Peptidase S1 S6 chymotrypsin Hap active site isoform 2

Overview
NamePeptidase S1 S6 chymotrypsin Hap active site isoform 2
Smed IDSMED30014193
Length (bp)818
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 (SMED30014193) t-SNE clustered cells

Violin plots show distribution of expression levels for Peptidase S1 S6 chymotrypsin Hap active site isoform 2 (SMED30014193) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 (SMED30014193) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Peptidase S1 S6 chymotrypsin Hap active site isoform 2 (SMED30014193) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30014193

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30014193h1SMcG0005003 dd_Smed_v4_15903_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30014193h1SMcG0005003 dd_Smed_v4_15903_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30014193h1SMcG0005003 dd_Smed_v4_15903_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30014193h1SMcG0005003 dd_Smed_v4_15903_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30014193h1SMcG0005003 dd_Smed_v6_15903_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
body wall musculatureSMED30014193h1SMcG0005003 dd_Smed_v4_15903_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. TrEMBL
Match: A0A4E0RRR4 (Uncharacterized protein OS=Fasciola hepatica OX=6192 GN=D915_000407 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.863e-28
Identity = 54/115 (46.96%), Postives = 78/115 (67.83%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            ++I NEHKSKCL + E+ AE C   +   I E + A+ N+S    +S  EYY  ++  L+ YECK+L  KL+CLY +LH+ C P+AV L++NYF ETLP  C ++Y+++LQK ID
Sbjct:  125 LRILNEHKSKCLARQEKVAEQCNVHRNDTIREVVAALQNQSSRLSTSSNEYYGLMRNTLSHYECKSLLAKLECLYAVLHTTCPPNAVRLVMNYFKETLPDGCTFNYEVRLQKHID 239
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. TrEMBL
Match: A0A183A5F8 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS2193 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.658e-27
Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            ++I NEHK+KCL + E+ AE C   +   I E + A+ N+S    +S  EYY  ++  L+ YECK+L  KL+CLY +LH+ C PDAV L++NYF ETLP  C ++Y+ +LQ  ID
Sbjct:   91 LRILNEHKTKCLARQEKVAEQCNVHRNDTIREVVAALQNQSSQLSTSSNEYYGLMRKTLSHYECKSLLAKLECLYAVLHNTCPPDAVRLVMNYFKETLPDGCTFNYESRLQSHID 205
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. TrEMBL
Match: G7YX00 (Uncharacterized protein OS=Clonorchis sinensis OX=79923 GN=CLF_112788 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.180e-26
Identity = 46/108 (42.59%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:  331 IFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQL 654
            +F EH++KCLL+ E+ +E C   +   I E + A+ N S +  +   EYY +++A L +YEC+ ++ KL+CL+ LL++ C PDA+ LI+NYF ETLP  C +HY+ +L
Sbjct:   22 VFREHQNKCLLKKEKASEQCTVVRNHTIREVVTALQNMSASVSAGSSEYYRSVQATLARYECRTIRSKLECLFNLLYTACPPDALRLIMNYFKETLPEGCTFHYENRL 129
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. TrEMBL
Match: A0A094ZUI5 (Uncharacterized protein OS=Schistosoma haematobium OX=6185 GN=MS3_06253 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.985e-25
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            ++I  EH+ +CL Q E+ AE C   +   I E ++A+ N+S    SS  EYY+ IK  L  YECK+L+ KLDCLY +LH+ C  +AV LI+NYF ETLP  C ++Y+ +L K ++
Sbjct:  100 LRILREHQYRCLKQQEKLAEQCAVHRNETIKEVVLALHNQSSRLLSSPNEYYSIIKHTLTSYECKSLRTKLDCLYNILHNACPSNAVRLIMNYFKETLPDGCTFNYETRLSKHLE 214
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. TrEMBL
Match: A0A430Q9H6 (Uncharacterized protein OS=Schistosoma bovis OX=6184 GN=DC041_0002792 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.061e-25
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            ++I  EH+ +CL Q E+ AE C   +   I E ++A+ N+S    SS  EYY+ IK  L  YECK+L+ KLDCLY +LH+ C  +AV LI+NYF ETLP  C ++Y+ +L K ++
Sbjct:   63 LRILREHQYRCLKQQEKLAEQCAVHRNETIKEVVLALHNQSSRLLSSPNEYYSIIKHTLTSYECKSLRTKLDCLYNILHNACPSNAVRLIMNYFKETLPDGCTFNYETRLSKHLE 177
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Planmine SMEST
Match: SMESG000038428.1 (SMESG000038428.1)

HSP 1 Score: 228.794 bits (582), Expect = 1.339e-76
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            ++IFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKL CLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID
Sbjct:  116 LRIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLGCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 230

HSP 2 Score: 76.6406 bits (187), Expect = 1.339e-76
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:  708 YPFFERYKNDNSSVKMVKISIAIIFMNLGFLNLLEML 818
            YPFFERYKNDNSSVKMVKISIAIIFMNLGFLNLLEML
Sbjct:  244 YPFFERYKNDNSSVKMVKISIAIIFMNLGFLNLLEML 280
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Planmine SMEST
Match: SMESG000060842.1 (SMESG000060842.1)

HSP 1 Score: 188.734 bits (478), Expect = 1.271e-64
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 1 
Query:  391 MKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            MKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKL CLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID
Sbjct:    1 MKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLGCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 93

