SMED30014301
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30014301 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of SMED30014301 vs. Ensembl Human
Match: BIRC2 (baculoviral IAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:590]) HSP 1 Score: 54.6842 bits (130), Expect = 9.325e-9 Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 2 Query: 89 RPWKMRKV--IYSQRRVRYE-ELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRIN 373 P R V I S R Y + EE R+LT+ + T E+A GF++ G D V C C G+LS+WE + A EH R F CPF N Sbjct: 119 NPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPL-TFLSPSELARAGFYYIGPG---DRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLEN 212
BLAST of SMED30014301 vs. Ensembl Human
Match: BIRC2 (baculoviral IAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:590]) HSP 1 Score: 55.0694 bits (131), Expect = 9.692e-9 Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 2 Query: 89 RPWKMRKV--IYSQRRVRYE-ELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRIN 373 P R V I S R Y + EE R+LT+ + T E+A GF++ G D V C C G+LS+WE + A EH R F CPF N Sbjct: 159 NPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPL-TFLSPSELARAGFYYIGPG---DRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLEN 252
BLAST of SMED30014301 vs. Ensembl Human
Match: XIAP (X-linked inhibitor of apoptosis [Source:HGNC Symbol;Acc:HGNC:592]) HSP 1 Score: 53.9138 bits (128), Expect = 2.343e-8 Identity = 30/106 (28.30%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY + Y EE R +F++ + +E+A+ G +++G + D+V C C G+L +WE + A EH R F C F + N+++R+++ Sbjct: 143 TGQVVDISDTIYPRNPAMY----SEEARLKSFQNWPDYAHLTPRELASAGLYYTG---IGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSES 241
BLAST of SMED30014301 vs. Ensembl Human
Match: XIAP (X-linked inhibitor of apoptosis [Source:HGNC Symbol;Acc:HGNC:592]) HSP 1 Score: 53.9138 bits (128), Expect = 2.343e-8 Identity = 30/106 (28.30%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY + Y EE R +F++ + +E+A+ G +++G + D+V C C G+L +WE + A EH R F C F + N+++R+++ Sbjct: 143 TGQVVDISDTIYPRNPAMY----SEEARLKSFQNWPDYAHLTPRELASAGLYYTG---IGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSES 241
BLAST of SMED30014301 vs. Ensembl Human
Match: XIAP (X-linked inhibitor of apoptosis [Source:HGNC Symbol;Acc:HGNC:592]) HSP 1 Score: 53.9138 bits (128), Expect = 2.343e-8 Identity = 30/106 (28.30%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY + Y EE R +F++ + +E+A+ G +++G + D+V C C G+L +WE + A EH R F C F + N+++R+++ Sbjct: 143 TGQVVDISDTIYPRNPAMY----SEEARLKSFQNWPDYAHLTPRELASAGLYYTG---IGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSES 241
BLAST of SMED30014301 vs. Ensembl Fly
Match: Diap2 (gene:FBgn0015247 transcript:FBtr0087297) HSP 1 Score: 50.0618 bits (118), Expect = 2.485e-7 Identity = 35/117 (29.91%), Postives = 51/117 (43.59%), Query Frame = 2 Query: 35 IKTLVIAIQHYTSF------DTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKD--NKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCP 361 I ++V+A H + D G V+ S +L E R +TFKD N T + +A GF++ D V C++C G ++ WEK + A EH R F CP Sbjct: 72 ICSMVLAPNHCGNVPRSQESDNEGN-----SVVDSPESCSCPDLLLEANRLVTFKDWPNPNIT---PQALAKAGFYYLNRL---DHVKCVWCNGVIAKWEKNDNAFEEHKRFFPQCP 177
BLAST of SMED30014301 vs. Ensembl Fly
Match: Diap2 (gene:FBgn0015247 transcript:FBtr0087296) HSP 1 Score: 50.0618 bits (118), Expect = 2.485e-7 Identity = 35/117 (29.91%), Postives = 51/117 (43.59%), Query Frame = 2 Query: 35 IKTLVIAIQHYTSF------DTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKD--NKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCP 361 I ++V+A H + D G V+ S +L E R +TFKD N T + +A GF++ D V C++C G ++ WEK + A EH R F CP Sbjct: 72 ICSMVLAPNHCGNVPRSQESDNEGN-----SVVDSPESCSCPDLLLEANRLVTFKDWPNPNIT---PQALAKAGFYYLNRL---DHVKCVWCNGVIAKWEKNDNAFEEHKRFFPQCP 177
