVQSRWQL-----MESQSEDKKSSDN 2345
            +K +  E T  V+++F+ TFEEP K ++ WVKGG VNP S S+  ++G G++Y+P+ K   K+ +K + + +++  K   KPP LGK K Q ++KS LE F EELK +QQ+RE    +R  + +  T+   D+++  ++  E +  S   +     +     +   P+           D+D+PYD + DRTTTNLFLGNLNP++TEQQLCE FGR+GPLASVKIMWPR++EE++RGRNCGFVAFMNR DGERAL+ +RG E+ G+EMKLGWGK+V IP +P+Y+PP L+E++KPPPPSGLPFNAQPREWL+             T   D           RK +D+  MS E+L E L+  VVKV +P+DR +L LI+RM+EFV+ EG +FEA +M++E  NP FKFLFD+QS +HVYYRWKL+S LHGES   W+T+EF M++GGP WRPPP+N F+ G+PE+L+E+ D+              +   +ES +   E+ +E   ++       LT++QR R  ++L DLEP +  IGE MVWCLEHADSA D+   IV             ++K I    +  I            E S +  +N++VA LFL SDIL+NS AKV NASF+RK  E  LP +  +LN +Y  +  K+K+EQLK KV+ CFRAW DW VYP +FL KL+N FLG+V             P  L E++ N  ++++         +L  +PLV YDGDPLDVDG PLD++   + +     +  F+ P++    +    T   LFVPSKWETV+  + E+  V S W+      M+      KSSDN
Sbjct:   30 KKKKEEEHTQQVFEEFVATFEEPSK-SRAWVKGGVVNPSSGSSEDTKGTGRIYRPVSKLDSKL-NKTEGQNKADLKKSTEKPPALGKRKGQEQKKSKLEQFKEELKLIQQQREQRHALRQGRNQPSTQSELDLSDVGMRNREYRRGSSNNQGGDSGMGFHNTVSTPPSFYSKRSQNDRHDVDYPYDYDGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMNRKDGERALDNIRGKELMGFEMKLGWGKSVPIPLYPVYIPPALLELVKPPPPSGLPFNAQPREWLKSFRLAIKERAKLVTDGADGESAPPPPAPDRKPYDINKMSSEELTEVLREAVVKVVMPSDRSILALIHRMIEFVVLEGPQFEAAVMHREANNPMFKFLFDYQSSDHVYYRWKLWSVLHGESVTKWRTEEFRMFEGGPLWRPPPVNLFSGGMPEDLVEEDDYPYAP----GYVPPPSGRRRESEDLQEEIRLEAAAASRRC---GLTEAQRGRFTQMLEDLEPCRIKIGEVMVWCLEHADSASDIALCIVDSVAPNSNFTSNHLEKEINSVDENPISDFKSDQGSTEHEKSQSISINKLVARLFLASDILYNSSAKVPNASFFRKCFETCLPDMFKNLNSHYKNVEGKLKAEQLKQKVMLCFRAWEDWAVYPNEFLIKLQNIFLGLVSEAVDYEADLSGVPLNLDEDEQNQDLAKKVGFLNPDVEVLESQPLVQYDGDPLDVDGSPLDNEDDRSPSPVRPKNSQFSAPATEDEVKPSGDTSNRLFVPSKWETVETTEPETLTVASIWESASTLDMKKDQPISKSSDN 857

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
Match: A0A183QJ42 (Uncharacterized protein OS=Schistosoma rodhaini OX=6188 PE=4 SV=1)

HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0
Identity = 370/840 (44.05%), Postives = 514/840 (61.19%), Query Frame = 3

Query:   96 RKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGS----STHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNK---KPPLLGKPKEQSKRKSNLEAFSEELKQLQQERE----MRNQKQKLVTERVEDINNKFVKEPEIK-NSEEPRKSRFDLNIIPIIKPLPATLPSSP----FDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQK------------TGNVDS----------RKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIV-----------TQIDKTIGYATDKSI------------ENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE------------PPALXXXXXXXXXXXX--------XLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILD-MFANPSSPQTKRI---TKEPLFVPSKWETVDPADEESEIVQSRWQL-----MESQSEDKKSSDN 2345
            +K +  E T  V+++F+ TFEEP K ++ WVKGG VNP S    S+  ++G G++Y+P+ K   K+ +K +++ +++  K   KPP LGK K Q ++KS LE F EELK +QQ+RE    +R  + +  T+   D+++  ++  E +  S   +     +     +   P+           D+D+PYD + DRTTTNLFLGNLNP++TEQQLCE FGR+GPLASVKIMWPR++EE++RGRNCGFVAFMNR DGERAL+ +RG E+ G+EMKLGWGK+V IP +P+Y+PP L+E++KPPPPSGLPFNAQPREWL+             T   D           RK +D+  MS E+L E L+  VVKV +P+DR +L LI+RM+EFVI EG +FEA +M++E  NP FKFLFD+QS +HVYYRWKL+S LHGES   W+T+EF M++GGP WRPPP+N F+ G+PE+L+E+ D+              +   +ES +   E+ +E   ++       LT++QR R  ++L DLEP +  IGE MVWCLEHADSA D+   IV             ++K I    +  I            E S +  +N++VA LFL SDIL+NS AKV NASF+RK  E  LP +  +LN +Y  +  K+K+EQLK KV+ CFRAW DW VYP +FL KL+N FLG+V             P  L E++ N  ++++         +L  +PLV YDGDPLDVDG PLD++   + +     +  F+ P++    +    T   LFVPSKWETV+  + E+  V S W+      M+      KSSDN
Sbjct:   30 KKKKEEEHTQQVFEEFVATFEEPSK-SRAWVKGGVVNPSSAAIGSSEDTKGTGRIYRPVSKLDSKL-NKTEDQNKADLKKSTEKPPALGKRKGQEQKKSKLEQFKEELKLIQQQREQRHALRQGRNQPSTQSELDLSDVGMRNREYRRGSSNNQGGDSGMGFHNTVSTPPSFYSKRSQNDRHDVDYPYDYDGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMNRKDGERALDNIRGKELMGFEMKLGWGKSVPIPLYPVYIPPALLELVKPPPPSGLPFNAQPREWLKSFRLAIKERAKLVTDGADGESAPPPPAPDRKPYDINKMSSEELTEVLREAVVKVVMPSDRSILALIHRMIEFVILEGPQFEAAVMHREANNPMFKFLFDYQSSDHVYYRWKLWSVLHGESVTKWRTEEFRMFEGGPLWRPPPVNLFSGGMPEDLVEEDDYPYAP----GYVPPPSGRRRESEDLQEEIRLEAAAASRRC---GLTEAQRGRFTQMLEDLEPCRIKIGEVMVWCLEHADSASDIALCIVDSVAPNSNFTSNHLEKEINSVDENPISELKSDQGSTEHEKSQSISINKLVARLFLASDILYNSSAKVPNASFFRKCFETCLPDMFKNLNWHYKNVEGKLKAEQLKQKVMLCFRAWEDWAVYPNEFLIKLQNIFLGLVSEAVDYEADLSGIPLNLDEDEQNQDLAKKLGFLNPDVEVLESQPLVQYDGDPLDVDGSPLDNEDDRSPSPVRPKNSQFSAPATEDEVKPSGDTSNRLFVPSKWETVETTEPETLTVASIWESASTLDMKKDQPINKSSDN 860

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 466.077 bits (1198), Expect = 1.579e-148
Identity = 312/784 (39.80%), Postives = 426/784 (54.34%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSS-THSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRK-------SNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV----EPPALXXXXXXXXXXXXXLLSVKPLV--DYDGDPL-DVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPL--------FVPSKWETVDPADEESEIV-QSRWQLME 2312
            I KM+   R  T++   ++E +K +  +  A +Y++F+  FE      KT+V+GG  N         E  GKLY+P  + ++        K        P  L   K  + +K       SNLE F EELKQ+Q+ER+ R++ +  V+ R E ++           + E R+S  D               S+P   D       D +TTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFM R D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQP+E L+ T              S E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++FLF+ QSP HVYYRWKLYS L G+S   WKT++F ++K G  WRPPPLNP+  G PE             E   +     + SK                     K  L D +R++L E L  L P +  I EAM++CL HAD+AE++++ I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  + TI   ++SE  K +V+SCFRAW DW VYP  FL KL+N FLG+V    E     E     +      +   P+V  + DG PL DVDG+P+D    +      + D+   P       +   P           PSKWE VD +  E++ V  S+W++++
Sbjct:   27 IGKMAVAKR--TLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGEGRVKTFVRGGIANATKEEVAVDEKKGKLYKPKSRVLEA-------KSFLPLETPPQFLAIDKRNASKKGEKEKKKSNLELFKEELKQIQEERDERHRLKGRVS-RFEPLS-----------AMEGRRSFLD--------------DSAPGSHDV-----GDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPKERLKNTNAP-----MPPPPKSKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREISNPLYRFLFENQSPAHVYYRWKLYSILQGDSPTKWKTEDFRLFKNGSLWRPPPLNPYLHGTPE-----------EEEGEEEEEEEEEGSK---------------------KGSLKDEERDKLEETLRGLTPRRGDIAEAMLFCLTHADAAEEIVECITESL----------SILKTP---LPKKIARLYLVSDVLYNSSAKVSNASYYRKFFETKLCQIFSDLNATFRTIQGHLQSEHFKQRVMSCFRAWEDWAVYPDPFLIKLQNIFLGLVSLDPEKETPVEVPMPEEPPPTEDIDGAPIVEEELDGAPLEDVDGMPIDGAPLDG---APLDDLDGVPIKGAEDELDGVPFDGPKPTFKMAPSKWEEVDGSALEAQAVTTSKWEVVD 717

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 465.692 bits (1197), Expect = 2.472e-148
Identity = 313/785 (39.87%), Postives = 428/785 (54.52%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSS-THSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRK-------SNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV----EPPALXXXXXXXXXXXXXLLSVKPLV--DYDGDPL-DVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPL--------FVPSKWETVDPADEESEIV-QSRWQLME 2312
            I KM+   R  T++   ++E +K +  +  A +Y++F+  FE      KT+V+GG  N         E  GKLY+P  + ++        K        P  L   K  + +K       SNLE F EELKQ+Q+ER+ R++ +  V+ R E ++     E    +    R++R                PSS  D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFM R D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQP+E L+ T              S E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++FLF+ QSP HVYYRWKLYS L G+S   WKT++F ++K G  WRPPPLNP+  G PE             E   +     + SK                     K  L D +R++L E L  L P +  I EAM++CL HAD+AE++++ I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRK+ E  L Q+   LN  + TI   ++SE  K +V+SCFRAW DW VYP  FL KL+N FLG+V    E     E     +      +   P+V  + DG PL DVDG+P+D    +      + D+   P       +   P           PSKWE VD +  E++ V  S+W++++
Sbjct:   27 IGKMAVAKR--TLSKKEQDELKKKEDEKAAAEIYEEFLAAFEGGEGRVKTFVRGGIANATKEEVAVDEKKGKLYKPKSRVLEA-------KSFLPLETPPQFLAIDKRNASKKGEKEKKKSNLELFKEELKQIQEERDERHRLKGRVS-RFEPLS---AMEGRRSSDGSSRRNR----------------PSSVLDDSAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPKERLKNTNAP-----MPPPPKSKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREISNPLYRFLFENQSPAHVYYRWKLYSILQGDSPTKWKTEDFRLFKNGSLWRPPPLNPYLHGTPE-----------EEEGEEEEEEEEEGSK---------------------KGSLKDEERDKLEETLRGLTPRRGDIAEAMLFCLTHADAAEEIVECITESL----------SILKTP---LPKKIARLYLVSDVLYNSSAKVSNASYYRKFFETKLCQIFSDLNATFRTIQGHLQSEHFKQRVMSCFRAWEDWAVYPDPFLIKLQNIFLGLVSLDPEKETPVEVPMPEEPPPTEDIDGAPIVEEELDGAPLEDVDGMPIDGAPLDG---APLDDLDGVPIKGAEDELDGVPFDGPKPTFKMAPSKWEEVDGSALEAQAVTTSKWEVVD 729

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
Match: zgc:163098 (zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141])

HSP 1 Score: 408.297 bits (1048), Expect = 6.468e-128
Identity = 273/756 (36.11%), Postives = 379/756 (50.13%), Query Frame = 3

Query:  120 TAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSSE-GAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSK----------RKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEP------------PALXXXXXXXXXXXXXLLSVKPLVDYDG-----DPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPL------FVP----SKWETVDPAD 2270
             A V+++F+ +F+   K   KT+V+GG VN      ++E    KLY+P  K            F        P+  +P E  K          +KSNLE F EELKQ+Q+ERE R +++K         N+     P+I  S   R+S FD                         D  T  TTTNL++G +NP++TE+ LC+ FG++GPLASVKIMWPR++EE+ R  N GFVAFM R D ERAL  L G  + G+EMKLGWGK V IPP P+Y P  +++   PPPPSGLPFNAQPR+  +        +       S ED  +TL + VV V IP++R  L      +  +++   E  +          + +FLFD +S EHVYYRWKLYS L G+ST  WKT  F M++GG  WRPP LNP+  G                       +     + S     E+            K QL    RE+L  +L  L P +  IG+AM++CLE A++AE+V+  I   +          SI ++    L + VA L+LVSDIL+NSCAKV NAS+YRKY E+ LPQ+   + + Y  I +++++EQ K ++++CFRAW DW +YP  FL +L+N FLG+++P            P L     +    +   +   PL D DG     DP  +DGVP+D             D+   P  P    +   P        VP    SKWE VD A+
Sbjct:   31 AAEVFEEFLASFDSNEKSGVKTFVRGGIVNATKDEEAAEVKKNKLYRPAAK------------FTPVLQNASPV--QPTEHKKSVVKKKTEEKKKSNLELFKEELKQIQEEREERYKRKK---------NDPGGVYPDIDPSLT-RRSIFD-------------------------DDPTVPTTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRGR-------SQEDFYKTLYDAVVTVVIPSERYTL-----FIHLILQYDSETHS----------HSRFLFDNKSQEHVYYRWKLYSILQGDSTSEWKTSHFRMFRGGSLWRPPVLNPYLHG-----------------------DEEPEEESSPTHEEEL-----------RKGQLKTEHREQLEALLRSLTPRRVEIGDAMLFCLEKAEAAEEVVSCISESL----------SILHTP---LQKKVARLYLVSDILYNSCAKVSNASYYRKYFESRLPQIFSDVGEAYRNIQARLQAEQFKQRIMTCFRAWEDWAIYPESFLIQLQNIFLGLIKPGEEVIEQPEPPSPDLDGAPLDGTPLDGVEIDGTPLDDLDGSPMPWDPQSIDGVPVD-------------DLDGVPLGPPMDDLDGVPFEESLDKTVPSVALSKWERVDDAE 655

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
Match: zgc:163098 (zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141])

HSP 1 Score: 209.92 bits (533), Expect = 1.207e-59
Identity = 137/345 (39.71%), Postives = 185/345 (53.62%), Query Frame = 3

Query:  114 EETAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSSE-GAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSK----------RKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQL 1112
            E+ A V+++F+ +F+   K   KT+V+GG VN      ++E    KLY+P  K            F        P+  +P E  K          +KSNLE F EELKQ+Q+ERE R +++K         N+     P+I  S   R+S FD                         D  T  TTTNL++G +NP++TE+ LC+ FG++GPLASVKIMWPR++EE+ R  N GFVAFM R D ERAL  L G  + G+EMKLGWGK V IPP P+Y P  +++   PPPPSGLPFNAQPR+  +        +       S ED  +TL + VV V IP++R L
Sbjct:   52 EKAAEVFEEFLASFDSNEKSGVKTFVRGGIVNATKDEEAAEVKKNKLYRPAAK------------FTPVLQNASPV--QPTEHKKSVVKKKTEEKKKSNLELFKEELKQIQEEREERYKRKK---------NDPGGVYPDIDPSLT-RRSIFD-------------------------DDPTVPTTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRGR-------SQEDFYKTLYDAVVTVVIPSERNL 340

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
Match: zgc:163098 (zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141])

HSP 1 Score: 208.764 bits (530), Expect = 2.232e-59
Identity = 136/343 (39.65%), Postives = 183/343 (53.35%), Query Frame = 3

Query:  120 TAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSSE-GAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSK----------RKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQL 1112
             A V+++F+ +F+   K   KT+V+GG VN      ++E    KLY+P  K            F        P+  +P E  K          +KSNLE F EELKQ+Q+ERE R +++K         N+     P+I  S   R+S FD                         D  T  TTTNL++G +NP++TE+ LC+ FG++GPLASVKIMWPR++EE+ R  N GFVAFM R D ERAL  L G  + G+EMKLGWGK V IPP P+Y P  +++   PPPPSGLPFNAQPR+  +        +       S ED  +TL + VV V IP++R L
Sbjct:   31 AAEVFEEFLASFDSNEKSGVKTFVRGGIVNATKDEEAAEVKKNKLYRPAAK------------FTPVLQNASPV--QPTEHKKSVVKKKTEEKKKSNLELFKEELKQIQEEREERYKRKK---------NDPGGVYPDIDPSLT-RRSIFD-------------------------DDPTVPTTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRGR-------SQEDFYKTLYDAVVTVVIPSERNL 317

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663])

HSP 1 Score: 52.7582 bits (125), Expect = 3.315e-7
Identity = 26/78 (33.33%), Postives = 44/78 (56.41%), Query Frame = 3

Query:  636 TNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            TN+++ N   ++ E +L E FG+FG   SV +M     +E  + R  GFV+F    D +RA+ ++ G E+ G  + +G
Sbjct:  194 TNVYIKNFGDDMDEDKLREFFGKFGKALSVCVM----SDECGKSRGFGFVSFEQHEDAQRAVNEMNGKELNGRTVFVG 267

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167])

HSP 1 Score: 49.6766 bits (117), Expect = 1.322e-6
Identity = 23/88 (26.14%), Postives = 47/88 (53.41%), Query Frame = 3

Query:  639 NLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHP 902
            ++F+G+L+PE++   L   F  FG ++  +++    D    + +  GFV+F  + D E A++++ G  + G +++  W      PP P
Sbjct:    4 HVFVGDLSPEISTDDLRAAFAPFGKISDARVV---KDLATGKSKGYGFVSFFQKLDAENAIQQMGGQWLGGRQIRTNW--ATRKPPAP 86

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
Match: RBM39 (RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923])

HSP 1 Score: 50.8322 bits (120), Expect = 1.420e-6
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 3

Query:  642 LFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            L++G+L+  +TE  L  +F  FG + + ++M    D +  R R  GFV F +     +ALE+L G E+ G  MK+G
Sbjct:  261 LYVGSLHFNITEDMLKGIFEPFGKIENCQLMM---DSDTGRSRGYGFVTFADAECARKALEQLNGFELAGRPMKVG 333

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:406495])

HSP 1 Score: 49.6766 bits (117), Expect = 2.110e-6
Identity = 32/95 (33.68%), Postives = 47/95 (49.47%), Query Frame = 3

Query:  612 DSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEIC-GYEMKLGWGKTVLIP 893
            D  +DRT T L++G L+  + E QL   F +FG L SV ++ PR        + C FV F  R   E+A +K     I  G  + + WG++   P
Sbjct:  134 DLPSDRTITTLYVGGLDDSIGETQLRNHFYQFGELRSVTVV-PR--------QQCAFVQFTTRHSAEQAADKSFNKLIINGRRLNIKWGRSQGAP 219

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
Match: RBM39 (RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923])

HSP 1 Score: 49.6766 bits (117), Expect = 3.020e-6
Identity = 25/77 (32.47%), Postives = 45/77 (58.44%), Query Frame = 3

Query:  642 LFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGW 872
            L++G+L+  +TE  L  +F  FG + ++++M    D E  R +  GF+ F +    ++ALE+L G E+ G  MK+ +
Sbjct:  274 LYVGSLHFNITEAMLMGIFEPFGKIDNIQLMM---DPETGRSKGFGFITFSSADCAKKALEQLNGFELAGRPMKVNY 347

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Yeast
Match: NGR1 (RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; interacts with Dhh1p to mediate POR1 mRNA decay; expressed in stationary phase [Source:SGD;Acc:S000000416])

HSP 1 Score: 68.5514 bits (166), Expect = 3.106e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 3

Query:  573 TLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGK 878
            +LPS+ ++        TD T T +F+G L P+ TE QL  LF  FGP+ +V+I           G+NCGFV F  R D E +++ L+G  + G  ++L WG+
Sbjct:  347 SLPSNTYN--------TDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI---------PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR 431

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967])

HSP 1 Score: 54.6842 bits (130), Expect = 5.821e-8
Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 3

Query:  618 ETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARG--RNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            ET    TNL++ N+N E T++Q  ELF +FGP+ S  +      E+ A G  +  GFV +    D  +A+E L  +E+ G ++ +G
Sbjct:  213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASL------EKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVG 292

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Yeast
Match: PUB1 (Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; human homolog Tia1 is critical for normal synaptic plasticity; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004961])

HSP 1 Score: 53.9138 bits (128), Expect = 7.462e-8
Identity = 24/81 (29.63%), Postives = 44/81 (54.32%), Query Frame = 3

Query:  633 TTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWG 875
            T NLF+G+LN  + ++ L   F  F    S  +MW   D +    R  GFV+F ++ D + A++ ++G ++ G  +++ W 
Sbjct:  161 TFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMW---DMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Yeast
Match: NAM8 (RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function [Source:SGD;Acc:S000001128])

HSP 1 Score: 51.2174 bits (121), Expect = 5.719e-7
Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 3

Query:  621 TDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTV 884
            TD   T +F+G L+  +TE +L   F  FG +  VKI           G+ CGFV +++R   E A+  ++G  I    ++L WG++ 
Sbjct:  308 TDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKI---------PVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSA 386

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
Match: EDO34857 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN56])

HSP 1 Score: 360.533 bits (924), Expect = 2.986e-112
Identity = 193/469 (41.15%), Postives = 275/469 (58.64%), Query Frame = 3

Query:  732 MWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSR--KMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPL 2132
            MWPR++EEK+R RNCGFVA+M R DG++A++ L G +I G+EMKLGWGK V +PPHPIYVPP + E   PPPPSGLPFNAQP      + N ++     FD          ETL N VVKV IP +R +L +I+R+VEFV+REG  FEA IMN+E+ NP  +FLFD QS EH YYRW+LYS L G+S   W T++F M++GG +W+PPP + +   I              ++ ++  +     +   + + +E    +   +    K  L+  QR++L ++L +L   +  I +AMVWCLEHAD A+++ + I   +       T   ++          +A LFL+SDILHN   K+ N S++RK  +  L QV  H+N  +  I ++IK+EQL+ +V  C  AW DW +Y  DFL  L+N FLG  E  A + +        +  ++     D DG PL++DGVPL
Sbjct:    1 MWPRTEEEKSRNRNCGFVAYMRRKDGDKAIKHLTGKDIMGFEMKLGWGKAVPLPPHPIYVPPDMEEDNTPPPPSGLPFNAQPDNNTPSSENSENLDPNGFDR---------ETLANAVVKVVIPKERGVLSMIHRVVEFVVREGPMFEAMIMNREINNPKMRFLFDNQSHEHTYYRWRLYSILQGDSPTKWCTEKFRMFEGGSWWKPPPCSQYQPTI---------LPPAAVQPVAPVVEEPPKAPTPSRRHHESSSSSSSRDK---KGGLSSRQRDKLEDMLRNLTVDRAKIADAMVWCLEHADCADEISECIAESLSL---LETPPQVK----------IARLFLLSDILHNCSVKIPNVSYFRKCFQARLVQVFTHMNATFKAINARIKAEQLRKQVTRCLSAWMDWAIYQPDFLVNLQNIFLGQQESLATTFKTLMGDSGVDAAIA-----DVDGLPLNLDGVPL 430

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
Match: EDO28276 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T6X8])

HSP 1 Score: 168.318 bits (425), Expect = 2.045e-47
Identity = 84/153 (54.90%), Postives = 104/153 (67.97%), Query Frame = 3

Query:  819 LEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLH 1277
            L + +G +I G+EMKLGWGK V +PPHPIYVPP + E   PPPPSGLPFNAQP      T + ++ +  D          ETL N VVKV IP +R +L +I+R+VEFV+REG  FEA IMN+E+ NP  +FLFD QS EH YYRW+LYS L 
Sbjct:   79 LAQPKGKDIMGFEMKLGWGKAVPLPPHPIYVPPDMEEDNTPPPPSGLPFNAQPD---NNTPSSENSENLDPNGFD----RETLANAVVKVVIPKERGVLSMIHRVVEFVVREGPMFEAMIMNREINNPKMRFLFDNQSHEHTYYRWRLYSILQ 224

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
Match: EDO34858 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN57])

HSP 1 Score: 80.8777 bits (198), Expect = 3.824e-17
Identity = 66/198 (33.33%), Postives = 109/198 (55.05%), Query Frame = 3

Query:   84 EEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHS-SEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPAT-LPSSPFDIDFPYDSET--DRTTTNLFLGNLNP 665
            E E RK +  E+ A V+  F+ +F++     KT+V+G T+NP +   + SE +G+LY+P+ K    +    +EK ++E + KP L  K KE+ K+KSNLE F EELK+ Q+ERE+R++ +K  T  +                  P++         +++ LP++ L + P D  F + S    D  TTNL++GN++P
Sbjct:   54 EVEERKKRDEEKCAEVFADFVASFDDSRVHGKTFVRGSTINPDTKEETISEDSGRLYKPMAKLSASL---IEEKLKAELSPKPDLKKKMKEKEKKKSNLELFKEELKRNQEERELRHKLKKGETTDI------------------PKE---------VLEALPSSFLLAQPKDDAFGFGSHDTGDPNTTNLYIGNISP 221

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
Match: EDO33926 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQW0])

HSP 1 Score: 52.373 bits (124), Expect = 7.640e-7
Identity = 26/78 (33.33%), Postives = 46/78 (58.97%), Query Frame = 3

Query:  636 TNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLG 869
            T L++G+L+  +TE  +  +F  FG + SV++++   D E  R +  GFV F      +RA+E++ G E+ G  +K+G
Sbjct:  215 TRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIY---DSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIG 289

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
Match: EDO31981 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWC6])

HSP 1 Score: 51.2174 bits (121), Expect = 1.317e-6
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 3

Query:  612 DSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNR----SDGERALEKLRGNEICGYEMKLGWGKTVLIPPHP 902
            D+ TDR+ T L++G L  ++TEQ L + F +FG L S+  M PR        +NC FV F +R    +  +R+  KL    + G  +K+ WGK+    P P
Sbjct:  225 DTPTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSIS-MVPR--------QNCAFVCFTSRAAAEAAADRSFNKL---ILKGRRLKIMWGKSQGQQPAP 313

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:101172204])

HSP 1 Score: 495.738 bits (1275), Expect = 3.278e-159
Identity = 331/844 (39.22%), Postives = 469/844 (55.57%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSS-EGAGKLYQPL----MKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSET-DRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV------EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPL----------DVDGVPLDSKAT--EATNSTEILDMFANPSSPQTKRI-------TKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKK-NDENRN 2456
            I KM+   R  T++   ++E +K +     A +Y++F+  FE   +   K +V+GG  N      ++ E  GKLY+P      +T   +P +   +F + F++K   + K  E+ K+KSNLE F EELKQ+Q+ER+ R++ +  V+ R E +     +     +S   R                   PSS  D   P   +  D +TTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+                + E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++FLF+ QSP HVYYRWKL++ L GEST  W+TD+F M+K G +WRPPPLNP+  G                       ++ +  +E    S + C              L + +R++L E+L  L P +  + EAM++CL HA++AE++++ I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y TI   ++SE  K +V+SCFRAW DW VYP  +L KL+N FLG+V      EPP +             ++  +P  D DG P+          DVDGVP+D      E  +   + D+   P  P  + I       +KE  F   PSKWE VD A+ +++ V  S+W++ E   E KK  D++D D  P S+ +++++  +    D   K+   N+E R 
Sbjct:   36 IGKMAVAKR--TLSKKEQDELKKKEDERAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFDAQTKSILPLETPPQFLA-FDRKQ-TVKKNTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVS-RFEPLAGMEGRRSSDGSSRRNR-------------------PSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPP-----PKNKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLFTILQGESTAKWRTDDFRMFKNGSFWRPPPLNPYLHG---------------------PYDDGEEEEEEEEGSKKGC--------------LKEDERDKLEEMLRGLSPKRGDVAEAMLFCLNHAEAAEEIVECIAESL----------SILKTP---LPKKIARLYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPYLIKLQNIFLGLVNLSADKEPPTV-------------IVEPEPAEDIDGAPIGEFVESTLLEDVDGVPIDGAPIDGEPIDGAPLDDIDGIPIKPMEEDIDGIPFDQSKEATFKVAPSKWEAVDEAELQAQAVTTSKWEIFEQPEETKKGEDSDD-DRSPRSEENQSYSNPIKDDADTKAKSSGMNEEKRT 788

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:101172204])

HSP 1 Score: 494.967 bits (1273), Expect = 3.809e-159
Identity = 331/843 (39.26%), Postives = 468/843 (55.52%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSS-EGAGKLYQPL----MKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIV------EPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPL----------DVDGVPLDSKAT--EATNSTEILDMFANPSSPQTKRI-------TKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKK-NDENRN 2456
            I KM+   R  T++   ++E +K +     A +Y++F+  FE   +   K +V+GG  N      ++ E  GKLY+P      +T   +P +   +F + F++K   + K  E+ K+KSNLE F EELKQ+Q+ER+ R++ +  V+ R E +              E R+S  D              P S  D+  P       +TTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+                + E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++FLF+ QSP HVYYRWKL++ L GEST  W+TD+F M+K G +WRPPPLNP+  G                       ++ +  +E    S + C              L + +R++L E+L  L P +  + EAM++CL HA++AE++++ I   +          SI  +    L + +A L+LVSD+L+NS AKV NAS+YRKY E  L Q+   LN  Y TI   ++SE  K +V+SCFRAW DW VYP  +L KL+N FLG+V      EPP +             ++  +P  D DG P+          DVDGVP+D      E  +   + D+   P  P  + I       +KE  F   PSKWE VD A+ +++ V  S+W++ E   E KK  D++D D  P S+ +++++  +    D   K+   N+E R 
Sbjct:   36 IGKMAVAKR--TLSKKEQDELKKKEDERAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFDAQTKSILPLETPPQFLA-FDRKQ-TVKKNTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVS-RFEPLAGM-----------EGRRSFLD-----------DCAPGS-HDVGDP-------STTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPP-----PKNKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLFTILQGESTAKWRTDDFRMFKNGSFWRPPPLNPYLHG---------------------PYDDGEEEEEEEEGSKKGC--------------LKEDERDKLEEMLRGLSPKRGDVAEAMLFCLNHAEAAEEIVECIAESL----------SILKTP---LPKKIARLYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPYLIKLQNIFLGLVNLSADKEPPTV-------------IVEPEPAEDIDGAPIGEFVESTLLEDVDGVPIDGAPIDGEPIDGAPLDDIDGIPIKPMEEDIDGIPFDQSKEATFKVAPSKWEAVDEAELQAQAVTTSKWEIFEQPEETKKGEDSDD-DRSPRSEENQSYSNPIKDDADTKAKSSGMNEEKRT 776

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
Match: zgc:163098 (U2 snRNP-associated SURP motif-containing protein [Source:NCBI gene;Acc:101156759])

HSP 1 Score: 417.542 bits (1072), Expect = 6.280e-131
Identity = 279/761 (36.66%), Postives = 378/761 (49.67%), Query Frame = 3

Query:  129 VYQQFIETFE--EPPKVNKTWVKGGTVNPGSSTHSSE-GAGKLYQPLMK----TVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPY-SNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVE-----------------------------PPALXXXXXXXXXXXXXLLSVKPLVDYDGDPL-----DVDGVPLDSKATEATNSTEILDMFANPSS-PQTKRITKEPLFVPSKWETVDPADEESE 2282
            V+++F+ +FE  +  KV KT+V+GG VN      ++E    KLY+P  K    T         E  ++ F +K           KRKSNLE F EELK +Q+ERE R++++K          N      E            DL+I     PL              YD  T   TTNL++  ++P++ E+ LC  F ++GPLASVKIMWPR++EE+ R  N  FVAFM R D ERA+  L G  I G+EMKLGWGK   IPP P+Y P  +     PPPPSGLPFNAQPR+  +              S S  +L +TL   VVKV IPT+R LL LI+RM+EFV+REG  FEA IMNKE  NP+++FLFD +S +HVYYRWKL+S L GE+   W+T +F +++GG  WRPP LN +                                      S  M +E+P      + K QL    ++RL  +L +L P +  I  AM++CL  AD+AE+V+ +I                       L   +A L+LVSD+LHNSCAKV  AS+YRKY E  LPQ+   LN  +  I +++++EQ K KV+ CFRAW DW +YP  +L  L+N FLG  +                             P   S +  +      + L   P+ D DG PL     D+DGVPLD   T +       +   +  + PQ K          SKW+T+   D E E
Sbjct:   34 VFEEFLASFESNDDRKV-KTFVRGGIVNATKEEEAAEVKKSKLYRPATKFSPVTHHVSASSSAESKKAAFKRK--------ADEKRKSNLELFKEELKLIQEEREERHKRKK----------NDAGGGAEGGTCA-------DLDI-----PLSGR--------SMLYDDLTVPVTTNLYINCISPKMNEEMLCREFCKYGPLASVKIMWPRTEEERGRTSNRAFVAFMTRKDAERAMAALDGKVIMGFEMKLGWGKPARIPPQPLYTP--IGVRAAPPPPSGLPFNAQPRDRFRND-------FTKPLSSSKSELDKTLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPMFEAIIMNKEKSNPDYRFLFDNKSQDHVYYRWKLFSILQGETPSKWRTADFRLFRGGSLWRPPVLNSY--------------------------------------SESMEVEDPVPPEEELKKGQLRAEHKQRLETLLKELTPSREDIANAMLFCLGRADAAEEVVGLIADSFSLL-------------QTPLQIKMARLYLVSDVLHNSCAKVAGASYYRKYFETKLPQIFGDLNAAHKNIQARLQAEQFKQKVMICFRAWEDWAIYPEPYLIHLQNIFLGYAKAGEEVTETVEEESAEIDGAPLDRTALDGLPLGRSVDDIDGCPLGWDPLDGVPVDDIDGVPLGVSSDDIDGVPLDEGNTLSRIPLSKWEKMGDSKTFPQAK--------TESKWDTIGDQDSEDE 687

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
Match: u2surp (U2 snRNP associated SURP domain containing [Source:NCBI gene;Acc:101172204])

HSP 1 Score: 400.593 bits (1028), Expect = 1.406e-123
Identity = 293/844 (34.72%), Postives = 426/844 (50.47%), Query Frame = 3

Query:   33 IIKMSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVN-KTWVKGGTVNPGSSTHSS-EGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPK--------EQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPL----------DVDGVPLDSKAT--EATNSTEILDMFANPSSPQTKRI-------TKEPLF--VPSKWETVDPADEESEIV-QSRWQLMESQSEDKKS---SDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKK-NDENRN 2456
            I KM+   R  T++   ++E +K +     A +Y++F+  FE   +   K +V+GG  N      ++ E  GKLY+P            K +F ++     PL   P+        E+ K+KSNLE F EELKQ+Q+ER+ R++ +  V+ R E +            S+  R++    + +  +  +         D+  P       +TTNL+LGN+NP++ E+ LC+ FGR+GPLASVKIMWPR+DEE+AR RNCGFVAFMNR D ERAL+ L G  I  +EMKLGWGK V IPPHPIY+PP +ME   PPPPSGLPFNAQPRE L+                + E+  +TL   +VKV IPT+R LL LI+RM+EFV+REG  FEA IMN+E+ NP ++  +D       Y+         GEST  W+TD+F M+K G +WRPPPLNP+  G                       ++ +  +E    S + C              L + +R++L E+L  L P +  + EAM++CL HA++AE++++ I   +         K+        L+Q +  + L          K+             L Q+   LN  Y TI   ++SE  K +V+SCFRAW DW VYP  +L KL+N FLG+V   A                  +P  D DG P+          DVDGVP+D      E  +   + D+   P  P  + I       +KE  F   PSKWE VD A+ +++ V  S+W++ E   E KKS    ++ D D  P S+ +++++  +    D   K+   N+E R 
Sbjct:   40 IGKMAVAKR--TLSKKEQDELKKKEDERAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKP------------KSRFDAQTKSILPLETPPQFLTVKKNTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVS-RFEPL------------SDLCRRTATGHSFLSFVSAVLDDCAPGSHDVGDP-------STTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPP-----PKNKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRSSYD------CYF-------FQGESTAKWRTDDFRMFKNGSFWRPPPLNPYLHG---------------------PYDDGEEEEEEEEGSKKGC--------------LKEDERDKLEEMLRGLSPKRGDVAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKA--RCAVQLLSQSIQCILL---------QKI-----------TKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPYLIKLQNIFLGLVNLSA----------------DKEPPTDIDGAPIGEFVESTLLEDVDGVPIDGAPIDGEPIDGAPLDDIDGIPIKPMEEDIDGIPFDQSKEATFKVAPSKWEAVDEAELQAQAVTTSKWEIFEQPEETKKSVFQGEDSDDDRSPRSEENQSYSNPIKDDADTKAKSSGMNEEKRT 758

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
Match: zgc:163098 (U2 snRNP-associated SURP motif-containing protein [Source:NCBI gene;Acc:101156759])

HSP 1 Score: 383.259 bits (983), Expect = 1.522e-118
Identity = 232/601 (38.60%), Postives = 313/601 (52.08%), Query Frame = 3

Query:  342 KPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPY-SNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLD---VDGVPL 2132
            K K   KRKSNLE F EELK +Q+ERE R++++K          N      E            DL+I     PL              YD  T   TTNL++  ++P++ E+ LC  F ++GPLASVKIMWPR++EE+ R  N  FVAFM R D ERA+  L G  I G+EMKLGWGK   IPP P+Y P  +     PPPPSGLPFNAQPR+  +     D  K         + L +   +   ++ +   R LL LI+RM+EFV+REG  FEA IMNKE  NP+++FLFD +S +HVYYRWKL+S L GE+   W+T +F +++GG  WRPP LN +                                      S  M +E+P      + K QL    ++RL  +L +L P +  I  AM++CL  AD+AE+V+ +I                       L   +A L+LVSD+LHNSCAKV  AS+YRKY E  LPQ+   LN  +  I +++++EQ K KV+ CFRAW DW +YP  +L  L+N FLG  +      E    +             + DG PLD   +DG+PL
Sbjct:   74 KRKADEKRKSNLELFKEELKLIQEEREERHKRKK----------NDAGGGAEGGTCA-------DLDI-----PLSGR--------SMLYDDLTVPVTTNLYINCISPKMNEEMLCREFCKYGPLASVKIMWPRTEEERGRTSNRAFVAFMTRKDAERAMAALDGKVIMGFEMKLGWGKPARIPPQPLYTP--IGVRAAPPPPSGLPFNAQPRDRFRN----DFTKPLSSSKSELDKLKKKKTHSDARLFV--HRNLLFLIHRMIEFVVREGPMFEAIIMNKEKSNPDYRFLFDNKSQDHVYYRWKLFSILQGETPSKWRTADFRLFRGGSLWRPPVLNSY--------------------------------------SESMEVEDPVPPEEELKKGQLRAEHKQRLETLLKELTPSREDIANAMLFCLGRADAAEEVVGLIADSFSLL-------------QTPLQIKMARLYLVSDVLHNSCAKVAGASYYRKYFETKLPQIFGDLNAAHKNIQARLQAEQFKQKVMICFRAWEDWAIYPEPYLIHLQNIFLGYAKAGEEVTETVEEES-----------AEIDGAPLDRTALDGLPL 574

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST
Match: SMESG000026341.1 (SMESG000026341.1)

HSP 1 Score: 1788.08 bits (4630), Expect = 0.000e+0
Identity = 913/917 (99.56%), Postives = 915/917 (99.78%), Query Frame = 3

Query:   42 MSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALXXXXXXXXXXXXXLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLFVPSKWETVDPADEESEIVQSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKKNDENRNITSLVSYGXXXXXXXXXXXXXXXXXXXLLPKLDVRLDKEYKSTKNKPDRRSNISPYNDNTYXXXXXXXXXXXXHDYDSSYSRSNKSETVEIRSRVIRLDHRDDSDKNRLRDP 2792
            MSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKS+ENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALSEEKSNVKVSEENLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLFVPSKWETVDPADEESEIVQSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKKNDENRNITSLVSYGNESSEEDREANDD+DDVDNLL KLD RLDKEYKSTKNKPDRRSNISPYNDNTYRSSPSKRSKTKRHDYDSSYSRSNKSETVEIRSRVIRLDHRDDSDKNRLRDP
Sbjct:    1 MSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVKGGTVNPGSSTHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLGKPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKEPEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKPPPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVTIPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEHVYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELIEDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLTDSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTIGYATDKSVENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENSLPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLKNQFLGIVEPPALSEEKSNVKVSEENLLSVKPLVDYDGDPLDVDGVPLDSKATEATNSTEILDMFANPSSPQTKRITKEPLFVPSKWETVDPADEESEIVQSRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKKNDENRNITSLVSYGNESSEEDREANDDDDDVDNLLSKLDARLDKEYKSTKNKPDRRSNISPYNDNTYRSSPSKRSKTKRHDYDSSYSRSNKSETVEIRSRVIRLDHRDDSDKNRLRDP 917

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BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST
Match: SMESG000077958.1 (SMESG000077958.1)

HSP 1 Score: 54.6842 bits (130), Expect = 3.007e-7
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 3

Query:  633 TTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKT 881
            T  LF+GNL   +TE  L ELFG+FG +  + I  P S+ +   G +  F+ F N     +A  ++ G+ I   ++K+G+GK 
Sbjct:  217 TRTLFVGNLPCSVTESNLKELFGKFGQVTDIDIKKPTSNRQ---GNSYAFIKFENLDIANQAKNEMSGHMIGKCQIKIGFGKV 296

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST
Match: SMESG000077958.1 (SMESG000077958.1)

HSP 1 Score: 54.299 bits (129), Expect = 3.519e-7
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 3

Query:  633 TTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKT 881
            T  LF+GNL   +TE  L ELFG+FG +  + I  P S+ +   G +  F+ F N     +A  ++ G+ I   ++K+G+GK 
Sbjct:   88 TRTLFVGNLPCSVTESNLKELFGKFGQVTDIDIKKPTSNRQ---GNSYAFIKFENLDIANQAKNEMSGHMIGKCQIKIGFGKV 167

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST
Match: SMESG000062663.1 (SMESG000062663.1)

HSP 1 Score: 52.7582 bits (125), Expect = 8.488e-7
Identity = 30/83 (36.14%), Postives = 42/83 (50.60%), Query Frame = 3

Query:  627 RTTTNLFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWG 875
            +T TN+++ N    L  Q L ELF  FG + SVK+M      EK   +  GFV F N SD  +++EKL    I    + +G  
Sbjct:  180 KTFTNVYVKNFGIHLNNQSLEELFSPFGEIISVKVMAT----EKGISKGFGFVCFKNHSDALKSIEKLNETTIIDKVIYVGLA 258

[Close]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST
Match: SMESG000022369.1 (SMESG000022369.1)

HSP 1 Score: 48.9062 bits (115), Expect = 3.653e-6
Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 3

Query:  642 LFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAFMNRSDGERALEKLRGNEICGYEMKLGWGKTV 884
            L + NL+ E TE+ L E+F R+G +  V ++    D+   R R  GFV F N  D E A EK+ G  + G ++++ +  T+
Sbjct:   20 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVI---DKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTL 97

The following BLAST results are available for this feature:

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Celegans
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Zebrafish
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Yeast
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
U2SURP	2.812e-160	42.52	U2 snRNP associated SURP domain containing [Source...	[more]
U2SURP	1.502e-158	42.33	U2 snRNP associated SURP domain containing [Source...	[more]
U2SURP	6.298e-62	45.59	U2 snRNP associated SURP domain containing [Source...	[more]
U2SURP	1.966e-58	47.37	U2 snRNP associated SURP domain containing [Source...	[more]
PABPC1	1.888e-8	30.86	poly(A) binding protein cytoplasmic 1 [Source:HGNC...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2


Match Name	E-value	Identity	Description
C07H6.4	5.134e-80	30.57	pep chromosome:WBcel235:III:7499677:7503241:1 gene...	[more]
tiar-3	2.043e-6	23.89	TIA-1/TIAL RNA binding protein homolog [Source:Un...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CG9346	5.256e-158	39.08	gene:FBgn0034572 transcript:FBtr0071526	[more]
Caper	5.678e-7	34.21	gene:FBgn0031883 transcript:FBtr0089640	[more]
Caper	5.678e-7	34.21	gene:FBgn0031883 transcript:FBtr0089636	[more]
Rox8	4.653e-6	26.74	gene:FBgn0005649 transcript:FBtr0084592	[more]
Rox8	4.653e-6	26.74	gene:FBgn0005649 transcript:FBtr0084594	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
u2surp	3.383e-153	40.36	U2 snRNP-associated SURP domain containing [Source...	[more]
u2surp	1.982e-152	40.36	U2 snRNP-associated SURP domain containing [Source...	[more]
zgc:163098	5.453e-147	37.19	zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]	[more]
zgc:163098	5.453e-147	37.19	zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]	[more]
zgc:163098	1.107e-146	36.96	zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
u2surp	3.885e-163	42.60	U2 snRNP associated SURP domain containing [Source...	[more]
u2surp	1.132e-133	46.10	U2 snRNP associated SURP domain containing [Source...	[more]
u2surp	1.185e-126	39.03	U2 snRNP associated SURP domain containing [Source...	[more]
u2surp	3.433e-126	39.03	U2 snRNP associated SURP domain containing [Source...	[more]
u2surp	7.253e-126	39.03	U2 snRNP associated SURP domain containing [Source...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
U2surp	2.929e-160	42.65	U2 snRNP-associated SURP domain containing [Source...	[more]
U2surp	3.073e-160	42.65	U2 snRNP-associated SURP domain containing [Source...	[more]
U2surp	3.092e-160	42.46	U2 snRNP-associated SURP domain containing [Source...	[more]
U2surp	2.699e-58	47.70	U2 snRNP-associated SURP domain containing [Source...	[more]
Pabpc6	3.251e-9	34.62	poly(A) binding protein, cytoplasmic 6 [Source:MGI...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|O15042\|SR140_HUMAN	1.350e-159	42.52	U2 snRNP-associated SURP motif-containing protein ...	[more]
sp\|Q6NV83\|SR140_MOUSE	2.149e-159	42.65	U2 snRNP-associated SURP motif-containing protein ...	[more]
sp\|Q5R7X2\|SR140_PONAB	5.090e-159	42.46	U2 snRNP-associated SURP motif-containing protein ...	[more]
sp\|Q9C5J3\|RRC1_ARATH	3.626e-95	34.00	Protein RRC1 OS=Arabidopsis thaliana OX=3702 GN=RR...	[more]
sp\|F4KIA8\|RRC1L_ARATH	3.235e-74	34.29	Protein RRC1-like OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4S2M2L5	0.000e+0	42.83	Uncharacterized protein OS=Opisthorchis felineus O...	[more]
A0A4V3SG04	0.000e+0	42.83	Uncharacterized protein OS=Opisthorchis felineus O...	[more]
A0A4Z2DBL8	0.000e+0	44.31	U2 snRNP-associated SURP motif-containing protein ...	[more]
A0A3Q0KRB0	0.000e+0	44.09	Uncharacterized protein OS=Schistosoma mansoni OX=...	[more]
A0A183QJ42	0.000e+0	44.05	Uncharacterized protein OS=Schistosoma rodhaini OX...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
u2surp	1.579e-148	39.80	U2 snRNP-associated SURP domain containing [Source...	[more]
u2surp	2.472e-148	39.87	U2 snRNP-associated SURP domain containing [Source...	[more]
zgc:163098	6.468e-128	36.11	zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]	[more]
zgc:163098	1.207e-59	39.71	zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]	[more]
zgc:163098	2.232e-59	39.65	zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pabpc4	3.315e-7	33.33	poly(A) binding protein, cytoplasmic 4 (inducible ...	[more]
tia1l	1.322e-6	26.14	cytotoxic granule-associated RNA binding protein 1...	[more]
RBM39	1.420e-6	35.53	RNA binding motif protein 39 [Source:HGNC Symbol;A...	[more]
rbm22	2.110e-6	33.68	RNA binding motif protein 22 [Source:NCBI gene;Acc...	[more]
RBM39	3.020e-6	32.47	RNA binding motif protein 39 [Source:HGNC Symbol;A...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4


Match Name	E-value	Identity	Description
NGR1	3.106e-12	37.25	RNA binding protein that negatively regulates grow...	[more]
PAB1	5.821e-8	34.88	Poly(A) binding protein; part of the 3'-end RNA-pr...	[more]
PUB1	7.462e-8	29.63	Poly (A)+ RNA-binding protein; abundant mRNP-compo...	[more]
NAM8	5.719e-7	31.82	RNA binding protein, component of the U1 snRNP pro...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO34857	2.986e-112	41.15	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28276	2.045e-47	54.90	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34858	3.824e-17	33.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33926	7.640e-7	33.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO31981	1.317e-6	35.64	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
u2surp	3.278e-159	39.22	U2 snRNP associated SURP domain containing [Source...	[more]
u2surp	3.809e-159	39.26	U2 snRNP associated SURP domain containing [Source...	[more]
zgc:163098	6.280e-131	36.66	U2 snRNP-associated SURP motif-containing protein ...	[more]
u2surp	1.406e-123	34.72	U2 snRNP associated SURP domain containing [Source...	[more]
zgc:163098	1.522e-118	38.60	U2 snRNP-associated SURP motif-containing protein ...	[more]

BLAST of U2 snRNP-associated SURP motif-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000026341.1	0.000e+0	99.56	SMESG000026341.1	[more]
SMESG000077958.1	3.007e-7	34.94	SMESG000077958.1	[more]
SMESG000077958.1	3.519e-7	34.94	SMESG000077958.1	[more]
SMESG000062663.1	8.488e-7	36.14	SMESG000062663.1	[more]
SMESG000022369.1	3.653e-6	34.57	SMESG000022369.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30014392 ID=SMED30014392|Name=U2 snRNP-associated SURP motif-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3003bp
CTGTATTTCTTATGAATTTTTATTTCTATTAAATAATTAAGATGTCATAT
CGATCTCGATTTAAAACTGTTGCTGATACTATTGAAGAGGAAGCTCGTAA
ACTACAAGCAAATGAAGAAACTGCAATTGTTTATCAACAGTTTATTGAAA
CTTTTGAGGAGCCACCGAAAGTCAATAAAACTTGGGTAAAGGGTGGCACA
GTCAATCCTGGAAGTTCCACCCATAGTTCTGAAGGAGCTGGTAAATTATA
TCAGCCATTAATGAAAACCGTTGACAAAATTCCCGATAAATTCAAAGAAA
AATTTCAGTCTGAATTTAATAAAAAACCACCACTTCTTGGAAAACCAAAG
GAACAAAGTAAGAGAAAGTCGAATTTAGAAGCATTTAGCGAGGAATTAAA
ACAACTACAACAAGAAAGAGAAATGCGAAATCAAAAACAAAAACTTGTGA
CTGAACGAGTTGAAGACATAAATAATAAATTTGTTAAAGAACCCGAAATA
AAGAACAGCGAAGAGCCACGAAAATCACGATTTGATTTAAACATAATTCC
AATAATTAAGCCTTTACCTGCTACTCTTCCTTCCTCTCCTTTTGACATTG
ATTTTCCTTATGACTCTGAAACAGATCGAACGACTACAAATTTATTTCTC
GGAAATCTTAATCCCGAACTTACAGAACAGCAATTATGTGAATTATTTGG
CAGATTCGGACCGTTGGCCAGCGTAAAAATAATGTGGCCACGAAGTGACG
AAGAGAAAGCTCGAGGTCGCAATTGCGGTTTTGTAGCGTTCATGAATCGT
TCTGATGGAGAACGCGCATTGGAAAAGTTGCGGGGAAATGAAATTTGTGG
CTATGAAATGAAATTAGGTTGGGGGAAAACGGTATTGATTCCGCCTCATC
CGATTTACGTGCCGCCGATATTGATGGAAATGATAAAACCGCCACCACCA
AGCGGATTGCCATTCAATGCCCAACCGAGAGAATGGTTACAAAAAACCGG
AAATGTGGACAGCCGAAAAATGTTCGACATGTGTTCAATGAGCGATGAGG
ATTTGGCGGAAACATTGAAAAATTGCGTCGTTAAAGTGACTATCCCAACA
GATCGGCAGTTGCTCCAGTTGATTAATCGAATGGTCGAATTCGTCATCAG
AGAAGGTGTCGAATTCGAAGCGTTTATTATGAATAAGGAAATGAGAAATC
CTAATTTTAAGTTCCTATTTGATTTCCAATCGCCCGAGCACGTTTATTAT
CGTTGGAAATTGTATTCGACACTCCATGGAGAAAGTACTAAAAGCTGGAA
GACAGACGAATTTATTATGTACAAAGGAGGTCCGTATTGGCGGCCTCCTC
CACTAAATCCTTTCACTAGTGGAATCCCAGAGGAATTGATTGAGGATATT
GATTTCTCCAAGTTGACACTTGAGAACATTTCTCAAACGCTGAATAACGC
TGATTCATCAAAAGAATCAGCCAATCAATCAAATGAGATGTGCATGGAAA
ATCCATACAGTAACAATCACGTTTACAAGCGACAACTGACTGACAGTCAA
CGGGAACGATTGATTGAGATATTGATTGATTTGGAACCGATCAAACATTC
AATCGGCGAGGCAATGGTCTGGTGCTTGGAACACGCCGATTCTGCAGAGG
ACGTGTTGGATATCATTGTCACTCAGATTGACAAAACGATTGGATACGCT
ACTGACAAATCTATAGAGAACTCAAATGCCGCCGGTCTCAATCAAATTGT
CGCTTTGTTATTTCTCGTGTCGGATATCCTCCACAATTCATGTGCCAAAG
TGCGAAATGCTTCATTTTATCGGAAATACATCGAAAATAGTCTGCCTCAG
GTTATGGTGCACCTAAATCAATATTACCTAACAATTACCAGTAAAATTAA
ATCCGAGCAGCTCAAGTATAAAGTACTTTCTTGTTTTCGTGCTTGGGGCG
ACTGGTACGTTTATCCATTTGACTTCCTACAGAAACTAAAGAACCAGTTC
CTTGGTATTGTTGAACCGCCGGCTTTATCAGAAGAAAAATCCAATGTAAA
AGTTTCCGAAGAAAATCTACTCAGTGTTAAACCACTTGTCGATTATGACG
GGGACCCACTAGACGTTGACGGTGTCCCATTGGACAGTAAAGCCACAGAA
GCAACAAATAGCACGGAAATATTGGATATGTTTGCCAATCCTTCATCGCC
CCAAACGAAACGAATCACCAAAGAACCGTTGTTTGTACCCAGTAAATGGG
AAACAGTTGATCCAGCAGATGAAGAAAGTGAAATCGTTCAAAGTCGTTGG
CAGTTAATGGAATCTCAATCGGAAGATAAGAAATCATCAGACAATGAAGA
TCCCGATGGATATCCATTGTCAGATAATGATGAGAATTTCAATTTGTCAA
TGATCAAATCTCACGATCTCAGTCCTAAGAATAAGAAAAATGATGAGAAT
AGAAATATCACGAGTTTGGTTTCTTATGGAAATGAATCTTCGGAAGAAGA
TCGGGAAGCAAACGATGACGAGGACGACGTCGACAATTTATTGCCCAAAC
TTGATGTTCGCCTAGACAAAGAATACAAATCCACTAAAAACAAACCAGAC
CGACGGAGCAATATCAGCCCGTATAATGACAATACTTATCGATCGTCACC
ATCGAAACGATCAAAAACTAAACGACATGACTATGATTCGTCTTATAGTA
GATCGAATAAAAGTGAAACAGTTGAAATTCGTTCTAGAGTTATTCGACTG
GATCATAGGGATGATTCGGATAAAAATCGATTGAGGGATCCTAAACGGCA
TCATGATAGTGATCAACAATCAAGCCATTCTCAAAGTAAACGGTCGAGAA
GGTCACGTAGTAGATCGAGGTCAAGCAGAAAATCACACAAAAGGAAATCC
AACAAGCGTTAATAAATCAATTTTTGTTTTAATACAATGTAGTCTTGTTT
TGCAGTATATTTGAAAGACTGAAATTGTGTATGAAAGAATGATTAGAAAT
CAC

protein sequence of SMED30014392-orf-1

>SMED30014392-orf-1 ID=SMED30014392-orf-1|Name=SMED30014392-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=957bp
MSYRSRFKTVADTIEEEARKLQANEETAIVYQQFIETFEEPPKVNKTWVK
GGTVNPGSSTHSSEGAGKLYQPLMKTVDKIPDKFKEKFQSEFNKKPPLLG
KPKEQSKRKSNLEAFSEELKQLQQEREMRNQKQKLVTERVEDINNKFVKE
PEIKNSEEPRKSRFDLNIIPIIKPLPATLPSSPFDIDFPYDSETDRTTTN
LFLGNLNPELTEQQLCELFGRFGPLASVKIMWPRSDEEKARGRNCGFVAF
MNRSDGERALEKLRGNEICGYEMKLGWGKTVLIPPHPIYVPPILMEMIKP
PPPSGLPFNAQPREWLQKTGNVDSRKMFDMCSMSDEDLAETLKNCVVKVT
IPTDRQLLQLINRMVEFVIREGVEFEAFIMNKEMRNPNFKFLFDFQSPEH
VYYRWKLYSTLHGESTKSWKTDEFIMYKGGPYWRPPPLNPFTSGIPEELI
EDIDFSKLTLENISQTLNNADSSKESANQSNEMCMENPYSNNHVYKRQLT
DSQRERLIEILIDLEPIKHSIGEAMVWCLEHADSAEDVLDIIVTQIDKTI
GYATDKSIENSNAAGLNQIVALLFLVSDILHNSCAKVRNASFYRKYIENS
LPQVMVHLNQYYLTITSKIKSEQLKYKVLSCFRAWGDWYVYPFDFLQKLK
NQFLGIVEPPALSEEKSNVKVSEENLLSVKPLVDYDGDPLDVDGVPLDSK
ATEATNSTEILDMFANPSSPQTKRITKEPLFVPSKWETVDPADEESEIVQ
SRWQLMESQSEDKKSSDNEDPDGYPLSDNDENFNLSMIKSHDLSPKNKKN
DENRNITSLVSYGNESSEEDREANDDEDDVDNLLPKLDVRLDKEYKSTKN
KPDRRSNISPYNDNTYRSSPSKRSKTKRHDYDSSYSRSNKSETVEIRSRV
IRLDHRDDSDKNRLRDPKRHHDSDQQSSHSQSKRSRRSRSRSRSSRKSHK
RKSNKR*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000020	protonephridia
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR035967	SWAP/Surp_sf
IPR008942	ENTH_VHS
IPR035009	SR140_RRM
IPR035979	RBD_domain_sf
IPR006569	CID_dom
IPR000504	RRM_dom
IPR000061	Surp
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **molecular function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0000166	nucleotide binding

Vocabulary: **biological process**
Term	Definition
GO:0006396	RNA processing

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	COILS	Coil	Coil	coord: 105..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 854..869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 833..853
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 875..931
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 932..956
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 757..771
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 755..956
None	No IPR available	PANTHER	PTHR23140:SF0	SWAP/SURP DOMAIN-CONTAINING PROTEIN	coord: 12..944
None	No IPR available	PANTHER	PTHR23140	RNA PROCESSING PROTEIN LD23810P	coord: 12..944
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 527..651 e-value: 5.89532E-4 score: 38.716
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 506..654 e-value: 5.0E-13 score: 59.3
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 499..657 score: 30.779
IPR000061	SWAP/Surp	SMART	SM00648	surpneu2	coord: 358..412 e-value: 3.6E-19 score: 79.7
IPR000061	SWAP/Surp	PFAM	PF01805	Surp	coord: 359..409 e-value: 6.3E-17 score: 61.3
IPR000061	SWAP/Surp	PROSITE	PS50128	SURP	coord: 360..403 score: 13.999
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 200..276 e-value: 4.4E-18 score: 76.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 201..273 e-value: 5.6E-14 score: 51.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 199..280 score: 16.432
IPR035967	SWAP/Surp superfamily	GENE3D	G3DSA:1.10.10.790		coord: 332..416 e-value: 2.9E-19 score: 70.4
IPR035967	SWAP/Surp superfamily	SUPERFAMILY	SSF109905	Surp module (SWAP domain)	coord: 334..413
IPR008942	ENTH/VHS	GENE3D	G3DSA:1.25.40.90		coord: 498..655 e-value: 1.4E-26 score: 95.0
IPR035009	SR140, RNA recognition motif	CDD	cd12223	RRM_SR140	coord: 198..281 e-value: 1.10527E-52 score: 176.3
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 185..280