HSP 2 Score: 76.6406 bits (187), Expect = 1.271e-64
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:  708 YPFFERYKNDNSSVKMVKISIAIIFMNLGFLNLLEML 818
            YPFFERYKNDNSSVKMVKISIAIIFMNLGFLNLLEML
Sbjct:  107 YPFFERYKNDNSSVKMVKISIAIIFMNLGFLNLLEML 143
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Planmine SMEST
Match: SMESG000060842.1 (SMESG000060842.1)

HSP 1 Score: 189.504 bits (480), Expect = 8.371e-60
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 1 
Query:  391 MKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            MKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKL CLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID
Sbjct:    1 MKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLGCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 93
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Planmine SMEST
Match: SMESG000000812.1 (SMESG000000812.1)

HSP 1 Score: 114.005 bits (284), Expect = 9.562e-30
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            +Q+F  HK +CL+Q E  A  C K K++ I E I A++N+SQ   S   +Y   +K ILN YECK LK +L CLY +LH  C P+AV LIL YF E LPSNC Y Y+  L  +I+
Sbjct:  120 LQVFYTHKDRCLVQQETAANQCAKLKSATIEEAIKALANESQNLHSGHYQYSNYVKKILNNYECKGLKRQLKCLYNILHINCHPNAVHLILGYFREILPSNCEYVYEPMLTNYIN 234
[Close]
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Planmine SMEST
Match: SMESG000000812.1 (SMESG000000812.1)

HSP 1 Score: 114.005 bits (284), Expect = 1.116e-29
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 1 
Query:  325 VQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNKSQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLILNYFIETLPSNCYYHYQIQLQKFID 669
            +Q+F  HK +CL+Q E  A  C K K++ I E I A++N+SQ   S   +Y   +K ILN YECK LK +L CLY +LH  C P+AV LIL YF E LPSNC Y Y+  L  +I+
Sbjct:  121 LQVFYTHKDRCLVQQETAANQCAKLKSATIEEAIKALANESQNLHSGHYQYSNYVKKILNNYECKGLKRQLKCLYNILHINCHPNAVHLILGYFREILPSNCEYVYEPMLTNYIN 235
The following BLAST results are available for this feature:
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E0RRR44.863e-2846.96Uncharacterized protein OS=Fasciola hepatica OX=61... [more]
A0A183A5F82.658e-2746.09Uncharacterized protein OS=Echinostoma caproni OX=... [more]
G7YX006.180e-2642.59Uncharacterized protein OS=Clonorchis sinensis OX=... [more]
A0A094ZUI51.985e-2545.22Uncharacterized protein OS=Schistosoma haematobium... [more]
A0A430Q9H62.061e-2545.22Uncharacterized protein OS=Schistosoma bovis OX=61... [more]
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Peptidase S1 S6 chymotrypsin Hap active site isoform 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000038428.11.339e-7697.39SMESG000038428.1[more]
SMESG000060842.11.271e-6498.92SMESG000060842.1[more]
SMESG000060842.18.371e-6098.92SMESG000060842.1[more]
SMESG000000812.19.562e-3048.70SMESG000000812.1[more]
SMESG000000812.11.116e-2948.70SMESG000000812.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30014193 ID=SMED30014193|Name=Peptidase S1 S6 chymotrypsin Hap active site isoform 2|organism=Schmidtea mediterranea sexual|type=transcript|length=818bp
GGTAATTTCATAATTATAATTAATAATAAAATATAATTGTTTTTTCAATT
TTATTAATAATATCCCAATAAAATTGACAATGAATAAGTTGGAGAGTTTA
GAATTCCTGAAACTTGGATACGACGTAGGGCAACTTCTTTCCCCGAAATA
CGCTTTTGATCCATGAAACTTTTATTTCAAGAGTTTTATATGCAACAAAT
TATGAGTCGTATATTTTCGACAAAAGAATTTATGAATATTTTATTTATTC
GATGACCGATTCCTTATCGAGTCCTTGATATTCAGAGGTCCAGTATGTCA
GTTTCTATAGGGATTTTATTAACTGTTCAAATATTCAACGAGCACAAATC
CAAATGTCTGTTACAGAATGAACGAGAGGCTGAGTCGTGCATGAAATTTA
AAGCTTCTGCAATAAATGAAACCATCATGGCAATAAGTAACAAATCTCAA
ACATCGTTTTCCAGCCAAGAGGAATATTATGCTAATATTAAAGCGATTTT
GAATAAATATGAATGCAAGGCATTGAAAATGAAGCTAGATTGTTTGTACG
AGCTGTTACACAGCCGGTGTTCTCCTGATGCTGTCACTCTTATTCTCAAC
TATTTTATTGAAACTTTACCCTCGAACTGCTATTACCATTATCAAATTCA
ACTTCAAAAATTCATCGACTCCTTGAAAATCAAGTCCATCCATTCGACGA
TTTCTCATATCCTTTTTTCGAACGATATAAGAATGACAATAGTTCAGTAA
AAATGGTAAAAATATCGATAGCTATTATTTTTATGAATTTGGGGTTTTTG
AATTTGTTAGAAATGTTG
back to top

protein sequence of SMED30014193-orf-1

>SMED30014193-orf-1 ID=SMED30014193-orf-1|Name=SMED30014193-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=152bp
MSVSIGILLTVQIFNEHKSKCLLQNEREAESCMKFKASAINETIMAISNK
SQTSFSSQEEYYANIKAILNKYECKALKMKLDCLYELLHSRCSPDAVTLI
LNYFIETLPSNCYYHYQIQLQKFIDSLKIKSIHSTISHILFSNDIRMTIV
Q*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000240body wall musculature
PLANA:0000418head
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane