Protocadherin-9
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30014036 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Protocadherin-9 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 179.489 bits (454), Expect = 3.611e-45 Identity = 184/645 (28.53%), Postives = 298/645 (46.20%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L + N + P+ + K+N S DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 163 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPPI---FNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFDREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSN--------VSFDREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDVD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 760 HSP 2 Score: 103.99 bits (258), Expect = 1.017e-21 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 88.9669 bits (219), Expect = 3.457e-17 Identity = 127/500 (25.40%), Postives = 212/500 (42.40%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ DRE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D D GEN VT S+ + + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDADAGENKAVTLSILNDN----DNFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVD 706 HSP 4 Score: 75.0998 bits (183), Expect = 6.199e-13 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 127 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 392
BLAST of Protocadherin-9 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 179.874 bits (455), Expect = 3.766e-45 Identity = 184/645 (28.53%), Postives = 298/645 (46.20%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L + N + P+ + K+N F DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 163 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPPI---FNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFDREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSF--------DREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDVD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 760 HSP 2 Score: 103.99 bits (258), Expect = 1.005e-21 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 89.3521 bits (220), Expect = 2.794e-17 Identity = 127/500 (25.40%), Postives = 212/500 (42.40%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ DRE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D D GEN VT S+ + + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDADAGENKAVTLSILNDN----DNFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVD 706 HSP 4 Score: 75.8702 bits (185), Expect = 4.446e-13 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 127 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 392
BLAST of Protocadherin-9 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 179.489 bits (454), Expect = 4.597e-45 Identity = 184/645 (28.53%), Postives = 298/645 (46.20%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L + N + P+ + K+N F DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 163 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPP---IFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFDREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSF--------DREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDVD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 760 HSP 2 Score: 103.99 bits (258), Expect = 1.098e-21 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 89.3521 bits (220), Expect = 3.116e-17 Identity = 127/500 (25.40%), Postives = 212/500 (42.40%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ DRE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D D GEN VT S+ + + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDADAGENKAVTLSILNDN----DNFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVD 706 HSP 4 Score: 75.8702 bits (185), Expect = 4.387e-13 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 127 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 392
BLAST of Protocadherin-9 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 179.489 bits (454), Expect = 4.941e-45 Identity = 184/645 (28.53%), Postives = 298/645 (46.20%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L + N + P+ + K+N F DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 163 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPP---IFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFDREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSF--------DREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDVD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 760 HSP 2 Score: 103.605 bits (257), Expect = 1.227e-21 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 89.3521 bits (220), Expect = 3.322e-17 Identity = 127/500 (25.40%), Postives = 212/500 (42.40%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ DRE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D D GEN VT S+ + + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDADAGENKAVTLSILNDN----DNFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVD 706 HSP 4 Score: 75.485 bits (184), Expect = 4.975e-13 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 127 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 392
BLAST of Protocadherin-9 vs. Ensembl Human
Match: PCDHA12 (protocadherin alpha 12 [Source:HGNC Symbol;Acc:HGNC:8666]) HSP 1 Score: 177.178 bits (448), Expect = 5.445e-45 Identity = 176/670 (26.27%), Postives = 304/670 (45.37%), Query Frame = 1
Query: 268 DLKKLIPQTKMTYHLLKSSKAHSYFT---IKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLN-SVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL-EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTPS----ILENTKPGTVVFKIIAQDKDEGENGRVTFSM-----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF------TSSHMIFTIMENNM-KNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVID 2205
+L +L+P+ +SK H ++N LF N+ +D + +C EC + I D + + + + ++ P+F ER ++ +SES + L A+D D G N + TY +S E +F L + + S+ EL + K LDRE T K + LM IDGG+ + TGS+ I I ++D NDN P F P YK + E + N R+++L+A+DPDEG+NG+I Y + FSIN D+GEI + LD+E+ ++ V A++ P + V + VL+V D E+ V L + + E+ + +A+++V+ +++ + C L H L+S +YK + + + +DRE +S L + D PS ++A++ + + D NDNAP F P + EN PG +F + A D D +N V++S+ + A S Y+S+ G + +D E + L V+A D G+ P +++ + + + D NDN P ++ + ++ ++ V ++ D D + L + A+ + ++TTR LD P+ V+ D G P + T TV V +++
Sbjct: 55 ELAELVPRL-----FRVASKRHGDLLEVNLQNGILFVNSRIDREKLCGRSAECSIHLEVIVDRPLQVFHVDVEVKDINDNP------------PVFREREQKVPVSESAPLDSHFPLEGASDADIGVNSLLTYALSLNE------NFELKIKTKKDKSILPELVLRKLLDREQTPKLNLLLMVIDGGKP-ELTGSVQIQITVLDVNDNGPAFDKPSYKVVLSENVQNDTRVIQLNASDPDEGLNGEISYGIKMILPVSEKCM--FSINPDTGEIRIYGELDFEENNAYEIQVNAIDKGIPS----MAGHSMVLVEVLDVNDNVPEVMVTSL---SLPVQEDAQVGTVIALISVSDRDSGANGQVICSLTPHVP--FKLVS----TYK-NYYSLVLDSALDRE---SVSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPA---FAQPEYTVFVKENNPPGCHIFTVSAWDADAQKNALVSYSLVERRVGEHALSS--YVSVHAESGKVYALQPLDHE----ELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATPAGSAGGAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAVGAHIPFHVGLYTGEISTTRILDEADAPRHRLLVLVKDH-GEPALTSTATVLVSLVE 671 HSP 2 Score: 97.8265 bits (242), Expect = 5.066e-20 Identity = 148/619 (23.91%), Postives = 262/619 (42.33%), Query Frame = 1
Query: 820 TDQKTGSINIAIRIIDENDNMPQF-----------SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYK------FDPRFKTGALILDYFSINEDSG---EIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH-FQEILSLISKGDESYKVKSFEIRTNQEIDREK--IPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDI----NLVLRSKNP-AMLPFV-ILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQ--DQTSEFNT-IEYHLESESD----VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKS--SVQVNVVIDASTAKSNS 2550
D+ ++ + + D NDN P F S+P+ F EG A+D D G+N + Y F+ + KT +D E+ L+K LD E+ ++ ++ P T + ++I+VL+V D N + +Y +V ++ + + + D + + + + IL + K S + EIR E+D E+ +I N ++D +PS + ++++ D NDN P +T P + E+ + GTV+ I D+D G NG+V S+ + +S + + + S +D ES + +VVTA D G ++S+ + DVNDN P F + ENN + + D D + +LV R A+ +V + ++ +++ L + LD E+ FQV A D+ G P T+ V V+D+NDN P ++ +A +S L PR+ V A + D S +N + Y L+ + F + G I T R + ++D H + + V + G ++ S +V V++V + K++S
Sbjct: 110 VDRPLQVFHVDVEVKDINDNPPVFREREQKVPVSESAPLDSHFPLEG----------ASDADIGVNSLLTYALSLNENFELKIKT----------KKDKSILPELVLRKLLDREQTPKLNLLLMVIDGGKPE----LTGSVQIQITVLDVND-----NGPAFDKPSYKVVLSENVQNDTRVIQLNASDPD--EGLNGEISYGIKMILPVSEKCMFSINPDTGEIRIYGELDFEENNAYEIQVN-----AIDKGIPSMAGHSMVLVEVLDVNDNVPEVMVTSLSLP-VQEDAQVGTVIALISVSDRDSGANGQVICSLTPHV--PFKLVSTYKNYYSLVLDSALDRES----VSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQKNALVSYSLVERRVGEHALSSYVSVHAESGKVYAL---QPLDHEELELLQFQVSARDA-GVPPLGSNVTLQVFVLDENDNAPALLATPAGSAG-GAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAVGAHIPFHVGLYTGEISTTRILDEADAPRHRLLVLVKDHGEPALTSTATVLVSLVENGQAPKTSS 680
BLAST of Protocadherin-9 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 126.331 bits (316), Expect = 6.531e-29 Identity = 178/698 (25.50%), Postives = 295/698 (42.26%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQE------ILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDH-GIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD-----VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFN 2571
PIF + + EI E IG T+ A D D G N Y + + L +N+ + ++ PLDRET + D++A D G T ++ + + I ++D NDN P F+S Y + E + I + ATD D G NGK+ Y G L +DY +GE+ L++ +D + P+ AV +ST PL INV +N+ +++ K +T +EN R+ E I+ +G E + + S I+T + +DRE + S + + D PS +S I +++KD NDNAPT Y T I E G+ + + A D DE + ++T+ +E++ L IG+ ++ V + Q + + ++ATD G++ + +++ I DVN + P F I E++ V ++ ED D D+ +V + F I + I + + LDRE F+ V A+D P N+ T ++V + D NDN P F S + A IS P F+ VSA D D ++Y L S +F +DR GT+ ++ + V+ I + G S+ ++ ++ + + S N+P E +
Sbjct: 268 PIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKN---------LLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKG-TPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDY-----STGEVTLRERIDAKNS-----PITAVIRAKDGAQPALSSTV------------PLTINVIDINDHAPTLIAAQK--------MITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTAR---DMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVT--ISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVFSILDIGDQGAILSVSGELK-----RQDHKVRVEISATDQGGLQGRCV---VNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF--FRIDPSSGDI---SVSSDLDREDRATFSVIVTASDHASPPLNTST-QIEVILDDINDNSP--QFTSSSYAA--TISEDIPVGTSFLQVSAIDAD-IGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTL--SDVNDNAPTFEQLS 896 HSP 2 Score: 119.398 bits (298), Expect = 1.010e-26 Identity = 178/700 (25.43%), Postives = 301/700 (43.00%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAI----DGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHF-QEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG----TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHD----DINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDID---RQEGT--IFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNI 2574
P+F + + I E++ I I ATD+DFG N K+ H+ + + + +T++ + RE + + + A+ DG Q + ++ + I +ID ND+ P + ++E + + R+ A D D G NG I Y + + F I+EDSG I K LD E + V A + P +L TST ++ + + ++ D N + K Y++ + I+T+ + +ND + I R+E +E+ S++ GD+ + + E+ R+ K+ I + D + + I D N +AP YF + I E++ G V + A+D D G+N R+ +S++ S F I + G I V S +D E T +++VTA+DH P +T QI + + D+NDN P+FTSS TI E+ + ++ D D+ D L S +P++ F + + + L + LDRE+ + A D G P+ S + + + D NDN P Q + ++ I+ P T+ A D D+ + I + + +D +FDI+ Q G I TR E D K F +S + S V V I S N P +++F I
Sbjct: 373 PVFASDSYNVTILENITIPAVIATVKATDEDFGTNG----KV----------HYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGS--------EDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTP---SLNTST-TIAVVLKDIND-----NAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAI-----LSVSGELKRQD-HKVRVEI---SATDQGGLQGRCVVNVFIDDVN-SAP---YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF-----FRIDPSSGDISVSSDLDREDR----ATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGT---LRVSSKLDREQFAVIVLPIFARDR-GTPSLSAASEITLTLSDVNDNAPTF---EQLSYDLY-IAENSPVGSTVGTIVARDADEGDNAD-ISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEF---DYEAKANKF-FFELQASSGQLSSTVPVRIHVSDVNDNKPALKDFVI 1005 HSP 3 Score: 102.449 bits (254), Expect = 1.628e-21 Identity = 97/372 (26.08%), Postives = 168/372 (45.16%), Query Frame = 1
Query: 1417 SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
S EIR + +DRE + K + E VD + S+S + + + D DN+P +YFG I E+ GT V + A+D D GENG + +S+ + +L L+I GVI+ + +D E+ + + + V A+D G + + + IT+ DVNDN P F S TI+EN + + ++ D+D + + + + + + + + + +D + P VI P S T + + VID ND+ P +I + ++ E + V A D+D I+Y +E D F ID G I T + + + + +K+T + G S+ +S + VV+
Sbjct: 219 SGEIRLAKSMDREVLDKHILKVTAYERVDPTI-SASTTVVVHVLDVQDNSPIFEKDSYFG--EIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNL--LAINAKSGVIQTAAPLDRET----LSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTG--EVTLRERIDAKNSPI--TAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGE----EVGRVYAIDEDSGPN-GIIKYSMEGSED-FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVL 571
BLAST of Protocadherin-9 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 120.168 bits (300), Expect = 5.927e-27 Identity = 178/700 (25.43%), Postives = 301/700 (43.00%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAI----DGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHF-QEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG----TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHD----DINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDID---RQEGT--IFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNI 2574
P+F + + I E++ I I ATD+DFG N K+ H+ + + + +T++ + RE + + + A+ DG Q + ++ + I +ID ND+ P + ++E + + R+ A D D G NG I Y + + F I+EDSG I K LD E + V A + P +L TST ++ + + ++ D N + K Y++ + I+T+ + +ND + I R+E +E+ S++ GD+ + + E+ R+ K+ I + D + + I D N +AP YF + I E++ G V + A+D D G+N R+ +S++ S F I + G I V S +D E T +++VTA+DH P +T QI + + D+NDN P+FTSS TI E+ + ++ D D+ D L S +P++ F + + + L + LDRE+ + A D G P+ S + + + D NDN P Q + ++ I+ P T+ A D D+ + I + + +D +FDI+ Q G I TR E D K F +S + S V V I S N P +++F I
Sbjct: 14 PVFASDSYNVTILENITIPAVIATVKATDEDFGTNG----KV----------HYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGS--------EDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTP---SLNTST-TIAVVLKDIND-----NAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAI-----LSVSGELKRQD-HKVRVEI---SATDQGGLQGRCVVNVFIDDVN-SAP---YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF-----FRIDPSSGDISVSSDLDREDR----ATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGT---LRVSSKLDREQFAVIVLPIFARDR-GTPSLSAASEITLTLSDVNDNAPTF---EQLSYDLY-IAENSPVGSTVGTIVARDADEGDNAD-ISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEF---DYEAKANKF-FFELQASSGQLSSTVPVRIHVSDVNDNKPALKDFVI 646 HSP 2 Score: 104.76 bits (260), Expect = 2.731e-22 Identity = 149/595 (25.04%), Postives = 251/595 (42.18%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQE------ILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDH-GIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD-----VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFN 2571
+ I ++D NDN P F+S Y + E + I + ATD D G NGK+ Y G L +DY +GE+ L++ +D + P+ AV +ST PL INV +N+ +++ K +T +EN R+ E I+ +G E + + S I+T + +DRE + S + + D PS +S I +++KD NDNAPT Y +I E G+ + + A D DE + ++T+ +E++ L IG+ ++ V + Q + + ++ATD G++ + +++ I DVN + P F I E++ V ++ ED D D+ +V + F I + I + + LDRE F+ V A+D P N+ T ++V + D NDN P F S + A IS P F+ VSA D D ++Y L S +F +DR GT+ ++ + V+ I + G S+ ++ ++ + + S N+P E +
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDY-----STGEVTLRERIDAKNS-----PITAVIRAKDGAQPALSSTV------------PLTINVIDINDHAPTLIAAQK--------MITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTAR---DMGTPSLNTSTTIAVVLKDINDNAPTFDKKEY--NVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVFSILDIGDQGAILSVSGELK-----RQDHKVRVEISATDQGGLQGRCV---VNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF--FRIDPSSGDI---SVSSDLDREDRATFSVIVTASDHASPPLNTST-QIEVILDDINDNSP--QFTSSSYAA--TISEDIPVGTSFLQVSAIDAD-IGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTL--SDVNDNAPTFEQLS 537
BLAST of Protocadherin-9 vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 112.849 bits (281), Expect = 8.879e-25 Identity = 179/686 (26.09%), Postives = 298/686 (43.44%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKS-NFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENN----------MKNSFVG-----EIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGT--VDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VIDAST 2535
P F ++ +++EISE ++G + LP TD D V + I + +N F+L + +L V LDRE +KY + A DGG+ K G + +I IID NDN P FS Y V ++ ++ + ATD D G N +I Y KT A F+I++ SG I L T V + + +P + +S+A V I+VL +++ +L N + + EN + VA V++ + +R + RL I S ++ + + + +DRE + L ++ D + ++ + I D NDNAP L T+ G+ + A+D D G+NG + +S+ + E +SI + G I V + IDC + + V A D G STDLQ+ + D P+F + I E+ NS G ++++D H ++ M V ++K + D EK + VIAT++ NS T T + + + D NDN+P I +P++ + TV E + VSA+D D + F + YH+ SES F I+ G +F ++ +A+ G + ++ + G S ++S +++ VID T
Sbjct: 120 PSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFVILQG---NVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKP-AKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIK---KTSAPSNSNFAISQ-SGVITTTASL-LPASTHDVIVVASDHGSPSL-----SSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQ----YRDTKLRL-----IGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEK--DGQIIIEHPQL-LTIGDINDNAPQWHSSQIHISLNRTQGGSRT--LTAKDPDLGQNGWIRYSVLDT-----ELVSIDKETGRIFVPNTIDCNIG----SEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVD--------TMSGTVCIQK-----------TFDFEKQKSYQTTVIATNA-----NSETSTSLISIRLKDVNDNWP-IFYPNEYHLTVREGPKPE---EPLLVVSASDMD-SGTFGEVSYHILSESSSFSINPVTGEVFAQKPLAR---GRFHLVVSAKDGGGQSSENSANIHITVIDKDT 736 HSP 2 Score: 109.383 bits (272), Expect = 1.068e-23 Identity = 96/342 (28.07%), Postives = 165/342 (48.25%), Query Frame = 1
Query: 1516 SSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTA 2538
S+ ++ I I+D NDN P + SI E+ K + + A DKD+ +NG V +S+ S+ P + I + G + S++D E++ + V ATD GI P+S+++ + I + DVNDN P+F S ++EN+ + VG++ DKD ++ +V R N + F I +K ++ T RS+DRE + ++A D G P S T + + V+D NDN P + + T V+ P + T+ A D D+ ++ Y + +S +F + + G ++ RR++ SD + + V + G V V I +A
Sbjct: 818 SNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSI-ISSHPG-SSIEIDQFTGQLSTGSLLDYEAT----RNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEY-FGIDEKLGNVY---TKRSIDREVISHVDISIVAEDK-GVPPRSSTASARISVLDVNDNPPSCL-----SITPIVVPAGSPLSTAIGTIVAMDPDKGLN-GSVLYRAQLQSSLF-VVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRISKGSA 1141 HSP 3 Score: 68.9366 bits (167), Expect = 2.631e-11 Identity = 149/659 (22.61%), Postives = 273/659 (41.43%), Query Frame = 1
Query: 595 HTITLPVATDKDFGNNQVETYKISRQEPRTFDNHF-RLNVLNT-LNSVTVEL-KVFKP--LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV----KSFEIR-TNQEIDREKIPKISTNILCKESVDSHVPSS--SAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNS--FVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
H+ + ++ ++ G ++ T K +P N + R +VL+T L S+ E ++F P +D ++ F + A DGG T + + ++D PQF +++ E ++ ++++ A + G + +I Y + ++ +++ SG + ++K D+EKQ ++ VIA N TST+ + I + +V D + Y N + ++ E K + +V+ + ++ F G+ SY + SF I E+ +K L + D SS SA I I + D++ P + E+ PG + + G +V +S+ SI E G I V +D + T L + G +S Q+ I I+D NDN P+F+SS + +I E+ + +V + +DK + ++ + S +P ++ L+T LD E + +V ATD LG P S T+ + V+D NDN P ++ T+ V+ P+ V A D+D + E I Y + + S+ F ID + G ++T+R + + I I I + G S+ + +
Sbjct: 442 HSSQIHISLNRTQGGSRTLTAK----DPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALST-DLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQD-------EHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANS------ETSTSLISIRLKDVND---NWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTF-------------------GEVSYHILSESSSFSINPVTGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSV-------GAMSKVKYSIYSGD--QDHNFSIDEDTGKIYVTRYLDAD---VHDTVLLNIQATLPSG---ESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSS----IEIDQFTGQLSTGSLLDYEATRNYKLRVKATD-LGIPPRSSNMTLFIHVLDVNDNAPEF---EKSWYTMEVLENSPPKTI-VGKVVARDKD-SLENGQIVYRITNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISV 1035 HSP 4 Score: 65.0846 bits (157), Expect = 3.814e-10 Identity = 99/405 (24.44%), Postives = 174/405 (42.96%), Query Frame = 1
Query: 718 TLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF--SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDE---PLEINVDYLNNKNYSIVEEN-KSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKG-DESYKVKSFE-IRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFT 1908
++NS T + V PLDRE + ++ ++ DGG + S + + + D+NDN PQ S+P E + + R A+D D G NGK ++ + + LD ++G++ L++ + +K + V+ P LY ++EIS N E PLE +L S ++E F+A +Q L S++ D ++ V S IRTN E+DRE + + S ++ S ++++ + + NDN P+ + EN + G+ V + A+D D R F + S+ + + +I + G I + + +D E T+ + ATD T ++I + D+NDN P F+
Sbjct: 1674 SINSTTGSISVL-PLDREASQEHLLIIILTDGGS---RNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFEL---LEDSSGSLDLVP---ETGDLVLRRLSSLQS---WKIKLRVVDHGVP---GLYVE-KNLEISNRNPQTEAKAPLE----FLKQTYLSTIDEGLPRGQFIA-------------KLQPELAGL--TYSIVEGNIDSAFSVDSEGVIRTNLELDREILERYSLKVIGTGSGQQ----IGTRVDVRVNNLNDNVPSFPMSKPRRVPENLRVGSYVATVGAKDVDNLAPLRY-FLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEV----LPEHTLTIKATDGSF---DTFTNLTIFVSDINDNAPTFS 2030 HSP 5 Score: 62.7734 bits (151), Expect = 1.976e-9 Identity = 121/532 (22.74%), Postives = 230/532 (43.23%), Query Frame = 1
Query: 1042 YFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYS--IVEENKSNFF-----VAIVTVTSKEN---DLFRSIQCRLEHFQEILSLIS-KGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIE--IIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFT----IMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVE------VIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHV-IKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIE 2562
+ ++E SGEI LDYEK++ KF ++AV + S +++I V E++ + N +++ +V+ S F A+ TVT + D+ R + + + + L S K +E + ++ N ++DRE K L E+ D P+ ++ I I D NDNAP + T S+ N G+ + + A D D GEN R+++ ++K++ PS +I ++ +I +SL +T ++V A+DHG S+ ++IT+ + P ++ + +MEN+ S V + + + + L+ S A+ P ++ L LDRE + + + + G + +E + D NDN P +++ +H+ L T++A D D + I Y + ++++ ID++ G IF + +IG + ++ + G ++ + +Q VV D +S P+ E
Sbjct: 68 FLKVDERSGEISTIAHLDYEKRS--KFDIVAVK--------VEESGETIDILV--------EVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFVILQ-GNVNNVFKLASRKVNEQLQA---DLVVNGQLDREFRDKYE---LLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQS-------GVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSS---ALCP--QQTDQAHVYLLLLCGILDRETASEHHLKFLLEKD---------GQIIIEHPQLLTIGDINDN-----APQWHSSQIHI--SLNRTQGGSRTLTAKDPD-LGQNGWIRYSV-LDTELVSIDKETGRIFVPNTI-DCNIGSEIKFRVRAEDGGSPALSTDLQ--VVADLLDTESKPPQFE 541 HSP 6 Score: 61.6178 bits (148), Expect = 3.687e-9 Identity = 103/434 (23.73%), Postives = 182/434 (41.94%), Query Frame = 1
Query: 661 ISRQEPRTFDNHFRLNVLNTLNSVTVE----LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTF-------------FKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF 1905
+S +E R F H+R+ +++ L V P+DRE + F + + T QK + ++DENDN+P F+S Y +K+ + + +I ++ A+D D G NG++ Y R +G L+ ++N D+G I L + D + F P A V++ + + + S VL VY+ V L + + V + A + + + L S++ EH +G VK+ E+ +D E P IS + D + S+ ++I+++ ++ AP T T I +T G V ++ A D+D G +G V +S+ + I E G+I+++ + +L T I V A K T + + I DV ++PK
Sbjct: 2153 LSGEESREF--HYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKV-QCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSY----RILSGN-DLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYE------VHVLEDTSVGTVLQK----IRASNRLGMRNDGLLYSLK---EH---------QGKLGIDVKTGELTLKTHLDWESEPIISMYLSVS---DGNGRSAVVPLKIVVEPVDEFAPVFTKSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSISDRQ----STVKIEEHTGIIRLQKPLVSRRNL---TIEQITVVAYSSPTKQSKTTVYLEIGPFDVQPSLPKL 2546 HSP 7 Score: 59.3066 bits (142), Expect = 2.204e-8 Identity = 72/291 (24.74%), Postives = 121/291 (41.58%), Query Frame = 1
Query: 1531 IEIIIKDQNDNAPTLT--YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVN-DNVPKFTSSHMIFTIMENNMKNSFVGEIEVED-KDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIII----FPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDV 2379
+ I + D NDNAPT + + T PG KI A D D G +T+S+ + S + G + +K + + VTATD+G+ ST + +S+ I + + P F + F +MEN+ +G + E+ ++ H R ++P + K R+F +DRE+ FQV D+ + V V V+D+NDN P+ + S ++ H K + A+DQD + E + Y + S +D+
Sbjct: 2015 LTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA--RGALTYSLGQG---SSSIFRVAPESGALFMKVLPPAGERY------LVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEESREFH------YRIQDPEASKIFSIDKFGRLF---VAGPIDREQRATHEFQV-EIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAH--------GQKIGQIMASDQD-SGENGRVSYRILSGNDL 2275 HSP 8 Score: 56.225 bits (134), Expect = 1.625e-7 Identity = 95/409 (23.23%), Postives = 167/409 (40.83%), Query Frame = 1
Query: 721 LNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR--ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLK-KPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFR-SIQ-------CRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGT-PSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKST--DLQISITIQDVNDNVPKF 1905
++ T + + PLD E +++ + A DG D T N+ I + D NDN P FS P+Y+ V S ++ A D D G + Y G F + +SG +++K P E+ + V A + P + + SV +SV+ EP + + ++E +K + I ++ +E+ F IQ ++ F + E F++ EID E + S + CK +I+ D+NDN P T S+ ++ G + +I+A D+D GENGRV++ + L +++ G I++ D + T I+V A DHG ++ +Q+S+ + + + P F
Sbjct: 1977 IDQFTGTIHLTAPLDFEVLPEHTLTIKATDG-SFDTFT---NLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA--RGALTYSL------GQGSSSIFRVAPESGALFMKVLPPAGER---YLVTVTATDNGVP------SFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSK--IGLQIGNLSGEESREFHYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQV----EIDNEMM--TSQKVQCK-------------CHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGN--DLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFF 2341
BLAST of Protocadherin-9 vs. Ensembl Celegans
Match: cdh-4 (Cadherin-4 [Source:UniProtKB/TrEMBL;Acc:A0A1C3NSI5]) HSP 1 Score: 108.227 bits (269), Expect = 2.473e-23 Identity = 144/534 (26.97%), Postives = 242/534 (45.32%), Query Frame = 1
Query: 742 LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEF-VKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKK-PLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVY---------DEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQE-----------ILSLISKGDESYKV--KSFEIRTNQEIDR---EKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPT---LTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIF 2235
L+V ++R + Y+F ++A G ++K +++I I+D ND+ P FS+ ++ + G ++++ ATD DEG NGKI+YKF T L L+ IN ++GEI L + P +K + V A++ P++ +S LN+ +P I + NK+ + F IV VT E+ ++ +L+ E I + E V +S EI ++ + EK+ + + ++D+ P SS +++ IKD N+++P ++Y+ I EN KPG +FK+ A D D G NG++ FS+ EKS+ +SI G++K+ +D E T + A+D G + + ++I+++DVNDN PK H I E+ +FV + D+D+ + L N +PF I + IF LD K P FN + D G+P S + + VE++D N I F
Sbjct: 445 LRVSAKINR-SERVYNFKVIASLHG-INEKLAEKDVSIEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVKVDATDQDEGENGKIVYKF-----TSELPLE---INANTGEITLVEVP---KKGNSWPATVWAIDLGLPLS----------RMSALNLMFYKNGTKIPAKPKPIIIQESENKHSPVFSS-----FPEIVEVT--EDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEVLDVQLKVS-AIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVSYY--LRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSV-----ISIDAKTGIVKLLKSLDREDQDVH----TFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFL-LNSEKVPFRIDHHSGCIFIHAPEYPLDYHKTPFFNLSIEVADH-GDPILSTSCHLHVELVDIAHNHLAIEF 934 HSP 2 Score: 82.4185 bits (202), Expect = 2.117e-15 Identity = 139/590 (23.56%), Postives = 261/590 (44.24%), Query Frame = 1
Query: 733 TVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPD-----EGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFP-VIAVNPTPPVTITLYTSTASVEISVL---NVYDEPLEINVDYLNNK-NYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV----KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL---RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDI 2442
T ++ + LD E T KY L+A G+ Q + + I D ND MP+F S + + + I +SATD D + + K++YK +T F+I+ +GE+ L +P++ + V+ V+ VT ++T+ A + + +L ++ P Y+ N +IV NKS A++TV K +Q L S SK E++ V K+ I ++ ++ + + ++ +++ S+ + + + D ND P L ++ T SI E+ K G V + A D DE N + +S+ + ++ S+ G I V ++ ++ + TL++ + ATD P + + I + VP+F++SH +F++ME+ + +G ++ + ++ D+I + ++ + LPF + + +I SLDRE+ ++ + A D+ G +++T TV V++ D NDN P + IS SA D+D S I + L E+ FD++ G + ++ + I
Sbjct: 2235 TGDVTITGQLDYEKTQKYDLKLVATSSGK--QVSSEAEFIVLIEDVNDEMPEFIRSDVSAKISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKIVDGDET------LFNISPATGELSLARPVEQDDLVNEDTKKVLNVS----VTDGMFTAYAKLVVEILRSGSMQPPPRFEQSHYVANALENTIV--NKS----ALLTVAVKGG--VPPLQFSLAPTTSSNSSTSK--EAWPVAIDRKTGRIHVSRVLNYHRDKRYQIPLVVEDATGRRAFST---LTLSVIDINDKPPFFVLPFYST-SISESAKEGDTVMMVSATDDDE--NDTIEYSLLDGS--ESQFFSVHPRQGTITVAKKLEHKAGV----TLSLTIKATDSANPPHHATTTVEVNIASESVKVPRFSNSHYLFSVMEDADVGNVIGRVQQMETEI-DEIRFTIVPGSEESDSFLPFSVERSTGKII---VKSSLDRERKNQWKMTIRA-DAAGG-VHAIT-TVTVDIGDVNDNAPAF----HGDYERFTISEDAAVGTSVTIFSAMDRDD-SPSGRIRFSLVEENPYFDLNENSGWLTVASQLDREKI 2778 HSP 3 Score: 77.411 bits (189), Expect = 7.066e-14 Identity = 66/243 (27.16%), Postives = 117/243 (48.15%), Query Frame = 1
Query: 1525 AKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD------VHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP 2223
A I + + DQNDNAPT TY + ++E+ G + A D+ E + + ++ S S ++++ G++ + +D E+ + L + V A D G+ P T+ Q+ I++ D NDN PKF + + EN+ V ++ D D V ++ +V + + +LPF I + + ++S+D EK K+N +VIA D G P +++ V D+ND+ P
Sbjct: 3097 ATILVTVIDQNDNAPTFEKSTY--SMKVMESESIGYELAHFRASGGDQNET--IEYYLKPSDVTS--FVNLNAQTGILTLAKPLDFET----LSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLI----SQSIDYEKIKKYNLKVIAKDG-GRPPLRSEALLEIHVEDENDHAP 3324 HSP 4 Score: 72.4034 bits (176), Expect = 2.458e-12 Identity = 83/307 (27.04%), Postives = 137/307 (44.63%), Query Frame = 1
Query: 1504 SHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKP---GTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKS-IIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIF 2412
+ +P+ I II + +N ++P + F P I+E T+ GTVV K+ A D+D G NG + + + A S E L++ E G I V S + + + + V+A D G KS+ + + I+DVN++ P+F I EN + ++ D D ++ + N VI A + + +SLDRE F +IA+D G P + + V D NDN P + ++ + L P ++A D+D + + +++ L SE F ID G IF
Sbjct: 586 TKIPAKPKPI-IIQESENKHSPVFSSF--PEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEVLDVQLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVISIDA-KTGIVKLLKSLDREDQDVHTFAIIASDE-GFPMRVSVTNLTISVEDVNDNPPKCVV---QHSRARIPEDL-PHGAFVSCMAAFDED-IGQNSKLKFLLNSEKVPFRIDHHSGCIF 882 HSP 5 Score: 71.2478 bits (173), Expect = 5.160e-12 Identity = 122/528 (23.11%), Postives = 214/528 (40.53%), Query Frame = 1
Query: 652 TYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-----ILRLSATDPD-EGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSME-----KSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN------TTRSLDREKDPKFNFQVIATDSLGNPTN 2169
T+K+S DN + V+N N + V++K +D E + F + I Q + + I + I + NDN P+ + K + E L + I R+ A D D + I +++ F G L F I++ +G + + KPLD E FF V+A + + A++ ++V++ D N YS+ + + + D +I+ L+ ++ S ++ ++ + + +D E + + ++ K DS VP + A++EI + D+NDNAP Y G + EN+K G V + A D D G V++ +E + P L + ++G + + ID E + + V A D G P ++ + I ++D ND+ P F +M + E + + V D D KN A I + F +N T + L+ K K+ VIA D G T+
Sbjct: 2943 TFKLS-------DNDGNVFVVNFRNGI-VKVKESDQIDYEKNQQLEFHRLTI---QDNSEVCKELITVVIENLNDNRPKIIEKLLKVSIDENLPTSEDARQYITRIVAEDADFDEIKFRMVDDF------GGL----FQIDDINGVVTVVKPLDSEILGFFNLTVVASDGE-------FEDKATILVTVIDQND-----NAPTFEKSTYSMKVMESESIGYELAHFRASGGDQNETIEYYLKP-SDVTSFVN-----LNAQTGILTLAKPLDFETLSALKLTVVAK---DSGVPPLETEAQVEISVMDENDNAPKFEKEKYVG--KVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAI--NSNGDVLISQSIDYE----KIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALVQEGEAIGHRLLKFSVSDLD---------GPKNGAPFTVEIQGDGAKSFKVNEKLELLTAKKLEYRKKDKYLLTVIAKDVKGKTTD 3411 HSP 6 Score: 71.2478 bits (173), Expect = 5.337e-12 Identity = 155/645 (24.03%), Postives = 255/645 (39.53%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPL-DRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTV-------TSKENDLFRS--IQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY---FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIG---------ETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTD-LQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDIN---LVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDID 2391
P+F+ +E++E IG + A D+D G N Y I +H L V +TV + K + ++ + AID G T K+ + +RI D N++ PQF Y + E + I +++A D D G NGKI + + ++I SI+ +G + L K LD E Q F +IA + P+ +++ T SVE +V D P + V + + I E+ FV+ + SK L S + R++H + F +D K P + +I + D + S+S + + + D N + + S+ EN++ GT V I A++ T +K +LEY IG + G ++ ++D E+ A + T+ + TD P+ D L + I I D ND+ P I ++ EN+ N + ++E D D D+ L+ + + F + + + R LDREK + V D G P V V V+D+NDN P +H S K + A D D+ E + Y++ F ID
Sbjct: 606 PVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVI---HDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEVLDVQLKVSAIDAG-TPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVI----SIDAKTGIVKLLKSLDREDQDVHTFAIIASDEGFPMRVSVTNLTISVE----DVNDNPPKCVVQHSRAR---IPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEKVPFRIDHHSGCI--------------FIHAPEYPLDYHKTPFFNLSIEVADHGDP-ILSTSCHLHVELVDIAHNHLAIEFDDVAKEASVYENSEIGTEVIMIEAKE---------TGDEQKVKAENLEYRIIGGDGWPHFSIDQKGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDVLHVFIRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHELWVSICDG-GEPQLCSNVIVIVNVLDENDNSPTF------TQAIHHYSVRSKFAGKLCRIFAVDADE-GENARLTYNITEGDARFSID 1203 HSP 7 Score: 70.0922 bits (170), Expect = 9.791e-12 Identity = 103/400 (25.75%), Postives = 166/400 (41.50%), Query Frame = 1
Query: 733 TVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIY----KEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIA---VNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFR-SIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF 1905
T + V + L+ +Y L+ D T ++ S + + +ID ND P F P Y E KEG ++ +SATD DE N I Y ++ +FS++ G I + K L+++ + A NP T T+ + AS + V P N YL +S++E+ + V E D R +I E L S + + +I +DRE+ + I + H ++ + + I D NDNAP + +I E+ GT V A D+D+ +GR+ FS+ + Y + E G + V S +D E + ++ ATD G +TDL +I + DVND+ P+F
Sbjct: 2456 TGRIHVSRVLNYHRDKRYQIPLVVEDA--TGRRAFS-TLTLSVIDINDKPPFFVLPFYSTSISESAKEGDT---VMMVSATDDDE--NDTIEYSLLDGSES-----QFFSVHPRQGTITVAKKLEHKAGVTLSLTIKATDSANPPHHATTTVEVNIASESVKV------PRFSNSHYL----FSVMEDADVGNVIGRVQQMETEIDEIRFTIVPGSEESDSFLPF------SVERSTGKIIVKSSLDRERKNQWKMTIRADAAGGVHAITT---VTVDIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEEN----PYFDLNENSGWLTVASQLDRE----KIDHYKLIARATDEG--GFNTDLPFTIVVSDVNDSPPQF 2813 HSP 8 Score: 52.7582 bits (125), Expect = 2.115e-6 Identity = 130/587 (22.15%), Postives = 239/587 (40.72%), Query Frame = 1
Query: 781 KYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIY-----KEFVKEGLNSVRIL-RLSATDPDEGING-KIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPS-ILENTKPGTVVFKIIAQDKD-----EGENGRVTFSM---EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKN-SFVGEIEVEDKDVHDDINLV-----LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITV 2469
+++F L+A D G + + I R++D+ P FS +Y KE K+ V+++ + S +G+ G +I+ K P FS++ +GE+ L L +T + F V A T P I + A VEI + + + Y+ ++ ++T+ + +D +I+ L ++I GD + ++D EK K ++ S SS A+ ++I+D ND P + I ++ G + + A D D + E+ ++ + + +++ F +I G + + ++ + + + T + V+ TD G+ L + I P+F SH + +EN + N S + + V+ +L S + P I +K RI + +R L+ +D ++ ++ D+ G S T+ + VID ND P + P + + IS M VSA D D E +TIEY L SES F + ++GTI +++ EH +T+
Sbjct: 2049 EFNFKLIAKDNGSVHRVEEPVKI--RVVDKA--RPVFSQNVYTAVISKESTKKSTVLVKVMAKSSLQSKSKGLIGYRILDKKSP-----------FSVDFLTGEVRLNN-LKMLAETNYTFEVEAREVTRPKMI----AKAQVEI----IVKSGITTHAPVFEKLKYTASTPESTSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGD---------VTITGQLDYEKTQKYDLKLVATSS--GKQVSSEAEFIVLIEDVNDEMPEFIRSDVSAKISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKIVDGDETLF------NISPATGELSLARPVEQDDLVNEDTKKVLNVSVTD-GMFTAYAKLVVEILRSGSMQPPPRFEQSHYVANALENTIVNKSALLTVAVKGGVPPLQFSLAPTTSSNSSTSKEAWPVAIDRKTGRI---HVSRVLNYHRDKRYQIPLVVEDATGRRAFS---TLTLSVIDINDKPPFFVLPFYSTS----ISESAKEGDTVMMVSATDDD---ENDTIEYSLLDGSESQFFSVHPRQGTITVAKKL------EHKAGVTL 2574 HSP 9 Score: 51.9878 bits (123), Expect = 3.878e-6 Identity = 87/375 (23.20%), Postives = 155/375 (41.33%), Query Frame = 1
Query: 1531 IEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSI-------------IDCESSLAQFTTLTIVV--TATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD----------VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQV-IATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHV-ISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL---ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
+ I I D ND+AP + TP ++ KPG V+ K+ A D+DEGENG++ + F S L I G I + + ID L++ + L ++ T KPK +Q + N + P F+S I + E+ + V +++ D+D +HD + S + + + +++ I + L +EK + Q+ ++ G P S T+ + + D N++ P + + ++ IS E V+AND D + I++ L + +S V ID + G + + + + D H I + G+ M+ SV N+ I N P+
Sbjct: 478 VSIEILDSNDHAPVFSAKWMRQTPIVI--GKPGDVLVKVDATDQDEGENGKIVYK-----FTSELPLEINANTGEITLVEVPKKGNSWPATVWAIDLGLPLSRMSALNLMFYKNGTKIPAKPKPIIIQ-----ESENKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHD----IAGSSHEVL---TVDEQSGEITVASDLSKLMKEKLEVLDVQLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQF-----DEVSYYLRISENEKPGKDIFKVTANDFDGGNN-GKIKFSLGNNQEKSSVISIDAKTGIVKLLKSLDREDQDVHTFAIIASDEGF-PMRVSV-TNLTISVEDVNDNPPK 825
BLAST of Protocadherin-9 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 102.834 bits (255), Expect = 1.303e-21 Identity = 181/719 (25.17%), Postives = 297/719 (41.31%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF-SSPIYKEFVKEG----LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALI------LDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFV------AIVTVTSKENDLFRSIQCRLE-HFQEILSLISKGDESYKVKSF--EIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA------KIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGEN----------GRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMK-NSFVGEIEVEDKDVHDDIN-LVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKD---PKFNFQVIATDSLGNPTNSVTGTVDVE--VIDQNDNFPIIIFPSQNNATVHVISYLEPR-------NYKFMTVSAND-QDQTSEFNTIEY-----HLESESDVFDIDRQEGTIFTRREMAK--SDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIE 2562
+G ++ A D D +N TY + ++ L+ +N + E+ + KP+ + T K+ F+++A D G + S + + ++D+ P++ +SP K + LN V ILR A + N +IYK G + F + E+ + + LDYE+ + + A + T V ST + + V +V D + VD +I EE N + IVTV + + D S + E H++ + + + +++ EI N++ DREKI + + S +P ++ K++I+I D NDNAP+ Y G + E+ G V I A D D+ N GR+ F + + G I VK +D E+S +V+ A+D G +T+ + I I+DVNDN P+F T++E ++ + + D D + + +V R + + K + L ++LDR+ P +NF V A D G N + G DV+ V D NDN P IFP + + Y+E FM V A D D T+E IEY L + VF ID+ G IF R + + S E +I++ + G S + NV I + N+P E
Sbjct: 994 VGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK-TQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKV-ILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRV-----ASTKTFVVEVRDVNDVVPQFTVDLFTG---TIDEEMTPNEHLEKTNGKPIVTVKAIDTD---SDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIG--RVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDS-------------GTIFVKEPLDFEAS----DQYHLVLIASD-GRHNATTN--VYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIEL--VKALDRDPPAGVPSWNFVVQAIDDDG---NGLVGYADVQVNVRDINDNSP--IFPER------LFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGF--ANVTIKVTDMNDNAPFFE 1662 HSP 2 Score: 93.9745 bits (232), Expect = 6.014e-19 Identity = 145/594 (24.41%), Postives = 235/594 (39.56%), Query Frame = 1
Query: 760 LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVK--EGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALI---LDYFS-INEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLN------------------VYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKP--------GTVVFKIIAQDKD-EGENGRVTFSMEKSA-FPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIK-------PKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES--DVFDIDRQEGTI 2409
DRET + + A D G G ++ ++D NDN PQF P Y+ V E + + ++ + A D D N +I Y + G LD+F +N SGEI L KP+ + Q F F VIA + P + S+A V ++VL+ DE +E+N L + S + S+ + N + + F + G+E +V E ++++ + +T++ + + S+ + ++D ND P T T +I E P G + + A D D +G V + + A ++ I E G I D E + + V A+D + P ++++ I I DVNDN P F I + E+ + V I+ D D H ++ L +PF + + IF LD E +++ +IA+D N T +V + + D NDN P F Q AT + ++ F V A D DQ + + I Y LE + +VF I + GTI
Sbjct: 937 FDRETRPREDVTVKATDRGDR-PLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGT-SVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI-FNVIADDNGIPEALQ---SSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGN----KAESKFRQFNKF----ENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVA-------STKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDRE----KIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIF---VKEPLDFEASDQYHLVLIASDGRHNATTNVY----IHIEDVNDNAP--QFEQQKYATTVIEEDVDIPKVLF-NVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTI 1495 HSP 3 Score: 84.7297 bits (208), Expect = 3.474e-16 Identity = 103/386 (26.68%), Postives = 170/386 (44.04%), Query Frame = 1
Query: 814 GQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG--LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDY----EKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKEND---LFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS----SSAKIEIIIKDQNDNAPTL----TYFGTPSILEN---TKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKS--IIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF 1905
+ D + +++ IRI D NDN+P F+ P+Y V+E LN IL+++A D D G N +I Y D FSIN + GEI K LD E+ ++F V A + PV++ +S+A + I N DE + +L Y+ + ++ + +++ D + S + + ++L S + + VK + ++ + P T I+ + PS S A + I I+D N+N P Y I+E T P T+V K+ A D D NG + +S+ + S + I GV+ + D E+ + + V ATD G +P Q S+ + D+NDN P+F
Sbjct: 617 AREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQT-ILKVTAVDKDTGDNSRITYSVDNH---------NFSINSN-GEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSL---SSSAMIHIRTENTNDE----SAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIV-KVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPRE----DVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQF 979 HSP 4 Score: 53.5286 bits (127), Expect = 1.343e-6 Identity = 106/476 (22.27%), Postives = 197/476 (41.39%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRE---TTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPI--YKEFVKEGLNS--VRILRLSATDPDEGI--NGKIIYKF-DPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTS-------KENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSF-VGEIEVEDKD 1989
ATD D ++ + + R E + D FR+ S T+EL K LDR+ ++F + AID + G ++ + + D NDN P F + Y E +E ++S V + + A D D+ N I Y + G + F I++++G+I+ + LD E + +F +I V + A+V I V ++ D N + Y E + A+++ ++ K+N + ++F ++ +S + +R Q +D E + + L D + A + + + D+ND+AP + + E+ GT + + A D+D G+ R F + + + P ++ + DG ++V +D E +++ A D+ +++ +QDVNDN P+ + EN N EI D+D
Sbjct: 1461 ATDAD--QDEKSSRIVYRLEGQGADEVFRIGKY----SGTIEL--VKALDRDPPAGVPSWNFVVQAIDD-DGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESV---FRIDQNTGKIFAMRSLDREISSEREF-IIEVRAND-RGVPSREGFANVTIKVTDMND-----NAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYF-----YVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGR-HDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDPKRQFTI--DQDGTLRVAHTLDRED----IAVYNLIIEAYDNSNNIGRQ--MVAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRD 1901
BLAST of Protocadherin-9 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045) HSP 1 Score: 165.236 bits (417), Expect = 1.384e-40 Identity = 179/675 (26.52%), Postives = 302/675 (44.74%), Query Frame = 1
Query: 604 TLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYL-NNKNYSIVEENKSNFFVAIVTVTSKENDL-FRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESS-LAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVI--SYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRRE--MAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNIN 2577
TL A D D + Y I ++ FRL+ + V ++L++ LDRETT YS + A+DGG T G + + I I D NDN P F+ Y V E +L++ A+D D NG + Y + R + F I+ +G IY+ K LD+E + + V+A + P+ +TA V I V +V D INV +L ++ + I E + FVA ++V ++ + ++ L +L ++ + Y V + +DRE + + +++ + D P +S I + I D NDN P +++E PGT V +++A D+DEG N +T+S+ ++ ++ I G+I +S IDCE+ + Q T V A D G+ P S+ + +TI DVNDN P F S ++ EN + ++ D D V+ +N + + F + + I LD E+ + F V+ATD G S T + +++ D NDN P + +P + ++ + + + + V A D D F + Y + + E+ +F IDR G IF R ++ H++ I+ + G +++S+ V + A P E N
Sbjct: 194 TLLPARDLDLEPYNTQRYNIVSG---NVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGG-TPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQM---FRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLE-----TTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVI-----VHLPLDREIVSNYTLSVV---ATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLT-----VVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEIC---IAGELDFERRSSYEFPVLATDRGG---LSTTAMIKMQLTDVNDNRP-VFYPREYKVSLRESPKASSQASSTPIVAVVATDPDY-GNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGG--NLRSNADAVVFLSIIDAMQRPPIFEKARYN 833 HSP 2 Score: 142.51 bits (358), Expect = 1.172e-33 Identity = 158/565 (27.96%), Postives = 259/565 (45.84%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKF-DPRFK------TGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKI--EIIIKDQNDNAPTLT--YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEI------------EVED--KDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLG--NPTNSVTGTVDVEVIDQNDNFP 2223
A DKD G++ TY + ++ + L +++ + L + + LD E++ +++ + A DGG T ++ I + + D NDN P F Y V E + + +I++++A+D D G N +I Y+ D + + + +F I +SG IYL+ PLD E + ++ V+A + P + V + VL+ D + + +K +EEN V V VT+ + DL + R L I+ + + V EI T + +DRE L E+ D P SA++ I + D NDNAP + S+ E PGT V ++ A D+D G+N +T+S+ K L SI T GVI+ + ++D E + + V A+D G P+ T + + + D+NDN P FTSS ++F + E+ VG I VE+ +D+ L +K+ F I + + +L R LDRE +F ++ A D+ NP +S TV +EV D NDN P
Sbjct: 955 AHDKDSGSSGQVTYSLVKESGKG---------LFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLST-NLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAA----HAKTRVIVRVLDANDN----DPKFQKSKYEFRIEENLRRGSVVGV-VTASDLDLGENAAIRYS-----LLPINSSFQVHPVTG-EISTREPLDRELRELYD---LVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEER----SIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSG---NLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAI-TVKIEVADVNDNAP 1483 HSP 3 Score: 130.183 bits (326), Expect = 6.280e-30 Identity = 178/709 (25.11%), Postives = 294/709 (41.47%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG------LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKP--LDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFV--------AIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNI---LCKESVDSHVPSSSAKIEIIIKDQNDNAPTL-TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-------------SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIEN 2565
PIF++ + ++E+ +G I A+D D G N + Y I F+ + S + E+ + LD E + Y F ++A D G + + I +++ D NDN P F YK ++E +S I+ + ATDPD G G++ Y+ + G F I+ +GEI++ +P L Q + A + + + A V +S+++ P I E+ + N++V + +V + D+ R I S G S + S IR + +D E ++ NI L + V H ++ I ++D NDNAP S+ E+ + G ++ A DKD G +G+VT+S+ K + L +I G + + +D ESS T++VTATD G+ ST+L I + +QDVNDN P F + E+ N+ + ++ D D ++ + R S + F I + I+ LDRE ++ V+ATD+ G P V V V+D NDN P Q + I R V+A+D D E I Y L + F + G I TR + + + + + + G T ++S+ +V V I S N+P I +
Sbjct: 609 PIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEG--------FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGL---STTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI-----FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRS----NADAVVFLSIIDAMQRP-------------PIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYS----IYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHT-----QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYESSQRH----TLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIY---LRAPLDRETRDRYQLTVLATDN-GTPAAHAKTRVIVRVLDANDNDPKF----QKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQG-TPVRSA-RVPVRIHVSDVNDNAPEIAD 1258 HSP 4 Score: 124.405 bits (311), Expect = 3.656e-28 Identity = 156/582 (26.80%), Postives = 254/582 (43.64%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQ--TDQKTGSINIAIRIIDENDNMPQFSSP------IYKEFVKEGLNSVRIL-RLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPL-----DYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLE-INVDYLNNKNYSIVEENKSNFFVAIVTVTS---KEN-----DLFRSIQCRLEHFQEILSLIS-KGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSS-------AKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITI--QDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPI 2226
+G I ATD D G N Y++ R P+ ++ + L ++S+T L + PLD E +Y + A+D T++ S+ + +RI+D ND+ P F SP F+ + ++ + A D D G NG++ Y+ TG F IN +G I L K L D EK F + A + P S+ ++ + V ++ P + Y +I+E S FV VT S EN ++ + L H +I+ +G + ++ + D + +S++ + K+ + +S A I I + D NDN+P + +G S+ EN++PG V+ ++A D DEG N + +S+ + SI + G + + + D E Q + T+ + A+D G +PKS +ITI +D NDN P+F S ++ E+ + V +I D D+ + LV N F I ++ I T LDRE +NF V+ATD S T V + V+D NDN PI
Sbjct: 1500 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI-----TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEP---KKSSLNLHLIVQGSHNNPPRFLQAVY----RATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGL-SVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGN--KFSIDSSSGELSARPL-DRE----QHSRYTLQIQASDRG-QPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLI---TTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPI 2056 HSP 5 Score: 121.709 bits (304), Expect = 2.476e-27 Identity = 158/713 (22.16%), Postives = 289/713 (40.53%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE----SYKVKSFEIRTNQ----EIDREKIPKIS---------------------------------------TN--------ILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIF-HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIF--PSQNNATVHVISYLEPR---NYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTI---FTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV 2517
+G ++ A D D G N Y ++ + F + ++ T+ LDRE Y+F ++A DGG+ + ++ ++ + I ++D NDN P F Y V + + +L++ A D D G N +I+Y + + + F IN +G + + L E V+A + P +S+ + L + + P V N+ Y ++ + S ++ V + +D R Q++ G+E S S EIR N+ + DR P +S TN +L + D+ +S A++ I ++D+NDN+P + ++ E GT V ++ A D D G N R+ + + +AF S G+++ ++D E + L I+ ATD G+ + I + I DVNDN P F ++++ T+ E + + I D D + + L +++ + + + +R L R LD E ++ VIA+D+ +T V V D+NDN P+ + P A + IS + ++ +TV+A D D + + Y +E + F + G + +R + A S G++ ++I + G ++KSS + V
Sbjct: 1967 LGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGK----------LDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAE---NSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNP-------PQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRR---------QKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFS-----GIVRTNIVLDRE--IRDIYKLKII--ATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLV-TVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLT----VRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRV 2636 HSP 6 Score: 114.005 bits (284), Expect = 5.372e-25 Identity = 158/629 (25.12%), Postives = 257/629 (40.86%), Query Frame = 1
Query: 601 ITLPVATDKDFGN-NQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKP--LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILD-YFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSL----------EYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIF-HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD-----VFDIDRQEGTIFTR 2418
I VATD D+GN QV ++ E F ++ T E+ V +P L T + ++ A DGG ++ + + IID P F Y +VKE I R + +G + ++ R+ + D YFSI +SG I + KPLD+E ++ + A PPV Y T V I V +V D E + I + + + + D S Q +E KG + +S + +Q +D E + + L + D VPS S + I++ +D NDN P + ++ E+ + ++ A D D G N R+T+ + + ++ ++ I G I +++ +D E+ + V ATD+G ++ + + D NDN PKF S F I EN + S VG + D D+ + N +R ++LP + + + ++T LDRE ++ V A D G P S V + V D NDN P I P ++ +V +P + + V A D+D + +I Y + D +F ID G I TR
Sbjct: 739 IVAVVATDPDYGNFGQVSYRIVAGNEAGIF----------RIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAV-VFLSIIDAMQRPPIFEKARYNYYVKED-----IPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPV----YGHT-QVNIEVEDVNDNAPEFEASMVR-----ISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKES----GKGLFAIDARSGHLILSQHLDYESSQR---HTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETR----DRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGE--NAAIRY---SLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQ-GTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVR---EEQPPGTEVVRVRAVDRDH-GQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTR 1320 HSP 7 Score: 107.457 bits (267), Expect = 6.650e-23 Identity = 172/710 (24.23%), Postives = 300/710 (42.25%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE--GLNSV-----------RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL-EHFQEILSLISKGDESYKVKSFE--IRTNQEIDREKIPK--ISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPS----------ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIK-VKSIIDCESSLAQFTTLTIVVTATDHG-IKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN------TTR-SLDREKDPKFNFQVI-------------------ATDSLGNPTNSV---TGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIE 2562
A D+D G N TY I + R D H ++ T S + +V LD E + Y + A DGG ++T + + + ++D NDN P F+S V+E L V ++R S + E + ++ Y +P K LI F I+ SG + + + LD E Q+ F+ + A++ T + +S +V+I V +V D E D ++ + E + T T + +Q RL +F ++ + +++ S + +D E + + + L + S + +S + + I D ND+AP +F +P+ I + T+ G VV I+A D+D G+NG++T+ E + I G+I+ VKS+ + + +++ A DHG +PK + L + + +Q ++N P+F + TI+EN SFV ++V K +H N L + PA + AN +FH++ TTR DRE + V ++DS+G+ +N T+ + V D NDN P F + + V EP TV A+D D+ + I Y + + + F ID G + + R + + + ++I + G + N+ I N+PR +
Sbjct: 1281 AVDRDHGQNASITYSIVKG--RDSDGHGLFSIDPT--SGVIRTRVV--LDHEERSIYRLGVAASDGGNPPRETVRM-LRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDL--RVTYTLNPLTKD--LIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTT--ASNNPQSSAITVKIEVADVNDNAPEWPQDPID---LQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAP---HFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTY--EITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFV--LQVTAKSLHGAENANLSYEIPAGV-------ANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSP--EFRPGSCYGLSVPENSEPG--VIHTVVASDLDEGPNADLI-YSITGGNLGNKFSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQG-HCNITIFVEDQNDNAPRFK 1953 HSP 8 Score: 90.5077 bits (223), Expect = 8.486e-18 Identity = 139/637 (21.82%), Postives = 254/637 (39.87%), Query Frame = 1
Query: 586 KIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPL--DRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTIT-------------------LYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKEN---DLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHG-IKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLV--LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTI 2409
+IG + VA D+D G+N TY+I+ + FR +N+ + +K P D E +++ + A D GQ + K S+N+ + + ++N P+F +Y+ + E + S +L+++A N + Y+ + D F ++ G I + D E Q + PV + T++ + A++ I+V +V D E + S+ E ++ +V E DL SI + S+ S E + + +DRE+ + + I + I I ++DQNDNAP T S+ E+ GT V +I A D D G N R+ +S+ A + +I G+I +D E + +V ATD G + +S + + I + D+NDN P F I + + +++ D D+ + +V L ++N A+ + + L+ ++SL E + +V+A D GNP S G +++ + + P++ F QN ++ P + + V A D + + +E + +D G I
Sbjct: 1622 RIGEVVAHIVAVDEDSGDNGQLTYEITGGNG---EGRFR---INSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEI-----PAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPG--SCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG--GNLGNKFSIDSSSGE---------LSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSL---ANETQWQFAIDGQSGLITTVGKLDRELQ----ASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGA--LSASQSLASESGKLLHLEVVARDK-GNPPQSSLGLIELLIGEAPQGTPVLRF--QNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEI 2222 HSP 9 Score: 83.1889 bits (204), Expect = 1.589e-15 Identity = 121/549 (22.04%), Postives = 234/549 (42.62%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL--EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL------TYFGT-PSILENTKPGTVVFKII---AQDKD-EGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGT-----VDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNT-IEYHLESESD--VFDIDRQEGTIFTRREM 2427
+ I + DENDN P+FS + V EG N + ++ A D D G N ++ Y A +++ SG + LD E + +K +IA + P T TA++ + +++V D N N V E + I ++++ + D + ++ RL E +I ++ + Y S ++ + +D E + +++ ++ + + + + D+NDNAP YF P+I E ++ +V F ++ A D D EG N +V + +E P+ E S+ ++GV+ V ++ + +++ + + A D G + + + D +F + I E S V +++ + + ++ ++ A F +L+ + + LDRE++ + +++ + G P S + V + ++D NDNFPI ++ A IS L P Y + A D DQ + N+ + Y + S +D +F ID G +F +
Sbjct: 2308 LVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIE----PAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQM----TGTATIRVQIVDVND-----NQPTFPPNNLVTVSE-ATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRY---SGKLVLKRRLDYELQQEYELDVIASDAAHE----ARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIE----PAQEGFSVHPSNGVVSV-NMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVV--LQLGQDALDQSLAIIAGNEESA---FELLQSKAIVL----VKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAE---ISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRL 2818 HSP 10 Score: 78.9518 bits (193), Expect = 2.993e-14 Identity = 147/560 (26.25%), Postives = 224/560 (40.00%), Query Frame = 1
Query: 721 LNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKP----LDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEEN----KSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYF-----GTPSILENTKPGTVVFKIIAQDKD---EGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLP------FVILKKANRIFHLNTTRS-LDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
++ T E++ LDRET YS + + G +I + + + DENDN P F + ++ EF + V+ L A D D Y A L S E G +YL LD E + + A++ TPP+ +V I++ +V D N ++ ++ V EN S V + EN L R + +E + I ++ I N+ +D E ++ K+ + + ++A + I + D NDN PT+ +P I E+ +PG V +I D D E N VT + F ++ D I + I+ + T+ V ATD G P I + I DVNDN P+F +ME + V ++ D+D + +N L + + A P F I + I TTRS +D E +P V+A D G P S T TV V + D NDN PI Q+ V V EP + VSA+D D
Sbjct: 125 IDRATGEIRTKVKLDRETRASYSLVAIPLSGR-------NIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLS--SHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPL-----RGFMTVNITIQDVNDNQPIFN----QSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDP-------RTGAIYINKALDFETKELHELVVVAKDHGEQPL-ETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHF------ALTTRDNSIYL-VIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRD--EGLNSAL-TYSLAETPETHAQWFQIDPQTGLI----TTRSHIDCETEPVPQLTVVARDG-GVPPLSSTATVLVTIHDVNDNEPIF---DQSFYNVSVAEN-EPVGRCILKVSASDPD 639 HSP 11 Score: 74.3294 bits (181), Expect = 7.828e-13 Identity = 90/344 (26.16%), Postives = 151/344 (43.90%), Query Frame = 1
Query: 1423 EIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFGTPSILENTKPGTVVFKII-AQDKD-EGENGRVTFSMEKSAFPSLEYLSIGETDGV----IKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL----RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII--IFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIF 2412
EIRT ++DRE + S +++ +P S I +++ KD+NDNAPT P V ++ A+D D E N + + + + S E DGV +++ +D E++ ++++ A D G P + ++ITIQDVNDN P F S T+ EN + V ++ D D D+ LV R ++ F I + I+ ++LD E V+A D P + T V + V D NDN P I IF S ++A+ + +P + +S +D D +E+ + L F + ++ +I+
Sbjct: 131 EIRTKVKLDRET--RASYSLVA-------IPLSGRNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETT----PGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDA-DENGLVEYAINRRQSDKEQMFRIDPRTGAIY---INKALDFETKELHELVVVAKDHGEQPLET-TAFVSIRVTDVNDNQPTINVIFLS-DDASPKISESAQPGEF-VARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIY 454
BLAST of Protocadherin-9 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249) HSP 1 Score: 165.236 bits (417), Expect = 1.384e-40 Identity = 179/675 (26.52%), Postives = 302/675 (44.74%), Query Frame = 1
Query: 604 TLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYL-NNKNYSIVEENKSNFFVAIVTVTSKENDL-FRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESS-LAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVI--SYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRRE--MAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNIN 2577
TL A D D + Y I ++ FRL+ + V ++L++ LDRETT YS + A+DGG T G + + I I D NDN P F+ Y V E +L++ A+D D NG + Y + R + F I+ +G IY+ K LD+E + + V+A + P+ +TA V I V +V D INV +L ++ + I E + FVA ++V ++ + ++ L +L ++ + Y V + +DRE + + +++ + D P +S I + I D NDN P +++E PGT V +++A D+DEG N +T+S+ ++ ++ I G+I +S IDCE+ + Q T V A D G+ P S+ + +TI DVNDN P F S ++ EN + ++ D D V+ +N + + F + + I LD E+ + F V+ATD G S T + +++ D NDN P + +P + ++ + + + + V A D D F + Y + + E+ +F IDR G IF R ++ H++ I+ + G +++S+ V + A P E N
Sbjct: 194 TLLPARDLDLEPYNTQRYNIVSG---NVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGG-TPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQM---FRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLE-----TTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVI-----VHLPLDREIVSNYTLSVV---ATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLT-----VVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEIC---IAGELDFERRSSYEFPVLATDRGG---LSTTAMIKMQLTDVNDNRP-VFYPREYKVSLRESPKASSQASSTPIVAVVATDPDY-GNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGG--NLRSNADAVVFLSIIDAMQRPPIFEKARYN 833 HSP 2 Score: 142.51 bits (358), Expect = 1.172e-33 Identity = 158/565 (27.96%), Postives = 259/565 (45.84%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKF-DPRFK------TGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKI--EIIIKDQNDNAPTLT--YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEI------------EVED--KDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLG--NPTNSVTGTVDVEVIDQNDNFP 2223
A DKD G++ TY + ++ + L +++ + L + + LD E++ +++ + A DGG T ++ I + + D NDN P F Y V E + + +I++++A+D D G N +I Y+ D + + + +F I +SG IYL+ PLD E + ++ V+A + P + V + VL+ D + + +K +EEN V V VT+ + DL + R L I+ + + V EI T + +DRE L E+ D P SA++ I + D NDNAP + S+ E PGT V ++ A D+D G+N +T+S+ K L SI T GVI+ + ++D E + + V A+D G P+ T + + + D+NDN P FTSS ++F + E+ VG I VE+ +D+ L +K+ F I + + +L R LDRE +F ++ A D+ NP +S TV +EV D NDN P
Sbjct: 955 AHDKDSGSSGQVTYSLVKESGKG---------LFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLST-NLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAA----HAKTRVIVRVLDANDN----DPKFQKSKYEFRIEENLRRGSVVGV-VTASDLDLGENAAIRYS-----LLPINSSFQVHPVTG-EISTREPLDRELRELYD---LVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEER----SIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSG---NLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAI-TVKIEVADVNDNAP 1483 HSP 3 Score: 130.183 bits (326), Expect = 6.280e-30 Identity = 178/709 (25.11%), Postives = 294/709 (41.47%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG------LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKP--LDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFV--------AIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNI---LCKESVDSHVPSSSAKIEIIIKDQNDNAPTL-TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-------------SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIEN 2565
PIF++ + ++E+ +G I A+D D G N + Y I F+ + S + E+ + LD E + Y F ++A D G + + I +++ D NDN P F YK ++E +S I+ + ATDPD G G++ Y+ + G F I+ +GEI++ +P L Q + A + + + A V +S+++ P I E+ + N++V + +V + D+ R I S G S + S IR + +D E ++ NI L + V H ++ I ++D NDNAP S+ E+ + G ++ A DKD G +G+VT+S+ K + L +I G + + +D ESS T++VTATD G+ ST+L I + +QDVNDN P F + E+ N+ + ++ D D ++ + R S + F I + I+ LDRE ++ V+ATD+ G P V V V+D NDN P Q + I R V+A+D D E I Y L + F + G I TR + + + + + + G T ++S+ +V V I S N+P I +
Sbjct: 609 PIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEG--------FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGL---STTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI-----FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRS----NADAVVFLSIIDAMQRP-------------PIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYS----IYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHT-----QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYESSQRH----TLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIY---LRAPLDRETRDRYQLTVLATDN-GTPAAHAKTRVIVRVLDANDNDPKF----QKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQG-TPVRSA-RVPVRIHVSDVNDNAPEIAD 1258 HSP 4 Score: 124.405 bits (311), Expect = 3.656e-28 Identity = 156/582 (26.80%), Postives = 254/582 (43.64%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQ--TDQKTGSINIAIRIIDENDNMPQFSSP------IYKEFVKEGLNSVRIL-RLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPL-----DYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLE-INVDYLNNKNYSIVEENKSNFFVAIVTVTS---KEN-----DLFRSIQCRLEHFQEILSLIS-KGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSS-------AKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITI--QDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPI 2226
+G I ATD D G N Y++ R P+ ++ + L ++S+T L + PLD E +Y + A+D T++ S+ + +RI+D ND+ P F SP F+ + ++ + A D D G NG++ Y+ TG F IN +G I L K L D EK F + A + P S+ ++ + V ++ P + Y +I+E S FV VT S EN ++ + L H +I+ +G + ++ + D + +S++ + K+ + +S A I I + D NDN+P + +G S+ EN++PG V+ ++A D DEG N + +S+ + SI + G + + + D E Q + T+ + A+D G +PKS +ITI +D NDN P+F S ++ E+ + V +I D D+ + LV N F I ++ I T LDRE +NF V+ATD S T V + V+D NDN PI
Sbjct: 1500 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI-----TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEP---KKSSLNLHLIVQGSHNNPPRFLQAVY----RATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGL-SVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGN--KFSIDSSSGELSARPL-DRE----QHSRYTLQIQASDRG-QPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLI---TTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPI 2056 HSP 5 Score: 121.709 bits (304), Expect = 2.476e-27 Identity = 158/713 (22.16%), Postives = 289/713 (40.53%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE----SYKVKSFEIRTNQ----EIDREKIPKIS---------------------------------------TN--------ILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIF-HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIF--PSQNNATVHVISYLEPR---NYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTI---FTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV 2517
+G ++ A D D G N Y ++ + F + ++ T+ LDRE Y+F ++A DGG+ + ++ ++ + I ++D NDN P F Y V + + +L++ A D D G N +I+Y + + + F IN +G + + L E V+A + P +S+ + L + + P V N+ Y ++ + S ++ V + +D R Q++ G+E S S EIR N+ + DR P +S TN +L + D+ +S A++ I ++D+NDN+P + ++ E GT V ++ A D D G N R+ + + +AF S G+++ ++D E + L I+ ATD G+ + I + I DVNDN P F ++++ T+ E + + I D D + + L +++ + + + +R L R LD E ++ VIA+D+ +T V V D+NDN P+ + P A + IS + ++ +TV+A D D + + Y +E + F + G + +R + A S G++ ++I + G ++KSS + V
Sbjct: 1967 LGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGK----------LDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAE---NSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNP-------PQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRR---------QKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFS-----GIVRTNIVLDRE--IRDIYKLKII--ATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLV-TVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLT----VRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRV 2636 HSP 6 Score: 114.005 bits (284), Expect = 5.372e-25 Identity = 158/629 (25.12%), Postives = 257/629 (40.86%), Query Frame = 1
Query: 601 ITLPVATDKDFGN-NQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKP--LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILD-YFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSL----------EYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIF-HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD-----VFDIDRQEGTIFTR 2418
I VATD D+GN QV ++ E F ++ T E+ V +P L T + ++ A DGG ++ + + IID P F Y +VKE I R + +G + ++ R+ + D YFSI +SG I + KPLD+E ++ + A PPV Y T V I V +V D E + I + + + + D S Q +E KG + +S + +Q +D E + + L + D VPS S + I++ +D NDN P + ++ E+ + ++ A D D G N R+T+ + + ++ ++ I G I +++ +D E+ + V ATD+G ++ + + D NDN PKF S F I EN + S VG + D D+ + N +R ++LP + + + ++T LDRE ++ V A D G P S V + V D NDN P I P ++ +V +P + + V A D+D + +I Y + D +F ID G I TR
Sbjct: 739 IVAVVATDPDYGNFGQVSYRIVAGNEAGIF----------RIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAV-VFLSIIDAMQRPPIFEKARYNYYVKED-----IPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPV----YGHT-QVNIEVEDVNDNAPEFEASMVR-----ISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKES----GKGLFAIDARSGHLILSQHLDYESSQR---HTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETR----DRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGE--NAAIRY---SLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQ-GTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVR---EEQPPGTEVVRVRAVDRDH-GQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTR 1320 HSP 7 Score: 107.457 bits (267), Expect = 6.650e-23 Identity = 172/710 (24.23%), Postives = 300/710 (42.25%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE--GLNSV-----------RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL-EHFQEILSLISKGDESYKVKSFE--IRTNQEIDREKIPK--ISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPS----------ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIK-VKSIIDCESSLAQFTTLTIVVTATDHG-IKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN------TTR-SLDREKDPKFNFQVI-------------------ATDSLGNPTNSV---TGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIE 2562
A D+D G N TY I + R D H ++ T S + +V LD E + Y + A DGG ++T + + + ++D NDN P F+S V+E L V ++R S + E + ++ Y +P K LI F I+ SG + + + LD E Q+ F+ + A++ T + +S +V+I V +V D E D ++ + E + T T + +Q RL +F ++ + +++ S + +D E + + + L + S + +S + + I D ND+AP +F +P+ I + T+ G VV I+A D+D G+NG++T+ E + I G+I+ VKS+ + + +++ A DHG +PK + L + + +Q ++N P+F + TI+EN SFV ++V K +H N L + PA + AN +FH++ TTR DRE + V ++DS+G+ +N T+ + V D NDN P F + + V EP TV A+D D+ + I Y + + + F ID G + + R + + + ++I + G + N+ I N+PR +
Sbjct: 1281 AVDRDHGQNASITYSIVKG--RDSDGHGLFSIDPT--SGVIRTRVV--LDHEERSIYRLGVAASDGGNPPRETVRM-LRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDL--RVTYTLNPLTKD--LIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTT--ASNNPQSSAITVKIEVADVNDNAPEWPQDPID---LQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAP---HFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTY--EITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFV--LQVTAKSLHGAENANLSYEIPAGV-------ANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSP--EFRPGSCYGLSVPENSEPG--VIHTVVASDLDEGPNADLI-YSITGGNLGNKFSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQG-HCNITIFVEDQNDNAPRFK 1953 HSP 8 Score: 90.5077 bits (223), Expect = 8.486e-18 Identity = 139/637 (21.82%), Postives = 254/637 (39.87%), Query Frame = 1
Query: 586 KIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPL--DRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTIT-------------------LYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKEN---DLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHG-IKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLV--LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTI 2409
+IG + VA D+D G+N TY+I+ + FR +N+ + +K P D E +++ + A D GQ + K S+N+ + + ++N P+F +Y+ + E + S +L+++A N + Y+ + D F ++ G I + D E Q + PV + T++ + A++ I+V +V D E + S+ E ++ +V E DL SI + S+ S E + + +DRE+ + + I + I I ++DQNDNAP T S+ E+ GT V +I A D D G N R+ +S+ A + +I G+I +D E + +V ATD G + +S + + I + D+NDN P F I + + +++ D D+ + +V L ++N A+ + + L+ ++SL E + +V+A D GNP S G +++ + + P++ F QN ++ P + + V A D + + +E + +D G I