BLAST of SMED30014301 vs. Ensembl Zebrafish
Match: birc7 (baculoviral IAP repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-35]) HSP 1 Score: 53.9138 bits (128), Expect = 1.345e-8 Identity = 34/94 (36.17%), Postives = 43/94 (45.74%), Query Frame = 2 Query: 122 QRRVRYEE-----LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 QR R E +R EE+R TF + +E+A GF + G D V C C+G L HW G+T + EH R F TC DV N Sbjct: 30 QRSARMEAEVRLGMRSEEERLQTFHNWPSDAAVSPEELARAGFHYLG---YGDTVQCFCCEGILRHWVDGDTPRGEHERHFPTCGLMRGRDVGN 120 HSP 2 Score: 52.373 bits (124), Expect = 4.432e-8 Identity = 34/128 (26.56%), Postives = 59/128 (46.09%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGG------EKRITIIKSFEDPAELI 502 Y E+ E+ R TF + Q +A GFF++G D V C +C G L +WE G+ +EH + F C + + +++ + ++QS + + +GG IT ++S P E + Sbjct: 153 YSEMETEDNRRSTFHNWPTGAAVQPDTLARAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPQCEYLL----QSRGQEYVRNVQQSFFNMNGRGGGSLSSAAGNITPVRSDLSPEEQL 273
BLAST of SMED30014301 vs. Ensembl Zebrafish
Match: birc7 (baculoviral IAP repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-35]) HSP 1 Score: 53.5286 bits (127), Expect = 1.973e-8 Identity = 34/94 (36.17%), Postives = 43/94 (45.74%), Query Frame = 2 Query: 122 QRRVRYEE-----LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 QR R E +R EE+R TF + +E+A GF + G D V C C+G L HW G+T + EH R F TC DV N Sbjct: 10 QRSARMEAEVRLGMRSEEERLQTFHNWPSDAAVSPEELARAGFHYLG---YGDTVQCFCCEGILRHWVDGDTPRGEHERHFPTCGLMRGRDVGN 100 HSP 2 Score: 50.0618 bits (118), Expect = 3.265e-7 Identity = 25/78 (32.05%), Postives = 38/78 (48.72%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI 370 Y E+ E+ R TF + Q +A GFF++G D V C +C G L +WE G+ +EH + F C + + Sbjct: 133 YSEMETEDNRRSTFHNWPTGAAVQPDTLARAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPQCEYLL 207
BLAST of SMED30014301 vs. Ensembl Zebrafish
Match: xiap (X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]) HSP 1 Score: 50.0618 bits (118), Expect = 3.098e-7 Identity = 25/85 (29.41%), Postives = 43/85 (50.59%), Query Frame = 2 Query: 143 ELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAM 397 ++ EE R TF + + + +++A G ++ G + D V C C G LS WE+G+ EH + +S C F + +V N + Sbjct: 133 HMKSEEARLSTFNNWPADSPVRPEDLAEAGMYYIG---IDDNVQCFCCGGGLSGWEQGDDPWSEHAKYYSNCFFFLGHNVGNVPL 214
BLAST of SMED30014301 vs. Ensembl Zebrafish
Match: xiap (X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]) HSP 1 Score: 50.0618 bits (118), Expect = 3.098e-7 Identity = 25/85 (29.41%), Postives = 43/85 (50.59%), Query Frame = 2 Query: 143 ELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAM 397 ++ EE R TF + + + +++A G ++ G + D V C C G LS WE+G+ EH + +S C F + +V N + Sbjct: 133 HMKSEEARLSTFNNWPADSPVRPEDLAEAGMYYIG---IDDNVQCFCCGGGLSGWEQGDDPWSEHAKYYSNCFFFLGHNVGNVPL 214
BLAST of SMED30014301 vs. Ensembl Zebrafish
Match: birc2 (baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]) HSP 1 Score: 48.521 bits (114), Expect = 1.167e-6 Identity = 25/73 (34.25%), Postives = 36/73 (49.32%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPF 364 +R+E++R TF+ N E+A G ++ G D V C C G+L WE G+ A EH R + C F Sbjct: 203 MRREQERLDTFQ-NWTLATVTPAELAKAGLYYLGQG---DRVACFSCGGQLGSWEPGDRAVSEHQRHYPNCRF 271
BLAST of SMED30014301 vs. Ensembl Xenopus
Match: fasn (fatty acid synthase [Source:Xenbase;Acc:XB-GENE-1002983]) HSP 1 Score: 61.2326 bits (147), Expect = 7.875e-11 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQA 394 TGR M Y R+ E+ EE R TF++ ++ KE+A G F++G + D+V C C G+L +WE + A EH + F C F + DV N A Sbjct: 149 TGRVVDMSTPKYP----RHMEMCSEEARLQTFQNWPAYSPLTPKELANAGLFYTG---INDQVKCFCCGGKLMNWEPSDKAWTEHKKHFPECYFVLGRDVGNVA 245
BLAST of SMED30014301 vs. Ensembl Xenopus
Match: crebrf (CREB3 regulatory factor [Source:Xenbase;Acc:XB-GENE-988760]) HSP 1 Score: 54.299 bits (129), Expect = 1.936e-8 Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 2 Query: 140 EELRKEEQRYLTFKD--NKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPF 364 E + EE R +F++ N T E+A GF+F G D+V C C G+L++WE + A EH R F CPF Sbjct: 200 EYMYTEEARLNSFQEWSNMFLT---PAELAKAGFYFVGPG---DKVACFTCDGKLNNWEPNDNAMSEHRRHFPNCPF 270
BLAST of SMED30014301 vs. Ensembl Xenopus
Match: crebrf (CREB3 regulatory factor [Source:Xenbase;Acc:XB-GENE-988760]) HSP 1 Score: 53.9138 bits (128), Expect = 2.431e-8 Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 2 Query: 140 EELRKEEQRYLTFKD--NKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPF 364 E + EE R +F++ N T E+A GF+F G D+V C C G+L++WE + A EH R F CPF Sbjct: 200 EYMYTEEARLNSFQEWSNMFLT---PAELAKAGFYFVGPG---DKVACFTCDGKLNNWEPNDNAMSEHRRHFPNCPF 270
BLAST of SMED30014301 vs. Ensembl Xenopus
Match: crebrf (CREB3 regulatory factor [Source:Xenbase;Acc:XB-GENE-988760]) HSP 1 Score: 53.9138 bits (128), Expect = 2.471e-8 Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 2 Query: 140 EELRKEEQRYLTFKD--NKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPF 364 E + EE R +F++ N T E+A GF+F G D+V C C G+L++WE + A EH R F CPF Sbjct: 164 EYMYTEEARLNSFQEWSNMFLT---PAELAKAGFYFVGPG---DKVACFTCDGKLNNWEPNDNAMSEHRRHFPNCPF 234
BLAST of SMED30014301 vs. Ensembl Xenopus
Match: asrgl1 (asparaginase like 1 [Source:Xenbase;Acc:XB-GENE-989502]) HSP 1 Score: 53.5286 bits (127), Expect = 4.173e-8 Identity = 28/90 (31.11%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 122 QRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQ 391 QR +R E EE R +F+D + Q +++A GF+F+G + D V C C G L +W++ + +EH + F C F +I +++ Sbjct: 160 QRDLR--EYVTEEARLHSFRDWPFYARIQPDKLSAAGFYFTG---IRDTVQCFSCAGCLGNWDENDDPWKEHAKWFPECNFLTSIKTQDE 244
BLAST of SMED30014301 vs. Ensembl Mouse
Match: Xiap (X-linked inhibitor of apoptosis [Source:MGI Symbol;Acc:MGI:107572]) HSP 1 Score: 53.5286 bits (127), Expect = 2.895e-8 Identity = 31/106 (29.25%), Postives = 54/106 (50.94%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY R + EE R +F++ + +E+A+ G +++G D+V C C G+L +WE + A EH R F C F + N++VR+++ Sbjct: 143 TGQVVDISDTIYP----RNPAMCSEEARLKSFQNWPDYAHLTPRELASAGLYYTGAD---DQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNVNVRSES 241
BLAST of SMED30014301 vs. Ensembl Mouse
Match: Xiap (X-linked inhibitor of apoptosis [Source:MGI Symbol;Acc:MGI:107572]) HSP 1 Score: 53.5286 bits (127), Expect = 2.895e-8 Identity = 31/106 (29.25%), Postives = 54/106 (50.94%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY R + EE R +F++ + +E+A+ G +++G D+V C C G+L +WE + A EH R F C F + N++VR+++ Sbjct: 143 TGQVVDISDTIYP----RNPAMCSEEARLKSFQNWPDYAHLTPRELASAGLYYTGAD---DQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNVNVRSES 241
BLAST of SMED30014301 vs. Ensembl Mouse
Match: Xiap (X-linked inhibitor of apoptosis [Source:MGI Symbol;Acc:MGI:107572]) HSP 1 Score: 53.5286 bits (127), Expect = 2.895e-8 Identity = 31/106 (29.25%), Postives = 54/106 (50.94%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY R + EE R +F++ + +E+A+ G +++G D+V C C G+L +WE + A EH R F C F + N++VR+++ Sbjct: 143 TGQVVDISDTIYP----RNPAMCSEEARLKSFQNWPDYAHLTPRELASAGLYYTGAD---DQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNVNVRSES 241
BLAST of SMED30014301 vs. Ensembl Mouse
Match: Xiap (X-linked inhibitor of apoptosis [Source:MGI Symbol;Acc:MGI:107572]) HSP 1 Score: 53.5286 bits (127), Expect = 2.895e-8 Identity = 31/106 (29.25%), Postives = 54/106 (50.94%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY R + EE R +F++ + +E+A+ G +++G D+V C C G+L +WE + A EH R F C F + N++VR+++ Sbjct: 143 TGQVVDISDTIYP----RNPAMCSEEARLKSFQNWPDYAHLTPRELASAGLYYTGAD---DQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNVNVRSES 241
BLAST of SMED30014301 vs. Ensembl Mouse
Match: Birc7 (baculoviral IAP repeat-containing 7 (livin) [Source:MGI Symbol;Acc:MGI:2676458]) HSP 1 Score: 51.2174 bits (121), Expect = 1.124e-7 Identity = 28/84 (33.33%), Postives = 41/84 (48.81%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 + E+ E+ R +F D Q + +AA GFF +G D+V C +C G L WE+G+ EH R F C F + R+ Sbjct: 87 FPEMDSEDLRLASFYDWPSTAGIQPEPLAAAGFFHTGQQ---DKVRCFFCYGGLQSWERGDDPWTEHARWFPRCQFLLRSKGRD 167
BLAST of SMED30014301 vs. UniProt/SwissProt
Match: sp|Q5BKL8|XIAP_XENTR (E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis OX=8364 GN=xiap PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.172e-10 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQA 394 TGR M Y R+ E+ EE R TF++ ++ KE+A G F++G + D+V C C G+L +WE + A EH + F C F + DV N A Sbjct: 149 TGRVVDMSTPKYP----RHMEMCSEEARLQTFQNWPAYSPLTPKELANAGLFYTG---INDQVKCFCCGGKLMNWEPSDKAWTEHKKHFPECYFVLGRDVGNVA 245
BLAST of SMED30014301 vs. UniProt/SwissProt
Match: sp|A5D8Q0|XIAP_XENLA (E3 ubiquitin-protein ligase XIAP OS=Xenopus laevis OX=8355 GN=xiap PE=2 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 2.498e-9 Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 TGR M K Y R+ + EE R TF++ ++ KE+A G F++G + D+V C C G+L +WE + A EH + F C F + DV N Sbjct: 153 TGRVVDMSKPKYP----RHMAMCSEEARLQTFQNWPGYSPLMPKELANAGLFYTG---INDQVKCFCCGGKLMNWEPSDRAWTEHKKHFPECYFVLGRDVGN 247
BLAST of SMED30014301 vs. UniProt/SwissProt
Match: sp|Q9R0I6|XIAP_RAT (E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus OX=10116 GN=Xiap PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 3.532e-8 Identity = 32/106 (30.19%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 83 TGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRI--NIDVRNQA 394 TG+ + IY R + EE R TF++ + +E+A+ G +++G + D+V C C G+L +WE + A EH R F C F + N++VR+++ Sbjct: 143 TGQVVDISDTIYP----RNPAMCSEEARLKTFQNWPDYAHLSPRELASAGLYYTG---IDDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNVNVRSES 241
BLAST of SMED30014301 vs. UniProt/SwissProt
Match: sp|Q8JHV9|BIR7A_XENLA (Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis OX=8355 GN=birc7-a PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 4.772e-8 Identity = 24/80 (30.00%), Postives = 43/80 (53.75%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINI 376 Y E+ +E R +F++ ++ + +A GFF++G D V C +C G L +WE+G+ EH + F C F +++ Sbjct: 139 YPEMAEERDRLDSFRNWPMYAHGNPEHLAGSGFFYTGHR---DNVKCFHCDGGLRNWEQGDDPWTEHAKWFPMCDFLLHV 215
BLAST of SMED30014301 vs. UniProt/SwissProt
Match: sp|O62640|PIAP_PIG (Putative inhibitor of apoptosis OS=Sus scrofa OX=9823 GN=PIAP PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 4.843e-8 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRIN 373 + E+ R LTF+ + T ++A GF++ G D V C C G+LS+WE + A EHLR F CPF N Sbjct: 1 MNTEKDRLLTFQMWPL-TFLSPADLAKAGFYYIGPG---DRVACFACGGKLSNWEPKDDAMTEHLRHFPNCPFLGN 72
BLAST of SMED30014301 vs. TrEMBL
Match: C3Z9S3 (RING-type domain-containing protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_224204 PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.469e-9 Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 2 Query: 149 RKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 + E++R ++ + Q +E+A GFF++G+ D V C CQG L +WE G+ A EH R FS+CPF +N +V N Sbjct: 1 KSEQRRVDSYVTWPAWAPLQPRELAKAGFFYTGSD---DRVQCFCCQGILRNWEAGDRAMNEHRRHFSSCPFVLNFNVGN 77
BLAST of SMED30014301 vs. TrEMBL
Match: A0A1S3H002 (baculoviral IAP repeat-containing protein 7-like OS=Lingula unguis OX=7574 GN=LOC106150804 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.037e-8 Identity = 30/81 (37.04%), Postives = 45/81 (55.56%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 +R E R TF + + +++A GFF+ GT D V C +C+G L +WE G+ +EH R STCPF + ++V N Sbjct: 83 MRNESDRLATFVNWPSGASVRPRDLARAGFFYVGTE---DRVQCAFCEGVLRNWEPGDQPMQEHRRYLSTCPFVLGLEVGN 160
BLAST of SMED30014301 vs. TrEMBL
Match: A0A1S3KI49 (baculoviral IAP repeat-containing protein 3-like OS=Lingula unguis OX=7574 GN=LOC106181906 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.471e-8 Identity = 32/108 (29.63%), Postives = 53/108 (49.07%), Query Frame = 2 Query: 143 ELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAM-----NRLEGLRQSEIDSDEKGG 451 E++ E R TF + + ++A GFF++G D V C +C G L +W+ G+ +EH F TC + + +DV N A+ N +++S + S GG Sbjct: 396 EMKSEAARLRTFAHWPISAHVRPHDLAKAGFFYTGNA---DSVQCAFCSGILRNWDPGDRPMQEHRHHFPTCLYALGVDVGNIALEPDQANLPSAIQESLVTSSAAGG 500
BLAST of SMED30014301 vs. TrEMBL
Match: A0A1I8G104 (RING-type domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.564e-8 Identity = 36/109 (33.03%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 74 FDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFK-DNKVFTDRQ---SKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 +DT+G P + + ++ ++R+EE R+ +F + FT ++AA GFF+ + D V C +C+G L WE GE + H R FSTCPF + ++V N Sbjct: 38 WDTSGMPASIPQHLW--------DMRREENRWQSFHLPDASFTAAHLVSVTDLAADGFFYL---QESDRVKCAFCKGVLKDWEAGEQVREAHRRHFSTCPFVLFVEVGN 135
BLAST of SMED30014301 vs. TrEMBL
Match: A0A1S3HHF5 (uncharacterized protein LOC106155253 OS=Lingula unguis OX=7574 GN=LOC106155253 PE=4 SV=2) HSP 1 Score: 63.1586 bits (152), Expect = 2.724e-8 Identity = 31/81 (38.27%), Postives = 45/81 (55.56%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 +R E R TF + + K++A GFF+ GT D V C +C+G L +WE G+ +EH R STCPF + ++V N Sbjct: 746 MRNESDRLATFVSWPSGANVRPKDLARAGFFYLGTE---DRVQCAFCEGVLRNWELGDQPLQEHRRYLSTCPFILGLEVGN 823
BLAST of SMED30014301 vs. Ensembl Cavefish
Match: ENSAMXT00000038426.1 (pep primary_assembly:Astyanax_mexicanus-2.0:24:10402057:10402371:-1 gene:ENSAMXG00000033609.1 transcript:ENSAMXT00000038426.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.7582 bits (125), Expect = 2.828e-9 Identity = 26/84 (30.95%), Postives = 38/84 (45.24%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAM 397 +R EE R TF + + Q ++ G F+ P D V C C G L W++G+ EH + + C F + DV N M Sbjct: 1 MRSEEARLRTFSNWPSSSPVQPNDLVGAGLFYVPKPTRNDLVQCFCCGGMLKAWKEGDVPWSEHSKIYPNCFFILGHDVGNILM 84
BLAST of SMED30014301 vs. Ensembl Cavefish
Match: birc7 (baculoviral IAP repeat-containing protein 7 [Source:NCBI gene;Acc:103036970]) HSP 1 Score: 54.299 bits (129), Expect = 9.138e-9 Identity = 32/113 (28.32%), Postives = 51/113 (45.13%), Query Frame = 2 Query: 119 SQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEK 457 S + Y E+ E+ R TF++ Q +A GFF++G D V C +C G L +WE G+ +EH + F C + + R N ++QS + E G + Sbjct: 150 SVGQAVYPEMEAEDTRLTTFQNWPPGASVQPDTLAQAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEYLLQTRGREYVNN----IQQSHFNMSEMSGSQ 255 HSP 2 Score: 48.1358 bits (113), Expect = 1.049e-6 Identity = 27/81 (33.33%), Postives = 37/81 (45.68%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 + EE+R +F+ + ++A GF+F G D V C C G L W G+ REH R F TC F + V N Sbjct: 44 MHSEEERLRSFEHWATDSPVSPTDLARAGFYFLG---YGDTVQCFCCDGVLRCWVSGDEPLREHKRHFPTCGFILGRSVGN 121
BLAST of SMED30014301 vs. Ensembl Cavefish
Match: birc7 (baculoviral IAP repeat-containing protein 7 [Source:NCBI gene;Acc:103036970]) HSP 1 Score: 54.299 bits (129), Expect = 1.018e-8 Identity = 31/107 (28.97%), Postives = 49/107 (45.79%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEK 457 Y E+ E+ R TF++ Q +A GFF++G D V C +C G L +WE G+ +EH + F C + + R N ++QS + E G + Sbjct: 156 YPEMEAEDTRLTTFQNWPPGASVQPDTLAQAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEYLLQTRGREYVNN----IQQSHFNMSEMSGSQ 255 HSP 2 Score: 48.521 bits (114), Expect = 8.261e-7 Identity = 27/81 (33.33%), Postives = 37/81 (45.68%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 + EE+R +F+ + ++A GF+F G D V C C G L W G+ REH R F TC F + V N Sbjct: 44 MHSEEERLRSFEHWATDSPVSPTDLARAGFYFLG---YGDTVQCFCCDGVLRCWVSGDEPLREHKRHFPTCGFILGRSVGN 121
BLAST of SMED30014301 vs. Ensembl Cavefish
Match: birc7 (baculoviral IAP repeat-containing protein 7 [Source:NCBI gene;Acc:103036970]) HSP 1 Score: 53.9138 bits (128), Expect = 1.240e-8 Identity = 31/107 (28.97%), Postives = 49/107 (45.79%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEK 457 Y E+ E+ R TF++ Q +A GFF++G D V C +C G L +WE G+ +EH + F C + + R N ++QS + E G + Sbjct: 156 YPEMEAEDTRLTTFQNWPPGASVQPDTLAQAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEYLLQTRGREYVNN----IQQSHFNMSEMSGSQ 255 HSP 2 Score: 48.521 bits (114), Expect = 1.004e-6 Identity = 27/81 (33.33%), Postives = 37/81 (45.68%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 + EE+R +F+ + ++A GF+F G D V C C G L W G+ REH R F TC F + V N Sbjct: 44 MHSEEERLRSFEHWATDSPVSPTDLARAGFYFLG---YGDTVQCFCCDGVLRCWVSGDEPLREHKRHFPTCGFILGRSVGN 121
BLAST of SMED30014301 vs. Ensembl Cavefish
Match: birc7 (baculoviral IAP repeat-containing protein 7 [Source:NCBI gene;Acc:103036970]) HSP 1 Score: 53.9138 bits (128), Expect = 1.350e-8 Identity = 31/107 (28.97%), Postives = 49/107 (45.79%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEK 457 Y E+ E+ R TF++ Q +A GFF++G D V C +C G L +WE G+ +EH + F C + + R N ++QS + E G + Sbjct: 156 YPEMEAEDTRLTTFQNWPPGASVQPDTLAQAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEYLLQTRGREYVNN----IQQSHFNMSEMSGSQ 255 HSP 2 Score: 48.521 bits (114), Expect = 9.475e-7 Identity = 27/81 (33.33%), Postives = 37/81 (45.68%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 + EE+R +F+ + ++A GF+F G D V C C G L W G+ REH R F TC F + V N Sbjct: 44 MHSEEERLRSFEHWATDSPVSPTDLARAGFYFLG---YGDTVQCFCCDGVLRCWVSGDEPLREHKRHFPTCGFILGRSVGN 121
BLAST of SMED30014301 vs. Ensembl Sea Lamprey
Match: birc2 (baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]) HSP 1 Score: 51.6026 bits (122), Expect = 1.752e-8 Identity = 25/74 (33.78%), Postives = 37/74 (50.00%), Query Frame = 2 Query: 143 ELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPF 364 E+ E R L+F + + ++A G ++ G D V C YC G + WE+G+ +EH R FSTC F Sbjct: 162 EMCVEANRLLSFSTWPESSPVRPADLARAGLYYVGPN---DRVACFYCSGVMRDWEEGDVPAKEHERHFSTCAF 232 HSP 2 Score: 46.9802 bits (110), Expect = 7.500e-7 Identity = 18/51 (35.29%), Postives = 32/51 (62.75%), Query Frame = 2 Query: 212 KEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPF 364 +++A GFF++G D+V C C+G + +W+ G++A +HL+ F C F Sbjct: 47 RDLAKAGFFYTGKE---DKVECFSCKGVIGNWKSGDSAIAKHLQSFPNCTF 94
BLAST of SMED30014301 vs. Ensembl Medaka
Match: ENSORLT00000012200.2 (baculoviral IAP repeat containing 7 [Source:NCBI gene;Acc:101164308]) HSP 1 Score: 54.6842 bits (130), Expect = 7.966e-9 Identity = 27/79 (34.18%), Postives = 40/79 (50.63%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRIN 373 Y E+ E+ R TF + Q +A+ GFF++G D V C +C G L +WE G+ +EH + F C F I+ Sbjct: 93 YPEMEAEDSRLTTFHNWPSEASIQPDALASAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEFLIH 168
BLAST of SMED30014301 vs. Ensembl Medaka
Match: ENSORLT00000039931.1 (baculoviral IAP repeat containing 7 [Source:NCBI gene;Acc:101164308]) HSP 1 Score: 54.6842 bits (130), Expect = 7.966e-9 Identity = 27/79 (34.18%), Postives = 40/79 (50.63%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRIN 373 Y E+ E+ R TF + Q +A+ GFF++G D V C +C G L +WE G+ +EH + F C F I+ Sbjct: 93 YPEMEAEDSRLTTFHNWPSEASIQPDALASAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEFLIH 168
BLAST of SMED30014301 vs. Ensembl Medaka
Match: ENSORLT00000034629.1 (baculoviral IAP repeat containing 7 [Source:NCBI gene;Acc:101164308]) HSP 1 Score: 54.299 bits (129), Expect = 1.063e-8 Identity = 27/79 (34.18%), Postives = 40/79 (50.63%), Query Frame = 2 Query: 137 YEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRIN 373 Y E+ E+ R TF + Q +A+ GFF++G D V C +C G L +WE G+ +EH + F C F I+ Sbjct: 129 YPEMEAEDSRLTTFHNWPSEASIQPDALASAGFFYTGHG---DNVKCFFCDGGLRNWEPGDDPWQEHAKWFPRCEFLIH 204 HSP 2 Score: 53.5286 bits (127), Expect = 2.107e-8 Identity = 28/81 (34.57%), Postives = 41/81 (50.62%), Query Frame = 2 Query: 146 LRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRN 388 +R+E +R TF++ S+++A GF+F G+ D+V C C G L HW G+ EH R F C F + V N Sbjct: 17 MRRERERLQTFQNWPDEAPVTSEDLAKAGFYFLGSE---DKVRCFCCGGILRHWADGDCPTAEHSRHFPNCKFILGQAVGN 94
BLAST of SMED30014301 vs. Ensembl Medaka
Match: xiap (E3 ubiquitin-protein ligase XIAP [Source:NCBI gene;Acc:101166883]) HSP 1 Score: 53.1434 bits (126), Expect = 2.167e-8 Identity = 31/105 (29.52%), Postives = 49/105 (46.67%), Query Frame = 2 Query: 98 KMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEG 412 + R ++ R ++ EE R TF + +++A G F+ G D+V C C G+LS W+ G+T EH + FS C + + DV N + R G Sbjct: 122 RTRAIVDETPYPRNRNMKSEEARLETFSSWPRSAPVRPRDLAQAGLFYLGKE---DKVECFSCGGKLSGWKPGDTPWNEHEKHFSHCFYILGHDVGNVPLERDGG 223
BLAST of SMED30014301 vs. Ensembl Medaka
Match: xiap (E3 ubiquitin-protein ligase XIAP [Source:NCBI gene;Acc:101166883]) HSP 1 Score: 53.1434 bits (126), Expect = 2.314e-8 Identity = 31/105 (29.52%), Postives = 49/105 (46.67%), Query Frame = 2 Query: 98 KMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEG 412 + R ++ R ++ EE R TF + +++A G F+ G D+V C C G+LS W+ G+T EH + FS C + + DV N + R G Sbjct: 123 RTRAIVDETPYPRNRNMKSEEARLETFSSWPRSAPVRPRDLAQAGLFYLGKE---DKVECFSCGGKLSGWKPGDTPWNEHEKHFSHCFYILGHDVGNVPLERDGG 224
BLAST of SMED30014301 vs. Planmine SMEST
Match: SMESG000074160.1 (SMESG000074160.1) HSP 1 Score: 367.081 bits (941), Expect = 9.450e-118 Identity = 173/180 (96.11%), Postives = 177/180 (98.33%), Query Frame = 2 Query: 2 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEKRITIIKSFEDPAELIWEKETINRTFEER 541 RLWKKPEEEE+IKTL IAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDV NQA+NRLEGLRQSEIDSDEKGGEK+ITIIK+FEDP ELIWEKETINRTFEER Sbjct: 4592 RLWKKPEEEERIKTLAIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVGNQAINRLEGLRQSEIDSDEKGGEKKITIIKNFEDPTELIWEKETINRTFEER 4771
BLAST of SMED30014301 vs. Planmine SMEST
Match: SMESG000012882.1 (SMESG000012882.1) HSP 1 Score: 343.199 bits (879), Expect = 2.144e-109 Identity = 173/180 (96.11%), Postives = 177/180 (98.33%), Query Frame = 2 Query: 2 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEKRITIIKSFEDPAELIWEKETINRTFEER 541 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQR+VRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDV NQA+NRLEGLRQSE+D DEKGGEK+ITIIK FEDPAELIWEKETINRTFEER Sbjct: 3132 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRKVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVGNQAINRLEGLRQSELDKDEKGGEKKITIIKGFEDPAELIWEKETINRTFEER 3311
BLAST of SMED30014301 vs. Planmine SMEST
Match: SMESG000023758.1 (SMESG000023758.1) HSP 1 Score: 320.857 bits (821), Expect = 1.507e-101 Identity = 153/180 (85.00%), Postives = 165/180 (91.67%), Query Frame = 2 Query: 2 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEKRITIIKSFEDPAELIWEKETINRTFEER 541 RLWKKPEEEEK+ TL AI +Y +D RP ++ K IYSQ RVR EELRKEEQRYLTFKDNKVFTDRQSKEMAA+GF+F+GTPELPDEVTCIYC+G+L+ WEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEK+ITIIKSFEDPAELIWEKETINRTFEER Sbjct: 4052 RLWKKPEEEEKVNTLAAAIIYYKDYDGIRRPTRIIKAIYSQMRVRDEELRKEEQRYLTFKDNKVFTDRQSKEMAAEGFYFTGTPELPDEVTCIYCKGKLAKWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEKKITIIKSFEDPAELIWEKETINRTFEER 4231
BLAST of SMED30014301 vs. Planmine SMEST
Match: SMESG000073574.1 (SMESG000073574.1) HSP 1 Score: 315.464 bits (807), Expect = 8.363e-100 Identity = 150/180 (83.33%), Postives = 165/180 (91.67%), Query Frame = 2 Query: 2 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEKRITIIKSFEDPAELIWEKETINRTFEER 541 RLWKKPEEEEK+ TL AI +Y +D T RP ++ K IYSQ RVR EELRKEEQRYLTFKDNKVFT+RQS+EMAAQGF+F+GTPELPDEVTCIYC+G+L+ WEKGETAKREHLRKF TCPFRINIDVRNQAMNRLEG+RQSEIDSDEKGGEK+ITIIK+FEDPAELIWEKETINRTFEER Sbjct: 1521 RLWKKPEEEEKVNTLAAAIIYYKDYDGTRRPTQVIKAIYSQMRVRDEELRKEEQRYLTFKDNKVFTERQSQEMAAQGFYFTGTPELPDEVTCIYCKGKLAKWEKGETAKREHLRKFPTCPFRINIDVRNQAMNRLEGIRQSEIDSDEKGGEKKITIIKNFEDPAELIWEKETINRTFEER 1700
BLAST of SMED30014301 vs. Planmine SMEST
Match: SMESG000066529.1 (SMESG000066529.1) HSP 1 Score: 303.523 bits (776), Expect = 1.511e-95 Identity = 144/180 (80.00%), Postives = 160/180 (88.89%), Query Frame = 2 Query: 2 RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRKEEQRYLTFKDNKVFTDRQSKEMAAQGFFFSGTPELPDEVTCIYCQGRLSHWEKGETAKREHLRKFSTCPFRINIDVRNQAMNRLEGLRQSEIDSDEKGGEKRITIIKSFEDPAELIWEKETINRTFEER 541 RLWKKPEEEEK+ TL +I +Y +D T RP ++ K IYSQRRV+ EELRKEEQRYLTFKDNKVFT+RQS+EMAAQGF+F+GTPELPDEVTCIYC+G+L+ WEKGETAKREHLRKF TCPFRINIDVRNQAMNR EGLRQSE+D DEKGGEK+ITIIK FEDP EL WEKETI RTFEER Sbjct: 3849 RLWKKPEEEEKVNTLAASIIYYKDYDGTRRPTQIIKAIYSQRRVKDEELRKEEQRYLTFKDNKVFTERQSQEMAAQGFYFTGTPELPDEVTCIYCKGKLAKWEKGETAKREHLRKFPTCPFRINIDVRNQAMNRSEGLRQSELDKDEKGGEKKITIIKGFEDPTELKWEKETIKRTFEER 4028 The following BLAST results are available for this feature:
BLAST of SMED30014301 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30014301 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30014301 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of SMED30014301 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30014301 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30014301 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30014301 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30014301 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30014301 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30014301 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of SMED30014301 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30014301 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30014301 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30014301 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30014301 ID=SMED30014301|Name=SMED30014301|organism=Schmidtea mediterranea sexual|type=transcript|length=541bpback to top protein sequence of SMED30014301-orf-1 >SMED30014301-orf-1 ID=SMED30014301-orf-1|Name=SMED30014301-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=180bp RLWKKPEEEEKIKTLVIAIQHYTSFDTTGRPWKMRKVIYSQRRVRYEELRback to top Annotated Terms
The following terms have been associated with this transcript:
|