Sbjct: 1622 RIGEVVAHIVAVDEDSGDNGQLTYEITGGNG---EGRFR---INSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEI-----PAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPG--SCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG--GNLGNKFSIDSSSGE---------LSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSL---ANETQWQFAIDGQSGLITTVGKLDRELQ----ASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGA--LSASQSLASESGKLLHLEVVARDK-GNPPQSSLGLIELLIGEAPQGTPVLRF--QNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEI 2222 HSP 9 Score: 83.1889 bits (204), Expect = 1.589e-15 Identity = 121/549 (22.04%), Postives = 234/549 (42.62%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL--EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL------TYFGT-PSILENTKPGTVVFKII---AQDKD-EGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGT-----VDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNT-IEYHLESESD--VFDIDRQEGTIFTRREM 2427
+ I + DENDN P+FS + V EG N + ++ A D D G N ++ Y A +++ SG + LD E + +K +IA + P T TA++ + +++V D N N V E + I ++++ + D + ++ RL E +I ++ + Y S ++ + +D E + +++ ++ + + + + D+NDNAP YF P+I E ++ +V F ++ A D D EG N +V + +E P+ E S+ ++GV+ V ++ + +++ + + A D G + + + D +F + I E S V +++ + + ++ ++ A F +L+ + + LDRE++ + +++ + G P S + V + ++D NDNFPI ++ A IS L P Y + A D DQ + N+ + Y + S +D +F ID G +F +
Sbjct: 2308 LVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIE----PAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQM----TGTATIRVQIVDVND-----NQPTFPPNNLVTVSE-ATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRY---SGKLVLKRRLDYELQQEYELDVIASDAAHE----ARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIE----PAQEGFSVHPSNGVVSV-NMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVV--LQLGQDALDQSLAIIAGNEESA---FELLQSKAIVL----VKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAE---ISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRL 2818 HSP 10 Score: 78.9518 bits (193), Expect = 2.993e-14 Identity = 147/560 (26.25%), Postives = 224/560 (40.00%), Query Frame = 1
Query: 721 LNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKP----LDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEEN----KSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYF-----GTPSILENTKPGTVVFKIIAQDKD---EGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLP------FVILKKANRIFHLNTTRS-LDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
++ T E++ LDRET YS + + G +I + + + DENDN P F + ++ EF + V+ L A D D Y A L S E G +YL LD E + + A++ TPP+ +V I++ +V D N ++ ++ V EN S V + EN L R + +E + I ++ I N+ +D E ++ K+ + + ++A + I + D NDN PT+ +P I E+ +PG V +I D D E N VT + F ++ D I + I+ + T+ V ATD G P I + I DVNDN P+F +ME + V ++ D+D + +N L + + A P F I + I TTRS +D E +P V+A D G P S T TV V + D NDN PI Q+ V V EP + VSA+D D
Sbjct: 125 IDRATGEIRTKVKLDRETRASYSLVAIPLSGR-------NIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLS--SHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPL-----RGFMTVNITIQDVNDNQPIFN----QSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDP-------RTGAIYINKALDFETKELHELVVVAKDHGEQPL-ETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHF------ALTTRDNSIYL-VIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRD--EGLNSAL-TYSLAETPETHAQWFQIDPQTGLI----TTRSHIDCETEPVPQLTVVARDG-GVPPLSSTATVLVTIHDVNDNEPIF---DQSFYNVSVAEN-EPVGRCILKVSASDPD 639 HSP 11 Score: 74.3294 bits (181), Expect = 7.828e-13 Identity = 90/344 (26.16%), Postives = 151/344 (43.90%), Query Frame = 1
Query: 1423 EIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFGTPSILENTKPGTVVFKII-AQDKD-EGENGRVTFSMEKSAFPSLEYLSIGETDGV----IKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL----RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII--IFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIF 2412
EIRT ++DRE + S +++ +P S I +++ KD+NDNAPT P V ++ A+D D E N + + + + S E DGV +++ +D E++ ++++ A D G P + ++ITIQDVNDN P F S T+ EN + V ++ D D D+ LV R ++ F I + I+ ++LD E V+A D P + T V + V D NDN P I IF S ++A+ + +P + +S +D D +E+ + L F + ++ +I+
Sbjct: 131 EIRTKVKLDRET--RASYSLVA-------IPLSGRNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETT----PGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDA-DENGLVEYAINRRQSDKEQMFRIDPRTGAIY---INKALDFETKELHELVVVAKDHGEQPLET-TAFVSIRVTDVNDNQPTINVIFLS-DDASPKISESAQPGEF-VARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIY 454
BLAST of Protocadherin-9 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900) HSP 1 Score: 145.206 bits (365), Expect = 1.785e-34 Identity = 153/561 (27.27%), Postives = 253/561 (45.10%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGE--IYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII 2229
V +G+ I A D D G N TY IS + D++F L V + T ++ KPLDRE +++F ++A DGG K+ S ++ I + D NDN P F+ Y+ V E + ++ATDPDE + ++ Y+ T F+I +G I + + LDY+++ F V A + + TA+V I++ + + P+ N Y + S+ E+ V +V+ T + + I L + I L S S ++ I TN +DRE + K+ + + S + +EI + D NDNAP F +P SILE+ GT V ++ A D D G NGR+ + + ++ I T G I+ +D ES + A D G P S+ +++ I ++DVND+ P F S + + EN+ S VGEI D D + +N V+ + + ++ + + L T LD E K F+++ + +P +++ V D NDN P++
Sbjct: 702 VPVGYNIIRVQAYDSDEGANAEITYSISER-----DDNFPLAV----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGG-VPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE--DSRLHYEI-----TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG------RSDTATVHINITDANNFAPIFENAPY----SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNE-ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSL-SDTTDVEIGVTDVNDNAPA---FKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFV-IDPTSGTIRTNKGLDRES----VAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPD--EGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRK-RFELVVRAA--SPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 140.198 bits (352), Expect = 5.134e-33 Identity = 179/699 (25.61%), Postives = 302/699 (43.20%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISR----------QEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID--GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE----GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV----KSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAML----PFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPR--NYKFMTVSANDQDQTSEFNTIEYHLESESDV----FDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
P F E I E +G T+ ATD+D G N Y I QE F R V++T +S LDRET++ Y + A D Q++++T + ++ ++++D+NDN PQFS Y V E G + + ATD D+G N I Y G FSI+ SG++ L KPLDYE ++ + A + P ++T + ++V++ D Y + S++E + I+ V + ++D + EI IS+ D+++ + ++ ++T + +DRE+ + + ++ K D VP S+S+ + I ++D NDN P Y+ ++ E+ PGT V + A D D E+ R+ + + ++ G+I + +D Q + V ATD G + + + I+IT D N+ P F ++ ++ E+ + V + D D V+ I L ++ L PF I + I T LDRE + V A D GNP+ S T V++ V D NDN P P ++ S LE + V+A+D D N +L S+ D+ F ID GTI T + + + + + + G + S+V+V + ++
Sbjct: 462 PTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS----------LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-----IGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR----SNTTQLLVNVIDANDNAPRF---YTSQFQESVLENVPVGY--NIIRVQAYDSDEGANA--------EITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAK---DGGVPPKSASSSVVITVQDVNDNDPAFNPKYY-EANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLD----YKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIV---TNAPLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSP------LYQASILEDALVGTSVIQVAASDPDVG--LNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE 1104 HSP 3 Score: 114.775 bits (286), Expect = 3.676e-25 Identity = 145/514 (28.21%), Postives = 227/514 (44.16%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID-GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAML 2040
P FN + E + E G +T ATD D + Y+I+ R F + N +T+ + LD + ++ + A D GG++D T INI D N+ P F + Y V E +L +SATD D G+N +I Y + G D FSIN +G I PLD E + + V A + P + T VEI V +V D N + Y SI+E+ + +++ V + + D+ + R+++ +LS D S+ + S IRTN+ +DRE + + +VD P SS+ +++I ++D ND+ PT T + EN+ G+VV +I A D DEG N V +S+ + +AF + G + + +D ES+ +F +VV A P D I I + DVNDN P +IF ++ + +G I D DV D ++ + S N A L
Sbjct: 792 PAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTR---GRFAITSQNGRGLITIA----QSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT----DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPS----LSDTTDVEIGVTDVND-----NAPAFKSPLYQASILED--ALVGTSVIQVAASDPDV--GLNGRIKY---LLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAI---AVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLV--TRPGSERAQLLTMTELDYESTRKRFE---LVVRAAS---PPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANL 1265 HSP 4 Score: 85.8853 bits (211), Expect = 1.995e-16 Identity = 123/526 (23.38%), Postives = 218/526 (41.44%), Query Frame = 1
Query: 826 QKTGSINIAIRIIDENDNM-PQFSSPIY-KEFVKEGLNSVRILRLSATDP-DEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRS--IQCRLEHFQEILSLISKGDESYKV-----KSFEIRTNQEIDREKIPKISTNILCKE--SVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGT---VVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFN 2343
Q+ +IA R+ E N P F +Y ++E + + A DP D + ++ D R ++ F ++ +G + LD E F V+A + + PP + T +++++VL+ D + SI E + ++T+ + + D+ ++ I+ +E + L D+ + +S I T +DRE + + S S +++A +++ + D NDN P TY T + E+ GT V I A D D+G N + +++ S SI G + + +D ES + +V+ A D G +S Q+ + + D NDN P+F +S +++EN + ++ D D + + S+ P + + + T + LDRE+ +F FQV+A D G P S + +V + V D NDN P P A V +P TV+A D D+ S +
Sbjct: 337 QEFNDTDIARRVRRELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQS------LFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPP-----RSGTTTLQVNVLDCNDHSPTFEAEQFEA---SIRE--GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQ--DQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY--TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS--QFSIDSMSGDVSLVKPLDYES----VRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWV---QTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDP-AFNPKYYEANV---GEDQPPGTPVTTVTATDPDEDSRLH 828
BLAST of Protocadherin-9 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223) HSP 1 Score: 145.206 bits (365), Expect = 1.926e-34 Identity = 156/561 (27.81%), Postives = 256/561 (45.63%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGE--IYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII 2229
V +G+ I A D D G N TY IS + D++F L V + T ++ KPLDRE +++F ++A DGG K+ S ++ I + D NDN P F+ Y+ V E + ++ATDPDE + ++ Y+ T F+I +G I + + LDY+++ F V A + + TA+V I++ + + P+ N Y + S+ E+ V +V+ T + + I L + I L S S ++ I TN +DRE + K+ + + S + +EI + D NDNAP F +P SILE+ GT V ++ A D D G NGR+ + + ++ I T G I+ +D ES +A F I V D G P S+ +++ I ++DVND+ P F S + + EN+ S VGEI D D + +N V+ + + ++ + + L T LD E K F+++ + +P +++ V D NDN P++
Sbjct: 702 VPVGYNIIRVQAYDSDEGANAEITYSISER-----DDNFPLAV----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGG-VPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE--DSRLHYEI-----TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG------RSDTATVHINITDANNFAPIFENAPY----SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNE-ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSL-SDTTDVEIGVTDVNDNAPA---FKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFV-IDPTSGTIRTNKGLDRES-VAVFHLTAIAV---DKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPD--EGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRK-RFELVVRAA--SPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 140.198 bits (352), Expect = 6.401e-33 Identity = 179/699 (25.61%), Postives = 302/699 (43.20%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISR----------QEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID--GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE----GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV----KSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAML----PFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPR--NYKFMTVSANDQDQTSEFNTIEYHLESESDV----FDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
P F E I E +G T+ ATD+D G N Y I QE F R V++T +S LDRET++ Y + A D Q++++T + ++ ++++D+NDN PQFS Y V E G + + ATD D+G N I Y G FSI+ SG++ L KPLDYE ++ + A + P ++T + ++V++ D Y + S++E + I+ V + ++D + EI IS+ D+++ + ++ ++T + +DRE+ + + ++ K D VP S+S+ + I ++D NDN P Y+ ++ E+ PGT V + A D D E+ R+ + + ++ G+I + +D Q + V ATD G + + + I+IT D N+ P F ++ ++ E+ + V + D D V+ I L ++ L PF I + I T LDRE + V A D GNP+ S T V++ V D NDN P P ++ S LE + V+A+D D N +L S+ D+ F ID GTI T + + + + + + G + S+V+V + ++
Sbjct: 462 PTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS----------LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-----IGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR----SNTTQLLVNVIDANDNAPRF---YTSQFQESVLENVPVGY--NIIRVQAYDSDEGANA--------EITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAK---DGGVPPKSASSSVVITVQDVNDNDPAFNPKYY-EANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLD----YKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIV---TNAPLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSP------LYQASILEDALVGTSVIQVAASDPDVG--LNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE 1104 HSP 3 Score: 114.39 bits (285), Expect = 4.280e-25 Identity = 145/514 (28.21%), Postives = 227/514 (44.16%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID-GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAML 2040
P FN + E + E G +T ATD D + Y+I+ R F + N +T+ + LD + ++ + A D GG++D T INI D N+ P F + Y V E +L +SATD D G+N +I Y + G D FSIN +G I PLD E + + V A + P + T VEI V +V D N + Y SI+E+ + +++ V + + D+ + R+++ +LS D S+ + S IRTN+ +DRE + + +VD P SS+ +++I ++D ND+ PT T + EN+ G+VV +I A D DEG N V +S+ + +AF + G + + +D ES+ +F +VV A P D I I + DVNDN P +IF ++ + +G I D DV D ++ + S N A L
Sbjct: 792 PAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTR---GRFAITSQNGRGLITIA----QSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT----DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPS----LSDTTDVEIGVTDVND-----NAPAFKSPLYQASILED--ALVGTSVIQVAASDPDV--GLNGRIKY---LLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAI---AVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLV--TRPGSERAQLLTMTELDYESTRKRFE---LVVRAAS---PPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANL 1265 HSP 4 Score: 85.8853 bits (211), Expect = 2.207e-16 Identity = 123/526 (23.38%), Postives = 218/526 (41.44%), Query Frame = 1
Query: 826 QKTGSINIAIRIIDENDNM-PQFSSPIY-KEFVKEGLNSVRILRLSATDP-DEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRS--IQCRLEHFQEILSLISKGDESYKV-----KSFEIRTNQEIDREKIPKISTNILCKE--SVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGT---VVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFN 2343
Q+ +IA R+ E N P F +Y ++E + + A DP D + ++ D R ++ F ++ +G + LD E F V+A + + PP + T +++++VL+ D + SI E + ++T+ + + D+ ++ I+ +E + L D+ + +S I T +DRE + + S S +++A +++ + D NDN P TY T + E+ GT V I A D D+G N + +++ S SI G + + +D ES + +V+ A D G +S Q+ + + D NDN P+F +S +++EN + ++ D D + + S+ P + + + T + LDRE+ +F FQV+A D G P S + +V + V D NDN P P A V +P TV+A D D+ S +
Sbjct: 337 QEFNDTDIARRVRRELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQS------LFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPP-----RSGTTTLQVNVLDCNDHSPTFEAEQFEA---SIRE--GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQ--DQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY--TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS--QFSIDSMSGDVSLVKPLDYES----VRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWV---QTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDP-AFNPKYYEANV---GEDQPPGTPVTTVTATDPDEDSRLH 828
BLAST of Protocadherin-9 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214) HSP 1 Score: 145.206 bits (365), Expect = 1.926e-34 Identity = 156/561 (27.81%), Postives = 256/561 (45.63%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGE--IYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII 2229
V +G+ I A D D G N TY IS + D++F L V + T ++ KPLDRE +++F ++A DGG K+ S ++ I + D NDN P F+ Y+ V E + ++ATDPDE + ++ Y+ T F+I +G I + + LDY+++ F V A + + TA+V I++ + + P+ N Y + S+ E+ V +V+ T + + I L + I L S S ++ I TN +DRE + K+ + + S + +EI + D NDNAP F +P SILE+ GT V ++ A D D G NGR+ + + ++ I T G I+ +D ES +A F I V D G P S+ +++ I ++DVND+ P F S + + EN+ S VGEI D D + +N V+ + + ++ + + L T LD E K F+++ + +P +++ V D NDN P++
Sbjct: 702 VPVGYNIIRVQAYDSDEGANAEITYSISER-----DDNFPLAV----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGG-VPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE--DSRLHYEI-----TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG------RSDTATVHINITDANNFAPIFENAPY----SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNE-ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSL-SDTTDVEIGVTDVNDNAPA---FKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFV-IDPTSGTIRTNKGLDRES-VAVFHLTAIAV---DKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPD--EGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRK-RFELVVRAA--SPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 140.198 bits (352), Expect = 6.401e-33 Identity = 179/699 (25.61%), Postives = 302/699 (43.20%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISR----------QEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID--GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE----GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV----KSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAML----PFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPR--NYKFMTVSANDQDQTSEFNTIEYHLESESDV----FDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
P F E I E +G T+ ATD+D G N Y I QE F R V++T +S LDRET++ Y + A D Q++++T + ++ ++++D+NDN PQFS Y V E G + + ATD D+G N I Y G FSI+ SG++ L KPLDYE ++ + A + P ++T + ++V++ D Y + S++E + I+ V + ++D + EI IS+ D+++ + ++ ++T + +DRE+ + + ++ K D VP S+S+ + I ++D NDN P Y+ ++ E+ PGT V + A D D E+ R+ + + ++ G+I + +D Q + V ATD G + + + I+IT D N+ P F ++ ++ E+ + V + D D V+ I L ++ L PF I + I T LDRE + V A D GNP+ S T V++ V D NDN P P ++ S LE + V+A+D D N +L S+ D+ F ID GTI T + + + + + + G + S+V+V + ++
Sbjct: 462 PTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS----------LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-----IGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR----SNTTQLLVNVIDANDNAPRF---YTSQFQESVLENVPVGY--NIIRVQAYDSDEGANA--------EITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAK---DGGVPPKSASSSVVITVQDVNDNDPAFNPKYY-EANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLD----YKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIV---TNAPLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSP------LYQASILEDALVGTSVIQVAASDPDVG--LNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE 1104 HSP 3 Score: 114.39 bits (285), Expect = 4.280e-25 Identity = 145/514 (28.21%), Postives = 227/514 (44.16%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID-GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAML 2040
P FN + E + E G +T ATD D + Y+I+ R F + N +T+ + LD + ++ + A D GG++D T INI D N+ P F + Y V E +L +SATD D G+N +I Y + G D FSIN +G I PLD E + + V A + P + T VEI V +V D N + Y SI+E+ + +++ V + + D+ + R+++ +LS D S+ + S IRTN+ +DRE + + +VD P SS+ +++I ++D ND+ PT T + EN+ G+VV +I A D DEG N V +S+ + +AF + G + + +D ES+ +F +VV A P D I I + DVNDN P +IF ++ + +G I D DV D ++ + S N A L
Sbjct: 792 PAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTR---GRFAITSQNGRGLITIA----QSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT----DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPS----LSDTTDVEIGVTDVND-----NAPAFKSPLYQASILED--ALVGTSVIQVAASDPDV--GLNGRIKY---LLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAI---AVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLV--TRPGSERAQLLTMTELDYESTRKRFE---LVVRAAS---PPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANL 1265 HSP 4 Score: 85.8853 bits (211), Expect = 2.207e-16 Identity = 123/526 (23.38%), Postives = 218/526 (41.44%), Query Frame = 1
Query: 826 QKTGSINIAIRIIDENDNM-PQFSSPIY-KEFVKEGLNSVRILRLSATDP-DEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRS--IQCRLEHFQEILSLISKGDESYKV-----KSFEIRTNQEIDREKIPKISTNILCKE--SVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGT---VVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFN 2343
Q+ +IA R+ E N P F +Y ++E + + A DP D + ++ D R ++ F ++ +G + LD E F V+A + + PP + T +++++VL+ D + SI E + ++T+ + + D+ ++ I+ +E + L D+ + +S I T +DRE + + S S +++A +++ + D NDN P TY T + E+ GT V I A D D+G N + +++ S SI G + + +D ES + +V+ A D G +S Q+ + + D NDN P+F +S +++EN + ++ D D + + S+ P + + + T + LDRE+ +F FQV+A D G P S + +V + V D NDN P P A V +P TV+A D D+ S +
Sbjct: 337 QEFNDTDIARRVRRELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQS------LFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPP-----RSGTTTLQVNVLDCNDHSPTFEAEQFEA---SIRE--GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQ--DQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY--TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS--QFSIDSMSGDVSLVKPLDYES----VRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWV---QTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDP-AFNPKYYEANV---GEDQPPGTPVTTVTATDPDEDSRLH 828
BLAST of Protocadherin-9 vs. Ensembl Zebrafish
Match: pcdh2g28 (protocadherin 2 gamma 28 [Source:ZFIN;Acc:ZDB-GENE-050610-19]) HSP 1 Score: 188.734 bits (478), Expect = 1.842e-48 Identity = 196/695 (28.20%), Postives = 317/695 (45.61%), Query Frame = 1
Query: 223 VINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLN-SVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS-----FEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEK---SAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIF--------HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIII 2232
V NI D L D+K+L ++ + S+ + + L +D + +C V C F I + ES + I + I D ND+ P+F+ + I+ +ISES G +L A D D G N +++Y ++ ++ HF L V++ + S VE+ + PLDRET +++ L A DGG Q+TG++ I + +ID NDN P FS P+Y+ + N ++R+SATD D+G NG+I Y F ++ LD F I D+GEI +K LDYE+ F+ + A + T ++ V I + +V D P I++ +N I E+ +A++ V ++ ++C + D +KVKS + + T+Q +DREKI + + + + D PS S + + I D NDNAP T I+EN PG V + A D+D G N R+++ +E + + ++S+ G I D E Q +I V A D G P S+++ + I IQD NDN P+ +++ + S V EI DV + V+ S A L + + K +R + T R + + K V+ D+ G P+ S T V+V V D+FP ++
Sbjct: 54 VGNIVQDLGL-----DVKRL--KSGRARIFTEDSREYIALNVDKGTLVVKERIDREELCAQVSPCS------LHFQIIL------ESPMELHRIDVEILDINDHAPVFDRKEIDFQISESALPGARFSLDSAHDPDTGTNALKSYTLNPKD------HFDLKVMSRNDGSKYVEMVLQAPLDRETQHEHKLTLTAFDGGNP-QRTGTVRICVTVIDANDNAPVFSLPVYRVSLFENAPNGAVVVRVSATDNDQGANGEITYSFS---RSSGKNLDLFHIGADTGEITVKGHLDYERAKQFELNIDATDKGG------LTDSSKVIIDITDVNDNPPVISLISFSNP---IPEDAAPETVIAMLNVKDLDSGKNGQVKCYI-----------SADMPFKVKSSAQNFYSLITDQLLDREKISEYNITV---TATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTAFIMENNSPGVSVLSVKAHDRDSGNNARISYFLEDVVVNGVSASTFISVNAESGEILAARSFDYE----QTKDFSIRVKAQDGGSPPLSSNVSVKILIQDQNDNAPQ-----VLYPVQSG---ASVVAEIVPRSADVGYLVTKVVAVDVDSGQNAWLSYKLHKATDRALFEVGAQNGEIRTVRQVTDKDAVKQRLTVVVEDN-GQPSRSATVNVNVAVA---DSFPEVL 680 HSP 2 Score: 127.872 bits (320), Expect = 2.017e-29 Identity = 163/588 (27.72%), Postives = 257/588 (43.71%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSG--EIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI-VEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEI---LSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKS--------IIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINL------VLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRN----YKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
I + I+D ND+ P F I + + L R SA DPD G N Y +P+ L S N+ S E+ L+ PLD E Q K + A + P T T + ++V++ D N + Y + + EN N V +V V++ +ND + + + L L G ++ EI +D E+ + NI ++ D + S+K+ I I D NDN P +L F P I E+ P TV+ + +D D G+NG+V Y+S D KVKS I D + + I VTATD G ST+ +++ I DVNDN P F IMENN V ++ D+D ++ + V+ + A + ++ I RS D E+ F+ +V A D G+P S +V + + DQNDN P +++P Q+ A+ V++ + PR+ Y V A D D + + + Y L +D +F++ Q G I T R++ D + + + V + G S ++V VNV +
Sbjct: 128 IDVEILDINDHAPVFDRKEIDFQISESALPGARFSLDSAHDPDTGTNALKSYTLNPK---DHFDLKVMSRNDGSKYVEMVLQAPLDRETQHEHKLTLTAFDGGNP----QRTGTVRICVTVIDAND-----NAPVFSLPVYRVSLFENAPNGAV-VVRVSATDNDQGANGEITYSFSRSSGKNLDLFHIGADT-----GEITVKGHLDYERAKQFELNI---DATDKGGLTDSSKVIIDITDVNDNPPVISLISFSNP-IPEDAAPETVIAMLNVKDLDSGKNGQVKC-----------YIS---ADMPFKVKSSAQNFYSLITDQLLDREKISEYNITVTATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTAFIMENNSPGVSVLSVKAHDRDSGNNARISYFLEDVVVNGVSASTFISVNAESGEIL---AARSFDYEQTKDFSIRVKAQDG-GSPPLSSNVSVKILIQDQNDNAPQVLYPVQSGAS--VVAEIVPRSADVGYLVTKVVAVDVD-SGQNAWLSYKLHKATDRALFEVGAQNGEIRTVRQVTDKDAVKQRLTVVVEDNGQPSRSATVNVNVAV 672
BLAST of Protocadherin-9 vs. Ensembl Zebrafish
Match: pcdh2g28 (protocadherin 2 gamma 28 [Source:ZFIN;Acc:ZDB-GENE-050610-19]) HSP 1 Score: 186.808 bits (473), Expect = 8.997e-48 Identity = 173/592 (29.22%), Postives = 280/592 (47.30%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLN-SVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS-----FEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEK---SAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIF--------HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIII 2232
P+F+ + I+ +ISE G +L A D D G N +++Y ++ ++ HF L V++ + S VE+ + PLDRET +++ L A DGG Q+TG++ I + +ID NDN P FS P+Y+ + N ++R+SATD D+G NG+I Y F ++ LD F I D+GEI +K LDYE+ F+ + A + T ++ V I + +V D P I++ +N I E+ +A++ V ++ ++C + D +KVKS + + T+Q +DREKI + + + + D PS S + + I D NDNAP +Y T I+EN PG V + A D+D G N R+++ +E + + ++S+ G I D E Q +I V A D G P S+++ + I IQD NDN P+ +++ + S V EI DV + V+ S A L + + K +R + T R + + K V+ D+ G P+ S T V+V V D+FP ++
Sbjct: 140 PVFDRKEIDFQISELALPGARFSLDSAQDLDTGTNALKSYTLNPKD------HFDLKVMSRNDGSKYVEMVLQAPLDRETQHEHKLTLTAFDGGNP-QRTGTVRICVTVIDANDNAPVFSLPVYRVSLFENAPNGAVVVRVSATDNDQGANGEITYSFS---RSSGKNLDLFHIGPDTGEITVKGHLDYERAKQFELNIDATDKGG------LTDSSKVIIDITDVNDNPPVISLISFSNP---IPEDAAPETVIAMLNVKDLDSGKNGQVKCYI-----------SADMPFKVKSSAQNFYSLITDQLLDREKISEYNITV---TATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSY--TAFIIENNSPGVSVLSVKAHDRDSGNNARISYFLEDVVVNGVSASTFISVNAESGEILAARSFDYE----QTKDFSIRVKAQDGGSPPLSSNVSVKILIQDQNDNAPQ-----VLYPVQSG---ASVVAEIVPRSADVGYLVTKVVAVDVDSGQNAWLSYKLHKATDRALFEVGAQNGEIRTVRQVTDKDAVKQRLTVVVEDN-GQPSRSATVNVNVAVA---DSFPEVL 680 HSP 2 Score: 120.939 bits (302), Expect = 3.275e-27 Identity = 161/588 (27.38%), Postives = 256/588 (43.54%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSG--EIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI-VEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEI---LSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKS--------IIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINL------VLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRN----YKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
I + I+D ND+ P F I + + L R SA D D G N Y +P+ L S N+ S E+ L+ PLD E Q K + A + P T T + ++V++ D N + Y + + EN N V +V V++ +ND + + + L L G ++ EI +D E+ + NI ++ D + S+K+ I I D NDN P +L F P I E+ P TV+ + +D D G+NG+V Y+S D KVKS I D + + I VTATD G ST+ +++ I DVNDN P F I+ENN V ++ D+D ++ + V+ + A + ++ I RS D E+ F+ +V A D G+P S +V + + DQNDN P +++P Q+ A+ V++ + PR+ Y V A D D + + + Y L +D +F++ Q G I T R++ D + + + V + G S ++V VNV +
Sbjct: 128 IDVEILDINDHAPVFDRKEIDFQISELALPGARFSLDSAQDLDTGTNALKSYTLNPK---DHFDLKVMSRNDGSKYVEMVLQAPLDRETQHEHKLTLTAFDGGNP----QRTGTVRICVTVIDAND-----NAPVFSLPVYRVSLFENAPNGAV-VVRVSATDNDQGANGEITYSFSRSSGKNLDLFHIGPDT-----GEITVKGHLDYERAKQFELNI---DATDKGGLTDSSKVIIDITDVNDNPPVISLISFSNP-IPEDAAPETVIAMLNVKDLDSGKNGQVKC-----------YIS---ADMPFKVKSSAQNFYSLITDQLLDREKISEYNITVTATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTAFIIENNSPGVSVLSVKAHDRDSGNNARISYFLEDVVVNGVSASTFISVNAESGEIL---AARSFDYEQTKDFSIRVKAQDG-GSPPLSSNVSVKILIQDQNDNAPQVLYPVQSGAS--VVAEIVPRSADVGYLVTKVVAVDVD-SGQNAWLSYKLHKATDRALFEVGAQNGEIRTVRQVTDKDAVKQRLTVVVEDNGQPSRSATVNVNVAV 672
BLAST of Protocadherin-9 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 182.956 bits (463), Expect = 2.162e-46 Identity = 186/703 (26.46%), Postives = 319/703 (45.38%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN-----NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTPSI-----LENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD----------VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFSTSE 2619
+G +PVATD+D G+N + Y ++ T N F L V + +L V LDRE + Y ++ +DGG +++ ++ + I I D NDN+P+F Y+ E + +L++ A D D G NG++ Y + + ++ SI+ ++G I++K +D E+ + KF V A + P +S A V I+V + D I + + + +I E+ VA+V V+ ++ + C + FQ L S+ K K F ++T +D E+I + I+ VDS P SS+ +++ + D NDNAP + P++ E +PG V ++A D D G N +T+S+ + P I G ++V S +D E Q +V A D G+ + + + D NDN PKF + F++ EN S VG + V D D ++ + L S P F+I N + + +T S DREK+ ++F++ A D G+P S + + V+D+NDN P + P+ ++ +L+PR S ++ E I+ L SE D +F I EG I +E IG H + + V + G +++ V++ ++ + N +E GL+ H+ ++ E
Sbjct: 174 VGALFAIPVATDRDSGSNGIADYALTTGPEAT--NLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSAL-LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSL---HQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSK----SSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQ--LRSASETGNDRKRKYF-LQTTTLLDYERIKEYRIEIVA---VDSGNPALSSTNSLKVQVTDMNDNAPVFS----PTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPE-GLFEINPNTGEVRVMSQLDRE----QLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQL-SVEPDNGKFMI---QNGTYTILSTISFDREKESTYSFRLKAVDG-GDPPRSSYVGITINVLDENDNAPYVTKPANSS-----YKFLDPR------TSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRI-SSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNETIG--NVSHVE-------GLVGHSLYTPLE 825 HSP 2 Score: 100.523 bits (249), Expect = 6.907e-21 Identity = 140/543 (25.78%), Postives = 228/543 (41.99%), Query Frame = 1
Query: 853 IRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLS-ATDPDEGINGKIIYKFDPRFKTGALILDYFSIN--EDSGE----IYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ---EILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYF---------GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSL--AQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFT 2415
I I+DENDN PQFSSP+ + E + + + ATD D G NG Y TG + FS+ +DS E + + LD E + + + V+ +PP S+A + I++ + D NV +Y S +++ V + ++D+ + + Q ++ L+S D + + I +DRE+I + + K++ SS A + I +KDQNDNAP++ G +I E+ GT V + D+DEGEN VT + + S ET K K + + L + I + A D G S+ + + + D+NDN P F+ + E N V ++ D D + L S +P + + + LDRE+ + F V A D G P+ T TV V+V+D+NDN P + N + V + P + M V+ ND D+ E ++ +E ++ F I TI +
Sbjct: 147 IEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYA----LTTGPEATNLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPP-----RQSSALLRITITDAND-----NVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSI-DRNTGI----IFVKGSVDREEISILKFYVQAKDN-GPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDV--PFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTY-SITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADK-GVPSLRGTATVVVKVLDRNDNDPKFML---NGYSFSVQENMPPLSPVGM-VTVNDHDE-GENARVQLSVEPDNGKFMIQNGTYTILS 660
BLAST of Protocadherin-9 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 182.57 bits (462), Expect = 2.794e-46 Identity = 186/703 (26.46%), Postives = 320/703 (45.52%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN-----NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTPSI-----LENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD----------VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFSTSE 2619
+G +PVATD+D G+N + Y ++ T N F L V + +L V LDRE + Y ++ +DGG +++ ++ + I I D NDN+P+F Y+ E + +L++ A D D G NG++ Y + + ++ SI+ ++G I++K +D E+ + KF V A + P +S A V I+V + D I + + + +I E+ VA+V V+ ++ + C + FQ L S+ K K F ++T +D E+I + I+ +VDS P SS+ +++ + D NDNAP + P++ E +PG V ++A D D G N +T+S+ + P I G ++V S +D E Q +V A D G+ + + + D NDN PKF + F++ EN S VG + V D D ++ + L S P F+I N + + +T S DREK+ ++F++ A D G+P S + + V+D+NDN P + P+ ++ +L+PR S ++ E I+ L SE D +F I EG I +E IG H + + V + G +++ V++ ++ + N +E GL+ H+ ++ E
Sbjct: 169 VGALFAIPVATDRDSGSNGIADYALTTGPEAT--NLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSAL-LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSL---HQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSK----SSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQ--LRSASETGNDRKRKYF-LQTTTLLDYERIKEYRIEIV---AVDSGNPALSSTNSLKVQVTDMNDNAPVFS----PTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPE-GLFEINPNTGEVRVMSQLDRE----QLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQL-SVEPDNGKFMI---QNGTYTILSTISFDREKESTYSFRLKAVDG-GDPPRSSYVGITINVLDENDNAPYVTKPANSS-----YKFLDPR------TSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRI-SSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNETIG--NVSHVE-------GLVGHSLYTPLE 820 HSP 2 Score: 100.138 bits (248), Expect = 9.100e-21 Identity = 140/543 (25.78%), Postives = 228/543 (41.99%), Query Frame = 1
Query: 853 IRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLS-ATDPDEGINGKIIYKFDPRFKTGALILDYFSIN--EDSGE----IYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ---EILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYF---------GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSL--AQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFT 2415
I I+DENDN PQFSSP+ + E + + + ATD D G NG Y TG + FS+ +DS E + + LD E + + + V+ +PP S+A + I++ + D NV +Y S +++ V + ++D+ + + Q ++ L+S D + + I +DRE+I + + K++ SS A + I +KDQNDNAP++ G +I E+ GT V + D+DEGEN VT + + S ET K K + + L + I + A D G S+ + + + D+NDN P F+ + E N V ++ D D + L S +P + + + LDRE+ + F V A D G P+ T TV V+V+D+NDN P + N + V + P + M V+ ND D+ E ++ +E ++ F I TI +
Sbjct: 142 IEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYA----LTTGPEATNLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPP-----RQSSALLRITITDAND-----NVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSI-DRNTGI----IFVKGSVDREEISILKFYVQAKDN-GPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDV--PFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTY-SITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADK-GVPSLRGTATVVVKVLDRNDNDPKFML---NGYSFSVQENMPPLSPVGM-VTVNDHDE-GENARVQLSVEPDNGKFMIQNGTYTILS 655
BLAST of Protocadherin-9 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 182.57 bits (462), Expect = 3.045e-46 Identity = 186/703 (26.46%), Postives = 319/703 (45.38%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN-----NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTPSI-----LENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD----------VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFSTSE 2619
+G +PVATD+D G+N + Y ++ T N F L V + +L V LDRE + Y ++ +DGG +++ ++ + I I D NDN+P+F Y+ E + +L++ A D D G NG++ Y + + ++ SI+ ++G I++K +D E+ + KF V A + P +S A V I+V + D I + + + +I E+ VA+V V+ ++ + C + FQ L S+ K K F ++T +D E+I + I+ VDS P SS+ +++ + D NDNAP + P++ E +PG V ++A D D G N +T+S+ + P I G ++V S +D E Q +V A D G+ + + + D NDN PKF + F++ EN S VG + V D D ++ + L S P F+I N + + +T S DREK+ ++F++ A D G+P S + + V+D+NDN P + P+ ++ +L+PR S ++ E I+ L SE D +F I EG I +E IG H + + V + G +++ V++ ++ + N +E GL+ H+ ++ E
Sbjct: 179 VGALFAIPVATDRDSGSNGIADYALTTGPEAT--NLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSAL-LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSL---HQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSK----SSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQ--LRSASETGNDRKRKYF-LQTTTLLDYERIKEYRIEIVA---VDSGNPALSSTNSLKVQVTDMNDNAPVFS----PTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPE-GLFEINPNTGEVRVMSQLDRE----QLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQL-SVEPDNGKFMI---QNGTYTILSTISFDREKESTYSFRLKAVDG-GDPPRSSYVGITINVLDENDNAPYVTKPANSS-----YKFLDPR------TSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRI-SSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNETIG--NVSHVE-------GLVGHSLYTPLE 830 HSP 2 Score: 100.138 bits (248), Expect = 8.945e-21 Identity = 140/543 (25.78%), Postives = 228/543 (41.99%), Query Frame = 1
Query: 853 IRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLS-ATDPDEGINGKIIYKFDPRFKTGALILDYFSIN--EDSGE----IYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ---EILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYF---------GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSL--AQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFT 2415
I I+DENDN PQFSSP+ + E + + + ATD D G NG Y TG + FS+ +DS E + + LD E + + + V+ +PP S+A + I++ + D NV +Y S +++ V + ++D+ + + Q ++ L+S D + + I +DRE+I + + K++ SS A + I +KDQNDNAP++ G +I E+ GT V + D+DEGEN VT + + S ET K K + + L + I + A D G S+ + + + D+NDN P F+ + E N V ++ D D + L S +P + + + LDRE+ + F V A D G P+ T TV V+V+D+NDN P + N + V + P + M V+ ND D+ E ++ +E ++ F I TI +
Sbjct: 152 IEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYA----LTTGPEATNLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPP-----RQSSALLRITITDAND-----NVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSI-DRNTGI----IFVKGSVDREEISILKFYVQAKDN-GPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDV--PFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTY-SITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADK-GVPSLRGTATVVVKVLDRNDNDPKFML---NGYSFSVQENMPPLSPVGM-VTVNDHDE-GENARVQLSVEPDNGKFMIQNGTYTILS 665
BLAST of Protocadherin-9 vs. Ensembl Xenopus
Match: ENSXETT00000027070.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:19099783:19110965:-1 gene:ENSXETG00000013163.1 transcript:ENSXETT00000027070.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 185.267 bits (469), Expect = 2.819e-47 Identity = 192/682 (28.15%), Postives = 309/682 (45.31%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTV----TSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAF---PSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD---INLVLRS--KNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHV---ISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNIN 2577
+G L A D D GNN +++YK+S D L +NT EL + K LDRE N L A DGG T KTG+ I I + D NDN P F+ Y+ V E + ++ L ATD DEG N +I Y F+ + + F+IN ++G + + LDYE T ++ V A + V S + I V +V D +I + ++ I E+++ +A+V + + + ++ I L LIS YK + T+ ++DREK + + I ++ + ++S I +I+ D NDNAP I EN G +++ A D D ENG+V + + P Y+SI GV+ + D E L +F + A D G + + I + + DVNDN P F + I ENN S + D D++++ + ++L ++ + ++ + + + + RS D E +F QV+A DS G+P+ S TV + + DQNDN P I++PSQ++ V I + + Y V A D D + + YHL D I + G I R++ ++D I + V + GY + S+V +N+V+ A + P I N +I+
Sbjct: 151 VGTHFALGSAKDPDLGNNSIQSYKLSAN-----DYFGMLEKVNTDGRKYPELVLEKTLDREKKNSSVLILSAFDGG-TPSKTGTSLIRIVVTDINDNYPLFNKDTYRVTVSENVPIGFLVIDLHATDADEGSNAEITYLFNDIPENAQ---EVFAINPENGSVQITGKLDYEVATNYEMTVEAKDGGGLV------SYCKLLIQVSDVNDNAPDILITSFSDI---IPEDSRVGTVIALVNLDDLDSGENGEVVGQISESLP-----FHLISSSGNYYK-----LVTSMDLDREKTSEYNITIKAEDKGSPQL-TNSKTIRLILTDVNDNAPVFDKMDYVAYIQENNPSGNSFYRVHATDPDINENGKVVYMILTDIIEDIPISSYVSINTVSGVLYAQRSFDYEK-LREF-----YIQAEDKGSPQLTNNKTIRLILTDVNDNAPVFEKMDYVAYIQENNPSGSSFFRVHATDSDINENGKVVYMILTDIIEDMPLSSYISINTVSGVLY--AQRSFDYESLREFYIQVMAKDS-GSPSRSANATVKICITDQNDNAPKILYPSQDSEAASVFEFIPHFSTKGYLVTKVVAVDAD-SGHNAWLSYHLLQVPDPSFLIIGQNTGEIRITRDLQETDALRQRIVVMVKDNGYPMLSSTVTLNLVV-AENFQQVLPEITNQHID 792
BLAST of Protocadherin-9 vs. Ensembl Xenopus
Match: vapa (VAMP associated protein A [Source:Xenbase;Acc:XB-GENE-990155]) HSP 1 Score: 181.8 bits (460), Expect = 5.732e-46 Identity = 180/645 (27.91%), Postives = 300/645 (46.51%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P A D D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + + L F++N +G I +++PLD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E I + S I+ + D+ PS +A + + ++D+NDN P F P S+ EN + G + + A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I D D ++ + L ++N + P+ L K+N S DRE+ + F V A D G P S T V + ++D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + + +D+G H + + + + GY
Sbjct: 163 IPSAVDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNKPVFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQVTSATKRL--FALNNTTGLITVQRPLDREETAVHKLTVLATDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNSKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGIKEFSFKIV---AADTGKPSLNQTALVRVELEDENDNPP---IFSQPVIELSVSENNRRGLYLTTVSASDEDSGKNSDIVYQLG----PNASFFDLDRKTGVLTASRVFDREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITATDSDAGENKAVTLSILNDNENFVLDPYSGLIKSN--------VSFDREQQSSYTFDVKAVDG-GQPPRSSTAKVTINIMDANDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDTD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPSAADVGLHRLVVNISDLGY 760 HSP 2 Score: 102.449 bits (254), Expect = 2.652e-21 Identity = 108/389 (27.76%), Postives = 176/389 (45.24%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + + + L ++ T G+I V+ +D E + + V ATD P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A D+ G P+ + T V VE+ D+NDN PI P S+NN R TVSA+D+D + + + I Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNKPVFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQVTSATKRLFALNNTTGLITVQRPLDREETAVH----KLTVLATDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPINTKIALITVSDKDT--DVNSKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGIKEFSFKIVAADT-GKPSLNQTALVRVELEDENDNPPIFSQPVIELSVSENNR----------RGLYLTTVSASDED-SGKNSDIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 90.1225 bits (222), Expect = 1.613e-17 Identity = 127/500 (25.40%), Postives = 211/500 (42.20%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ IG ++ ATD D G+N Y Q F LN NT +TV+ +PLDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +N K+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P + + S+ E N+ ++ V+ + +++ I +L L K+ + ++ DRE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I A D D GEN VT S+ E + G+IK D E Q ++ T V A D G P+S+ +++I I D NDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQVTSATKRLFALN--NTTGLITVQ----RPLDREETAVHKLTVLATDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPINT-KIALITVSDKDTDVNSKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGIKEFSFKIVAADTGKPS----LNQTALVRVELEDENDNPPIFSQPVI---ELSVSENNRRGLYLTTVSASDEDSGKNSDIVYQLGPNASFFDL--------DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITATDSDAGENKAVTLSILNDN----ENFVLDPYSGLIKSNVSFDRE----QQSSYTFDVKAVDGGQPPRSSTAKVTINIMDANDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDTD 706 HSP 4 Score: 73.9442 bits (180), Expect = 1.336e-12 Identity = 105/354 (29.66%), Postives = 152/354 (42.94%), Query Frame = 1
Query: 1372 ILSLISKGDESYKVK----SFEI-RTNQEIDREKIPKISTNILCKESVDSH------------VPS---SSAKIEIIIKDQNDNAPTL-TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
+ L+SK +S VK + EI T+ IDREK LC S +S +P+ KI+II+KD NDNAP + SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F S + I EN + V ++ D D+ + +I + ++ + R+F LN T R LDRE+ V+ATD P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 63 VYRLVSKAGDSPLVKVSSSTGEIFTTSTRIDREK--------LCAGSSNSDENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSTVINISIPENTLINSRFPIPSAVDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNKPVFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQ--------VTSATKRLFALNNTTGLITVQRPLDREETAVHKLTVLATDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPINTKIALITVSDKD 392 HSP 5 Score: 73.559 bits (179), Expect = 1.571e-12 Identity = 127/582 (21.82%), Postives = 240/582 (41.24%), Query Frame = 1
Query: 841 INIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPT--LTYF-----GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VIDASTAKSNSPRI 2559
I I I + D NDN P F S + + E L + R SA DPD G NG Y+ L + E ++ +++ LD E++ + + + P +STA ++++V +V D N + + ++V + + + D+ + + + ++ S +K + + I + +DRE+ +L + D + A + I + D NDN P L Y GT + E T + I DKD N +V +E+ ++ + +++ S++D E + +F + + A D G + + + ++D NDN P F+ + ++ ENN + ++ + D+D + ++V + A F L + + L +R DRE+ +F F V A D+ G P V V V+D+NDN P + N+ V L P+ ++A D D E + + ++++ F +D G I + + + + + G S+ +V + ++DA+ NSP +
Sbjct: 126 IKIKIIVKDTNDNAPMFPSTVINISIPENTLINSRFPIPSAVDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQK----SSTAILQVTVSDVND-----NKPVFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQVTS-ATKRLFALNNTTGLITVQRPLDREETAVHKLTVL---ATDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNSKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYE-GIKEF---SFKIVAADTGKPSLNQTALVRVELEDENDNPPIFSQPVIELSVSENNRRGLYLTTVSASDEDSGKNSDIVYQLGPNAS--FFDLDRKTGV--LTASRVFDREEQERFIFTVTARDN-GTPPLQSQAAVIVTVLDENDNSPKF---THNHFQFFVSENL-PKYSTVGVITATDSD-AGENKAVTLSILNDNENFVLDPYSGLIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINIMDAN---DNSPVV 675
BLAST of Protocadherin-9 vs. Ensembl Xenopus
Match: ENSXETT00000039600.1 (protocadherin alpha 5 [Source:NCBI gene;Acc:100125046]) HSP 1 Score: 173.326 bits (438), Expect = 8.468e-44 Identity = 180/658 (27.36%), Postives = 303/658 (46.05%), Query Frame = 1
Query: 313 LKSSKAHSYFTI--KNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLN-TLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFD----PRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKS---AFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPK----FTSSHMIFTIM--ENNMKNSFVGEIEVEDKDVHDDINLVLRSKN-PAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP 2223
+ S YF + KN LF N ++D +++C + C + + I D + I + + ++ NDNYPIF + ++ I+ES G L A D D G N V Y++S +++F L+V + T S +V+L + K LDRE ++ L+A DGG+ + GS + I + D NDN P F IY+ ++ L +++++ATD DEG NGK+ Y F+ P+ ++ F+I E +G I +DYEK++ ++ V A++ P V +++++V D P E+ V L N + E++ + VA+++V +++D + C + + I IS Y + + + +DRE+ + +I + D P+ S I++ I D NDN P+ S+ EN PG+ V+ + A D D G+N +T+S+ S P Y+S+ +G I D E Q + ATD G+ P S++L + I I+D+NDN P F+SS T M + K V +I+ D D + + KN P PF I I + + D ++ F + G+P S T+ + ++D P
Sbjct: 67 ISSKDGSDYFQVNLKNGILFVNRMIDREALCPEISVCIVQLEVIVDKPVQIHHVDVEIEDI------------NDNYPIFPAKEYKLLIAESRLPGSNFPLEGAVDSDVGTNSVTVYELSS------NDNFALDVQSYTHESKSVQLVLKKSLDREQIPFHNITLIAFDGGKP-KLNGSAQLLITVQDVNDNAPVFEQSIYRASLLENALVGTFVIKVNATDLDEGENGKLKYSFNKLVPPQTRS------VFNIEEHTGIIRSFGEVDYEKKSLYEIEVDAIDKGP----YAIAGHCKVIVNIVDVNDNPPEMTVTSL---NVPVPEDSPTGTVVAVISVHDRDSDQNGKVTCHIS--KNIPFKISPTLREY----YSLTVDGPLDRERTSEYELDI---TATDGGAPALSVTKSIKVQISDVNDNPPSFQKSSEIISVKENNPPGSHVYTVSASDSDTGQNSFITYSLSASFLDGIPISSYISVNPENGKIFALLSFDHE----QVCYFQCQIIATDAGLPPMSSNLTLHIFIEDINDNAPSALAPFSSSESAVTEMVPRSFKKGQVVTKIKAIDPDSGYNAWISYEVKNLPRNSPFSIGHHTGEITIMRSFIDSDSDQHKLF----VELKDHGDPQMSAMVTLIILLVDPEHELP 675 HSP 2 Score: 104.375 bits (259), Expect = 4.445e-22 Identity = 157/586 (26.79%), Postives = 254/586 (43.34%), Query Frame = 1
Query: 844 NIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH-FQEILSLISKGDESYKVKSFEIRTNQEIDREK--IPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSA----FPSL-EYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKAN----RIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYK----FMTVSANDQDQTSEFNT-IEYHLES--ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
++ + I D NDN P F + YK + E L A D D G N +Y+ AL + ++ S ++ LKK LD E+ F +IA + P +A + I+V +V D N Y S++E FV V T DL +L++ F +++ ++ + + + IR+ E+D EK + +I + + K + + K+ + I D NDN P T+T P + E++ GTVV I D+D +NG+VT + K+ P+L EY S+ DG + + + E + +TATD G S I + I DVNDN P F S I ++ ENN S V + D D + I L + +P N +IF L S D E+ F Q+IATD+ G P S T+ + + D NDN P + P ++ + ++ + PR++K + A D D S +N I Y +++ + F I G I R SD +H + + + + G M + V + +++
Sbjct: 119 HVDVEIEDINDNYPIFPAKEYKLLIAESRLPGSNFPLEGAVDSDVGTNSVTVYELSSN-DNFALDVQSYTHESKSVQLVLKKSLDREQIPFHNITLIAFDGGKP----KLNGSAQLLITVQDVND-----NAPVFEQSIYRASLLENALVGTFVIKVNAT----DLDEGENGKLKYSFNKLVPPQTRSVFNIEEHTGIIRSFGEVDYEKKSLYEIEVDAIDK---GPYAIAGHCKVIVNIVDVNDNPPEMTVTSLNVP-VPEDSPTGTVVAVISVHDRDSDQNGKVTCHISKNIPFKISPTLREYYSL-TVDGPLDRERTSEYE----------LDITATDGGAPALSVTKSIKVQISDVNDNPPSFQKSSEIISVKENNPPGSHVYTVSASDSDTGQNSFITYSLSASFLDGIPISSYISVNPENGKIFAL---LSFDHEQVCYFQCQIIATDA-GLPPMSSNLTLHIFIEDINDNAPSALAPFSSSES--AVTEMVPRSFKKGQVVTKIKAIDPD--SGYNAWISYEVKNLPRNSPFSIGHHTGEITIMRSFIDSDSDQHKLFVELKDHGDPQMSAMVTLIILL 667
BLAST of Protocadherin-9 vs. Ensembl Xenopus
Match: atp5pd (ATP synthase peripheral stalk subunit d [Source:Xenbase;Acc:XB-GENE-993879]) HSP 1 Score: 172.94 bits (437), Expect = 1.658e-43 Identity = 177/660 (26.82%), Postives = 310/660 (46.97%), Query Frame = 1
Query: 319 SSKAHSYFTI--KNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLN-TLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS-----FEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTLTYFGTPSIL--ENTKPGTVVFKIIAQDKDEGENGRVTFSMEKS---AFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPK----FTSSHMIFTIM--ENNMKNSFVGEIEVEDKDVHDDINLVLRSKN-PAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII 2229
S YF + +N +F N ++D + +C + C + + I D + I + + ++ +PIF+ +++ISE + G + L A D D G N V Y++S +++F L+V + T S +V+L + KPLDRE ++ L+A DGG+ + +G+ + I + D NDN P F+ IY+ ++ L +++++ATD DEG N K+ Y F+ + FSI E++G I + +D+EK+ ++ V A++ + V ++VL+V D P E+++ L N + E++K VAI+ V K++ ++C++ + +K+ S + + + +D E I + + +I+ ++D PS S I+I I D NDN P+ + G +I EN PG+ V+ + A D D G+N +T+S+ S P Y+SI +G I D E Q + ATD G+ S++L + I I+D+NDN P F S+ T M ++ V +I+ D D + + + K+ P PF I ++ I TRSL + D +F V+A D G P + + + D ++ I+
Sbjct: 67 SKDGSEYFQVNLQNGIIFVNRVIDREMLCPEISICIVQLEVILDKPVQIHHVDVEIEDINDN------------FPIFSSTEFKLQISEMRQSGSRLPLEGAVDADIGTNSVTGYELS------LNDYFSLDVQSYTHESKSVQLVLRKPLDREQIPLHNITLIAFDGGKP-KLSGTTQLLITVQDINDNAPVFNEEIYRASLLENALKGTIVIKVNATDLDEGENSKLTYAFNRLVPQHVRTI--FSIEENTGIIRVVGEVDFEKKNLYEIEVNAIDRGHRAMV----GHCKVLVNVLDVNDNPPEMSITSL---NLPVSEDSKVGTVVAIINVHDKDSGQNGKVKCQI-----------STNVPFKIASTLREYYSLIVDGPLDHESISEYNFDII---AIDEGFPSLSVTKSIKIQISDVNDNRPSF-HQGAETIFIKENNPPGSHVYTVTASDADTGQNSFITYSLSDSSIDGIPMSSYISINPENGKIYALMSFDHE----QIIYFQCQIIATDAGLPHLSSNLTLHIFIEDINDNAPSALAPFYSTEPAVTEMVPRSSKVGQLVTKIKAVDPDSGYNAWISYKLKDLPRNSPFSIGRQNGEII---ITRSL-MDSDDEFRLFVVAEDH-GEPAMTALTQIIISFKDSGEDTQIV 674 HSP 2 Score: 97.0561 bits (240), Expect = 9.627e-20 Identity = 157/567 (27.69%), Postives = 232/567 (40.92%), Query Frame = 1
Query: 844 NIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRL-SATDPDEGINGKIIYKFDPRFKTGALILDYFSIN-------EDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVT---SKENDLFRSIQCRL--EHFQEILSLISKGDESYKVKSFEIRTNQEIDREK--IPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSME-----KSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLP---FVILKKAN-RIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKF--MTVSANDQDQTSEFNT-IEYHLES--ESDVFDIDRQEGTIFTRREMAKSD 2439
++ + I D NDN P FSS +K + E S L L A D D G N Y+ + DYFS++ S ++ L+KPLD E+ +IA + P + T + I+V ++ D N N + Y S++E V V T EN RL +H + I S+ +E+ + IR E+D EK + +I N + + K+ + + D NDN P ++T P + E++K GTVV I DKD G+NG+V + K A EY S+ I+D + + A D G S I I I DVNDN P F I ENN S V + D D + I L + +P ++ + N +I+ L S D E+ F Q+IATD+ G P S T+ + + D NDN P + P +T ++ + PR+ K + D S +N I Y L+ + F I RQ G I R + SD
Sbjct: 117 HVDVEIEDINDNFPIFSSTEFKLQISEMRQSGSRLPLEGAVDADIGTNSVTGYELS--------LNDYFSLDVQSYTHESKSVQLVLRKPLDREQIPLHNITLIAFDGGKPK----LSGTTQLLITVQDIND-----NAPVFNEEIYRASLLENALKGTIVIKVNATDLDEGENSKLTYAFNRLVPQHVRTIFSI----EENTGI----IRVVGEVDFEKKNLYEIEVNAIDR---GHRAMVGHCKVLVNVLDVNDNPPEMSITSLNLP-VSEDSKVGTVVAIINVHDKDSGQNGKVKCQISTNVPFKIASTLREYYSL-----------IVDGPLDHESISEYNFDIIAIDEGFPSLSVTKSIKIQISDVNDNRPSFHQGAETIFIKENNPPGSHVYTVTASDADTGQNSFITYSLSDSSIDGIPMSSYISINPENGKIYAL---MSFDHEQIIYFQCQIIATDA-GLPHLSSNLTLHIFIEDINDNAPSALAPFY--STEPAVTEMVPRSSKVGQLVTKIKAVDPDSGYNAWISYKLKDLPRNSPFSIGRQNGEIIITRSLMDSD 637 HSP 3 Score: 53.9138 bits (128), Expect = 1.542e-6 Identity = 102/369 (27.64%), Postives = 160/369 (43.36%), Query Frame = 1
Query: 1165 LYTSTASVEISVLNVYDEPLEINVDY-LNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKI-PKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKV--KSIIDCESSLAQFTTLTIVVTATDHGIKPK-STDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFH-------LNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP 2223
LY S V+ ++L V+ L++ D L +Y + EE+K FV + DL I I+S G E ++V ++ I N+ IDRE + P+IS I+ E + P +++ I+D NDN P T F I E + G+ + A D D G N + + + + SL+ S +++ + +D E Q I + A D G KPK S Q+ IT+QD+NDN P F +++EN +K + V I+V D+ + N L ++P + IF + +D EK + +V A D G+ V V V+D NDN P
Sbjct: 1 LYLSWDQVQGTILMVFFM-LQMAADLVLCQLHYMVPEESKHGTFVGRLA-----QDLGLQINDMNARRPRIIS--KDGSEYFQVNLQNGIIFVNRVIDREMLCPEISICIVQLEVILDK-PVQIHHVDVEIEDINDNFPIFSSTEFKL-QISEMRQSGSRLPLEGAVDADIGTNSVTGYELSLNDYFSLDVQSYTHESKSVQLVLRKPLDRE----QIPLHNITLIAFDGG-KPKLSGTTQLLITVQDINDNAPVFNEEIYRASLLENALKGTIV--IKVNATDLDEGENSKLTYAFNRLVP----QHVRTIFSIEENTGIIRVVGEVDFEKKNLYEIEVNAIDR-GHRAMVGHCKVLVNVLDVNDNPP 347
BLAST of Protocadherin-9 vs. Ensembl Xenopus
Match: ENSXETT00000029153.1 (protocadherin 8 [Source:NCBI gene;Acc:100485587]) HSP 1 Score: 172.555 bits (436), Expect = 4.797e-43 Identity = 132/454 (29.07%), Postives = 228/454 (50.22%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-SPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIA--VNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYS---IVEENKSNFFVAIVTVTSKENDLFRSIQCRL---EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSM---EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVP 1899
+G I L +ATD+D G N +++++IS ++HF ++V + V +L + K LDRE+ + Y+ +L+A+DGG + ++G+ + +R++D NDN P F S + E +++ +L L+A DPDEG+NG+IIY F P+ + F I+ SG + L+ +D+E + ++F V A + P P +T V + V++V D I++ L + + I E FVA+++ T +++ + C L EHF + ++Y+ S+ I T +DREKI + + ++ E + S + + I + D+NDNAP F P S+LEN PG + ++A+D D G NG+V + + E P Y+S+ G + + E L + + A+D G ++ I + I D NDN P
Sbjct: 143 VGTRIPLDIATDEDVGVNSIQSFQIS------VNSHFSIDVQTRADGVKYADLVLMKELDRESQSAYTLELLAMDGG-SPSRSGTAMVNVRVLDFNDNSPVFERSAVTVELMEDAPVGYLLLDLNAVDPDEGVNGEIIYGFSPQVPQE--VRQLFKIDPKSGRLTLEGQVDFESKQTYEFDVQAQDMGPNP------LAATCKVIVHVIDVNDNAPVISITPLTSISAGVAYITEAAARESFVALISTTDRDSGQNGQVHCTLYGHEHF--------RLQQAYE-DSYMIVTTSALDREKISEYNLTVVA-EDLGSPPFKTVKQYTIRVSDENDNAPV---FAKPVYEVSVLENNAPGAYITTVVARDPDFGHNGKVIYRLVETEVMGAPISTYVSLDPATGAVYALRTFNHEI----LKQLDLRIQASDGGSPQLTSSAIIKVKIVDQNDNAP 564 HSP 2 Score: 97.0561 bits (240), Expect = 1.152e-19 Identity = 140/642 (21.81%), Postives = 279/642 (43.46%), Query Frame = 1
Query: 739 ELKVFKPLDRETTNKYS------FDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDS-------GEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-----EPLEINVDYLNNK--NYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-------FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLP-----FVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVH-VISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL-ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKIT--VFNPGYTSMKSSVQVNVVIDASTAKSN 2547
+L + + +DRE K S D++++ ++ I++ + + D NDN P+F S+ I E + RI ATD D G+N ++ + +FSI+ + ++ L K LD E Q+ + ++A++ P + TA V + VL+ D E + V+ + + Y +++ N A+ ++ ++ QE+ L +K+ KS + ++D E ++ ++ + + +++ K+ + + D NDNAP ++ G I E + V I D+D G+NG+V ++ L+ E +I S +D E + + + V A D G P T Q +I + D NDN P F +++ENN +++ + D D + ++ R ++ +V L A + R+ + E + + ++ A+D G+P + + + V+++DQNDN P+II P+ +N + V+ P + + A D D+ + Y L E ++F I++ G +F +++++ +G HV ++T V + G + S+ + ++ ++T N
Sbjct: 76 QLSIGERIDRERICKQSPHCTLALDVVSL----AKEQFKLIHVEVEVRDINDNSPRFPSAEIPVEVSESATVGTRIPLDIATDEDVGVNSIQSFQIS--------VNSHFSIDVQTRADGVKYADLVLMKELDRESQSAYTLELLAMDGGSPS----RSGTAMVNVRVLDFNDNSPVFERSAVTVELMEDAPVGYLLLDLN------AVDPDEGVNGEIIYGFSPQVP--QEVRQL-------FKIDPKSGRLTLEGQVDFESKQTYEFDVQAQD-MGPNPLAATCKVIVHVIDVNDNAPVISITPLTSISAGVAYITEAAARESFVALISTTDRDSGQNGQVHCTLYGHEHFRLQQAY--EDSYMIVTTSALDRE----KISEYNLTVVAEDLGSPPFKTVKQYTIRVSDENDNAPVFAKPVYEVSVLENNAPGAYITTVVARDPDFGHNGKVIYRLVETEVMGAPISTYVSLDPATGAVY--ALRTFNHEILKQLDLRIQASDG-GSPQLTSSAIIKVKIVDQNDNAPVIIQPALSNGSAEVVVPSRAPHGFLVTQIKAKDADEGVNAE-LSYSLTEDGRNLFTINKVTGEVFLVADVSEA-VG-HVFRVTVSVSDSGRPPLSSTATITFLVTSATPPIN 673 HSP 3 Score: 62.3882 bits (150), Expect = 4.988e-9 Identity = 63/256 (24.61%), Postives = 112/256 (43.75%), Query Frame = 1
Query: 1603 ENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--------------HDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQ 2328
E +PGTV+ + EGE TF + K SL + + E+DG + + ID E Q T+ + K + + + + ++D+NDN P+F S+ + + E+ + + D+DV H I++ R+ V++K+ LDRE + +++A D G+P+ S T V+V V+D NDN P+ ++ TV ++ P Y + ++A D D+
Sbjct: 34 EEDEPGTVIGTLAEDLHLEGEG---TFRLMKQFNNSL--IHVRESDGQLSIGERIDRERICKQSPHCTLALDVVSLA-KEQFKLIHVEVEVRDINDNSPRFPSAEIPVEVSESATVGTRIPLDIATDEDVGVNSIQSFQISVNSHFSIDVQTRADGVKYADLVLMKE------------LDRESQSAYTLELLAMDG-GSPSRSGTAMVNVRVLDFNDNSPVF---ERSAVTVELMED-APVGYLLLDLNAVDPDE 266
BLAST of Protocadherin-9 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 182.57 bits (462), Expect = 2.401e-46 Identity = 188/675 (27.85%), Postives = 309/675 (45.78%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSV---RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINV---------DYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVS-ANDQDQTSEFNT-IEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTA 2538
IG +P+ATD+D G N V +Y++ Q F L V +L V LDRE + Y + DGG + + ++ + + ++D NDN P+F P Y+ + E NS ++++ A D D+G N +I Y F + ++ ++ ++G I ++ P+D E + +F V+A + T ++ A V ++V ++ D I + D + N + + EE VA+V V+ ++ ++ C + FQ L S+ K K F ++T +D EK+ + I+ VDS P SS+ +++ + D NDNAP T T + EN KPG VV ++ A D D G N + +S+E P+ + L +I +G I+VK+ +D E Q + + V A D G + + + D NDN PKF S F++MEN S VG + V D D ++ + L + N FVI I ++ S DRE+ + FQ+ A D G P S V + V+D+NDN P I PS T H + L P+ TVS +D S N + Y + + +F I G I +E+ + G H + + V + G + V++ ++ + A
Sbjct: 161 IGSLFPIPLATDRDAGPNGVASYEL--QAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSAL-LRVTVLDTNDNAPKFERPTYEAELSE--NSPIGHSVIQVKANDSDQGANAEIDYTF---HQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKD----RGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETA----VALVQVSDRDEGENAAVTCVVAGDVPFQ--LRQASETGSDSKKKYF-LQTTTPLDYEKVKDYTIEIVA---VDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPE--PAAQGLFTISPENGEIRVKTSLDRE----QRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGD---FVIQNGTGTIL---SSLSFDREQQSTYTFQLKAVDG-GVPPRSAYVGVTINVLDENDNAPFITAPSN---TSHRL--LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLA 795 HSP 2 Score: 117.472 bits (293), Expect = 4.028e-26 Identity = 145/591 (24.53%), Postives = 239/591 (40.44%), Query Frame = 1
Query: 853 IRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLS-ATDPDEGINGKIIYKFDPRFKTGALILDYFSIN------EDSGEIYLKKPLDYEKQTFFKFPV-IAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ--EILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG---------TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSL--AQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRI 2559
I + D NDN P F+SP+ + E N + + ATD D G NG Y+ + G + F + E ++ + LD E+ + + + PP S+A + ++VL+ D N Y S +++ V + ++D + + Q E++ + + D + + I +DRE + + ++L K+ + S+ A++ + +KD NDNAPT+ G +I E+ T V + D+DEGEN VT + L S ET K K + + L + TI + A D G P S+ + + + DVNDN P FT S ENN V E+ D D + LV PA + N + T SLDRE+ + +V+A D G+P+ T TV V V+D NDN P + N + + + L P +TV D+ + + ++ +E ++ F I GTI + + + ++ + G S V V I+ N+P I
Sbjct: 134 IEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYEL----QAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPP-----RASSALLRVTVLDTND-----NAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGL----ITVQGPVDREDLSTLRFSVLAKDR-GATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQAS--ETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT--SLDREQRDSYELKVVAADR-GSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSP--VGMVTVIDGDKGENAR---VQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP--PRSAYVGVTINVLDENDNAPFI 693 HSP 3 Score: 61.2326 bits (147), Expect = 7.160e-9 Identity = 65/257 (25.29%), Postives = 105/257 (40.86%), Query Frame = 1
Query: 1855 LQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPF---VILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDV----FDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAH 2598
L+ I +QD+NDN P F S + I EN S D+D + + L++ A F V + + L +LDRE+ ++ + D GNP + + + V V+D NDN P P+ +S P + + V AND DQ + I+Y +V +DR G I + + + D+ ++ +V + S + VV+ N+P IE I GL+ H
Sbjct: 130 LEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDG-GNPPRASSALLRVTVLDTNDNAPKFERPTYEAE----LSENSPIGHSVIQVKANDSDQGANAE-IDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDL--STLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIE---IRGIGLVTH 375
BLAST of Protocadherin-9 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 182.57 bits (462), Expect = 2.401e-46 Identity = 188/675 (27.85%), Postives = 309/675 (45.78%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSV---RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINV---------DYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVS-ANDQDQTSEFNT-IEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTA 2538
IG +P+ATD+D G N V +Y++ Q F L V +L V LDRE + Y + DGG + + ++ + + ++D NDN P+F P Y+ + E NS ++++ A D D+G N +I Y F + ++ ++ ++G I ++ P+D E + +F V+A + T ++ A V ++V ++ D I + D + N + + EE VA+V V+ ++ ++ C + FQ L S+ K K F ++T +D EK+ + I+ VDS P SS+ +++ + D NDNAP T T + EN KPG VV ++ A D D G N + +S+E P+ + L +I +G I+VK+ +D E Q + + V A D G + + + D NDN PKF S F++MEN S VG + V D D ++ + L + N FVI I ++ S DRE+ + FQ+ A D G P S V + V+D+NDN P I PS T H + L P+ TVS +D S N + Y + + +F I G I +E+ + G H + + V + G + V++ ++ + A
Sbjct: 161 IGSLFPIPLATDRDAGPNGVASYEL--QAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSAL-LRVTVLDTNDNAPKFERPTYEAELSE--NSPIGHSVIQVKANDSDQGANAEIDYTF---HQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKD----RGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETA----VALVQVSDRDEGENAAVTCVVAGDVPFQ--LRQASETGSDSKKKYF-LQTTTPLDYEKVKDYTIEIVA---VDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPE--PAAQGLFTISPENGEIRVKTSLDRE----QRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGD---FVIQNGTGTIL---SSLSFDREQQSTYTFQLKAVDG-GVPPRSAYVGVTINVLDENDNAPFITAPSN---TSHRL--LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLA 795 HSP 2 Score: 117.472 bits (293), Expect = 4.028e-26 Identity = 145/591 (24.53%), Postives = 239/591 (40.44%), Query Frame = 1
Query: 853 IRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLS-ATDPDEGINGKIIYKFDPRFKTGALILDYFSIN------EDSGEIYLKKPLDYEKQTFFKFPV-IAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ--EILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG---------TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSL--AQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRI 2559
I + D NDN P F+SP+ + E N + + ATD D G NG Y+ + G + F + E ++ + LD E+ + + + PP S+A + ++VL+ D N Y S +++ V + ++D + + Q E++ + + D + + I +DRE + + ++L K+ + S+ A++ + +KD NDNAPT+ G +I E+ T V + D+DEGEN VT + L S ET K K + + L + TI + A D G P S+ + + + DVNDN P FT S ENN V E+ D D + LV PA + N + T SLDRE+ + +V+A D G+P+ T TV V V+D NDN P + N + + + L P +TV D+ + + ++ +E ++ F I GTI + + + ++ + G S V V I+ N+P I
Sbjct: 134 IEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYEL----QAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPP-----RASSALLRVTVLDTND-----NAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGL----ITVQGPVDREDLSTLRFSVLAKDR-GATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQAS--ETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT--SLDREQRDSYELKVVAADR-GSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSP--VGMVTVIDGDKGENAR---VQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP--PRSAYVGVTINVLDENDNAPFI 693 HSP 3 Score: 61.2326 bits (147), Expect = 7.160e-9 Identity = 65/257 (25.29%), Postives = 105/257 (40.86%), Query Frame = 1
Query: 1855 LQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPF---VILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDV----FDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAH 2598
L+ I +QD+NDN P F S + I EN S D+D + + L++ A F V + + L +LDRE+ ++ + D GNP + + + V V+D NDN P P+ +S P + + V AND DQ + I+Y +V +DR G I + + + D+ ++ +V + S + VV+ N+P IE I GL+ H
Sbjct: 130 LEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDG-GNPPRASSALLRVTVLDTNDNAPKFERPTYEAE----LSENSPIGHSVIQVKANDSDQGANAE-IDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDL--STLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIE---IRGIGLVTH 375
BLAST of Protocadherin-9 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 182.185 bits (461), Expect = 3.438e-46 Identity = 188/675 (27.85%), Postives = 310/675 (45.93%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSV---RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINV---------DYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVS-ANDQDQTSEFNT-IEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTA 2538
IG +P+ATD+D G N V +Y++ Q F L V +L V LDRE + Y + DGG + + ++ + + ++D NDN P+F P Y+ + E NS ++++ A D D+G N +I Y F + ++ ++ ++G I ++ P+D E + +F V+A + T ++ A V ++V ++ D I + D + N + + EE VA+V V+ ++ ++ C + FQ L S+ K K F ++T +D EK+ + I+ +VDS P SS+ +++ + D NDNAP T T + EN KPG VV ++ A D D G N + +S+E P+ + L +I +G I+VK+ +D E Q + + V A D G + + + D NDN PKF S F++MEN S VG + V D D ++ + L + N FVI I ++ S DRE+ + FQ+ A D G P S V + V+D+NDN P I PS T H + L P+ TVS +D S N + Y + + +F I G I +E+ + G H + + V + G + V++ ++ + A
Sbjct: 22 IGSLFPIPLATDRDAGPNGVASYEL--QAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSAL-LRVTVLDTNDNAPKFERPTYEAELSE--NSPIGHSVIQVKANDSDQGANAEIDYTF---HQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKD----RGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETA----VALVQVSDRDEGENAAVTCVVAGDVPFQ--LRQASETGSDSKKKYF-LQTTTPLDYEKVKDYTIEIV---AVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPE--PAAQGLFTISPENGEIRVKTSLDRE----QRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGD---FVIQNGTGTIL---SSLSFDREQQSTYTFQLKAVDG-GVPPRSAYVGVTINVLDENDNAPFITAPSN---TSHRL--LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLA 656 HSP 2 Score: 114.005 bits (284), Expect = 5.306e-25 Identity = 144/578 (24.91%), Postives = 236/578 (40.83%), Query Frame = 1
Query: 871 NDNMPQFSSPIYKEFVKEGLNSVRILRLS-ATDPDEGINGKIIYKFDPRFKTGALILDYFSIN--EDSGEIYLKKP-------LDYEKQTFFKFPV-IAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ--EILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG---------TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSL--AQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VID 2526
NDN P F+SP+ + E N + + ATD D G NG Y+ + G + F + ED E K+P LD E+ + + + PP S+A + ++VL+ D N Y S +++ V + ++D + + Q E++ + + D + + I +DRE + + ++L K+ + S+ A++ + +KD NDNAPT+ G +I E+ T V + D+DEGEN VT + L S ET K K + + L + TI + A D G P S+ + + + DVNDN P FT S ENN V E+ D D + LV PA + N + T SLDRE+ + +V+A D G+P+ T TV V V+D NDN P + N + + + L P +TV D+ + + ++ +E ++ F I GTI + + + ++ + G + V V + V+D
Sbjct: 1 NDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYEL----QAGPEAQELFGLQVAEDQEE---KQPQLIVMGNLDRERWDSYDLTIKVQDGGNPP-----RASSALLRVTVLDTND-----NAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGL----ITVQGPVDREDLSTLRFSVLAKDR-GATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQAS--ETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT--SLDREQRDSYELKVVAADR-GSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSP--VGMVTVIDGDKGENAR---VQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLD 546
BLAST of Protocadherin-9 vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 178.333 bits (451), Expect = 6.923e-45 Identity = 183/645 (28.37%), Postives = 300/645 (46.51%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + + E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D+D ++ + L ++N + P+ + K+N S DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 163 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPPI---FNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFNREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNENFVLDPYSGVIKSN--------VSFDREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDID-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 760 HSP 2 Score: 103.99 bits (258), Expect = 6.558e-22 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 88.9669 bits (219), Expect = 2.983e-17 Identity = 127/500 (25.40%), Postives = 213/500 (42.60%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ +RE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D+D GEN VT S+ E + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDID 706 HSP 4 Score: 75.8702 bits (185), Expect = 2.901e-13 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 127 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 392
BLAST of Protocadherin-9 vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 177.948 bits (450), Expect = 7.227e-45 Identity = 183/645 (28.37%), Postives = 300/645 (46.51%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + + E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D+D ++ + L ++N + P+ + K+N S DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 40 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPP---IFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFNREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNENFVLDPYSGVIKSN--------VSFDREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDID-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 637 HSP 2 Score: 103.605 bits (257), Expect = 7.634e-22 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 85 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 448 HSP 3 Score: 88.5817 bits (218), Expect = 3.047e-17 Identity = 119/467 (25.48%), Postives = 199/467 (42.61%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVP 1899
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ +RE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D+D GEN VT S+ E + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P
Sbjct: 127 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSP 550 HSP 4 Score: 75.8702 bits (185), Expect = 2.886e-13 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 4 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 269
BLAST of Protocadherin-9 vs. UniProt/SwissProt
Match: sp|Q5DRF2|PCDAC_PANTR (Protocadherin alpha-12 OS=Pan troglodytes OX=9598 GN=PCDHA12 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.454e-45 Identity = 181/685 (26.42%), Postives = 309/685 (45.11%), Query Frame = 1
Query: 223 VINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFT---IKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLN-SVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL-EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTPS----ILENTKPGTVVFKIIAQDKDEGENGRVTFSM-----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF------TSSHMIFTIMENNM-KNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVID 2205
V I+ D L +L +L+P+ +SK H ++N LF N+ +D + +C EC + I D + + + + ++ P+F ER ++ +SES + L A+D D G N + TY +S E HF L + + S+ EL + K LDRE T K + LM IDGG+ + TGS+ I I ++D NDN P F P YK + E + N R+++L+A+DPDEG+NG+I Y + FSIN D+GEI + LD+E+ ++ V A++ I + V + VL+V D E+ V L + + E+ + +A+++V+ +++ + C L H L+S +YK + + + +DRE +S L + D PS ++A++ + + D NDNAP F P + EN PG +F + A D D +N V++S+ + A S Y+S+ G + +D E + L V+A D G+ P +++ + + + D NDN P ++ + ++ ++ V ++ D D + L + A+ + ++TTR LD P+ V+ D G P + T TV V +++
Sbjct: 45 VGRIAQDLGL-----ELAELVPRL-----FRVASKRHGDLLEVNLQNGILFVNSRIDREKLCGRSAECSIHLEVIVDRPLQVFHVDVEVKDINDNP------------PVFREREQKVPVSESAPLDSHFPLEGASDADIGVNSLLTYALSLNE------HFELKIKTKKDKSILPELVLRKLLDREQTPKLNLLLMVIDGGKP-ELTGSVQIQITVLDVNDNGPAFDKPSYKVVLSENVQNDTRVIQLNASDPDEGLNGEISYGIKMILPVSEKCM--FSINPDTGEIRIYGELDFEENNAYEIQVNAIDK----GIPSMAGHSMVLVEVLDVNDNVPEVMVTSL---SLPVQEDAQVGTVIALISVSDRDSGANGQVICSLTPHVP--FKLVS----TYK-NYYSLVLDSALDRE---SVSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPA---FAQPEYTVFVKENNPPGCHIFTVSAWDADAQKNALVSYSLVERRVGEHALSS--YVSVHAESGKVYALQPLDHE----ELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATPAGSAGGAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAVGAHIPFHVGLYTGEISTTRILDEADAPRHRLLVLVKDH-GEPALTSTATVLVSLVE 671 HSP 2 Score: 96.6709 bits (239), Expect = 7.654e-19 Identity = 148/618 (23.95%), Postives = 262/618 (42.39%), Query Frame = 1
Query: 823 DQKTGSINIAIRIIDENDNMPQF-----------SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYK------FDPRFKTGALILDYFSINEDSG---EIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH-FQEILSLISKGDESYKVKSFEIRTNQEIDREK--IPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDI----NLVLRSKNP-AMLPFV-ILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQ--DQTSEFNT-IEYHLESESD----VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKS--SVQVNVVIDASTAKSNS 2550
D+ ++ + + D NDN P F S+P+ F EG A+D D G+N + Y F+ + KT +D E+ L+K LD E+ ++ ++ P T + ++I+VL+V D N + +Y +V ++ + + + D + + + + IL + K S + EIR E+D E+ +I N ++D +PS + ++++ D NDN P +T P + E+ + GTV+ I D+D G NG+V S+ + +S + + + S +D ES + +VVTA D G ++S+ + DVNDN P F + ENN + + D D + +LV R A+ +V + ++ +++ L + LD E+ FQV A D+ G P T+ V V+D+NDN P ++ +A +S L PR+ V A + D S +N + Y L+ + F + G I T R + ++D H + + V + G ++ S +V V++V + K++S
Sbjct: 111 DRPLQVFHVDVEVKDINDNPPVFREREQKVPVSESAPLDSHFPLEG----------ASDADIGVNSLLTYALSLNEHFELKIKT----------KKDKSILPELVLRKLLDREQTPKLNLLLMVIDGGKPE----LTGSVQIQITVLDVND-----NGPAFDKPSYKVVLSENVQNDTRVIQLNASDPD--EGLNGEISYGIKMILPVSEKCMFSINPDTGEIRIYGELDFEENNAYEIQVN-----AIDKGIPSMAGHSMVLVEVLDVNDNVPEVMVTSLSLP-VQEDAQVGTVIALISVSDRDSGANGQVICSLTPHV--PFKLVSTYKNYYSLVLDSALDRES----VSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQKNALVSYSLVERRVGEHALSSYVSVHAESGKVYAL---QPLDHEELELLQFQVSARDA-GVPPLGSNVTLQVFVLDENDNAPALLATPAGSAG-GAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAVGAHIPFHVGLYTGEISTTRILDEADAPRHRLLVLVKDHGEPALTSTATVLVSLVENGQAPKTSS 680
BLAST of Protocadherin-9 vs. UniProt/SwissProt
Match: sp|Q9HC56|PCDH9_HUMAN (Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 2.208e-44 Identity = 184/645 (28.53%), Postives = 298/645 (46.20%), Query Frame = 1
Query: 607 LPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
+P ATD D G N V+ Y++ + + F L+++ T +L V + LDRE + Y + DGG T QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N +G I +++ LD E+ K V+A + TP + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E + L + D Y + T+ +D E + S I+ DS PS +A + + ++D+NDN P F P S+ EN + G + I A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L + N + P+ + K+N F DRE+ + F V ATD G P S T V + V+D NDN P++I P N + V P + V A D D T ++Y + S ++ +F ID G I + A +D+G H + + + + GY
Sbjct: 163 IPSATDPDTGFNGVQHYELLNGQ-----SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-TPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRL--FALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--------ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIER-EVPFHLKAVYDNQYL-----LETSSLLDYEGTKEFSFKIVAS---DSGKPSLNQTALVRVKLEDENDNPP---IFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLG----PNASFFDLDRKTGVLTASRVFDREEQ----ERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSF--------DREQQSSYTFDVKATDG-GQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSV-VAEVFAVDVD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGY 760 HSP 2 Score: 103.99 bits (258), Expect = 5.272e-21 Identity = 106/389 (27.25%), Postives = 175/389 (44.99%), Query Frame = 1
Query: 1438 QEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP-SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTI------MENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP------SQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPR 2556
Q +DRE+ T ++ + D P SS+A +++ + D NDN P I EN GT V ++ A D D G N + + P+ + L ++ T G+I V+ +D E + + V A+D P + I++T DVNDN P ++I I E + N+ + I V DKD D+N + +PF + + + L T+ LD E +F+F+++A+DS G P+ + T V V++ D+NDN PI P S+NN R T+SA D+D + + Y L + FD+DR+ G + R + + + +T + G ++S Q V++ NSP+
Sbjct: 208 QNLDREQK---DTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIH----KVTVLASDGSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDT--DVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDS-GKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNR----------RGLYLTTISATDEDSGKNADIV-YQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQS--QAAVIVTVLDENDNSPK 571 HSP 3 Score: 89.3521 bits (220), Expect = 1.497e-16 Identity = 127/500 (25.40%), Postives = 212/500 (42.40%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS--SHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E +E+ I E+ +G ++ ATD D G+N Y Q F LN NT +TV+ + LDRE T + ++A DG T + + I + D NDN P SPI K+ +N+ +I ++ +D D +NGK+I F + ++ ++ + LDYE F F ++A + P TA V + + + D P N + S+ E N+ ++ ++ T +++ I +L L K+ + ++ DRE+ + + +++ + S +A I + + D+NDN+P T +F + EN + V I D D GEN VT S+ + + GVIK D E Q ++ T V ATD G P+S+ +++I + DVNDN P S S+ F ++ + + S V E+ D D
Sbjct: 250 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN--NTTGLITVQ----RSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNT-KIALITVSDKDTDVNGKVIC-----FIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS----LNQTALVRVKLEDENDNPPIFNQPVI---ELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL--------DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVI-VTVLDENDNSPKFTHNHFQFF----VSENLPKYSTVGVITVTDADAGENKAVTLSILNDN----DNFVLDPYSGVIKSNVSFDRE----QQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVD 706 HSP 4 Score: 75.8702 bits (185), Expect = 2.107e-12 Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 1
Query: 1528 KIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
KI+II+KD NDNAP F +P SI ENT + A D D G NG + + S+ L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + I EN + V ++ D D+ + +I + ++ + R+F LN T RSLDRE+ V+A+D P + TV + V D NDN P II P N TV+ +S +P N K ++ +D+D
Sbjct: 127 KIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQ--SVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--------VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARA---TVTINVTDVNDNPPNIDLRYIISPI--NGTVY-LSEKDPVNTKIALITVSDKD 392
BLAST of Protocadherin-9 vs. UniProt/SwissProt
Match: sp|Q5DRF1|PCDAD_PANTR (Protocadherin alpha-13 OS=Pan troglodytes OX=9598 GN=PCDHA13 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.453e-44 Identity = 187/697 (26.83%), Postives = 318/697 (45.62%), Query Frame = 1
Query: 223 VINISDDTALNIKLYDLKKLIPQTKMTYHLLK-SSKAHSYF---TIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICD-----FSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRL-EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTPS----ILENTKPGTVVFKIIAQDKDEGENGRVTFSM-----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF---TSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDIN--------LVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQN 2211
V I+ D L +L +L+P+ L + +SK H ++N LF N+ +D + +C EC + I D F + + R+ ++ PIF E I ++ES L A+D D G N TY++ +P +++F L+ N+L ++ + L + K LDRE ++S L A DGG+ + TG++ + I I+D NDN P+F +YK V E N +++L+ATDPD+G NG I+Y F R ++ F+IN ++GEI K LD+E++ ++ V AV+ I + ++ + VL+V D E+ + L + I E+ + + +A+++V+ +++ + C L H L+S +YK + + + +DRE +S L + D PS ++A + + + D NDNAP F P + EN PG +F + AQD D EN V++S+ + A S Y+S+ G + +D E + L V+A D G+ P +++ + + + D NDN P + T+ E ++ G + V+ + V D L L + A +PF + I +TTR LD P V+ D G P + T TV + +++
Sbjct: 45 VGRIAQDLGL-----ELAELVPR------LFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGRSAECSVHLEVIVDRPLQVFHVEVKVRDINDNP-----------------PIFPESKKRIIVAESRPPETRFPLDGASDADIGVNSALTYRL---DP---NDYFTLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKP-ELTGTVQLLITILDVNDNAPEFYQSVYKVTVLENAFNGTLVIKLNATDPDDGTNGDIVYSF--RRPVSPAVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVDKG---NIPM-AGHCTLLVEVLDVNDNAPEVTITSL---SLPIREDTQPSAIIALISVSDRDSGSNGQVTCTLTPHVP--FKLVS----TYK-NYYSLVLDSALDRE---SVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPA---FAQPEYTVFVKENNPPGCHIFTVSAQDADAQENALVSYSLVERRVGERALSS--YVSVHAESGKVYALQPLDHE----ELELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPALLTPGAGSAGGTVSELMPRSVGAGHVVVKVRAVDADSGYNAWLSYELQLAAVG-ARIPFCVGLYTGEI---STTRPLDEVDAPHHRLLVLVKDH-GEPALTATATVLLSLVESG 673 HSP 2 Score: 109.768 bits (273), Expect = 7.408e-23 Identity = 152/613 (24.80%), Postives = 258/613 (42.09%), Query Frame = 1
Query: 844 NIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINE-------DSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ-------EILSLISKGDESYKVKSF-------EIRTNQEIDRE--KIPKISTNILCKESVD-SHVP-SSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDI----NLVLRS-KNPAMLPFV-ILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPR--NYKFMTVSANDQDQTSEFNT-IEYHLE----SESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VIDASTAKSNSPR 2556
++ +++ D NDN P F + V E R A+D D G+N + Y+ DP DYF+++ S + L+K LD E+ + A + P T T + I++L+V D N F+ ++ VT EN ++ +L +I+ + V +F EIRT ++D E K+ +IS E+VD ++P + + + + D NDNAP T+T P I E+T+P ++ I D+D G NG+VT ++ + +S + + + S +D ES + +VVTA D G +S+ + DVNDN P F + ENN + + +D D ++ +LV R A+ +V + ++ +++ L + LD E+ FQV A DS G P T+ V V+D+NDN P ++ P +A +S L PR + V D S +N + Y L+ F + G I T R + + D H + + V + G ++ ++ V + ++++ A S R
Sbjct: 118 HVEVKVRDINDNPPIFPESKKRIIVAESRPPETRFPLDGASDADIGVNSALTYRLDPN--------DYFTLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPE----LTGTVQLLITILDVND--------------------NAPEFYQSVYKVTVLENAFNGTLVIKLNATDPDDGTNGDIVYSFRRPVSPAVVYAFTINPNNGEIRTKGKLDFEEKKLYEISV-----EAVDKGNIPMAGHCTLLVEVLDVNDNAPEVTITSLSLP-IREDTQPSAIIALISVSDRDSGSNGQVTCTLTPHV--PFKLVSTYKNYYSLVLDSALDRES----VSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAQDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYAL---QPLDHEELELLQFQVSARDS-GVPPLGSNVTLQVFVLDENDNAPALLTPGAGSAG-GTVSELMPRSVGAGHVVVKVRAVDADSGYNAWLSYELQLAAVGARIPFCVGLYTGEISTTRPLDEVDAPHHRLLVLVKDHGEPALTATATVLLSLVESGQAPQASSR 681 HSP 3 Score: 70.0922 bits (170), Expect = 9.764e-11 Identity = 90/352 (25.57%), Postives = 148/352 (42.05%), Query Frame = 1
Query: 1255 NYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHV--------PSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKI-IAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVV----------------TATDHGIKPKSTD-LQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL---RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP 2223
+YS+ EE K FV + DL + + + S +++ + N IDRE+ LC S + V P +E+ ++D NDN P I+ ++P F + A D D G N +T+ ++ + +Y ++ D ++SL Q ++L++V+ TA+D G KP+ T +Q+ ITI DVNDN P+F S T++EN + V ++ D D + ++V R +PA++ + N + T LD E+ + V A D GN + T+ VEV+D NDN P
Sbjct: 32 HYSVPEEAKHGTFVGRIA-----QDLGLELAELVPRLFRVASKTHGDLLEVNLQNGILFVNSRIDREE--------LCGRSAECSVHLEVIVDRPLQVFHVEVKVRDINDNPPIFPESKKRIIVAESRPPETRFPLDGASDADIGVNSALTYRLDPN-----DYFTL-------------DAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGG-KPELTGTVQLLITILDVNDNAPEFYQSVYKVTVLENAFNGTLVIKLNATDPDDGTNGDIVYSFRRPVSPAVVYAFTINPNNG--EIRTKGKLDFEEKKLYEISVEAVDK-GNIPMAGHCTLLVEVLDVNDNAP 348
BLAST of Protocadherin-9 vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.958e-44 Identity = 188/660 (28.48%), Postives = 302/660 (45.76%), Query Frame = 1
Query: 604 TLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNK--NYSIVEEN-KSNFFVAIVTVTSKENDLFRSIQCRLEH-----FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSA-NDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYT-SMKSSVQVNVVIDAS 2532
TLP A D D G N V+ Y++ + + N F L+V+ T + +L V K LDRE + Y + DGG Q++ + + + + D NDN P F + + E + +L ATD D G N KI + F A L F +N +G I +K+PLD E+ K V+A + L + A V ++V +V D I++ Y+ N + ++ EN N +A++TVT K+ D + C +H + + S F + T +D E + + +L ++ + + SA + I +KD+NDNAP T F T SI EN PG + K+ A D D G N + + + A P S+ G++ V +D E T + A D+G+ P ++++ + ++I D NDN P FT + F + EN ++ VG I V D D D+ + L + +N F I + I S DREK + F V A D G + S + V + V+D NDN P+ I P N + V+ P F ++ ND +E + Y + + D+F ID++ G I + +D+G H + + + G S+ S V VN+ ++ S
Sbjct: 159 TLPAAVDPDVGTNGVQNYELIKSQ-----NIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGG-FPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRL--FHLNATTGLITIKEPLDREETPNHKLLVLASDGG------LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFS-----------NQFLLETAAYLDYESTKEYAIKLLAADAGKPPL-NQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEF---SLDRRTGMLTVVKKLDREKEDKYLFT----ILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDD---FTIDSQTGVI---RPNISFDREKQESYTFYVKAEDG-GRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAE---VRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNES 775 HSP 2 Score: 72.0182 bits (175), Expect = 3.017e-11 Identity = 124/481 (25.78%), Postives = 195/481 (40.54%), Query Frame = 1
Query: 535 YPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFVKE---GLNSVRILRLSATDPDEGINGKIIYKFDPR--FKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTN-----QEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLTY----FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM--EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF 1905
+P+F E IE+ I E+ +G ++T ATD D G N + S F LN L + + +PLDRE T + ++A DGG + + + + D NDN+P +P+ V LN+ +I ++ TD D NG++ D F+ + + F + + LDYE + ++A + PP+ +A + I V + D ++ SI E N + V+ T ++ I L G ++ S + RT +++DREK K IL K D+ VP ++ + + + DQNDN+P T+ F P EN V I D D G+N VT S+ E F +I GVI+ D E + T V A D G +S+ +++I + DVNDN P F
Sbjct: 246 HPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGL------ITIKEPLDREETPNHKLLVLASDGGLMPARA---MVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNT-KIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAY-------LDYESTKEYAIKLLAADAGKPPL-----NQSAMLFIKVKDENDNAPVFTQSFV---TVSIPENNSPGIQLTKVSATDADSGPNAEINYLL------------GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK---DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVP---ENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDF------TIDSQTGVIRPNISFDREKQ----ESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVF 673
BLAST of Protocadherin-9 vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.252e-44 Identity = 188/660 (28.48%), Postives = 302/660 (45.76%), Query Frame = 1
Query: 604 TLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNK--NYSIVEEN-KSNFFVAIVTVTSKENDLFRSIQCRLEH-----FQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSA-NDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYT-SMKSSVQVNVVIDAS 2532
TLP A D D G N V+ Y++ + + N F L+V+ T + +L V K LDRE + Y + DGG Q++ + + + + D NDN P F + + E + +L ATD D G N KI + F A L F +N +G I +K+PLD E+ K V+A + L + A V ++V +V D I++ Y+ N + ++ EN N +A++TVT K+ D + C +H + + S F + T +D E + + +L ++ + + SA + I +KD+NDNAP T F T SI EN PG + K+ A D D G N + + + A P S+ G++ V +D E T + A D+G+ P ++++ + ++I D NDN P FT + F + EN ++ VG I V D D D+ + L + +N F I + I S DREK + F V A D G + S + V + V+D NDN P+ I P N + V+ P F ++ ND +E + Y + + D+F ID++ G I + +D+G H + + + G S+ S V VN+ ++ S
Sbjct: 159 TLPAAVDPDVGTNGVQNYELIKSQ-----NIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGG-FPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRL--FHLNATTGLITIKEPLDREETPNHKLLVLASDGG------LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFS-----------NQFLLETAAYLDYESTKEYAIKLLAADAGKPPL-NQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEF---SLDRRTGMLTVVKKLDREKEDKYLFT----ILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDD---FTIDSQTGVI---RPNISFDREKQESYTFYVKAEDG-GRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAE---VRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNES 775 HSP 2 Score: 72.0182 bits (175), Expect = 3.148e-11 Identity = 124/481 (25.78%), Postives = 195/481 (40.54%), Query Frame = 1
Query: 535 YPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFVKE---GLNSVRILRLSATDPDEGINGKIIYKFDPR--FKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTN-----QEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLTY----FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM--EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF 1905
+P+F E IE+ I E+ +G ++T ATD D G N + S F LN L + + +PLDRE T + ++A DGG + + + + D NDN+P +P+ V LN+ +I ++ TD D NG++ D F+ + + F + + LDYE + ++A + PP+ +A + I V + D ++ SI E N + V+ T ++ I L G ++ S + RT +++DREK K IL K D+ VP ++ + + + DQNDN+P T+ F P EN V I D D G+N VT S+ E F +I GVI+ D E + T V A D G +S+ +++I + DVNDN P F
Sbjct: 246 HPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGL------ITIKEPLDREETPNHKLLVLASDGGLMPARA---MVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNT-KIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAY-------LDYESTKEYAIKLLAADAGKPPL-----NQSAMLFIKVKDENDNAPVFTQSFV---TVSIPENNSPGIQLTKVSATDADSGPNAEINYLL------------GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK---DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVP---ENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDF------TIDSQTGVIRPNISFDREKQ----ESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVF 673
BLAST of Protocadherin-9 vs. TrEMBL
Match: A0A0R3UIX6 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS7416 PE=4 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 9.114e-68 Identity = 236/799 (29.54%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTF-----------DNHFRLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGS------INIAIRIIDENDNMPQFSSPIYKEFVKEGLN--------------------SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAV---------NPTPPVTI----TLYTSTASVEISVLNVYDEPLEINVDYLNNK--------NYSIVEENKSNF-FVAIVTVTSKENDLFRSIQCRLEHFQEILS----LISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVD--------------------SHVP-SSSAKIEIIIKDQNDNAPTLT-------YFGT--------PSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFP-----SLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKAN-----------RIFHLNTTRSLDREKDPKFNFQVIATDSLGN------PTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSE---FNTIEYHLESE----------------------SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKS 2544
IG LP+A D D V Y P + + R + ++ N +T + LK+ KPLD E Y+F + A+DG + ++ T + +++ I + D NDN P F P K + N IL+L A D D N KI Y F P T + +YF ++ SG ++L+KPLDYE QT F F V A NPT + TL+T+TA V I+V++ DE I VD+++N Y+ VEEN F+A + T ++ L + C + S L SK + F++ EI R++I ++ +L +E++D P +SS + I ++D+NDNAP + +G P + EN G++V ++ A D DEGENGR+++S+EK+ P + I E G I + ID E+ + +T+ V +D+G+ PKS +I I I+D NDN P F F +MEN VGEI V DKD +I L + LPF I + + +F LNTTR LDRE + F F ++ATD T + T TV+V V ++NDN P+IIFP + N T + +S E +N++ +T++AND+D + F ++ +E+ SD DI+ G +F R+M D G H+ K+ V + G SS+ V++D S+ +S
Sbjct: 169 IGTKFPLPLARDPDTSQYSVSAYTAEPGLPPEWSLVVETSGSGEEMSMRPKMGSSTNKITGLYLKLQKPLDHEKRKNYTFKIRALDGLEANEITPTGNRKDILHVFIYVEDINDNGPVF-RPREKSYSGVPTNVQLSDWMVTYTATVPESKWIKDPILKLEADDLDGPANSKIHYYFAP--ATSKQVREYFKLDSVSGYLFLRKPLDYELQTEFSFRVTATDVKEESLRGNPTQSQPVQSPSTLHTATAQVVITVIDTNDETPAIEVDFISNGPSKSPLMTKYAEVEENAPPPQFIASIQATDRDAGLSGQVNCIQQPVVNPSSIKAGLWSKPTAAENSSQFQL---DEI-RQEIGRVQYRLLTREALDREDTENGGAYRQVKIICTDAGQPPRTSSTFVNIRVRDENDNAPKIILRQPPDYLYGLESSETDMWPFVFENAPVGSLVTRVNASDLDEGENGRLSYSIEKTEQPDDTVNPFNFFQINEKTGDITTRIEIDREAFEPPLSCVTLKVKVSDNGVPPKSATQEIKIYIRDENDNGPVFQRQEYQFHVMENLPAGYAVGEILVTDKD-EGEIKLGFGMQPHGPLPFTIWQSPSGADNEHKPYSMTLFILNTTRPLDREAEHAFRFTLLATDGPSGYGRSRIGTATATATVEVFVENENDNDPVIIFPQKQNKTFY-LSCHEKKNFELLTINANDKDPSENPHIFELVKSAIEARMINQSSTSNFTKEEGEAGSFRVSDFLDIEPTTGIVFLSRDMKSEDKGVHIFKVQVTDGGVPPRSSSITFFVLVDNSSPRS 958
BLAST of Protocadherin-9 vs. TrEMBL
Match: A0A0R3TSV2 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS10747 PE=4 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 1.052e-66 Identity = 237/799 (29.66%), Postives = 358/799 (44.81%), Query Frame = 1
Query: 586 KIGHTITLPVATDKDFGNNQVETYKISRQEPRTF-----------DNHFRLNVLNTLNSVTVE------LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSIN------IAIRIIDENDNMPQF---SSPIYKEFVKEGLNSV----------------RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-------------PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNK--------NYSIVEENKSNF-FVAIVTVTSKENDLFRSIQCRLEHFQEIL----------SLISKGDESYKVKSFEIR-----------TNQEIDREKIPKIST----NILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL--------TYFGTPS-------ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFP-----SLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANR-----------IFHLNTTRSLDREKDPKFNFQVIATDSLGNPT----NSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQT------------SEFNTIEYHLESE----------SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKS 2544
++G LP+A+D D V Y + P + DN+ V ++ S +V LK+ KPLD ET K+SF + A+DG + ++ +N + I + D NDN P F P K +N+ IL+L A D D N K+ Y F P T + +YF++N +G ++L+KPLDYE Q+ + F VIA + P + ++ +TA V I+V + DE EI +D+++++ Y+ +EEN F+A + T ++ + + C Q++L S S S + EIR T + +DRE I I+C + + +SSA + I I+D+NDNAPT+ Y PS + EN G+++ ++ A D DEGENGR+TFS P L I G I K ID E+ +++ + V A+D+G+ PKS I I I+D NDN P F S F +MEN VG+I V DKD +I L LPF I + F LNTTR LDRE + F F +IATD S T TV++ V ++NDN P+IIFP + N T + +S+ E +N++ +T++AND+D + S+ I Y E+E SD DI+ G +F R+M D G H+ K+ V + G SS+ V++D S+ ++
Sbjct: 170 EVGARFPLPLASDPDTRQFSVNAYVAEPEMPSEWSLVTETSGGETDNYIFSKVSPSMISSSVHKITGLYLKLQKPLDHETKMKFSFKIRALDGSEANEYAPVVNRKDILQVYIYVEDINDNGPVFRPQGKPYPVAPPKAQINNWIITYTATVPESKWIKDPILKLVADDRDGPANSKVGYYFAP--ATSKHVQEYFTLNPLNGYLFLRKPLDYELQSEYSFRVIATDMPEDNLRVGIVHGQVSPSSSNIHIATAQVVITVTDTNDEAPEIEIDFISSEPNASPMATKYAEIEENAPPPQFIASIQATDRDAGMSGQVSCAQ---QQVLNPSSSLWPRPSQTSMNTSSSPFQLDEIRQENGRVQYRLLTREALDREDIENGGAYRQVKIVCTD-MGRPPRASSAFVNIRIRDKNDNAPTINLRRPTDFMYSLKPSDGDKWPYVYENAPVGSLITRLNASDLDEGENGRLTFSFVADELPIGSVNPLTLFQINAKTGDITTKVEIDREAYDPPLSSVLLRVKASDNGVPPKSATQDIRIYIRDENDNWPVFQRSEYQFHVMENLDAGYAVGDILVTDKD-EGEIKLTFGMHTYGPLPFTIWSCPYQDDGEHGSYSIYRFILNTTRPLDREVESAFKFTLIATDGGTGQGKSKFGSATATVEIIVENENDNDPVIIFPQKQNKTFY-LSWREKKNFELLTINANDKDPSENPHIFELMKGMSDVQLINYSKENETKKDAEFTLSSDFLDIEPTTGIVFLSRDMRAEDKGIHIFKVQVTDAGVPPRSSSITFFVLVDDSSPRT 960
BLAST of Protocadherin-9 vs. TrEMBL
Match: U6IWT9 (Protocadherin 11 OS=Echinococcus granulosus OX=6210 GN=EGR_01638 PE=4 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 9.017e-65 Identity = 229/789 (29.02%), Postives = 367/789 (46.51%), Query Frame = 1
Query: 586 KIGHTITLPVATDKDFGNNQVETYKISRQEPRTF---------DNHF---RLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQ------KTGSINIAIRIIDENDNMPQFSSPIYKEFV----KEGLNSVR----------------ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIA------------VNPTP-PVTITLYTSTASVEISVLNVYDEPLEINVDYLNNK--------NYSIVEENKSNF-FVAIVTVTSKENDLFRSIQCRLEHFQEIL----SLISKGDESYKVK---------SFEIRTNQEIDREKIPKIST----NILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-------FGT--------PSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPS-----LEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRI-----------FHLNTTRSLDREKDPKFNFQVIATDSLGNPTNS----VTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTS------------EFNTIEYHLESE----------SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSN 2547
++G LP+A D D V Y + P + + +F +++ ++ N +T + LK+ K LD ET K++F + A+DG + + + + + I + D NDN P F P K + K L++ IL+L A D D N K+ Y F P T + ++F++N +G ++L+KPLDYE Q+ + F VIA V+ P + +L+T+TA V I+V + DE EI VD+++++ Y+ +EEN + F+A + T ++ L + C + + + I+ + +++ + + T + +DRE + I+C + + +SS ++I I+D+NDN PT+ +G P + EN G++V ++ A D DEGEN R+TFS PS L I E G I ID E+ +++ + V +D+G PKS ++ I I D NDN P F + F +MEN VGEI V DKD +I L ++ LPF I R F LNTTR LDRE + KF F ++ATD G + S T TV++ V ++NDN P+IIFP + N T + +S+ E +N++ +T++AND+D + + I Y E+E SD DI+ G IF R+M + D G HV K+ V + G SS+ V++D S+ +S+
Sbjct: 169 EVGARFPLPLARDPDTRQYSVNAYVADSEIPSEWSLVTETASGEENFIYSKVSPSSSFNRITGLYLKLQKSLDYETKKKFTFKIRALDGSEVNDFAPIGNRKDVLQVYIYVEDINDNGPVFR-PQRKSYSLTPSKAQLSNWMVTYTATVPESKWIKDPILKLVADDLDGPANSKVGYYFAP--ATSKQVQEHFNLNPLNGYLFLRKPLDYELQSEYSFRVIATDMPEESPRSGMVHGQPFQTSPSLHTATAQVVITVTDTNDEAPEIEVDFISSEPNTSPLAIKYAEIEENAAPPQFIASIQATDRDGGLSGQVSCVQQPVMALWLRPTTAINSTNSPFQLDEIRQENGRVQYRLLTRKALDREDMENGGAYRQVKIICAD-MGQPPRTSSTFVKIRIRDKNDNTPTINLRRSADYAYGLKSIEGDKWPFVFENAPVGSLVTRLNASDLDEGENSRLTFSFVADEPPSGTISPLSLFQINEKTGDITTCMDIDREAYDPPLSSVVLKVKVSDNGTPPKSATQEVRIHILDENDNDPVFQRTEYQFHMMENLPTGYAVGEILVTDKD-EGEIKLSFGMQSYGPLPFTIWPSPFRSGIEHGAYSMTRFILNTTRPLDREVEHKFKFTLLATDGPGGHSKSRAGTATATVEIVVENENDNDPVIIFPQKQNKTFY-LSWREKKNFELLTINANDKDPSENPHIFDLMRGPLDIQMINYSSENETKKDAEVIQSSDFLDIEPTTGIIFLSRDMREEDKGVHVFKVQVTDAGVPPRSSSITFFVLVDDSSPRSS 951
BLAST of Protocadherin-9 vs. TrEMBL
Match: A0A0R3X140 (Uncharacterized protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS6873 PE=4 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 7.224e-64 Identity = 228/791 (28.82%), Postives = 360/791 (45.51%), Query Frame = 1
Query: 586 KIGHTITLPVATDKDFGNNQVETYKISRQEPRTF---------DNHF----RLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQ------KTGSINIAIRIIDENDNMPQF--------SSPIYKEFVKEGLNSVR-----------ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVI-----------AVNPTPPVTIT--LYTSTASVEISVLNVYDEPLEINVDYLNNK--------NYSIVEENK-SNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS----------------FEIRTNQEIDREKIPKIST----NILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-------FGT--------PSILENTKPGTVVFKIIAQDKDEGENGRVTFSM-----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVI----LKKAN-------RIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTG----TVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTS------------EFNTIEYHLESE----------SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKS 2544
++G LP+A D D V Y + P + + +F + + N +T + LK+ KPLD ET K++F + A+DG + ++ K + I I + D NDN P F S+P + + IL+L A D D N K+ Y F T + +YF++N +G ++L+KPLDYE Q+ F F VI AV + P + L+T+TA V I+V + DE EI VD+++++ Y+ +EEN F+A + T ++ L + C Q ++ L K + + S + + T + +DRE + I+C + + +SS + I I+D+NDN PT+ +G P + EN G++V ++ A D DEGENGR+TFS + A L + E G I ID E+ +++ + V +D+G P+ T +I + I D NDN P F + F +MEN VGEI V DKD ++ L ++ LPF I L N F LNTTR LDRE + F F ++ATD G + S +G T+++ V ++NDN P+IIFP + N T + +S+ E +N++ +T++AND+D + + I Y E+E SD DI+ G +F R+M + D G HV K+ V + G +S+ V++D S+ +S
Sbjct: 169 EVGSRFPLPLARDPDTRQYSVNAYMADPEIPSEWALVTETANGEENFIYSKLSSSTSPSNRITGLYLKLQKPLDHETKKKFAFKIRALDGSEMNEITPISNKKDILQIYIYVEDVNDNGPVFRPQRKSYSSTPTKAQLANWIVTYTATVPESRWIKDPILKLVADDMDGPANSKVGYYF--AAATSKQVQEYFNLNPLNGYLFLRKPLDYELQSEFSFRVIATDMPEESSRSAVAHSHPFQTSSNLHTATAQVVITVTDTNDEAPEIEVDFISSEPNTSPLAIKYAEIEENALPPQFIASIQATDRDAGLSGQVSCVQ---QPVMVLWPKPTTAMNITSSPFQLDEIRQENGRVQYRLLTREALDREDMESGGAYRQVKIICTD-MGRPPRTSSTFVNIRIRDKNDNTPTINLKPLADQVYGLKSLEGDKWPFVYENAPVGSLVTRLNATDLDEGENGRLTFSFIADEPQSGAISPLSLFQVNEKTGDITTSMEIDREAYDPPLSSVVLQVKVSDNGTPPRFTTQEIRVYILDENDNDPVFQRTDYQFHVMENLPSGYAVGEILVTDKD-EGEVKLSFGMQSYGPLPFTISPSQLHGENDHNAYSMTRFILNTTRPLDREVEHNFKFTLLATDGFGGHSRSRSGTATATIEIFVENENDNDPVIIFPQKQNKTFY-LSWREKKNFELLTINANDKDPSENPHIFDLIKGRLDVQMINYSSENETKKIAEITQSSDFLDIEPTTGIVFLSRDMREEDKGVHVFKVQVTDAGVPPRSTSITFFVLVDDSSPRS 951
BLAST of Protocadherin-9 vs. TrEMBL
Match: A0A0R3SLI4 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS5797 PE=4 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 7.269e-64 Identity = 231/797 (28.98%), Postives = 358/797 (44.92%), Query Frame = 1
Query: 586 KIGHTITLPVATDKDFGNNQVETYKISRQEPRTF-----------DNHFRLNVLNTL-----NSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQ------KTGSINIAIRIIDENDNMPQFSS-----PI-------------YKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-------------PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN--------NKNYSIVEENKSNF-FVAIVTVTSKENDLFRSIQCRLEH-FQEILSLISKG------------------DESYKVKSFEIRTNQEIDREKIPKIST----NILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-------FGT--------PSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFP-----SLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANR-----------IFHLNTTRSLDREKDPKFNFQVIATDSL----GNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQT------------SEFNTIEYHLESE----------SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKS 2544
++G LP+A+D D V Y + P + DN+ V ++ N +T + LK+ KPLD ET K+SF + A+DG ++++ + + + I + D NDN P F P+ Y V E IL+L D D N K+ Y F P T + +YF++N +G ++L+KPLDYE Q+ + F VIA + P + ++T+TA V I+V + DE EI VD+++ Y+ +EEN F+A + T ++ + + C + F SL + E+ +V+ + + T + +DRE I+C + + +SS + I I+D+NDNAPT+ +G P + EN G++V ++ A D DEG+NGR+TFS P L I E G I K ID E+ +++ + V +D+G+ PKS + I I+D NDN P F + F IMEN GEI V DKD +I L LPF I + + F LNTTR LDRE + F F +IATD + S T TV+V V ++NDN P+IIFP + N T + +S+ E +N++ +T++AND+D + S+ + Y E++ SD DI+ G +F R+M D G HV K+ V + G SS+ V++D S+ ++
Sbjct: 170 EVGARFPLPLASDPDTRQFSVNAYVAEPEMPSEWSLVTETSGGESDNYIFSKVSPSMVSSPANKITGLYLKLQKPLDHETKMKFSFKIRALDGSESNEYAPVSNRKDILQVYIYVEDINDNGPVFRPQGKPYPVAPPKAQISNWMVTYTATVPESKWIKDPILKLITDDIDGPANSKVSYYFAP--ATSKHVQEYFTLNPLNGYLFLRKPLDYELQSEYSFRVIATDMPEDNLRGGVIHGQVSPSSSNIHTATAQVVITVTDTNDEAPEIEVDFISIEPNASPMATKYAEIEENAPPPQFIASIQATDRDAGMSGQVSCVQQQVFNPSSSLWPRPSKSSMNISSSPFQLDEIRQENGRVQ-YRLLTREALDREDTENGGAYRQVKIICTD-MGRPPRASSTFVNIRIRDKNDNAPTINLRRPTDFIYGLKPSDGDKWPYVYENAPVGSLVTRLNASDLDEGDNGRLTFSFVADELPVGSVNPLTLFQINEKTGDITTKVEIDREAYDPPLSSVLLRVKVSDNGVPPKSATQDVRIYIRDENDNGPVFQRTEYQFQIMENLPAGYAAGEILVSDKD-EGEIKLTFGMHTYGPLPFTIWPCSYQGGGEHGSYSMYRFILNTTRPLDREVEHSFKFTLIATDGTTGQGKSKVGSATATVEVIVENENDNDPVIIFPQKQNKTFY-LSWREKKNFELLTINANDKDPSENPHIFELMKGASDTQMVNYSNENDTKKDAEFTQSSDFLDIEPTTGIVFLSRDMRAEDKGIHVFKVQVTDAGVPPRSSSIAFFVLVDDSSPRT 960
BLAST of Protocadherin-9 vs. Ensembl Cavefish
Match: ENSAMXT00000036470.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10716691:10726912:1 gene:ENSAMXG00000037804.1 transcript:ENSAMXT00000036470.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 227.639 bits (579), Expect = 5.847e-61 Identity = 232/817 (28.40%), Postives = 387/817 (47.37%), Query Frame = 1
Query: 223 VINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALIL-DYFSINEDSG-------EIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYK----VKSF--EIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLE-----YLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL-----RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHV--ISYLEPRNYKFMTVSANDQDQTSEFNT-IEYHLESE--SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNI 2574
V N++ D LNI + DL + +M + ++ S K+ ++K LF +D +++C + +C + + + + E ++ P+F + I+E +G TLP+A D D G+N V+ YK+S E +F LNV N +S +VEL + K LDRET + L AIDGG+ +G+ IAI I+D NDN P FS +YK VKE ++L LSATD DEG+N +I Y + G L +YFS+N SG ++ L+K LD EKQ + + A++ P + T + I+V++V D N + + Y S++E V + T + L I + SLIS G E + + S EI +DRE + ++ S +S K+ I + D ND+ P ++ T ++ E+ GT V I D D G+NG V+ ++ + +L+ Y S+ V +D E + Q++ + + ATD G P S+ + +++ I DVNDN P+F+ +F + EN+ + + + +D DV+++ +V ++ + + + V + + + + +S + E+ F F+V ATDS G P S TV+V ++D+NDN P+I+ P +++ I Y Y V A D D S +N + YH+ +++F I G I T+R M+ +D+ H + ITV + G S+ ++V V+VV+ A + S P + I
Sbjct: 44 VGNVAKD--LNINVQDL-----EARM-FRIVSSRKSFD-VSLKTGALFVTDRIDREALCSTIKKCSMHIEAMAQNPLKLFRIEVHIMDINDNA------------PLFPVSKQILNITELSAVGEKFTLPLAEDPDTGSNAVKNYKLSPNE------YFSLNVQNGEDSGSVELVLQKALDRETQSVIHLILTAIDGGKP-PLSGTTEIAILILDVNDNSPVFSQSLYKVKVKENAAFGTKVLSLSATDLDEGLNSEITYAI---IRQGTLSANEYFSLNVQSGGEQNISPQLVLQKALDREKQATVQLILTALDGGRP----HRSGTLDLSINVIDVND-----NTPAFSKEMYKVSVLENTLPGTPVIKLNATDLDAGLNGEI---------VYSLISHGKEKWADIFAINSITGEITVKGPLDREDTAAFELHAQAQDK-GSSPRASHCKVLIEVLDVNDSPPVISVTSLTSTVREDATTGTAVGLITIADNDIGKNGEVSAKVKGTGPFALQASYKNYYSL-------VVNGPLDRED-MPQYS---VTILATDKGTPPLSSSIVLAVDIADVNDNAPRFSDIVTVFYVKENSPSGNIIATVTAQDPDVNENAQIVYSLINRKNMDSSWMSMVDINPVSGDIY--SKQSFNYEEVKSFQFKVQATDS-GAPPLSSNVTVNVFIVDENDNRPVILPPYSEAGSLNTENIPYSAEAGYFVGKVRAIDAD--SGYNALLSYHITEPKGNNLFRIGSSSGEIRTKRRMSDNDLKTHPLVITVCDHGEPSLSATVSVDVVV-AESMDSVRPSLREVQI 793
BLAST of Protocadherin-9 vs. Ensembl Cavefish
Match: ENSAMXT00000049785.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10740740:10748152:1 gene:ENSAMXG00000032814.1 transcript:ENSAMXT00000049785.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 181.03 bits (458), Expect = 2.509e-46 Identity = 205/687 (29.84%), Postives = 333/687 (48.47%), Query Frame = 1
Query: 199 IKKNTCMEVINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLN-TLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSM--------EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHM-IFTIMENNMKNS-----FVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILK-KANRIFHLNTTRSLDREK------DPKFNFQVIATDSLGNPTNSVT 2178
+KK T V N++ D LN+ + +L Q++M + S+K + +K LF N +D + +C+ +K+ C +I + ++ + +++++ D NDN P F + I E+V G +LP+A D D G N +++Y +S E HF L+V + SV+ EL + KPLDRE + L A+DGG+ K+ +++I + ++D NDN P FS P+YK VKE L +I+ ++ATD DEG NG+I+Y + A L FSINE +GEI +K +DYE+ + + A + + +TL V I V +V D EI V L + SI E+ K VA++TVT K++ + C++ + SYK S+ + N+ +DRE + + + ++ + + SS+A I + I D NDN+P F P S+ EN+ G ++ I A D D GEN V++S+ + S ++ YL+ GE + ++S E+ QF V ATD GI S+++ +++ I D NDN P + + T+ N+ S FVG+I D D S A+L + I + K N +F + ++ R K D K + V+ G P+ S T
Sbjct: 36 VKKGTV--VGNLAKD--LNVDVQEL-----QSRMLQVVAGSNKRYFDVNLKTGVLFVNDRLDREELCE--------SKQKCSLNIEVMA----QNPIKLYRVEVNVADINDNSPFFPLETLVKNIIENVVPGDRFSLPLARDLDVGMNSLKSYTLSPNE------HFSLDVQSYGEQSVSAELVLQKPLDREKQSIVKLKLTAVDGGKP-AKSATMDIIVNVLDINDNNPVFSKPLYKIKVKENLPFGTKIITVAATDSDEGTNGEIMYSLVEQDGNSASRL--FSINEVNGEISVKGNIDYEENPAIELRIQAQDKSSSPRLTL----CKVLIEVEDVNDNAPEILVTLLRS---SISEDIKPGADVALITVTDKDDGKNGKVDCKIVGTSPF-----RLQLSYK-NSYSLIVNEPLDRELVSQYNITVIASDEGSPSL-SSTAVITVHISDVNDNSPV---FQAPVIHISVKENSPVGGLLATITAHDSDIGENAHVSYSLIDGESSRTQVSTLMNINYLT-GE---LYSLQSFNYEETKQIQFK-----VQATDAGIPALSSNVTVNVFILDENDNRPVILAPYSEAGTVNTENIPYSAEAGYFVGKIRAVDAD----------SGYNALLSYHITEPKGNNLFRVGSSSGEIRTKRRMSDNDLKTHPLVLTVSDHGEPSLSAT 656 HSP 2 Score: 134.035 bits (336), Expect = 2.007e-31 Identity = 159/571 (27.85%), Postives = 263/571 (46.06%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQFS-SPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDS--GEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISK-GDESYKVKSF-----EIRTNQEIDREKIPKISTNILCKESVDSHVPSSS-AKIEIIIKDQNDNAP-TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRI-FHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHV--ISYLEPRNYKFMTVSANDQDQTSEFNT-IEYHLESE--SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSS 2502
+ + + D NDN P F + K ++ + R A D D G+N Y P LD S E S E+ L+KPLD EKQ+ K + AV+ P ++T + ++VL++ D N + Y I + F I+TV + ++D + + + SL+ + G+ + ++ S EI ID E+ P I I ++ S P + K+ I ++D NDNAP L SI E+ KPG V I DKD+G+NG+V + ++ P LS + +I V +D E ++Q+ I V A+D G S+ I++ I DVNDN P F + + ++ EN+ + I D D+ ++ ++ L + L N + L + +S + E+ + F+V ATD+ G P S TV+V ++D+NDN P+I+ P TV+ I Y Y + A D D S +N + YH+ +++F + G I T+R M+ +D+ H + +TV + G S+ ++
Sbjct: 116 VEVNVADINDNSPFFPLETLVKNIIENVVPGDRFSLPLARDLDVGMNSLKSYTLSPNEH---FSLDVQSYGEQSVSAELVLQKPLDREKQSIVKLKLTAVDGGKPAK----SATMDIIVNVLDIND-----NNPVFSKPLYKIKVKENLPFGTKIITVAATDSD-------EGTNGEIMYSLVEQDGNSASRLFSINEVNGEISVKGNIDYEENPAIELRIQAQDK--SSSPRLTLCKVLIEVEDVNDNAPEILVTLLRSSISEDIKPGADVALITVTDKDDGKNGKVDCKIVGTS-PFRLQLSYKNSYSLI-VNEPLDREL-VSQYN---ITVIASDEGSPSLSSTAVITVHISDVNDNSPVFQAPVIHISVKENSPVGGLLATITAHDSDIGENAHVSYSLIDGESSRTQVSTLMNINYLTGELYSLQSFNYEETKQIQFKVQATDA-GIPALSSNVTVNVFILDENDNRPVILAPYSEAGTVNTENIPYSAEAGYFVGKIRAVDAD--SGYNALLSYHITEPKGNNLFRVGSSSGEIRTKRRMSDNDLKTHPLVLTVSDHGEPSLSAT 656
BLAST of Protocadherin-9 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 181.03 bits (458), Expect = 4.814e-46 Identity = 226/856 (26.40%), Postives = 370/856 (43.22%), Query Frame = 1
Query: 157 MHVSYVWYLWLILFIKKNTCMEVINISDDTALNIKLYDLKKLIPQTKM------------TYHLLKSSKAHSYFTI--KNDNLFTNTL-VDMDSM--CQNVGECCNKAKEICDFSIAIA-CRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS---VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYS-----IVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYK-VKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFS 2610
M S W+L L + S ++AL LY +++ P + + HL K Y + K +FT + +D +++ C+ G+ C +F +++ +NQ +I I++ + N P F + + + E+ +G T +P ATD+D N V Y +S + F L + N +L V LDRE + Y + A+DGG T + S + + I D NDN PQF Y+ V E NS +L++ A D D G NG+I Y + + I +G I +K PLD E+ + FKF VIA + P + +ST V I V + D + + + + +S I E+ VA+V V+ K+ + C + FQ L GD S K + ++T +D E+I I+ VDS P SS+ + + + D NDN+P F P E +PG V +IA D D G N + +S+ + + I + G ++ +S +D E VTA D G+ + I + D NDN PKF S F+++EN S VG + V D D ++ + L S P + FV+ I ++ S DREK+ + F++ A D P +S G V + V+D+NDN P++ PS N++ +S L + V A D D S + Y + + ++F I +G I +E+ + G H + + V + G S + V++ ++ + SN +E GL+ H+ ++
Sbjct: 1 MDFSVGWFLLFALLVD----------SINSALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPC-----FLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNT--PQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEAS--ALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGG-TPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSE--NSPVGYSVLQVKANDSDLGPNGEIEYTI---HQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGP----SPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQ----LRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVA---VDSGNPALSSTNSLRVQVTDTNDNSPI---FSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSS-TRGLFEIDPSSGEVRARSPLDREHK----ERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQL-SVEPDVGNFVVQNGTGTIL---SSISFDREKESSYTFRLKAVDGGEPPRSSYVG-VTINVLDENDNAPVVTKPS--NSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELV-YSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETI--SNVSLVE-------GLVGHSLYT 795
BLAST of Protocadherin-9 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 181.415 bits (459), Expect = 6.034e-46 Identity = 226/856 (26.40%), Postives = 370/856 (43.22%), Query Frame = 1
Query: 157 MHVSYVWYLWLILFIKKNTCMEVINISDDTALNIKLYDLKKLIPQTKM------------TYHLLKSSKAHSYFTI--KNDNLFTNTL-VDMDSM--CQNVGECCNKAKEICDFSIAIA-CRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS---VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYS-----IVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH---FQEILSLISKGDESYK-VKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES--DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFS 2610
M S W+L L + S ++AL LY +++ P + + HL K Y + K +FT + +D +++ C+ G+ C +F +++ +NQ +I I++ + N P F + + + E+ +G T +P ATD+D N V Y +S + F L + N +L V LDRE + Y + A+DGG T + S + + I D NDN PQF Y+ V E NS +L++ A D D G NG+I Y + + I +G I +K PLD E+ + FKF VIA + P + +ST V I V + D + + + + +S I E+ VA+V V+ K+ + C + FQ L GD S K + ++T +D E+I I+ VDS P SS+ + + + D NDN+P F P E +PG V +IA D D G N + +S+ + + I + G ++ +S +D E VTA D G+ + I + D NDN PKF S F+++EN S VG + V D D ++ + L S P + FV+ I ++ S DREK+ + F++ A D P +S G V + V+D+NDN P++ PS N++ +S L + V A D D S + Y + + ++F I +G I +E+ + G H + + V + G S + V++ ++ + SN +E GL+ H+ ++
Sbjct: 37 MDFSVGWFLLFALLVD----------SINSALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPC-----FLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNT--PQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASA--LFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGG-TPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSE--NSPVGYSVLQVKANDSDLGPNGEIEYTI---HQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGP----SPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQ----LRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVA---VDSGNPALSSTNSLRVQVTDTNDNSPI---FSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSS-TRGLFEIDPSSGEVRARSPLDRE----HKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQL-SVEPDVGNFVVQNGTGTIL---SSISFDREKESSYTFRLKAVDGGEPPRSSYVG-VTINVLDENDNAPVVTKPS--NSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELV-YSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETI--SNVSLVE-------GLVGHSLYT 831
BLAST of Protocadherin-9 vs. Ensembl Cavefish
Match: ENSAMXT00000034478.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10757013:10760663:1 gene:ENSAMXG00000031253.1 transcript:ENSAMXT00000034478.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 178.718 bits (452), Expect = 1.092e-45 Identity = 194/686 (28.28%), Postives = 335/686 (48.83%), Query Frame = 1
Query: 100 WL*AILQFNVFNRNILFEKMHVSYVWYLWLILFIKKNTCMEVINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSI-AIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM---EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHM-IFTIMENNMKNS-----FVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILK-KANRIFHLNTTRSLDREK 2112
W+ A+L ++ F + +SY + +KK V N++ D LNI + +L Q++M + S+K + +K LF N D + +C+ K+ C +I A+A ++ + I+++I D NDN P+F+ + + + ISE+V G +LP+A D D G + V+ YK+S E +F ++V + S + EL + K +DRE L A DGG+ ++G++ I + ++D NDN P FS P+YK V+E +IL +SATD DEGING+++Y ++ +++ FSIN SG+I +K +DYE+ + + A + + + V I VL+V D E++V L + S+ E+ K A+VTV+ +++ + CR + +L K SYK S+ + N+ +DRE + + + I+ D +P SS+ + +++ D NDN P + ++ EN+ G ++ I AQD D+GENG+V++S+ E + +++ G + D E + + V ATD G P S+++ +++ I D NDN P S + ++ N+ S FVG+I D D S A+L + I + K N +F + ++ R K
Sbjct: 12 WIRALLLLFWWD----FSRCQISYS----ISEEVKKGAV--VGNLAKD--LNIDVQEL-----QSRMFQVVAGSNKRYFDVNLKTGVLFVNDRFDREELCER--------KQKCSLNIEAMA-----QNPLTLYRIEVNILDINDNSPVFSLQTLLLNISENVLPGDRFSLPLAHDMDVGTHAVKNYKLSANE------YFSIDVQISGESASAELVLQKAIDREKQALVKLTLTATDGGKP-PRSGTLEILVNVLDINDNYPVFSQPLYKVKVQENAAVGTKILTVSATDLDEGINGEVVYAIVGHERSS--VVNLFSINPHSGDITVKGNIDYEENAAIELRIQAHDKSH----SPRHGNCKVLIEVLDVNDNAPEVSVTLLMS---SVSEDTKPGTGFALVTVSDQDSGTSGKVDCR------VTALPFKLQSSYK-NSYSLIVNEPLDRECVSQYNVTIVAN---DEGIPPLSSTMVLHVLVSDVNDNVPLFPALVISINVQENSPAGVLLSTITAQDVDDGENGQVSYSLINGEGTGTLVSTLMNLNSLTGELYCLQSFDYEDT----KQIQFKVQATDSGTPPLSSNVTVNVFILDENDNRPVILSPYSETGSVNTENIPYSADAGYFVGKIRAIDAD----------SGYNALLSYHITEPKGNNLFCIGSSSGEIRTK 627 HSP 2 Score: 129.798 bits (325), Expect = 4.139e-30 Identity = 157/576 (27.26%), Postives = 252/576 (43.75%), Query Frame = 1
Query: 847 IAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSIN------EDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI-VEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSF-------EIRTNQEIDREKIPKISTNILCKESVDSHVPS-SSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINL---VLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHV--ISYLEPRNYKFMTVSANDQDQTSEFNT-IEYHLESE--SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKS 2499
I + I+D NDN P FS + E L R A D D G + YK +YFSI+ S E+ L+K +D EKQ K + A + P + T + ++VL++ D N + Y + V+EN + V +T DL I E++ I + S V F +I ID E+ I I + SH P + K+ I + D NDNAP ++ S+ E+TKPGT + D+D G +G+V + +A P S + +I V +D E ++Q+ + + A D GI P S+ + + + + DVNDNVP F + + + EN+ + I +D D ++ + ++ + L ++ + L +S D E + F+V ATDS G P S TV+V ++D+NDN P+I+ P +V+ I Y Y + A D D S +N + YH+ +++F I G I T+R M+ +D+ H + ITV + G S+ +
Sbjct: 117 IEVNILDINDNSPVFSLQTLLLNISENVLPGDRFSLPLAHDMDVGTHAVKNYKLSAN--------EYFSIDVQISGESASAELVLQKAIDREKQALVKLTLTATDGGKPPR----SGTLEILVNVLDIND-----NYPVFSQPLYKVKVQENAA---VGTKILTVSATDLDEGIN------GEVVYAIVGHERSSVVNLFSINPHSGDITVKGNIDYEENAAIELRIQAHDK--SHSPRHGNCKVLIEVLDVNDNAPEVSVTLLMSSVSEDTKPGTGFALVTVSDQDSGTSGKVDCRV--TALPFKLQSSYKNSYSLI-VNEPLDREC-VSQYN---VTIVANDEGIPPLSSTMVLHVLVSDVNDNVPLFPALVISINVQENSPAGVLLSTITAQDVDDGENGQVSYSLINGEGTGTLVSTLMNLNSLTGELYCLQSFDYEDTKQIQFKVQATDS-GTPPLSSNVTVNVFILDENDNRPVILSPYSETGSVNTENIPYSADAGYFVGKIRAIDAD--SGYNALLSYHITEPKGNNLFCIGSSSGEIRTKRRMSDNDLKTHPLVITVCDHGEPSLSA 654
BLAST of Protocadherin-9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 161.77 bits (408), Expect = 2.649e-40 Identity = 172/673 (25.56%), Postives = 295/673 (43.83%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQV--ETYKI-SRQE------PRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYL--NNKNYSIVEENKSNFFVAIVTVTSKE-----NDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKP-GTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN-------TTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES-ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
+G + L A D+D G N V YKI S E PR L++ T PLDRE Y+ + A DGG + ++ G + + + + D NDN P F P Y+ V E LR D G + FDP+ +G + ++PLD+E + + + A + PP++ A+ I +L+V D I YL ++ S+ E A+VTVT + +L SI E +L + G +V ++ ++DRE+IP + IL ++ S++A + + + D ND+AP + L P G+ V + A D D G N ++ +S+ L + S+ E+ G++ +D E + +++ + ++A D G +PK+ +++T+ DVND P FT + + T +EN++ FV + D D+ + N +R +P + +F L+ T +SLDRE+ ++ V A D G+P T V V V D NDN P + +P Q A+ I EP TV+A D D+ + T+ Y L + ++ F ++ G + TR + + + + +++T + G+ +S V + +
Sbjct: 37 AAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATT-----------GPLDREANPSYALAVQAEDGG-SPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALR----DLLHRGRGPLAVPFDPK----------------TGMVSTRQPLDFEARRQYTLSLRAADGGNPPLS-----GRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLH--APGVPGLRV----LKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGN--DLGWFSVDESTGLVTTDGKVDREVA----SSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGE--NGTVRYNFDPDMP----AQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDR-GSPPLGSTAKVTVVVGDLNDNHP-VFYPVQYFAS---ILENEPGGTAVTTVTATDPDRGAN-GTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITV 648 HSP 2 Score: 134.42 bits (337), Expect = 6.199e-32 Identity = 153/612 (25.00%), Postives = 278/612 (45.42%), Query Frame = 1
Query: 742 LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILR-LSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIA----VNPTPPVTITLYTSTASVEISVLNVYDEP-LEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSF--EIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPT---LTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVI--DQNDNFPIIIFPSQNNATVHV-ISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
LKV LDRE Y+ ++A D G+ ++ + ++ + + D ND+ P+F+ Y + EG + ++ ++A D D G+N K+ Y L +FS++E +G + +D E + + A P T YTS + +++L+V DEP L Y+ + VE + FV V+V++ ++DL + R + + ++ E +++ S ++ T + +DRE++ + L ++ D P S+AK+ +++ D NDN P + YF SILEN GT V + A D D G NG V + + + G + + +D E + + VTA D G + ++IT+ D D P F F + EN + VG + D++ ++ ++ S + F I RIF N ++DRE+ + +V+A + V G V V+ D N++ P+ + A+ V I+ EP N +F +V A D+D + + ++Y + + + F I +G ++ R E+ + E+ + ++ + G + SSV VNV +
Sbjct: 292 LKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSI-----VSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPK-----TAYTS---LTVTLLDVNDEPPLFTQTKYV----ATAVENSLPGLFV--VSVSAADSDLGENGTVRYNFDPD---MPAQYREMFRLDSLTGKVTTLKSLDREELEEYP---LVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFA--SILENEPGGTAVTTVTATDPDRGANGTVRYQLTAG---DAARFQVNAVTGAVSTRVSLDRE----ERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGD-QRGSFSIEWSGGRIFTAN---AIDREEQAFYQLRVVAN------SGGVAGEASVSVLVHDVNNHAPVF-----DRASYEVSIAEDEPVNSRFFSVRATDKD-SGKNGEVKYEIGEGNGGEKFGI-FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTV 852 HSP 3 Score: 122.865 bits (307), Expect = 2.346e-28 Identity = 133/537 (24.77%), Postives = 227/537 (42.27%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRET------TNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNP-TPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEII-IKDQNDNAPTLTYFGT-PSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIK---PKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDRE 2109
P+FN + E ++G + ATD D G+N TY + + V L+S T + + DRE +SF ++A DGG+ + + + D NDN PQF+ +Y+ V E N ++LR++A+D DEG+NG + Y + + G F+++ +G+I L LD E+ + V A + T P+ ++ +V + VL+ D P L S+ + ++T+T+ + D S R I++ + + + + + +D E N+ ++ P SSA I ++ ++D NDN P SI+EN GT V + A+D D NG + +S+ + FP + +I G I + ID E + F + V ATD I +S +++ + D NDN P+F + I S VG ++ D D + N +R ++ + R + T+ LDRE
Sbjct: 860 PLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQ-----------VNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGK-----FTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLA-----ASCTVAVQVLDENDNPPRFTESLL-----SVDALESTRVGELLITLTASDEDTGPSGDVRYA----IVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDG--GRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQ-FPPGAHFTIDPESGEICTAAEIDREVTGGLFE---VTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVDGLRAAAGSVVGTLQASDPDEAE--NAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRE 1358 HSP 4 Score: 117.857 bits (294), Expect = 9.059e-27 Identity = 155/626 (24.76%), Postives = 274/626 (43.77%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFD-PRFKTGALILDYFSINEDSGEIYLKKPLDYEK------QTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYK----VKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVE--DKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDRE-KDPKFNFQVIATDSL--GNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRREMAK 2433
ATDKD G N Y+I + + + +L V LDRET +YS + A+D G + + S+ + + ++D NDN P F+S Y F +E + + ATD D G NG + Y F+ P+ F ++ ++G I + D E F F V+A + P + A+V++ V +V D P + + + + V E+ SN ++ VT+ +D+ + L + I++G+E K + +I +DRE+ + + +S S + ++S + + + D+NDN P T + LE+T+ G ++ + A D+D G +G V +++ A + +I + G + + +D E+ + V+A D G P+S+ + + ++D NDN P F + +IMEN + V + D DV+ +++ + + P F I ++ I T +DRE F V ATD + S V V V D+NDN P + P+ + V T+ A+D D+ +E + Y + + +F +DR+ G I T E+ +
Sbjct: 782 ATDKDSGKNGEVKYEIGEG-----NGGEKFGIFPD-----GQLYVRYELDRETREEYSLTVSAMDTG-VEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN--------FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPL---QDRATVQVFVQDVNDNPPQ----FAKSVYQASVSESASN-LTQLLRVTA--SDVDEGVNGALRY------AINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPL-AASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAI--VAGNTHATFAIDRSTGSVFLARRLDFETQ----RLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEIC---TAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPT----AILVDGLRAAAGSVVGTLQASDPDE-AENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDR 1357 HSP 5 Score: 112.464 bits (280), Expect = 3.521e-25 Identity = 136/568 (23.94%), Postives = 236/568 (41.55%), Query Frame = 1
Query: 592 GHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIY-----KEFVKEGLNSVRILR-LSATDPDEGINGKIIYKFDPR----FKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVK---SFEIRTNQEIDREKIPKISTNILCKESVDSHVP----SSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSME-------KSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP 2223
G I ATD D G N + TY + F V++ + V L+ + LDRE Y + A DG T +++A+R D NDN P+FS Y ++ +G + ++ + A D D G G++ Y P + GA F ++ +G + + +PLD E + + A + +TA + ++VL+ D N + N + + + +++ +++ ++D + LE IS GD + ++ + +DRE+ + N++ + S + P SS+ ++ +I+ D NDNAP T + E++ G VV + A D D G N V +++ A ++ G +++ +D E+ Q LT++ A D G P ++ +++T+ D NDN P+F I E+ + V + D D + N LR + P + + L R LDRE+ + V A D G P S T +V V + D ND P
Sbjct: 1532 GEVIFTLSATDADQGQNALVTYSVLSGSEGAF-------VVDAASGV---LRASRRLDREERASYLLTVRASDG--THATDARLSVAVR--DANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGA-----FGLHPVTGALNVTRPLDRESRACYVLRARATDGGG------LAATARLYVNVLDAND-----NAPSVQNDSLAAEVPEDAPPGTSLLRISATDDD--EGVNAELEFS------ISSGDPEGRFAVGNDGQLSVARALDRER--QSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREAR--QSYALTVL--AVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPD--EGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDG-GGPARSDTASVRVTLSDVNDCSP 2052 HSP 6 Score: 107.842 bits (268), Expect = 8.361e-24 Identity = 150/621 (24.15%), Postives = 266/621 (42.83%), Query Frame = 1
Query: 760 LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG--LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREK-IPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLE--PRNYKFMTVSANDQDQTSEFNT-IEYHLESE---SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFN-----PGYTSMKSSVQVNVVIDASTAKSNSPR 2556
+DRE Y ++A GG G ++++ + D N++ P F Y+ + E +NS R + ATD D G NG++ Y+ G + F I D G++Y++ LD E + + V A++ + +S+ +V ++VL+V D +PL + Y+ + EE + V V T + + E Q L S E+ ++ S + + + R+ S +++ + A +++ ++D NDN P S+ E+ T + ++ A D DEG NG + +++ E F ++ + G I + +D E + + T+VV+ATD G P + +++ + D NDN P+FT S + +E+ + + D+D D+ + + N F I + +F R LD E + V A D G P S + V V D NDN P + P A++ +E P + +TV+A D D ++ N + Y + + F ID + G I T E+ + G + ++TV P +T + S NV + + N+PR
Sbjct: 719 IDREEQAFYQLRVVANSGG----VAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNS-RFFSVRATDKDSGKNGEVKYEIGE--GNGG---EKFGIFPD-GQLYVRYELDRETREEYSLTVSAMD----TGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYV----FHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDS---ETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKF------TVDASTGQITLLGSLDREET----ASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGN-THATFAIDRSTGSVF---LARRLDFETQRLYRLNVSAEDG-GRPPRSSATILVVHVRDFNDNPPAFL-PGDVFASI-----MENIPIGTRVITVTARDPD--ADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTG-GLFEVTVRATDKAIPVHT--RRSALKNVTVLVTDENDNAPR 1291 HSP 7 Score: 86.2705 bits (212), Expect = 3.075e-17 Identity = 78/287 (27.18%), Postives = 125/287 (43.55%), Query Frame = 1
Query: 1516 SSSAKIEIIIKDQNDNAPTLTYFGTPS----ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKN-----SFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFH-------LNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQ 2328
SS ++EI ++D NDN P F P + ENT G V+F + A D D+G+N VT+S+ S + GV++ +D E + LT+ + H +TD ++S+ ++D NDN P+F+ F + E+ + + +G + D D + A+ P A+ F LN TR LDRE + + ATD G + T + V V+D NDN P + QN++ + P + +SA D D+
Sbjct: 1497 SSFNQVEISVEDVNDNPPV---FAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSG---SEGAFVVDAASGVLRASRRLDREERASYL--LTVRASDGTH-----ATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTY-----ALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG---LAATARLYVNVLDANDNAPSV----QNDSLAAEVPEDAPPGTSLLRISATDDDE 1758 HSP 8 Score: 53.9138 bits (128), Expect = 2.297e-7 Identity = 61/259 (23.55%), Postives = 104/259 (40.15%), Query Frame = 1
Query: 1840 PKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIF-------HLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYK----FMTVSANDQDQTSEFNTIEYHLESESD------VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIEN 2565
P S+ Q+ I+++DVNDN P F M + EN + + + D D + +N A++ + +L + F L +R LDRE+ + V A+D T++ + V V D NDN P S++ + V P TV A D D + F + Y L D F + G + R + + +V++ + G + + + VNV+ A N+P ++N
Sbjct: 1495 PMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDAD---------QGQN-ALVTYSVLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDG----THATDARLSVAVRDANDNSPRF---SRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDAD-SGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVL----DANDNAPSVQN 1731
BLAST of Protocadherin-9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 157.918 bits (398), Expect = 1.612e-39 Identity = 193/775 (24.90%), Postives = 333/775 (42.97%), Query Frame = 1
Query: 379 VDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVE------------------LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-----EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLK--KPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISV-LN-------VYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLTYFGTP------------SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPS--LEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKF------TSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTI-EYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDAST 2535
+D +++C + C + +A + S + D+++ +RD ND+ P F ++ + ISES +G + LP A D D G N ++ Y+IS + +L + + S + L++ + LDRE Y L DGG + +GS+ + I ++D NDN P F P + E K G + +++L A DPD G NG I Y F + + A ++ +G + ++ + LD E + V+A + + +ASV ++V LN V+ E + + +YL + IVE S V +++V+ + ++ RLE F L S KV+ F ++T + +D E+ + + ++L + D P S + +II D NDN P F P S+ EN GTVV ++A D D G NG +TF++ + A E S+ G + + + +D E + + V A D G + + +T+ D NDN P F T+ F + E ++VG + D D D+ + L A ++ + T LDRE ++ V A DS G P S + V + V D NDN P+I P+ N+ HV ++ ++V+AND D + E + +F ++ G + R ++ D G H + + V + G + + V+ +++A+
Sbjct: 89 LDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAAS----GDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNP-KLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTS---VVQLRAADPDAGPNGAIAYSFHTKLTSLA-TQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQ------LSRSASVTVTVELNDDNDNAPVF-EVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLE-FPTGAELASPN----KVQ-FLLKTTRLLDYEEAQQYNVSVL---AADRGTPKLSKLLNLIISVVDINDNTPV---FMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRM----RYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDS-GRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRGGSGSRRVRAVSGLLEAAA 830
BLAST of Protocadherin-9 vs. Ensembl Sea Lamprey
Match: si:ch211-199f5.1 (protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]) HSP 1 Score: 146.362 bits (368), Expect = 6.289e-36 Identity = 161/585 (27.52%), Postives = 250/585 (42.74%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIV---EENKSNFFVAIVTVT---SKENDLFRSIQCRLE---HFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLE---YLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHM-----IFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR--SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDN 2217
P F + +EISESV +G + L A D D G N + Y + E F R T + EL V LDRE +Y+ L A DGG ++G+ + I ++D NDN P F+ V+E +L L+ATD DEG NG+++Y F A + F ++ +G++ LK LD+E + ++ + A + P + + V + V ++ D EI +D++ V E FV +VTV+ S EN L + C L HF+ L+ D+ + + TN +DRE +++ L E+ D P A + ++ D+NDN P TY S+LEN PG V + A D D NG + +++ +S Y+SI + G I +D E+ T+LT V A D G+ P T+ +S+ I D NDN P T + + + + V + D D + L R N L F I + +F N D + V+ G+P S T +++ V D
Sbjct: 134 PDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENE--RFGLALRAR---TDGAKYAELVVKSRLDREQEGEYTLQLTAWDGGDP-PRSGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSS--PVDAEVRRLFQLDPKTGKLSLKGQLDHELNSEYEISIQARDMGP----SSIPAHCKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGL---VACHLRGHPHFK----LLPYRDD------YVVVTNSSLDRE---QMADYFLVLEASDGGTPPRVAARQFTVRLLDENDNEPRFHRSTY--EASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYALRPLDYEA----MTSLTFQVQARDDGVPPLVTNATVSVRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNERNL-FRINRLGGEVF-TNAASVTDAAASATRHSLVVMVRDRGSPALSATAAIEIRVGAHGDG 682 HSP 2 Score: 96.6709 bits (239), Expect = 1.617e-20 Identity = 136/595 (22.86%), Postives = 239/595 (40.17%), Query Frame = 1
Query: 841 INIAIRIIDENDNMPQFS-SPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFV------AIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV------KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL-------TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV-HDDI---NLVLRSKNPAMLP--FVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNT-IEYHL--ESESDVFDIDRQEGTIFTRREM---AKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDA 2529
++ + ++D ND+ P F+ S ++ E + R+ A D D G N Y D + G L L + E+ +K LD E++ + + A + P + T V I+VL+ +N N + + N V V +T D+ + + + S S D + K+ ++ ++D E + +I ++ S +P+ K+ + ++D NDNAP + + T + E + V + D D ENG V + P + L D V+ S +D E Q +V+ A+D G P+ Q ++ + D NDN P+F S +++ENN ++V + D D H+ + N+V A + I + I+ L R LD E FQV A D G P TV V ++D+NDN P++ P N T V+ ++ +D SE N + Y + +E ++F I+R G +FT A + H + + V + G ++ ++ + + + A
Sbjct: 120 VHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFG-LALRARTDGAKYAELVVKSRLDREQEGEYTLQLTAWDGGDPP----RSGTTLVRITVLD-------------SNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEG-----PNGEVVYSFSSPVDAEVRRLFQLDPKTGKLSLKGQLDHELNSEYEISIQARDMGPSSIPAH-CKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLR--GHPHFKLLPY-RDDYVVVTNSSLDRE----QMADYFLVLEASDGGTPPRVAARQFTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYAL---RPLDYEAMTSLTFQVQARDD-GVPPLVTNATVSVRIVDENDNAPVVTHPPLRNGT-GVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNERNLFRINRLGGEVFTNAASVTDAAASATRHSLVVMVRDRGSPALSATAAIEIRVGA 678 HSP 3 Score: 58.151 bits (139), Expect = 1.067e-8 Identity = 69/285 (24.21%), Postives = 116/285 (40.70%), Query Frame = 1
Query: 1732 ETDGVIKVKSIIDCESSLAQFTTLTI---VVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--------HDDIN----LVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD-----VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
E DG + + +ID E Q + I V+ G+ + + + D+ND+ P F S M I E+ + V D DV H D N L LR++ + L LDRE++ ++ Q+ A D G+P S T V + V+D NDN P+ +Q + V V P +T++A D D+ + Y S D +F +D + G + + ++ E+ I I + G +S+ + +V V ++
Sbjct: 79 EADGTVSAREVIDREQQCGQAPSCVIRFDVLCTLPRGLFQL---VHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFGLALRART----------DGAKYAELVVKSRLDREQEGEYTLQLTAWDG-GDPPRSGTTLVRITVLDSNDNSPVF---AQTSCNVTVREDATPGTV-LLTLNATDVDEGPNGEVV-YSFSSPVDAEVRRLFQLDPKTGKLSLKGQLDHELNSEYEISIQARDMGPSSIPAHCKVLVHVE 344
BLAST of Protocadherin-9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 132.88 bits (333), Expect = 2.433e-31 Identity = 165/696 (23.71%), Postives = 291/696 (41.81%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE-SYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFT--IMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMT--VSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREM---------AKSDIGEHVIKITVFNPGYTSMKS--SVQVNVVIDASTAKSNSPRI 2559
P F + + E IG + L ATD D G N + +Y++ R D HF ++N T ++ LDRE Y ++ A+DGG T + S + + + D ND+ P+F + Y + + + ++A D D G NG + + G FS++ G I+ + L + ++ PP S +V + + E +++S E+ + +V S S + S + GD + +S E+ ++ +D E L E+ DS P SA K+E+ + D NDNAP + ++ + ENT P T+V + A DKD G NG+V +S+ ++ + G I+ S +D E + + V ATD G + +++ I++ D NDN P+FT IF+ + E+ V + D D + + +P+ LPF I I +R L+RE + +V A+D P +V+ V + V D NDN P + T + I + EP + + VSA+D D + + + + S+++ F + R G I + R + + +++ ++ +T + G + S +V +N+V+ +N+PR
Sbjct: 24 PRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-----RGGDGHF------SVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAG------FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPP---------RSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYH--------LASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYE---LVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWA--KVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNV--FRVNPNSGEIRSVSTLDRE----NVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT---QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPFSIHPSTGEI---TVSRRLNREDRSGYAVKVRASD----PAWTVSTDVTIVVDDVNDNAP------RFGQTAYYIEFPEPSEGEALVARVSASDADDGAN-GQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVV----PNANAPRF 651 HSP 2 Score: 115.161 bits (287), Expect = 5.968e-26 Identity = 160/661 (24.21%), Postives = 276/661 (41.75%), Query Frame = 1
Query: 595 HTITLPVATDKDFG-NNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYK-FDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI--VEENKSNFFVAIVTVTSKEND----LFRSIQCRLEHFQEILSLISKGDESYKVKSFE-IRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVH--VISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
TI + A DKD G N QV+ I N FR+N + E++ LDRE Y + A D G Q ++ + I + DENDN P+F+ I+ V+E +LR+S D DEG N I + DP FSI+ +GEI + + L+ E ++ + V A +P +T + V I V +V D N Y I E ++ VA V+ + ++ +F ++ + E+F+ G +S ++ S +R ++ ++D P SS A + I I N NAP + TP + + GT + + A D D NG++ +S+ + G G + +++ + ++ + ++ V A D G P S+ I++ + N P+F + ++ EN+ S + + D D V+ I + S + + L F I + + + + LD E + +N V A D +G V + V D NDN P++ NA+ + VI P + + A D D S T+ + E+D+F ++++ G + T+ + + + + FN T S+ QV+V I
Sbjct: 352 RTIVVLTAVDKDSGINGQVDYSIIDGN----IGNVFRVN------PNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHC-TVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP--------FSIHPSTGEITVSRRLNREDRSGYAVKVRASDPA-------WTVSTDVTIVVDDVND-----NAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFR-------VGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTP-VAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAG---GFLHLRASLAGDAG----SIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGL-FDISRASGDVLLVG---ELDYETEKLYNLSVCAADGGWQAKTECSG-VSISVTDVNDNPPML------NASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQI 954 HSP 3 Score: 114.775 bits (286), Expect = 7.251e-26 Identity = 159/601 (26.46%), Postives = 249/601 (41.43%), Query Frame = 1
Query: 592 GHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKES-------VDSHVPSSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV---HDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQ-NNATVHVISYLEPRNYKFMT-VSANDQDQTSEFN 2343
G ++ ATD D G N Y I+ + + L ++ + ++ + LD ET Y+ + A DGG KT ++I + D NDN P ++ Y + E S +L + A D D N +Y D D F +N+ +G + + LDYE + ++ V A N T + STA V + + V + P + +Y N+ + E V V T ++ + ++ L F E S KG S + EI + ++DRE+ + ++ K + VD + + + I D ND P + Y G + E GT V + A D D R TFS + + SI G+I V S +D ES LT+V A D G P + + + ++DVNDN P +S + EN V +E D D+ L +PA + L + L T R +DRE+ P+F+ V D+ G+P + T T+ + V+DQNDN PS+ + VHV + P F+ V D D + FN
Sbjct: 771 GSSLARVTATDTDAGVNGAIVYSIASGD---------GSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGW-QAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEA------DLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN----YPDTFHYSTAQVHVQITGVNEYFPRFVQREY----NFVVSESAPVGAPVGSVFATDRDAGIDGTVFYML--FGESRS---KG-FSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVL------VNVAITDAND-PPVFSSALYHG--RVSEAASVGTHVVGVSAHDFDSPPGWR-TFSFLIQSGNAGRAFSINAHTGLIVVASPLDRES--VPLYNLTVV--AVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSA--KVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGL---LKTARPIDREQKPEFHLPVAIADA-GSPPLTSTVTLHLSVLDQNDN------PSEARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFN 1315 HSP 4 Score: 110.923 bits (276), Expect = 1.144e-24 Identity = 142/588 (24.15%), Postives = 245/588 (41.67%), Query Frame = 1
Query: 832 TGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDN-----APTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVE-DKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII--IFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRI 2559
TG+ + + + DENDN+P+F + + V E + ++ATD D G+N I Y+ R G +FS+N +G+I LD E + + V A++ PTP + +S+A++ ++V +V D P +N Y+ + + A+ VT+++ D + R LS + S + I + + + P+ + + S D P SA + ++ ++ AP F S E+ PGT + + A+ G V++ + + ++ G + V +D E +VV A D G P S L++ + + D+NDN P+F+SS + EN + V V+ D ++ ++ + N + F + + I ++T LDRE + V ATD G+PT T V + V D+NDN P IF + V + + VS D D+ I + L S F I G I R + + D + +K+ +P +T S V +V+D N+PR
Sbjct: 7 TGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL--RGGDG-----HFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGL-----SSSATLVVAVTDVNDHTPRFLNAPYV------AYAPSSAPAGTAVFAVTARDADAGPNGDLRFS-----LSGSASAGFSVDPRRGVIHAARAL---QGPRDDLTLTVRVS-DGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSF---SFREDQPPGTTITVVAARSSRRA--GPVSYHLASGGNLG-DVFAVDPQSGEVSVHRALDHEYQ----HHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNV-FRVNPNSGEIRSVST---LDRENVASYELTVKATDR-GSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAV-------GFPVLRVSTLDADEGPN-AAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWT---VSTDVTIVVD--DVNDNAPRF 539 HSP 5 Score: 94.3597 bits (233), Expect = 1.405e-19 Identity = 122/508 (24.02%), Postives = 217/508 (42.72%), Query Frame = 1
Query: 1015 FKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKG-DESYKVK--SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDP----------KFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIII---FPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITV 2469
+G + D F+++ SGE+ + + LD+E Q ++ V A + PP + L +E+ VL++ D E + +++ ++ V EN + ++T K++ + + Q S+I ++V S EIR+ +DRE + + ++ D P+ ++++I D+NDN+P T + + E+ G V ++ D DEG N +TFS+ + P SI + G I V ++ E + + V A+D STD ++I + DVNDN P+F + E + + V + D D + + +RS+ F + + + I ++ R L R +DP K++F V A D G P S TV + ++ N N P + + + ATV + + +SA D D+ I Y + + S FD+D G R D G + +TV
Sbjct: 269 LASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYL-----KLEVDVLDINDNAPE----FSSSRFWAKVPENTPPRTIVVLTAVDKDSGI---------NGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTV---KATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP----FSIHPSTGEITVSRRLNREDR----SGYAVKVRASDPAWT-VSTD--VTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTEN---FRVGRDSGEI---HSVRPL-RYRDPAGGGSGANLNKYSFVVTAMDR-GRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRA-------GTRILDMSAVDPDRDVN-GQIAYSVVGGNASRRFDVD--AGGFLHLRASLAGDAGS-IFSVTV 725 HSP 6 Score: 89.3521 bits (220), Expect = 3.887e-18 Identity = 139/612 (22.71%), Postives = 241/612 (39.38%), Query Frame = 1
Query: 778 NKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVY-----DEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDES----YKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL------RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTG------TVDVEVIDQNDNFPIIIFPSQNNATVHV-ISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
NKYSF + A+D G+ + + I I+ N N P+F Y V + + RIL +SA DPD +NG+I Y G F ++ G ++L+ L + + F V A + PP++ +TA + ++ N Y PLE+ S+ E + + +A VT T + + + I+ I+ GD S S ++ E+D E K+ +C + + + I + D NDN P L Y+ P I EN GT V + A D D N +S++ + + + GV+ + +D E+ T + V A ++ + Q+ + I VN+ P+F F + E+ + VG + D+D D + RSK F + + I + LDRE++ +VIA ++ S+ G V+V + D ND P ++A H +S + VSA+D D + T + ++S F I+ G I + + + + + + + G + V V ++
Sbjct: 615 NKYSFVVTAMDRGRPPLSS-DATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSV-----VGGNASRRFDVDA-GGFLHLRASLAGDAGSIFSVTVEARDRGRPPLS---SRATAIISVTEENQYAPRFAHPPLEL----------SLPENHPAGSSLARVTATDTDAGVNGA----------IVYSIASGDGSGLFDISRASGDVLLVGELDYE-TEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYY--PVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDG---EADLFVLNQKTGVLTTQGFLDYETK----QTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG-----FSVNEHTGEII---VSSQLDREREASATLRVIAKNA-----GSIRGFDVDEVLVNVAITDANDP------PVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALE 1167 HSP 7 Score: 85.5001 bits (210), Expect = 6.101e-17 Identity = 135/563 (23.98%), Postives = 216/563 (38.37%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKF--DPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLY-TSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTN-------QEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGEN-GRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTR--SLDREKDPKFNFQVIATDSLGNPTNSVT 2178
P+ N + I E+ G T+ + A D D +N V Y + E F LN T L LD ET Y + A + T + + + ++I N+ P+F Y V E + + ATD D GI+G + Y + R K FS+NE +GEI + LD E++ VIA N +I + V +++ + D P+ + Y + V E S V V +D R F LI G+ ++F I + +DRE +P + ++ +VD P ++ +++ +D NDN P L + + EN G V + A D D N G TF + S Y S+ + G++K ID E Q + V D G P ++ + + +++ D NDN + + + F+G++ D D+ D N L S PF + F NT R S R + +F V +D +P +
Sbjct: 858 PMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLF----------VLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYS-TAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG-------FSVNEHTGEIIVSSQLDREREASATLRVIAKNAG---SIRGFDVDEVLVNVAITDANDPPVFSSALY-----HGRVSEAAS---VGTHVVGVSAHDFDSPPGWRTFSF-----LIQSGNAG---RAFSINAHTGLIVVASPLDRESVPLYNLTVV---AVDMGEPPATGTTVVVVALEDVNDNGPFL-LTSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSL-SSSGLLKTARPIDRE----QKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTSG-----PFNVFS-----FQPNTCRLISQPRSAEGRFELSVRGSDGKHSPATTTA 1364
BLAST of Protocadherin-9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 132.494 bits (332), Expect = 2.512e-31 Identity = 165/696 (23.71%), Postives = 291/696 (41.81%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE-SYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFT--IMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMT--VSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREM---------AKSDIGEHVIKITVFNPGYTSMKS--SVQVNVVIDASTAKSNSPRI 2559
P F + + E IG + L ATD D G N + +Y++ R D HF ++N T ++ LDRE Y ++ A+DGG T + S + + + D ND+ P+F + Y + + + ++A D D G NG + + G FS++ G I+ + L + ++ PP S +V + + E +++S E+ + +V S S + S + GD + +S E+ ++ +D E L E+ DS P SA K+E+ + D NDNAP + ++ + ENT P T+V + A DKD G NG+V +S+ ++ + G I+ S +D E + + V ATD G + +++ I++ D NDN P+FT IF+ + E+ V + D D + + +P+ LPF I I +R L+RE + +V A+D P +V+ V + V D NDN P + T + I + EP + + VSA+D D + + + + S+++ F + R G I + R + + +++ ++ +T + G + S +V +N+V+ +N+PR
Sbjct: 24 PRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-----RGGDGHF------SVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAG------FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPP---------RSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYH--------LASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYE---LVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWA--KVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNV--FRVNPNSGEIRSVSTLDRE----NVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT---QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPFSIHPSTGEI---TVSRRLNREDRSGYAVKVRASD----PAWTVSTDVTIVVDDVNDNAP------RFGQTAYYIEFPEPSEGEALVARVSASDADDGAN-GQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVV----PNANAPRF 651 HSP 2 Score: 115.161 bits (287), Expect = 6.111e-26 Identity = 160/661 (24.21%), Postives = 276/661 (41.75%), Query Frame = 1
Query: 595 HTITLPVATDKDFG-NNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYK-FDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI--VEENKSNFFVAIVTVTSKEND----LFRSIQCRLEHFQEILSLISKGDESYKVKSFE-IRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVH--VISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
TI + A DKD G N QV+ I N FR+N + E++ LDRE Y + A D G Q ++ + I + DENDN P+F+ I+ V+E +LR+S D DEG N I + DP FSI+ +GEI + + L+ E ++ + V A +P +T + V I V +V D N Y I E ++ VA V+ + ++ +F ++ + E+F+ G +S ++ S +R ++ ++D P SS A + I I N NAP + TP + + GT + + A D D NG++ +S+ + G G + +++ + ++ + ++ V A D G P S+ I++ + N P+F + ++ EN+ S + + D D V+ I + S + + L F I + + + + LD E + +N V A D +G V + V D NDN P++ NA+ + VI P + + A D D S T+ + E+D+F ++++ G + T+ + + + + FN T S+ QV+V I
Sbjct: 352 RTIVVLTAVDKDSGINGQVDYSIIDGN----IGNVFRVN------PNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHC-TVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP--------FSIHPSTGEITVSRRLNREDRSGYAVKVRASDPA-------WTVSTDVTIVVDDVND-----NAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFR-------VGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTP-VAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAG---GFLHLRASLAGDAG----SIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGL-FDISRASGDVLLVG---ELDYETEKLYNLSVCAADGGWQAKTECSG-VSISVTDVNDNPPML------NASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQI 954 HSP 3 Score: 114.775 bits (286), Expect = 7.057e-26 Identity = 159/601 (26.46%), Postives = 249/601 (41.43%), Query Frame = 1
Query: 592 GHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKES-------VDSHVPSSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV---HDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQ-NNATVHVISYLEPRNYKFMT-VSANDQDQTSEFN 2343
G ++ ATD D G N Y I+ + + L ++ + ++ + LD ET Y+ + A DGG KT ++I + D NDN P ++ Y + E S +L + A D D N +Y D D F +N+ +G + + LDYE + ++ V A N T + STA V + + V + P + +Y N+ + E V V T ++ + ++ L F E S KG S + EI + ++DRE+ + ++ K + VD + + + I D ND P + Y G + E GT V + A D D R TFS + + SI G+I V S +D ES LT+V A D G P + + + ++DVNDN P +S + EN V +E D D+ L +PA + L + L T R +DRE+ P+F+ V D+ G+P + T T+ + V+DQNDN PS+ + VHV + P F+ V D D + FN
Sbjct: 771 GSSLARVTATDTDAGVNGAIVYSIASGD---------GSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGW-QAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEA------DLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN----YPDTFHYSTAQVHVQITGVNEYFPRFVQREY----NFVVSESAPVGAPVGSVFATDRDAGIDGTVFYML--FGESRS---KG-FSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVL------VNVAITDAND-PPVFSSALYHG--RVSEAASVGTHVVGVSAHDFDSPPGWR-TFSFLIQSGNAGRAFSINAHTGLIVVASPLDRES--VPLYNLTVV--AVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSA--KVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGL---LKTARPIDREQKPEFHLPVAIADA-GSPPLTSTVTLHLSVLDQNDN------PSEARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFN 1315 HSP 4 Score: 110.923 bits (276), Expect = 1.095e-24 Identity = 142/588 (24.15%), Postives = 245/588 (41.67%), Query Frame = 1
Query: 832 TGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN--PTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDN-----APTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVE-DKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII--IFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRI 2559
TG+ + + + DENDN+P+F + + V E + ++ATD D G+N I Y+ R G +FS+N +G+I LD E + + V A++ PTP + +S+A++ ++V +V D P +N Y+ + + A+ VT+++ D + R LS + S + I + + + P+ + + S D P SA + ++ ++ AP F S E+ PGT + + A+ G V++ + + ++ G + V +D E +VV A D G P S L++ + + D+NDN P+F+SS + EN + V V+ D ++ ++ + N + F + + I ++T LDRE + V ATD G+PT T V + V D+NDN P IF + V + + VS D D+ I + L S F I G I R + + D + +K+ +P +T S V +V+D N+PR
Sbjct: 7 TGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL--RGGDG-----HFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGL-----SSSATLVVAVTDVNDHTPRFLNAPYV------AYAPSSAPAGTAVFAVTARDADAGPNGDLRFS-----LSGSASAGFSVDPRRGVIHAARAL---QGPRDDLTLTVRVS-DGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSF---SFREDQPPGTTITVVAARSSRRA--GPVSYHLASGGNLG-DVFAVDPQSGEVSVHRALDHEYQ----HHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNV-FRVNPNSGEIRSVST---LDRENVASYELTVKATDR-GSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAV-------GFPVLRVSTLDADEGPN-AAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWT---VSTDVTIVVD--DVNDNAPRF 539 HSP 5 Score: 94.3597 bits (233), Expect = 1.345e-19 Identity = 122/508 (24.02%), Postives = 217/508 (42.72%), Query Frame = 1
Query: 1015 FKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKG-DESYKVK--SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDP----------KFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIII---FPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITV 2469
+G + D F+++ SGE+ + + LD+E Q ++ V A + PP + L +E+ VL++ D E + +++ ++ V EN + ++T K++ + + Q S+I ++V S EIR+ +DRE + + ++ D P+ ++++I D+NDN+P T + + E+ G V ++ D DEG N +TFS+ + P SI + G I V ++ E + + V A+D STD ++I + DVNDN P+F + E + + V + D D + + +RS+ F + + + I ++ R L R +DP K++F V A D G P S TV + ++ N N P + + + ATV + + +SA D D+ I Y + + S FD+D G R D G + +TV
Sbjct: 269 LASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYL-----KLEVDVLDINDNAPE----FSSSRFWAKVPENTPPRTIVVLTAVDKDSGI---------NGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTV---KATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP----FSIHPSTGEITVSRRLNREDR----SGYAVKVRASDPAWT-VSTD--VTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTEN---FRVGRDSGEI---HSVRPL-RYRDPAGGGSGANLNKYSFVVTAMDR-GRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRA-------GTRILDMSAVDPDRDVN-GQIAYSVVGGNASRRFDVD--AGGFLHLRASLAGDAGS-IFSVTV 725 HSP 6 Score: 89.3521 bits (220), Expect = 3.722e-18 Identity = 139/612 (22.71%), Postives = 241/612 (39.38%), Query Frame = 1
Query: 778 NKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVY-----DEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDES----YKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL------RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTG------TVDVEVIDQNDNFPIIIFPSQNNATVHV-ISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
NKYSF + A+D G+ + + I I+ N N P+F Y V + + RIL +SA DPD +NG+I Y G F ++ G ++L+ L + + F V A + PP++ +TA + ++ N Y PLE+ S+ E + + +A VT T + + + I+ I+ GD S S ++ E+D E K+ +C + + + I + D NDN P L Y+ P I EN GT V + A D D N +S++ + + + GV+ + +D E+ T + V A ++ + Q+ + I VN+ P+F F + E+ + VG + D+D D + RSK F + + I + LDRE++ +VIA ++ S+ G V+V + D ND P ++A H +S + VSA+D D + T + ++S F I+ G I + + + + + + + G + V V ++
Sbjct: 615 NKYSFVVTAMDRGRPPLSS-DATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSV-----VGGNASRRFDVDA-GGFLHLRASLAGDAGSIFSVTVEARDRGRPPLS---SRATAIISVTEENQYAPRFAHPPLEL----------SLPENHPAGSSLARVTATDTDAGVNGA----------IVYSIASGDGSGLFDISRASGDVLLVGELDYE-TEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYY--PVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDG---EADLFVLNQKTGVLTTQGFLDYETK----QTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG-----FSVNEHTGEII---VSSQLDREREASATLRVIAKNA-----GSIRGFDVDEVLVNVAITDANDP------PVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALE 1167 HSP 7 Score: 85.5001 bits (210), Expect = 6.198e-17 Identity = 135/563 (23.98%), Postives = 216/563 (38.37%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKF--DPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLY-TSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTN-------QEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGEN-GRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTR--SLDREKDPKFNFQVIATDSLGNPTNSVT 2178
P+ N + I E+ G T+ + A D D +N V Y + E F LN T L LD ET Y + A + T + + + ++I N+ P+F Y V E + + ATD D GI+G + Y + R K FS+NE +GEI + LD E++ VIA N +I + V +++ + D P+ + Y + V E S V V +D R F LI G+ ++F I + +DRE +P + ++ +VD P ++ +++ +D NDN P L + + EN G V + A D D N G TF + S Y S+ + G++K ID E Q + V D G P ++ + + +++ D NDN + + + F+G++ D D+ D N L S PF + F NT R S R + +F V +D +P +
Sbjct: 858 PMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLF----------VLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYS-TAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG-------FSVNEHTGEIIVSSQLDREREASATLRVIAKNAG---SIRGFDVDEVLVNVAITDANDPPVFSSALY-----HGRVSEAAS---VGTHVVGVSAHDFDSPPGWRTFSF-----LIQSGNAG---RAFSINAHTGLIVVASPLDRESVPLYNLTVV---AVDMGEPPATGTTVVVVALEDVNDNGPFL-LTSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSL-SSSGLLKTARPIDRE----QKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTSG-----PFNVFS-----FQPNTCRLISQPRSAEGRFELSVRGSDGKHSPATTTA 1364
BLAST of Protocadherin-9 vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 179.104 bits (453), Expect = 2.021e-45 Identity = 192/627 (30.62%), Postives = 293/627 (46.73%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYL--NNKNYSIVEENKS-NFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDES--YKVKSFE---IRTNQEIDREKIPKISTNILCKESVDSHVPSSS--AKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDD--INLVLRSKNPAMLPFVILKKANRIFHLNT------TRS-LDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREM 2427
ATD D GNN Y I+ + F L T+ + KPLDRETT+ Y ++ A D G T G I I I+DEND+ P F+ Y + E V ILR+SA D D G NG I Y D I D ++ +G I K+ LD+E + + F VIA + P L A+V I+VL+ D ++ + YL +N + +I EN N +A + VT K+++ + + I+ GD+ +KV+ I+ + +DRE +P + L D VPS S + I + D NDN+P T T +I E + G+ V ++ A D DEG+NG V++S+ + L + + G++ +D E Q +++TI +TA DHG PK+ +++TI D NDN P+F S TI E + V ++ D D D+ I + S + + N +F LNT T+S LDRE ++F V+A D G+P + V++ + D NDN P + +P + A+ I EP K + V+A D D+ + I Y + + + F ID G I T +
Sbjct: 119 ATDPDAGNNGTVDYTIASGDNTA---TFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRG-TPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFD---LDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDL----ATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELK----------ITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYN---LTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSI--TGGNDLGWFQVDFQSGLVTTAKPLDRE----QVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSD---------AQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDH-GDPQLMSSVKVELTISDINDNAP-VFYPVEYFAS---IMENEPPG-KLLQVTATDADEGTN-AVISYDIIGGNNNGNFSIDSSTGVISTLASL 699 HSP 2 Score: 147.902 bits (372), Expect = 8.868e-36 Identity = 156/605 (25.79%), Postives = 279/605 (46.12%), Query Frame = 1
Query: 742 LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPT---LTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTV---SANDQDQTSEFNTIEYHLESESD-VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
+++ KPLDRE Y+ L D G + T + I + D NDN P F+S Y + E N +L+L+ATDPDEG NG + Y TG L +F ++ SG + KPLD E+ + + A + + P T + +V +++++ D ++ + + E S + + D+ R+ + EI S ++ + +++ ++ + T ++DRE S +L K+ D + SS K+E+ I D NDNAP + YF SI+EN PG + ++ A D DEG N +++ + + SI + GVI + +D E + +F +++++A D G K + +++T+ + DN+P F FT+ EN K + VG + KD + I+ + S +P L ++ I +N +DRE+ ++ VIA P S TV++EV+D+NDN P +T VI ++ V +A D D + + Y L S ++ + I+ G I R++ D ++ +++ + G S++ +++ +
Sbjct: 377 IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGF-VLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSI-----TGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAP-----KTGSTTVTVTIIDGNDNKPR----FMKSSYKGTISEGAS---IGATVLQVSATDVDSGDNGRITY--EISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQL-MSSVKVELTISDINDNAPVFYPVEYFA--SIMENEPPGKL-LQVTATDADEGTNAVISYDIIGGN--NNGNFSIDSSTGVISTLASLDHE--VEEF--FSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNL--FLVDSTGGIIKIN--GDMDREEKAQYLLAVIARVGTVKPL-SAQATVNIEVLDRNDNAPQF-------STSSVIVDIDGTWLVGQVVYNAAAVDLD-AGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITL 938 HSP 3 Score: 122.865 bits (307), Expect = 3.871e-28 Identity = 181/648 (27.93%), Postives = 284/648 (43.83%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDES--YKVKSFE--IRTNQEIDREKIPKISTNILCKESVDSHVP-SSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKP----GTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKV-KSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFT-SSHMIFTIMENNMKNSFVGEIEV-EDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDI 2442
P F + + + ISE IG T+ ATD D G+N TY+IS + ++N L LN+ T L LDRET + YSF ++A D G Q S+ + + I D NDN P F Y + E ++L+++ATD DEG N I Y G FSI+ +G I LD+E + FF + A + TA V ++VLN D P+ + Y N+++ E V V T+K+ + I I GD + + V S I+ N ++DRE+ + ++ + V + P S+ A + I + D+NDNAP F T S++ + G VV+ A D D G+NG V + + +A L I T GVIK+ + + D + T T+ V A+D G P+ + + I IT+ +N + PKFT SS++ + + F + V +D + + + N L F I L +SL + ++ V ATD G P+ S + V + + D ND+ + + NN ++ T+ A+ D S I Y L S F +D + G I TR + + ++
Sbjct: 528 PRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDA-------QVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDP-QLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLLQVTATDADEGTNAVISYDIIGGNNNGN-----FSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYA----AKTAVVNVTVLNKADNLPVFLYEMY----NFTVYENVPKGTLVGRVYATTKDKN------------GSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIAR--VGTVKPLSAQATVNIEVLDRNDNAP---QFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNA---EGLLWINSTSGVIKLARKLTDGDE-----TQYTVQVLASDSGSPPQHSTMTIHITLS-IN-HPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGL-FGIFPGG----KLYIRKSLLQALKGSYDLIVRATDG-GVPSFSASVPVTIYIQDSNDHRSLFV----NNTFRFAVAENSSPGTLVGTLVAHALDH-SRTKDIVYSLISSESHFAVDVRSGQITTRVRLDREEL 1116 HSP 4 Score: 120.168 bits (300), Expect = 2.303e-27 Identity = 164/663 (24.74%), Postives = 277/663 (41.78%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQ----FSSPIYKEFVKEGLNSV---RILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCES-SLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN-------TTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESE--SDVFDIDRQEGTIFTRREMAKSDIGEHVIKI 2463
P+F + + I+E+ K G +I A D+D G+N Y I + + N + L+S T ++ + LD E N Y+F+++A DGG K + I ++D NDN PQ + P + NS+ I + TD D N + K G +++ I L+KPLD E F+ + + P TL V I V +V D P + Y N I E ++ +V + T + ++ + ++ G +S + T + +DRE++ ++ I ++ S + S + + I D NDN P +Y GT I E G V ++ A D D G+NGR+T+ + S + GV+ KS +D E+ SL FT L A DHG + +++ +TI D+NDN P F +IMEN ++V D + N V+ +I N F ++ T SLD E + F+ + A D GN + T V+V V+++ DN P+ ++ N + P+ V A +D+ +I Y + S +++F +D G I +M + + ++++ +
Sbjct: 204 PVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDW-------DAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGG-VPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFY----FIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTL----GFVLIDVTDVNDNSPAFTSNAYTAN----ISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDL------GWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDH-GSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGT--ISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVL-----AKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKL---LQVTATDADEGTNAVISYD-------IIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDG-GNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENV----PKGTLVGRVYATTKDKN---GSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAV 814 HSP 5 Score: 111.309 bits (277), Expect = 1.219e-24 Identity = 165/626 (26.36%), Postives = 268/626 (42.81%), Query Frame = 1
Query: 721 LNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL--NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGE-IYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKE----NDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSS--AKIEIIIKDQNDNAPTL--TYF----GTPSIL-ENTKPGTVVFKIIAQDKDEGENG----RVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESE----SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
NS T + +DRETT + S L ++ ++Q I++ +++ D NDN P+F + Y ++E + N+ + +ATDPD G NG + Y T L + S + KKPLD E F++ + A + P + + I++L+ D P+ YL SI E K + V+ ++ D+ +I I L D S V IRT Q +D E + N++ D VPS + A + I + D NDN+P L TY G +I EN+ T + I+ DKD N ++T ++ F +E+L I+++ +D E L F LT+ V TD G+ +ST + I + DVNDN P FTS+ I E S+V ++ D D D+ + L + + + + + T + LDRE+ + A D P T TV V +ID NDN P + S IS + VSA D D + + I Y + S + +F+++ Q G ++T+ ++ + + + + G + SSV+V + I
Sbjct: 44 FNSNTGVISTTARIDRETTTQISLQLRTLN--PSNQP---ISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPIN-TATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALM----GYCLINITILDENDHAPVFTQNSYLG----SIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDL----DSSTGV----IRTKQNLDFEVKNSYTFNVIAS---DGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCF-KVEFLGF----YFIQLQKPLDRE--LVPFYNLTLNV--TDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGL--VTTAKPLDREQVSSVTITITAQDHGSAPKTGST-TVTVTIIDGNDNKPRFMKSSYKG----TISEGASIGATVLQVSATDVD-SGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTI 627 HSP 6 Score: 98.5969 bits (244), Expect = 1.154e-20 Identity = 88/310 (28.39%), Postives = 144/310 (46.45%), Query Frame = 1
Query: 1423 EIRTNQEIDREKIPKISTNILCKESVDSHV-PSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPK----FNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTS 2334
E+ ++ +DRE S N++ K + S+ S+AKIEI + D ND P T +I E+ G++V + A DKD G+NG + +S+ ++ + G + V +D E++ Q LTI TA DHG+ P S+ + +++ + DVNDN P F + + T+ EN VG D+D + ++ + P + + T ++D E P F V+ATD G+P S ++ V+V D+NDN P + P A + MT++A D D+ S
Sbjct: 1215 ELHLSKTLDRETTS--SYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAM--FDVESATGRLIVAKSLDFETT--QLYELTI--TAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMY--SQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQ-GSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAG---------SSLNVMTITAEDPDRNS 1504 HSP 7 Score: 72.0182 bits (175), Expect = 1.170e-12 Identity = 114/462 (24.68%), Postives = 195/462 (42.21%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNS-VRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYE----KQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNI-LCKESVDSHVPSSSAKIEIIIKDQN--DNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATD-HGIKPKSTDLQISITIQDVN 1887
P+F E + + I+E IG + A+DKD G N + Y IS + L + + S T L V K LD ETT Y + A D G + ++N+ + ++D NDN P F + V+E +N+ + R +A+D D G N I + + + FS+N + EI +D E + F+ V+A + P ++ S+ + V + D N+ + + + ++T+T+++ D R + + S+IS G+ Y + T Q +IP T L ++ D PS + + + + PT + Y G S+ EN GT V ++A NG + + + + S + ++ GV+K ID E A F +VV A D G +++ ++IT+QDVN
Sbjct: 1262 PVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSIS---------NGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSS-TVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKT-----FSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSP----KLSTRKSITVQVTDEND----------NSPGFVSPPAAAAGSSLNVMTITAEDPD-------RNSNGKVTYSIIS-GNNGY--FNLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQG--SVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDS--SKGGFEVVKSTGVVKTTRGIDREGMGASF---NLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 8 Score: 70.0922 bits (170), Expect = 5.544e-12 Identity = 135/556 (24.28%), Postives = 235/556 (42.27%), Query Frame = 1
Query: 616 ATDKDFGNNQVETYKI-SRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGG-QTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKF---DPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIA-VNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKV--KSIIDCESSLAQF--TTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTR-SLDRE---KDPKFNFQVIATDSLGNPTN--SVTGTVDVEVIDQNDNFPI 2226
ATD D G N V +Y I F V++TL S LD E +S + A DGG + KT +N+ + +++ DN+P F +Y V E + + R+ AT D+ NG I Y DP + F ++ G I + +D E++ + VIA V P++ + A+V I VL+ D + + S++ + + V V + DL + + L +Q L+ ++G S I+ +++ + + +L DS P + + I I ++ P TL+ + T +L + F ++A D+D G+NG++ +S+ + G +G+ + + SL Q + ++V ATD G+ S + ++I IQD ND+ F ++ F + EN+ + VG + D H ++ S + F + ++ +I TTR LDRE K+ N ++ +++ N T V V V D NDN P+
Sbjct: 660 ATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLAS----------LDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTV--LNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDK--NGSISYAIVSGDPT--------NLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLS-----AQATVNIEVLDRNDNAPQFSTS-------SVIVDIDGTWLVGQVVYNAAAVDL-DAGKNGLVRYQ--LTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLAS---DSGSPPQHSTMTIHITLSINHPPKFTLSSYVT-HVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQ-----------GNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALD-HSRTKDIVYSLISSESHFAVDVRSGQI----TTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPV 1158
BLAST of Protocadherin-9 vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 173.326 bits (438), Expect = 1.278e-43 Identity = 177/615 (28.78%), Postives = 282/615 (45.85%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGINGKIIYKF-----DPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE---SYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL-TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANR-IFHLNTTRS-------LDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
PIF I E V IG + + ATD+D G+N Y I R + F +N +N V L V K ++RET Y+ + A D G + T + + + D NDN P F+S Y V+E S +L ++A D D G N + Y + RFK IN SG I PLD+E+++ + V A T + YT+ +V I V+N+ D P +NY+ S ++V V++ + D F S+ S++ D S +S I T +DRE + + + ++ + + S+ + I I D+NDN+P + + SILEN+ P + FK+ A D DEG N R+T+++ ++ + IG + GVI + +D E+ +T + + A DHG P+++ + I +T+ D+ND+ P SS + ++ EN K + V I D D +N A L F +L ++ +F L+ T LDRE+ + ++ D GNP+ S V ++VID++DN P P++ N T IS PR + V+A D D
Sbjct: 1306 PIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAF-------AINAMNGV---LTVKKEINRETVPTYTLTIRASDRG-SPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFK----------INSTSGVIMTTTPLDFEEKSQYGLEVTA-------TDSKYTAKTNVTIRVINLNDITPA------FTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLS---------YSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPL-SNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRN-----DAFMIGASSGVITLAQPLDRENK----STYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTG--LN--------AELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADK-GNPSLSSVADVIIDVIDEDDNCP-RFQPTEYNVT---ISESLPRGASIVQVTARDID 1852 HSP 2 Score: 160.229 bits (404), Expect = 1.521e-39 Identity = 194/682 (28.45%), Postives = 307/682 (45.01%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFG-NNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE--SYKVKSF--EIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM----EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTS-EFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSP 2553
P+F+ N +I ES IG T+ ATD D G ++E IS F+ +++ + ++V LDRETT YS + A DGG T + + S + I + D NDN P F P + +I +++ATD D+ NG + Y D FSIN +G I LK LDYEK+T + V A + P +L V++ V +V D P + + + V EN + VA+ VT+ + D ++ + ILS G+E ++ + F EI T +DRE I S I + +++ + I I D+NDN PT T +I E++ GT V ++ A D+D G NG VT+++ + ++F + G++ V+S +D E+ + T+VV A+D G +S I +++ DVNDN P+F S I E+ +S V +++VEDKD + + L F I F L+ T LD E + V A D G+P+ S T V + +I+ NDN P + P+Q + ++ N + ++A D D T F+ +E + S F ID+ G I + + + + + + G S SV N I N+P
Sbjct: 476 PVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFN----------IDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSS-STRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDN-------TDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTV----VKVMVDDVNDNPPQ----FAKSLYTCTVGENLA-AGVAVCYVTATDAD--SGANGKISY--SILS----GNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATT-VNISIADENDNQPTFTGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSF------QLDPRSGILSVRSTLDRET----IPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTG---FVLSKT-PLDYETTAAYQLTVTARDG-GSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAI----NTHVVKLNATDSDGTPLTFDIVEGNAGSS---FKIDQSSGLISVAKRLDRETTANYTLVVRATETG--SQGESVYNNATIRVLDVNDNAP 1097 HSP 3 Score: 158.688 bits (400), Expect = 3.954e-39 Identity = 173/603 (28.69%), Postives = 282/603 (46.77%), Query Frame = 1
Query: 742 LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI-VEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKG-DESYKVKSFEIRTN--QEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTL----TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM---EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN-------TTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHL--ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPG 2481
+ V K LDRETT Y+ + A + G + + N IR++D NDN P F+ Y + + E L + +++ATD DEG N K+ Y+ + F +N +G + K+PLD E Q + V A++ P S ++V L + D L N + Y++ V EN +N I+ V + + D R+ + S+IS ++++ S R +DRE + + I K DS VP S+A + I + D+NDN+P T +G I E G+ V + A D+DEG N +V +S+ + SAF +I +GV+ VK I+ E+ T T+ + A+D G ++D ++++ + DVNDN P F S I ++ EN+ +++ V + +D DV N VLR +I + F +N TT LD E+ ++ +V ATDS +VT + VI+ ND P +Q N T V P + + VSA+D+D F ++ Y + +SD F ID++ G I T + + + + I++ V + G
Sbjct: 1051 ISVAKRLDRETTANYTLVVRATETGSQGESVYN-NATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTS------KFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKP-------SQSAVAAITLTIND--LNDNSPQFSQSKYTLTVTENTANGS-NILRVLASDPDA--GANGRVTY-----SIISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAK---DSGVPPWVSTAFVAITVADENDNSPIFASNETSYG---IDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAF------AINAMNGVLTVKKEINRET----VPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVG--ANAVLRYS-------IISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVT----IRVINLNDITPAF---TQQNYTASVREN-SPTSTSVVKVSASDRDS---FGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAG 1593 HSP 4 Score: 157.532 bits (397), Expect = 1.037e-38 Identity = 188/684 (27.49%), Postives = 306/684 (44.74%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSIL---ENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTR-SLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIE 2562
P+F+ + E V IG + A+DKD GNN Y + NH TL++VT + V + LD E + Y+ L D G + T + ++ I + D NDN P FS Y+ VKE N+ ++SATD D NG +++ G F+I+ +G I + K DYE +T + V A + PV TA V I + +V D P+ + NYS + +VTVT+ DL + RLE+ ++S KG + S IR + E+DRE P S + ++ + SSS ++ I ++D NDN+P F P + E++ PG + ++ A D D+ NG V +++ + + SI + G+I +K+ +D E + T + VTA D G +S+ + + + DVNDN P+F S T+ EN V + D D + I+ + S N M F + + I TTR LDRE ++ + A D + T TV++ + D+NDN P PS+ N IS P + ++A D+D + Y + S + + F +D + G + R + + I + + + + G S + S+ ++ + N+PR E
Sbjct: 269 PVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNT----NH-----AFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRG-SPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKE--NTPAGTQVSATDRDSSTNGALVFGIIKGNDDGV-----FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKY----DTAQVTIFIEDVNDHSPV------FSPSNYSKQIPESTVIGSTVVTVTA--TDLDSGPRGRLEY--RLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSR-SSSTRVTIALQDINDNSP---IFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNT----DVFSINTSTGLITLKTQLDYE----KKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENM-AFAMDRFTGEI----TTRVPLDRETIASYSLTINADDGSLVRFMAAT-TVNISIADENDNQPTFTGPSRFN-----ISEDSPTGTRVGQLTATDRD-IGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAG--SPQQSITASIHVSVLDVNDNAPRFE 895 HSP 5 Score: 155.221 bits (391), Expect = 5.331e-38 Identity = 176/671 (26.23%), Postives = 302/671 (45.01%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNP-TPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFE--IRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINL-VLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
P+FN + + E++ IG T+ ATD+D G N TY++S + F+ +N T + +PLDRE YS + A+D G+ Q + I + I D NDN PQFS Y V E N ILR+ A+DPD G NG++ Y A F I+ +G I + +D E + + A + PP + STA V I+V + D P+ + N +Y I E VA+VT T ++ + Q S++ ++ + + + +EI+RE +P + I + S + +S ++ +++ D NDN P +Y G S+ EN+ T V + A D D G N + +S+ + I T GVI + +D E + + + VTATD K+ ++I + ++ND P FT + ++ EN+ ++ V ++ D+D ++ ++ K+ F I +++ I +T LDRE + QV TD+ GNP S V ++++D+NDN P ++ + ++ P ++ F ++A D D+ + I Y+L S +D F I G I + + + + + + I + G SS+ + V +
Sbjct: 1097 PVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFE----------VNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQ-SAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNA-----FRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPP-----WVSTAFVAITVADENDNSPIFAS----NETSYGIDEGVSIGSRVAVVTATDRDEG---------SNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDR-GSPMMTSDKELTVVVNDVNDNPPVFNSQSYIG--SVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGN--DEKRFKINSTSGVIMTTTPLDFE----EKSQYGLEVTATDSKYTAKT---NVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDK--FSIDQRSGII---STADVLDRELVSLYAIQVRVTDA-GNPPLSNLTWVTIKILDENDNSPKF---DSSSYSSSILENSAPSSFSFK-LAATDADEGTNAR-ITYNL-SRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTV 1709 HSP 6 Score: 130.183 bits (326), Expect = 2.479e-30 Identity = 167/654 (25.54%), Postives = 276/654 (42.20%), Query Frame = 1
Query: 601 ITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILR-LSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDRE-KIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTPS-ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNT-------TRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVID 2526
+ + ATD+D G N TY + E N F +NS T E++ PLD ET + Y+ + A DG T + I + D NDN P F+ +YK V E + I+R L+A D D GIN ++ Y + YF+++ G I K D E + ++ + A + P + A+VEI +L+V D N ++ Y+ + A+VTVT+ + D + R + G+ ++ + + R + S+ L D P + ++ + I + D NDN P + S + ENT GT ++ A D+D NG + F + K + +I + G+I + D E+ T + V A D G+ K Q++I I+DVND+ P F+ S+ I E+ + S V + D D L R +I F+++ + LDRE P ++ QV A D + + S + V + + D NDN PI P V +S ++ V+A D D +S + + Y L +DVF I+ G I + ++ ++++ +T + G S S V V++D
Sbjct: 88 VAIVTATDRDSGTNAAITYSLFSGE-----NKF------MMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHT-----TFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTS------YFTVDS-QGVIRTKGAFDRETKASYQVALRAQDGGSPS----RSGQATVEIEILDVND-----NRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYS--------FTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGV--FTIDGSTGIISIAKSPDYENK----TRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYR---------LISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGG-STSRSSSTRVTIALQDINDNSPIFQGP-----YVFRVSESSSPGHQIGQVAATDADDSSNGD-VRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVD 676 HSP 7 Score: 110.538 bits (275), Expect = 2.122e-24 Identity = 149/580 (25.69%), Postives = 246/580 (42.41%), Query Frame = 1
Query: 754 KPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYK-FDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN-NKNYSIVEENKSNFF--VAIVTVTSKEN--DLFRSIQCRLEHFQEILSLISKGDESYKVKSFE--IRTNQEIDREKIPKISTNILCKESVDSHVPSSS--AKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES--DVFDIDRQEGTIFTRREMAK 2433
+ DRE+ ++Y ++A D K G + I + DENDN P+F Y ++E + ++ ++ATD D G N I Y F K F +N +GEI PLD+E + + + A + + L I VD +N N + + K+ + VA+ ++ + DL I RL + SL+S GD SY + IRT DRE K S + + D PS S A +EI I D NDN P + T S+ E+ G + + A DKD G N + +S ++ + ++ GV+ V +D E Q ++ + ++ TD G P + + I + D+NDN P F+ S + EN + ++ D+D S N A++ +I + +F ++ + +S D E +++ V A D G P T V + + D ND+ P + PS + + + + +TV+A D D + +EY L S + F+ID G+I E+ +
Sbjct: 26 RKFDRESESRYRLTVLAQDAANRCHK-GRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENK--------FMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVPL--------------------ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSY-----SLVS-GDTSYFTVDSQGVIRTKGAFDRET--KASYQVALRAQ-DGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSF--TSGNTNHAFTLDAVTGVVTVSRSLDFE----QRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRD---------SSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDR-GVPVKYDTAQVTIFIEDVNDHSP-VFSPSNYSKQIPESTVI---GSTVVTVTATDLD-SGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDR 543 HSP 8 Score: 71.633 bits (174), Expect = 1.660e-12 Identity = 91/361 (25.21%), Postives = 157/361 (43.49%), Query Frame = 1
Query: 1432 TNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLN------TTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPG 2481
T ++ DRE + +L +++ + + I +KD+NDNAP +Y +I ENT P V + A D+D G N +T+S+ F + G I+ + +D E+ + T+ ++A D K T IT+ DVNDN P F S + E+ S V ++ D DV IN A L + ++ F ++ T + DRE + + A D G+P+ S TV++E++D NDN P + +Q A+V + +TV+A+D+D + + + Y S + F +D G + R + + + ++V + G
Sbjct: 24 TGRKFDRESESRYRLTVLAQDAAN-RCHKGRTVVVIDVKDENDNAPEFPLNSYVF--NIRENT-PAAQVAIVTATDRDSGTNAAITYSL----FSGENKFMMNSKTGEIRTVTPLDHETK----DSYTMRISAFDG----KHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVG--IN--------ARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDG-GSPSRSGQATVEIEILDVNDNRP-VFSSAQYTASVDEDVAI---GAAMVTVTASDKDNGNNAD-LRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRG 352
BLAST of Protocadherin-9 vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 142.124 bits (357), Expect = 5.699e-34 Identity = 183/692 (26.45%), Postives = 297/692 (42.92%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQT---DQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDY-FSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSH--VPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLV--LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES-DVFDIDRQEGTIFTRREMAKSDIGEHVIKI-TVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNIN 2577
P F+++ I E V + +T ATD D G+N ++I F F +N +N E++V + LD E ++ + A D GQ +Q T + I +ID NDN PQF S ++ + E R+ A D D G NG+I + F + D FSINE++G I +K+ LD EK F F + A + P TA + I++L++ D P + + + ++ + EN S + +++ V + + D + + S++S + F I I +T + SV + + SS+A + + + D N +AP + + E+ GT V ++A D+D G N ++++S+ + P S+ ET GVIK +D E + T VTATDHGI + I I DVNDN P F + E+ V E+ D D+ + ++ S F I I T + LDRE P++ V+ATD G P + V V + D D+ P+ P V V PR+ +TV A QD + E + + S VFDI+ G I T ++ E+ + + +P +T + V++ N+P +E F++N
Sbjct: 232 PQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNF---FSINRING------EVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTT----VDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSF--------MQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVP----FKEGTAQITITLLDINDNPPKFS----QEEYHTSIAEN-SRWGTSVLQVKAIDPDSGPT--------NVVYSIVSSSGHD---RCFRINPQGLITLSCTLNYNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSI-ATLVPEF---SVDETTGVIKTAGSLDRE----KVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGII---RTLKPLDRETIPEYELTVVATDQ-GTPPGQASVKVKVILEDVKDSPPLFEKPLYE---VTVPEDTPPRS-PVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRATLSPFFT------ETTVMVYLKDINDNTPVLEAFHMN 860 HSP 2 Score: 140.584 bits (353), Expect = 1.839e-33 Identity = 178/679 (26.22%), Postives = 298/679 (43.89%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR--ILRLSATDPDEGINGKIIYKFDPRFKTGALILD------YFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYS--IVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE----SYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL--TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKA--NRIFHLN------TTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKS 2499
P F+ + +SE ++G + A+D D G+N + Y +S + +F +++ +T + + LDRE +++ F + A DGG+ + G +++ I ++D NDN P F IY + E S+ +L + A+D D G NG++ Y IL+ FSI E SG + + K LD EK + V A + PP ++T +V+I++L+V D + K YS I E+ N V V R+ C E+ I G++ S + E+R Q++D E I + + ++ + + + ++I + D NDNAP ++F T I EN G +++ A DKD G NG +TFS ++ P SI E G I +K +D E + T + A D G+ K QI+IT+ D+NDN PKF+ +I EN+ + V +++ D D P + + I+ + +R F +N + +L+ + F V A+D + S T V V V D N + P S +A V + L +TV A D+D S I Y + + F +D G I T + + + + ++T + G +K+
Sbjct: 18 PQFSRLQEDASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYF------SIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLE-GYMDLTINVLDVNDNGPIFERNIYAADIPED-KSIGDFVLAVRASDADSGSNGEVKY----------CILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPP-----RSATVTVKITLLDVND-----CTPQFSKKVYSATIREDVPVNQLVTTV----------RATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTT-VDIALIDVNDNAPQFVSSHFQT-MIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLP----FSINENTGGISIKEELDRE----KVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPD-----------SGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTKHVYVFSVSASDGM----LSSTALVYVNVTDSNTHAPEFKRRSY-SAEVKEDASL---GTSVLTVLATDRDTGSNAK-ISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKA 628 HSP 3 Score: 93.9745 bits (232), Expect = 3.102e-19 Identity = 141/577 (24.44%), Postives = 244/577 (42.29%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLN--VLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE--SYKVKSFE--IRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTG-----TVDVEVIDQN 2211
P F++ I+E+ + G ++ A D D G V Y I D FR+N L TL+ L+ T + Y F + A DG + + + + + D N + P+F Y VKE + +L + ATD D G N KI Y A ++ FS++E +G I LD EK ++F V A + P + + V I + +V D +P+ + Y I + ++ V++ + D+ ++ Q I S S GD ++ + S + IRT + +DRE IP+ ++ + D P +S K+++I++D D+ P F P ++ E+T P + V + A+ +D + +S+ + P + I G I+ +D E+ + + V AT + P T+ + + ++D+NDN P + HM + E + +I D DV D + + N +V L + L+ + L + P N ++ TD L T S TG +V E+I Q+
Sbjct: 440 PKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNV-VYSIVSSSGH--DRCFRINPQGLITLSCT---------LNYNTKHVYVFSVSASDG----MLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSI-------ATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIP----QLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGR------VIEVSASDADIGKNAQI-------IYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVV---ATDQGTPPGQASVKVKVILEDVKDSPP---LFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSP--QVFDINPNTGAIQTLMKLDYETQ----SEYRLTVRAT---LSPFFTETTVMVYLKDINDNTPVLEAFHMNINVQEGKVPPEARYKIPAYDPDVSDKLTFKVMEGNAK--EWVTLNATSG--ELSVNKKLIQASKPA-NIKIAVTDGL--RTASATGSIMMTSVTTEMIQQS 954
BLAST of Protocadherin-9 vs. Ensembl Nematostella
Match: EDO41767 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3G3]) HSP 1 Score: 139.428 bits (350), Expect = 4.245e-33 Identity = 184/656 (28.05%), Postives = 296/656 (45.12%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTF--DNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAID-GGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG--LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDY---FSINEDSGEIYLKKPLDYEKQTFFKFPV-IAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKE--NDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVP--SSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDR-----EKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMT-VSANDQDQTSEFNTIEYHL-ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYT 2487
+G T+ ATD D G N TY + Q TF D + ++ L VEL DRET Y+F + A D GGQ NI+I + D NDN P FS Y V E L V +L++ A D D G+N K+ Y +L+ D F+I +G I L+KPL+ E + + V + TPP++ S A+V+I VLN+ D P E + + ++ E+ V V S+E ND+ IL G S K+ I N+++D E K+ T L E+ D+ P S++ + I + D NDN P + Y + + EN+ GT V ++ A D+D G N ++ +S+ + + I E GVIKV ID E + + + V A D G+ P+ D + I + DVNDN P+F+S+++ + E+++ N+ V + D+D N A F ++ F L++ + + D ++ +V+ D+ G+P S ++ V+ I ++ P P+ + TV+V Y N + V A D+D + + Y L SE + EGT+ R ++ G + + ++V + YT
Sbjct: 2978 LGSTVLTVGATDADVGVNAELTYSVFGQGFGTFAVDKNGKMTNL-------VEL------DRETRPFYNFMVSAADIGGQACYS----NISIHLDDVNDNRPLFSQSSYFTAVYEDAPLKKV-LLQVKADDADVGVNRKLTY---------SLVTDAGGTFTIETGTGIISLEKPLNRELKENYTLNVEVMDGGTPPLS-----SIATVQIKVLNINDVPPEFSHSIYHG---NVSEDAPIGNEVVRVRAVSRESSNDVIT---------YAILRGADSGLFSIDRKNGTIHVNRKLDYETT-KLYT--LTVEASDAGPPVLRSTSYVRISVTDSNDNGPEFSEKRY--SAKVDENSALGTFVLQVFATDRDSGTNAQIKYSIAEGN--DAKKFKIVEETGVIKVSGDIDRE----EVASYRLKVRAQDQGLPPQVADTVVDIEVTDVNDNSPEFSSTNLTTVLSESSLPNAAVIHLRPHDRDAL---------GNGAPYQFTLISGDASRFKLHSNGLITKIGDVSHSDGQYRLRVLVADN-GHPPQSTEVSITVK-IAESKTHP----PNVHPLTVYVNLYGSNLNGGVIGRVKATDKDG----DLLHYSLVSSEQSSLLMISDEGTVRARANISP---GTYNLNVSVTDKRYT 3556 HSP 2 Score: 124.79 bits (312), Expect = 1.177e-28 Identity = 152/601 (25.29%), Postives = 272/601 (45.26%), Query Frame = 1
Query: 733 TVELKVFKPLDRETTNKYSFDLMAIDGGQTD-QKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHV-ISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
T ++V LD E N+Y +M ++ + + + ++++D ND P+F S Y + E ++ ++LR+ A D D G NG + Y + K L+ + F I++ +G I + LD EKQ F+F V A + T TS +V VL+V D P + + ++ + V+E+ + ++ T+T+ + DL L +F ILS + + K+ I + +DRE + NI S + +S A+++I I+D NDN P T I ENT G+ V + A D D G N +T+S+ F + G K+ ++++ + F +V+A D G + ++ ISI + DVNDN P F+ S + E+ + +++ +D DV + L A F I + I L + L+RE + V D G P S TV ++V++ ND + P +++ H +S P + + V A ++ +++ T ++S +F IDR+ GTI R++ + + + + G ++S+ V + +
Sbjct: 2706 TGRVRVIGRLDYEIRNRY---VMIVEANVSAINQIARTVVVVQVLDINDVTPKFVSDPYLASIPENIDIGSKVLRVFAEDLDSGSNGMVTYALVSKDK---LVKEKFDIDQHTGWITTRGALDREKQPSFEFQVRATDNG----TTRLTSLTTVRAIVLDVNDTPPK----FSQSEFMASVKED-ALIGQSVTTITATDEDL----NTELYYF--ILSGDPQARFGIERKTGVIFVHGSLDRESVGSYDLNI----SASDGLFTSFAQMKIDIEDANDNPPICTQSIYVEHIKENTPLGSTVLTVGATDADVGVNAELTYSVFGQGFGTFAVDKNG------KMTNLVELDRETRPF--YNFMVSAADIGGQACYSN--ISIHLDDVNDNRPLFSQSSYFTAVYEDAPLKKVLLQVKADDADVGVNRKLTYSLVTDAGGTFTI-ETGTGIISLE--KPLNRELKENYTLNVEVMDG-GTPPLSSIATVQIKVLNIND-----VPPEFSHSIYHGNVSEDAPIGNEVVRVRAVSRESSNDVITYAILRGADSGLFSIDRKNGTIHVNRKLDYETTKLYTLTVEASDAGPPVLRSTSYVRISV 3262 HSP 3 Score: 107.457 bits (267), Expect = 2.503e-23 Identity = 166/680 (24.41%), Postives = 294/680 (43.24%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL--NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVK--SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGEN---GRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVG--EIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSL-DREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQN---DNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLES--ESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVV 2520
P+F++ E+ + E++ +G T+T A+DKD G N TY+I F FR+N ++ + SV LD E Y ++ A+D +QK GS ++ + ++D NDN P + V+E L N+V + + A+DPD G G+I + + F+I+ SG I L++ LD+E+++ + V + P T +V N P+ L + EN V V ++ K D + + + + G + + + + IRT E+D E + K+ +S+ ++ + I I D ND AP TY+ P + EN G+ V ++ A+D D G + +T E++ F I G+I +D E + + V+A+D G P STD+ ++ I D NDN P+F + + + G ++ D+D+ + +L +K F+I ++ IF T SL D E ++ ++A D+ G P S + V ++VI N N P + + Q +A + + N + + A D D F+ I Y++ S + F IDR G I + + + + +++ + GY + V +N++
Sbjct: 789 PVFDKTVYEVTLPENITVGQTVTHVHASDKDQGTNGFITYQIVND----FGGKFRVNRISGVVSVG------DYLDYEEQEMYKIEIQAMDSSVDNQKVGSTHVIVTLLDINDNSPIVKPKKFNVTVQEDLLVNAV-VTSIHASDPDSGPGGEIEFSLPESTRK-------FNIDSKSGVIRLRQRLDFEQKSTYNLTVRVTDKGSPALFTDVEVVVNVLDVNENSL-APVFSGGRILETS----INENSP---VGTVVISPKATD-------QDSWYLKYAIIDGTGVDKFIIDPDTGAIRTAGELDHEVADHYWLTVQAKDG-ESYPLYTNIPVLINIVDLNDEAPYFAPSTYY--PVLAENLPSGSSVVQVTAKDPDSGGSLLRYTITKGNEQNNF------VIDPQSGLITTLRPLDREFK----SEYKLTVSASDGGTPPVSTDVTFTVKITDENDNQPEFKEKQYVVGVFARQATSKSFGLYQVVATDEDIGSNADLRYSITKGNRDNKFIIDSRSGEIF---TNVSLVDGE---SYDLTIVAEDN-GLPKLSTSTNVLIDVIQGNKPSKNAP-VFWNKQYSADIQEDKRI---NSFVLIIGAEDPD----FDQITYNIASGNHGNKFTIDRYGGFITVAHSLDREEKSFYSLRVEATD-GYNTASVPVTINIL 1406 HSP 4 Score: 105.145 bits (261), Expect = 1.205e-22 Identity = 179/700 (25.57%), Postives = 298/700 (42.57%), Query Frame = 1
Query: 535 YPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEH-------FQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT-YFGTPSIL-----ENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP--------IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLE--SESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VIDASTAKSNSP 2553
+P+F + I ISES I ++ +ATD+D G N + Y I + D+ F +N+ T EL V PLDRET + Y+ ++ A+D G+ +K+ + ++I D ND P F +Y+ + E + + + + A+D D+G NG I Y+ F F +N SG + + LDYE+Q +K + A++ +S + ++ +V L+I N N IV+ K N VT +E+ L ++ + EI + + + + KS IR Q +D E + ST L D P+ +E+++ + N +L F IL EN+ GTVV A D+D + + +++ ++ I G I+ +D E +A LT V A D P T++ + I I D+ND P F S + EN S V ++ +D D + +K FVI ++ I T R LDRE ++ V A+D G P S T V++ D+NDN P + +F Q + +++ V A D+D S + + Y + + + F ID + G IFT + + + + I + G + +S V + VI + N+P
Sbjct: 683 HPVFRSHDQNIHISESTPIATVVSQFMATDEDKGYNGLVLYSIVEGD---VDSVFNINMF------TGELTVAMPLDRETISSYTLNISAVDCGK-HRKSAYTILNVKITDVNDCSPVFDKTVYEVTLPENITVGQTVTHVHASDKDQGTNGFITYQIVNDFG------GKFRVNRISGVVSVGDYLDYEEQEMYKIEIQAMD----------SSVDNQKVGSTHVIVTLLDI------NDNSPIVKPKKFN-------VTVQEDLLVNAVVTSIHASDPDSGPGGEIEFSLPESTRKFNIDSKSGVIRLRQRLDFE---QKSTYNLTVRVTDKGSPALFTDVEVVVNVLDVNENSLAPVFSGGRILETSINENSPVGTVVISPKATDQD---SWYLKYAIIDGT--GVDKFIIDPDTGAIRTAGELDHE--VADHYWLT--VQAKDGESYPLYTNIPVLINIVDLNDEAPYFAPSTYYPVLAENLPSGSSVVQVTAKDPDSGGSLLRYTITKGNEQNNFVIDPQSGLI---TTLRPLDREFKSEYKLTVSASDG-GTPPVSTDVTFTVKITDENDNQPEFKEKQYVVGVFARQATS----------KSFGLYQVVATDEDIGSNAD-LRYSITKGNRDNKFIIDSRSGEIFTNVSLVDGE--SYDLTIVAEDNGLPKLSTSTNVLIDVIQGNKPSKNAP 1314 HSP 5 Score: 104.375 bits (259), Expect = 2.017e-22 Identity = 154/608 (25.33%), Postives = 247/608 (40.62%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNK--YSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSI-VEENK--SNFFVAIVTVTSKENDL---FRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
PIF+E ++ +E+ G +T+ ATD D GN TY I + FR++ + + L DRE +++ S + A DGG + G + + +IDENDN P F Y + + +L SA+DPD N + Y G F+IN +G I + + + + FF NP L S ASV+I+VL + + + Y + V EN + V N + +R I+ ++ + S G +V+ R + EI + + N+ + V + + + D ND P Y SI EN G+ V ++ A+D D G NG VT+++ E I + G I + +D E + V ATD+G ++ + + DVND PKF+ S + ++ E+ + V I D+D++ ++ + S +P F I +K IF SLDRE ++ + A+D L T+ +D+E D NDN PI + V I P +TV A D D
Sbjct: 2442 PIFSEDVYKVSFNENYPEGTFVTMVSATDLDSGNYAHLTYSIDSVDAM---RKFRIDADSGM------LYSRLMFDRENSSQAIMSVPIRATDGGG---RFGFCVVEVHLIDENDNQPIFELKNYDTTISRSVTMGTPVLMTSASDPDASSNAALTYVI-----VGHQTPPVFTINAATGVIQVSREPEVKSYNFFVLVKDGGNP-------LLRSIASVKITVLE-----RDARILHFGKSKYDVTVGENAEMGQIVTGLNLVVPGGNPVDVDYRIIKGNNDNNDRKFGVDSTG----RVRVIG-RLDYEIRNRYVMIVEANVSAINQIARTV------VVVQVLDINDVTPKFVSDPYLA--SIPENIDIGSKVLRVFAEDLDSGSNGMVTYALVSKDKLVKEKFDIDQHTGWITTRGALDREKQ----PSFEFQVRATDNGTTRLTSLTTVRAIVLDVNDTPPKFSQSEFMASVKEDALIGQSVTTITATDEDLNTELYYFILSGDPQAR-FGIERKTGVIF---VHGSLDRESVGSYDLNISASDGLF--TSFAQMKIDIE--DANDNPPI----CTQSIYVEHIKENTPLGSTVLTVGATDAD 2991 HSP 6 Score: 86.6557 bits (213), Expect = 4.655e-17 Identity = 140/582 (24.05%), Postives = 238/582 (40.89%), Query Frame = 1
Query: 736 VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTAS--VEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKG--DESYKVKS----FEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKP-GTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKS---TDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKD-PKF-NFQVIATDSLGNPTNSVTGT-VDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYH--LESESDVFDIDRQEGTIFTRREM 2427
+++K K L+RE+ Y +++ D +T + + I + D NDN P F Y + + E + I R+ A D D G NG I Y F + + F+IN SG + + + L + + V+A + P + + V + +N + + N V E S A + + K+ I R+E I+ G D ++ +KS + ++ + +DRE P L + V + S + + + D+NDN P + L P T V +++A DKD G NG + + + + L I G I K +D ES + V A D G+ +S + + + + I D ND+ P+F + + E+ + V + ED D + + N +PF I I TT +LDR+ P+F N QV A+D G P T T V + V + NDN P++ Q + ++ P TV+A D D + + ++ Y + F +D + G + T R +
Sbjct: 55 MDIKTSKRLNRESVASYELNVVVQDK-RTKRTLDRTKVNITVDDSNDNRPIFLKKKYLKTIPEDIPMHTSIARIEAVDADVGPNGLIYYSFKEKTTS-------FAINPISGVVSVAQKLSNSAR-IHRLTVVARDRALPPSKPKSSRNCQLIVNVQAVNQFSPEFSVKTQLQN------VSEGTSGIVYATLGIIDKDKGSNGDID-RVE--------ITSGNLDGAFSIKSSPNDYAVQVIKPLDRELAPFGYNVTLTAYDKGTPVRNGSYVLRVNVLDENDNNPEFNQSRYITNLSELAPIHTPVLRVLATDKDAGSNGNIMYVITRGN--ELGKFEINSKTGQIYTKGDLDYESR----QRFDLTVAALD-GVPLQSRKISTVPVVVNILDANDHDPEFKAPEYRKDLYEDLTPGTSVFTVSAEDLDSGGNGKVRYSLANLRPVPFEIEPDTGII---RTTTNLDRDTGLPEFINLQVRASD-FGTPLRRETETLVKMRVKEMNDNAPVL---KQFKCNI-LVDRNAPVGVLITTVTAIDIDISDKDQSLMYKSTFGNTGKAFSLDPKTGELRTARSL 597 HSP 7 Score: 77.411 bits (189), Expect = 3.293e-14 Identity = 137/588 (23.30%), Postives = 240/588 (40.82%), Query Frame = 1
Query: 760 LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRIL-RLSATDPDEGINGKIIYKF---DPRFKTGALILDYFSINEDSGEIYLKKPLDYEK-QTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDE----SYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS-SSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLE--PRNYKFMTVSANDQDQTSEFNTIEYHLESESDV--FDIDRQEGTIFTRREMAKSDIGEHVIKITV 2469
LDRE+ + Y + A D + +++ID NDN P F + Y ++ G+ I+ + ATD D G N + Y DP YFSI+ +GE+ +++ LD K F V A T L+ + A V+I V++ + P+ + ++S V + + +VT+ R + IL I+ GD S K+ + +D E K L + D+ S S +++ + D ND AP Y T I E+T T V + A D D G N + + ++ + + I + GV+ V +D ES + +++ A D G + + ++ + + D NDN P+F S +I+ + FV I D D D L + F I ++ I +R + ++ + V +DS+ + T V V + D ND+ PI + V+ +S+ E P VSA D D + + + Y ++S + F ID G +++R + + + ++ + +
Sbjct: 1993 LDRESIDAYQVIVQARDD-SVPPNVAQAAVHVQVIDRNDNQPVFINSPYFIVLQLGVAQGTIIGQAQATDADIGSNANLRYDLIGGDP---------GYFSISRKTGEVVVRRTLDDVKVPRLFTLMVEA-------TDGLFRTEAVVKIKVVD-KETPV------FDQLSFSKVLAEDTPIGSEVTSVTA-----------RSPNGAGILYSITGGDPVNQFSIDFKTGVVTLVSSLDYETRTKYK---LVVRATDARTSSHSDVAVDVTVTDVNDVAPAFNRSLYLAT--ISESTPVDTAVVTVKAIDGDSGINKEINYFIQNVSRVG-AFFKIDKKSGVVFVAKSLDYESRVVH----EMIIVAADEGKPSLTGETRVRVVLMDANDNAPRFDKSMYAASILGSASPGQFVTRILATDPDEGDAKKLRYSITGGQGRQHFQIDSQSGVI---TLSRVVGIKQGKVYGLDVEVSDSV----HVSTSKVRVIIGDTNDHSPIF------SEDVYKVSFNENYPEGTFVTMVSATDLD-SGNYAHLTYSIDSVDAMRKFRIDADSGMLYSRLMFDRENSSQAIMSVPI 2521 HSP 8 Score: 70.8626 bits (172), Expect = 3.071e-12 Identity = 123/452 (27.21%), Postives = 198/452 (43.81%), Query Frame = 1
Query: 592 GHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIY--KEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPL-DYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYS--IVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVK----SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPS-ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSA-FPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTS 1911
G ++ A D D G + + Y I++ + N+F ++ + L + +PLDRE ++Y + A DGG T + ++I DENDN P+F Y F ++ + S + ++ ATD D G N + Y + I+D SGEI+ L D E + ++A + P L TST +V I V+ ++P + N NK YS I E+ + N FV I+ + F +I I+ G+ K I +DRE+ S + E+ D + ++S + I I D NDN+P + + EN+ GT+V + +D D G NG V + + ++A S I G I +D E+ Q LTI A+D GI + T + +++ DVND+ P+F S
Sbjct: 1120 GSSVVQVTAKDPDSGGSLLR-YTITKGNEQ---NNFVIDPQSGL------ITTLRPLDREFKSEYKLTVSASDGGTPPVST-DVTFTVKITDENDNQPEFKEKQYVVGVFARQATSKSFGLYQVVATDEDIGSNADLRYSITKGNRDNKFIID-----SRSGEIFTNVSLVDGES---YDLTIVAEDNGLP---KLSTST-NVLIDVIQ-GNKPSK-NAPVFWNKQYSADIQEDKRINSFVLIIGAEDPD-------------FDQITYNIASGNHGNKFTIDRYGGFITVAHSLDREEKSFYSLRV---EATDGY-NTASVPVTINILDVNDNSPQPARREYRAHVAENSDVGTLVTTV--KDPDAGVNGEVEYCIVQTAKAESASLFKIESHSGRILTVKPLDYET--MQEHVLTI--KASDRGIPKRETLFSVVVSVDDVNDHKPEFLS 1523 HSP 9 Score: 70.4774 bits (171), Expect = 4.603e-12 Identity = 151/661 (22.84%), Postives = 270/661 (40.85%), Query Frame = 1
Query: 613 VATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDEND---NMPQFSSPIYKEFVKEG--LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDL-------FRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPT-LTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLV---LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVI-------SYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV 2517
VATD+D G+N Y I++ DN F ++ + ++F + Y ++A D G T S N+ I +I N N P F + Y ++E +NS +L + A DPD +I Y + F+I+ G I + LD E+++F+ V A T T++ V I++L+V D P +Y + V EN V + T K+ D + +Q + + S VK + T QE ++L ++ D +P + + + D ND+ P L+ + + K GT + ++IA DKD+G N ++ +S+ + + LS+ + GV+KV + S+L L V +TD G P T + + + ++ + N F ++ EN+ + + + V++ I V + ++P F + +++ I + +S D E+ ++ A + G ++++ V V + D+NDN PI T HV + L+ + + + V A DQD + + T E S DVF I G I T + + ++ KI V + G + + V +
Sbjct: 1233 VATDEDIGSNADLRYSITKGNR---DNKFIIDSRSG--------EIFTNVSLVDGESYDLTIVAEDNGLPKLST-STNVLIDVIQGNKPSKNAPVFWNKQYSADIQEDKRINSF-VLIIGAEDPD---FDQITYNI-----ASGNHGNKFTIDRYGGFITVAHSLDREEKSFYSLRVEA-------TDGYNTASVPVTINILDVNDNSPQPARREYRAH-----VAENSD---VGTLVTTVKDPDAGVNGEVEYCIVQTAKAESASLFKIESHSGRILTVKPLDYETMQE-----------HVLTIKASDRGIPKRETLFSVVVSVDDVNDHKPEFLSPLFESEVDVSAKAGTAILRVIATDKDDGTNSKLKYSIVSGN--TNKSLSVDQNSGVVKVAGRL---STLVHQYALK--VQSTDGGEPPLKTQVDVKVKVRGIVKNF-AFEKPKYEVSLPENSPPDQAIATV------VYNGILPVYEIVPGRSPCWRDFTVQRQSGVII---SKKSFDAEEVTHCKLEIRANSTDGQHSSTL---VIVTIQDKNDNQPIF---EHARITGHVTEGSPQGTAVLDHKGSQLVAV-ATDQDISGDKLTYEIVETSARDVFSIHPATGAITTAKVLDYEVTPQYAFKIKVTDSGNPRLSAFADVKI 1822 HSP 10 Score: 70.4774 bits (171), Expect = 4.801e-12 Identity = 146/634 (23.03%), Postives = 253/634 (39.91%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLM--AIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTL-TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILK-KANRIFHLNTTRSL-------DREKDPK--FNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRRE 2424
V G I ATD D G+N Y + +P F +++ T E+ V + LD + F LM A DG + + I+++D+ P F + + + E + ++A P+ I+Y TG ++ FSI+ +G + L LDYE +T +K V A + T+S ++V + N Y + A+VTV + + D I + +F + +S+ +K+ KS + + +D E ++ ++ + D PS + ++ +++ D NDNAP SIL + PG V +I+A D DEG+ ++ +S+ + ++ I GVI + ++ + + L + V+ + H K + + I D ND+ P F+ + EN + +FV + D D S N A L + I A R F ++ + DRE + + + ATD G V V+V +ID+NDN PI + + ++ P + SA+D D +S + Y + VF I+ G I RE
Sbjct: 2048 VAQGTIIGQAQATDADIGSNANLRYDLIGGDPGYF----------SISRKTGEVVVRRTLDDVKVPRL-FTLMVEATDGLFRTEAV----VKIKVVDKE--TPVFDQLSFSKVLAEDTPIGSEVTSVTARSPN---GAGILYSI-----TGGDPVNQFSIDFKTGVVTLVSSLDYETRTKYKLVVRATD----------ARTSSHSDVAVDVTVTDVNDVAPAFNRSLYLATISESTPVDTAVVTVKAIDGD--SGINKEINYF---IQNVSRVGAFFKIDKKSGVVFVAKSLDYES--RVVHEMIIV-AADEGKPSLTGETRVRVVLMDANDNAPRFDKSMYAASILGSASPGQFVTRILATDPDEGDAKKLRYSI--TGGQGRQHFQIDSQSGVITLSRVVGIKQ--GKVYGLDVEVSDSVHVSTSK-----VRVIIGDTNDHSPIFSEDVYKVSFNENYPEGTFVTMVSATDLD----------SGNYAHLTYSIDSVDAMRKFRIDADSGMLYSRLMFDRENSSQAIMSVPIRATDGGGRFGFCV---VEVHLIDENDNQPIFELKNYDTTISRSVTMGTP----VLMTSASDPDASSN-AALTYVIVGHQTPPVFTINAATGVIQVSRE 2611 HSP 11 Score: 67.781 bits (164), Expect = 3.015e-11 Identity = 109/446 (24.44%), Postives = 181/446 (40.58%), Query Frame = 1
Query: 883 PQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILD-YFSINEDSGEIYLK--KPLDYEKQTF-FKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQ--EILSLISKGDESYKV----KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEII-----IKDQNDNAPTLTYFGTPS----ILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIK-PKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHD-DINLVLRSK-NPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSL 2154
P+FS + V EG + + L D D+G NG I R + + LD FSI + ++ KPLD E F + + A + PV Y + +NV DE N+ N E N+S + + + + R + + I+ +I++G+E K K+ +I T ++D E + + + VP S KI + I D ND+ P F P + E+ PGT VF + A+D D G NG+V +S+ E I G+I+ + +D ++ L +F L V A+D G + T+ + + ++++NDN P + N + + D D+ D D +L+ +S F + K + + R L RE F + ATD +
Sbjct: 209 PEFSVKTQLQNVSEGTSGIVYATLGIIDKDKGSNGDI-----DRVEITSGNLDGAFSIKSSPNDYAVQVIKPLDRELAPFGYNVTLTAYDKGTPVRNGSY-------VLRVNVLDE---------NDNN---PEFNQSRYITNLSELAPIHTPVLRVLATDKDAGSNGNIMYVITRGNELGKFEINSKTGQIYTKGDLDYESRQRFDLTVAALDG----VPLQSRKISTVPVVVNILDANDHDPE---FKAPEYRKDLYEDLTPGTSVFTVSAEDLDSGGNGKVRYSLANLRPVPFE---IEPDTGIIRTTTNLDRDTGLPEFINLQ--VRASDFGTPLRRETETLVKMRVKEMNDNAPVLKQFKCNILVDRNAPVGVLITTVTAIDIDISDKDQSLMYKSTFGNTGKAFSLDPKTGELRTARSLRGLQRE----FTLIIKATDGI 614 HSP 12 Score: 58.9214 bits (141), Expect = 1.311e-8 Identity = 142/629 (22.58%), Postives = 248/629 (39.43%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVEL--KVFKPLDRETT--NKYSFDLMAIDGGQTDQKTG-SINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGI-----NGKI-IYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREM 2427
K G I +ATDKD G N Y I NT S++V+ V K R +T ++Y+ + + DGG+ KT + + +R I +N F P Y+ + E + PD+ I NG + +Y+ P + F++ SG I KK D E+ T K + A + + TL T + +++ + + V ++K + VA+ T D +L + EI+ ++ S + I T + +D E P+ + I +S + + S+ A ++I + D ND AP TY T + + GT V + A D D N +TFS+ + E ++ GV+ V + ++L + T TI +T +D + ++ I +++ + +F+ + ++ E +S + + + I + NP+ L ++ + + + LDRE + V A D P N V V+VID+NDN P+ I N+ V+ + A D D S N + + F I R+ G + RR +
Sbjct: 1534 AKAGTAILRVIATDKDDGTNSKLKYSIVSG--------------NTNKSLSVDQNSGVVKVAGRLSTLVHQYALKVQSTDGGEPPLKTQVDVKVKVRGIVKNF---AFEKPKYEVSLPEN-----------SPPDQAIATVVYNGILPVYEIVP---GRSPCWRDFTVQRQSGVIISKKSFDAEEVTHCKLEIRANSTDGQHSSTLVIVTIQDKNDNQPIFEHARITGHVTEGSPQGTAVLDHKGSQLVAVATDQDISGD-------KLTY--EIVETSARDVFSIHPATGAITTAKVLDYEVTPQYAFKIKVTDSGNPRL-SAFADVKIHVTDINDIAPVFSASTYHAT--VYLPSYAGTRVTMVTATDGDSAAN--LTFSLARQ---DTELFAVNPLTGVVTVSN-----AALLRRDTYTIKLTVSDGN---HTAHARVRIRCENLPSSDLQFSRKNYSASVREGVSVDSELVTVRALGYPIGSTITYTI--INPSELFHIV--PSTGVMSIRAGFDLDRESIDAYQVIVQARDD-SVPPNVAQAAVHVQVIDRNDNQPVFI----NSPYFIVLQLGVAQGTIIGQAQATDADIGSNANLRYDLIGGDPGYFSISRKTGEVVVRRTL 2097 HSP 13 Score: 52.7582 bits (125), Expect = 9.620e-7 Identity = 96/375 (25.60%), Postives = 152/375 (40.53%), Query Frame = 1
Query: 1513 PSSSAKIEIIIKDQ--NDNAPTLTYFGTPSILENTKPGT--VVFKIIAQ-DKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKS---------IIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLV-LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNS---VTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDV-FDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY-TSMKSSVQVNVVIDASTAKSNSPRIENFNIN 2577
P SS ++I+ Q N +P F + L+N GT +V+ + DKD+G NG + +E S G DG +KS I + LA F + +TA D G ++ + + + D NDN P+F S I + E ++ V + DKD + N++ + ++ + F I K +I+ T LD E +F+ V A D G P S T V V ++D ND+ P P + L P F TVSA D D + Y L + V F+I+ G I T + + I + V + T ++ + V + N+P ++ F N
Sbjct: 189 PKSSRNCQLIVNVQAVNQFSPE---FSVKTQLQNVSEGTSGIVYATLGIIDKDKGSNGDID---------RVEITS-GNLDGAFSIKSSPNDYAVQVIKPLDRELAPFG-YNVTLTAYDKGTPVRNGSYVLRVNVLDENDNNPEFNQSRYITNLSELAPIHTPVLRVLATDKDAGSNGNIMYVITRGNELGKFEINSKTGQIY---TKGDLDYESRQRFDLTVAALD--GVPLQSRKISTVPVVVNILDANDHDPEFKAPEYRK---DLYEDLTPGTSVF-TVSAEDLDSGGN-GKVRYSLANLRPVPFEIEPDTGIIRTTTNLDRDTGLPEFINLQVRASDFGTPLRRETETLVKMRVKEMNDNAPVLKQFKCN 539
BLAST of Protocadherin-9 vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 138.272 bits (347), Expect = 7.960e-33 Identity = 172/645 (26.67%), Postives = 287/645 (44.50%), Query Frame = 1
Query: 535 YPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQF-SSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFD---PRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKS-NFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLT---YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLV--LRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESES-DVFDIDRQEGTIFTRREMAKS 2436
YP+F + E + IG + +A D D G+N YKI D F+ +N T + + LD E TN+Y + A D G+ QKT + I + D NDN P F +PI + + + + A D D G+N +I Y D PR +F IN ++G I P+D E+ + + V A + LY +TA+++I + ++ D N ++N + V E++ NF V +T + +++ R+ G S +K+ ++ +D E +P+ + +I + + S +S +++ D NDN P T + GT S EN GT V K+ A D+D G N +T+S+ ++ SI + G+I SI+D E F LT+ T + + ST ++I+ + D NDN PKF S + + EN+ + + V+D D ++ ++ + S N F I + L+TT LDRE + V A D + P + + + + DQNDN P+ Q + IS L P + ++A+D+D S N I Y L +++ V+ ID + G +++ S
Sbjct: 1221 YPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNT---DGTFK------INETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRA--------HFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLY-NTATLKIIIQDLND-----NAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVS-------PDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATD-LGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVS--ENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGV--EMDKFSIDKHSGLIVTNSILDREKKDTYF--LTVHATGVSYPFRVSSTSVRIN--VMDRNDNPPKFISPVVTLKVPENSPAR-LIYTLTVQDLDYGNNTKVLYSIMSGNTDGA-FTIGRSTG---ELSTTTKLDRETKASYQLSVQAKD-ITPPYYTAFANITIFIEDQNDNPPVF----QQSLYSSTISELTPPGTSILNLTASDKDSGSNGN-IVYTLSNDTYGVYSIDSRTGIVYSAARFETS 1815 HSP 2 Score: 138.272 bits (347), Expect = 8.813e-33 Identity = 152/556 (27.34%), Postives = 247/556 (44.42%), Query Frame = 1
Query: 613 VATDKDFGNNQVETYKISRQEPRTFDNHFRL-NVLNTLNSVTVELKVFKP---LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFE-------IRTNQEIDREKIPKISTNILCKESVDSHVPSSSAK-IEIIIKDQNDNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKS--AFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPI 2226
+A D DFG+N ++Y I N F+L + +T + +L V +DRE + Y ++ A DGG G + ++I + D NDN P+FS+ Y + E ++ IL++SA+D D G N +I Y + A+ F I+ +G I LDYE + + +I V + +S+A V I VL+V D I+V Y +Y + E VA V+V+ ++ + LE G + Y F+ I Q +DRE +C + D P ++ K I + D ND AP TY + EN T+V + A D+D G N + +++ + + L + +I + G+I + +D E Q + + V D G P S + + + + D NDN P F S ++ EN+ S V ++ +D D+ ++ +L+L S PF + + + +R+LD E + FQV ATD G N+ TV V + D NDN P+
Sbjct: 80 IAVDSDFGSNSTQSYTIVSGN---VGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANH-GFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAI----FGIHPTTGVIVNNVRLDYEAKRSY---LIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLE-----------GGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDP--PRTTEKSFRINVGDVNDCAPKFDRHTY--ETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDRE----QIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGEN-SLILYSILTPNTPFFLDPRKGLV---TNSRTLDHEVQSSYTFQVAATDGGGRSCNA---TVHVSLTDLNDNQPV 598 HSP 3 Score: 134.42 bits (337), Expect = 1.182e-31 Identity = 147/585 (25.13%), Postives = 263/585 (44.96%), Query Frame = 1
Query: 742 LKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRIL-RLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNP-TPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS--FEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPG 2481
+ + K LDRET + Y + A+DGG D +I + I ++D ND P FS Y ++E ++ ++ + A D+G N +++Y + T ++L IN +G +YL+ +D+EK V A + TPP+ A+V I+V+++ D + N + + + E+ V+V ++ + + SL+S + + S + + ID + T + + S SS+A +E+ + D ND +P + T +LE T P + + +++A D D GENGR++++ + S L G G I +KS +D E + V A DHG +S+ + + + DVNDN P F + F + EN +++G + D D + ++ R + + F++ K+ +I T++ LDRE + F ++ATD +P T V V V D ND P S+N +V V L P +T+ A D DQ + I Y + + F +++ G + + + H++ + + G
Sbjct: 655 ITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAI-VNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSIS-KGNTDNIVL----INS-TGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLF-----GYANVTIAVIDINDNSPQFNSSSILVR---LPEDTPIGHTFYTVSVFDADSGVLGRVS---------FSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNG---GKIFIKSKLDRE----DIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRF-DTQVAQFIVDKQTGKI---TTSQVLDREAKASYVFSIVATDGGSSPRVDKT-QVTVIVRDVNDCSPKF---SKNKYSVTVNEDL-PVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKG 1199 HSP 4 Score: 132.88 bits (333), Expect = 3.809e-31 Identity = 173/678 (25.52%), Postives = 285/678 (42.04%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINE-----DSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEP-LEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV---KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTPSIL----ENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
P FN+ + + E+ G + +A D D G N + Y I F + + V N+ + LD E + Y+F + A DGG ++ + + + + D NDN P F Y E+ + I +L A D D P+F I++ + +E SG I L K LD E Q + V AV+ ++ + A V I+VL+V DEP + +Y N++I E +++ + V S++ E++ ISKG+ V + + E+D EKIP + + K D P A + I + D NDN+P F + SIL E+T G + + D D G GRV+FS+ + P + ++ G + + +ID +S +T + V A D G P+S+ + + + DVND P F + ++E +S + E+ D D ++ + + L+ +IF LDRE ++N +VIA D G P S + V V V D NDN P Q + + EP VSA+D D+ S + + Y +++ F +D+Q G I T + + + +V I + G + QV V++
Sbjct: 496 PYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNS-----------RTLDHEVQSSYTFQVAATDGGG---RSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDS-----------PKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSV----NKAIVNITVLDVNDEPPIFSKAEY----NFTIQEHSQALSVIGHVHAISRDKGTN----------AEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAK---DKGTPPLFGYANVTIAVIDINDNSPQ---FNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSN--PGTLF-NLDSNTGALSLTKLIDYGNSARSYT---LPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIF---IKSKLDREDIEEYNLKVIAIDH-GTPRRSSSADVKVIVDDVNDNNPHF----QQASYAFFVKENEPVATYLGAVSASDSDEGSNGH-VTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIV 1109 HSP 5 Score: 107.457 bits (267), Expect = 2.157e-23 Identity = 146/552 (26.45%), Postives = 234/552 (42.39%), Query Frame = 1
Query: 760 LDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR---ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPT-PPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFV--AIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDES---YKVK-SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQN--------------DNAPTL---TYFGTPSILENTKPGTVVFKIIAQDKDEG-ENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
LD E+T + L+A G G + + I +ID NDN P F + E + + +++++ATD D G NGK+ Y + G F+I+ +GEI K LD E F + + PP ++ V++ V ++ D P D L+ N I E+ ++ V + T T KE+ L +++ IL + + +S ++K SF I + +ID KI + I + ++D + S +I + DQ P +YFG + EN GT V + D G GR+++++E S Y IG+ GVI V +D E+ +VV+A D K + + I + DVND P F S + E + V + DKD + + ++S + F I +K I T R+LD E + V ATD G+P +V + V+D NDN P+ P N+ V V+ L P N + ++A D+D
Sbjct: 2025 LDYESTKNFRLHLVATPQGWVSLN-GYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGV-----FTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPP-----KSTNCQVKVVVTDLNDNPPLF--DPLSEVN--IREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDY-KIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITREPKFELPSYFG--KVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENS-----NYFRIGQRSGVISVNKPLDYETK----RRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKG-SFAIDRKTGVI---RTQRALDHETIKTHHVSVRATDE-GSPPMHTDVSVTIRVLDLNDNPPVFRVPGPND--VQVLENL-PLNSRLYEINATDRD 2541 HSP 6 Score: 105.145 bits (261), Expect = 1.049e-22 Identity = 159/573 (27.75%), Postives = 249/573 (43.46%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDF-GNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL--NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESV--DSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR-SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFP 2238
P F++ + ++E + +G ++ +ATD D G N TY I P+ F +LN VT L + PLDRE T+++ ++A D G I I ++D NDN P F + + V E L SV + + A D D+G NGK+ YK G F INE +G I + LD+E + V A + T Y ++ +Y E N + KN I+ N + T K +D + R+ + I S + ++ I+T IDRE+I + S + + + ++A ++III+D NDNAP ++E+ V I A D D G+ G V + + P S+ GV+K+ +D E + Q+T + ++ATD G P ++ ++ + DVNDN P+FT I T+ EN + V ++ D+D + L M F I K + I T LDREK + V AT + P + +V + V+D+NDN P I P
Sbjct: 1117 PKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIV-AGPKAF----------SLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSV-VAAVLAVDSDQGDNGKVRYKIVNGNTDGT-----FKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSY--------QLVTIYVEDANDNRPTFD-KN-PIITWIYENVPINTNVTTIKAHDDDSGLNSRI--WYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVS---PDTGKFSLDLKTGVLKLIGSLDYED-VPQYT---LHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIV---TNSILDREKKDTYFLTVHAT-GVSYPFRVSSTSVRINVMDRNDNPPKFISP 1649 HSP 7 Score: 92.4337 bits (228), Expect = 8.235e-19 Identity = 141/576 (24.48%), Postives = 239/576 (41.49%), Query Frame = 1
Query: 583 VKIGHTITLPVATDKDFGNNQVETYKI-SRQEPRT-FDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMP----QFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKV--------KSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIII--KDQNDNAPTLTYFG----TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKK-ANRIFHLNTT------RSLDREKDPKFNFQVIATDSLGNPTNSVT-GTVDVEVIDQNDNFPI 2226
+ +G +I A+DKD G N Y I + +P+ F H V+ +N+V LD E Y + A D G + Q + S + I ++D NDN P ++ + + ++ R+S +D D G NG++ + G + + +N++S I + + LD E F + ++ P T+ S I+V +V D + + + + E N VAIV ++ E++ I+ ES S I T ++DRE+IP++ +L D P S +I+ D NDN P YF S+ EN+ G+ V +++AQD D GEN + +S+ P + G++ +D E ++ T V ATD G +S + + +++ D+NDN P F S EN + +++ D+D S A+ F+I + A+ +F ++ + + LDRE + V A D G +SV V++ V+D ND PI
Sbjct: 185 IDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVI--VNNVR--------LDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEG--GDGYFSMKFDVLNDES-IIAVGQSLDRETHDHFFLKAVCIDKGDPPR----TTEKSFRINVGDVNDCAPKFDRHTYETR---VWENATVNTLVAIVNAVDQD----------FGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVH---DRGSPPLSDNCSVIVNLTDSNDNDP---YFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTP----FFLDPRKGLVTNSRTLDHEVQ----SSYTFQVAATDGG--GRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRD----------SPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQ--DSVNKAIVNITVLDVNDEPPI 702 HSP 8 Score: 92.0485 bits (227), Expect = 1.052e-18 Identity = 118/476 (24.79%), Postives = 196/476 (41.18%), Query Frame = 1
Query: 601 ITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGL-NSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTY-FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTT-----LTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDIN 2007
+T A D D G Y+I + F + VL K+ LD E +Y+ + A D G + + + ++D NDN P+F+ ++ V E +++++A D D G N ++ Y + +D FSI++ SG I LD EK+ + V A + P + S+ SV I+V++ D P + + K V EN + +TV DL ++ + I+S + G + + E+ T ++DRE ++ K+ + ++ A I I I+DQNDN P + +I E T PGT + + A DKD G NG + +++ + GV + S S A+F T A D G PK + + I I+D N++ P+FT + I N ++ V + D D N
Sbjct: 1456 VTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVL----------KLIGSLDYEDVPQYTLHISATDLGSPPLTSYQL-FNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSI-----PSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRV----SSTSVRINVMDRNDNPPKFISPVVTLK----VPENSPARLIYTLTV----QDLDYGNNTKVLY--SIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYY-TAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTY------------GVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTN 1888 HSP 9 Score: 91.6633 bits (226), Expect = 1.619e-18 Identity = 156/675 (23.11%), Postives = 275/675 (40.74%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPD--EGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNN--KNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLIS--KGDESYKVKSF----EIRTNQEIDREKIPKISTNILCKE----SVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPS-----ILENT---KPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTG------TVDVEVIDQNDNFPIIIF-----PSQNNATVHVISYLEPR----------------NYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTI 2409
P+F + ISE G +I A+DKD G+N Y +S + R ++ + +K +Y+F +A D GQ D K + + I+I D+N++ PQF+ Y+ + + S + ++ATD D + NGK+ Y+ D + +L F + ++G + Q +IA + +PP+ V+I + N+ D+P +LN SI E +K ++ V + + Q S+IS KG ++ V F + + +D E +++ S++ ++ ++I + D+NDN+P PS + E+T KP VV K+ A D D G NG+VT+S+ + +I T G I ++D E++ + +V+ TD GI PKST+ Q+ + + D+NDN P F + I E+ + V + D D + L+S A P + + + + T + K++F + +D + ++ TG T+DV + D P+ P + V +I EP+ +TV D I Y++E+ S+ F I ++ G I
Sbjct: 1748 PVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIK----------QEYNFFCIAKDQGQ-DPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSL----FVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLR-----GYGIVQIVIGNIQDDPPR----FLNQTPARVSIPENSKVGSYITTVRARASSD------------AQVTYSIISGNKG-RAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYM-----ILDINVIDRNDNSPAFH----PSNMLAQLAEDTGAFKPRFVV-KVTATDVDSGTNGKVTYSIWTGNEAGV--FTIDSTTGEITTAKLLDRETT----ASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSEV-NIREDTRTGAVVTSVVATDTDKESRLTYNLKS---ASTPGIAILRVSA-----TDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIEN-SNYFRIGQRSGVI 2359 HSP 10 Score: 88.9669 bits (219), Expect = 9.303e-18 Identity = 111/422 (26.30%), Postives = 178/422 (42.18%), Query Frame = 1
Query: 796 LMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKE-GLNSVRILRLSATDPDEGIN-GKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN---PTPPVTITLYTSTASVEISVLNVYDE-PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLTYFGT--PSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNP 2031
+ A+D G Q+ + +RII + P+F P Y V E + +L + TD G+ G+I Y + +YF I + SG I + KPLDYE + F V A++ P+ PV + +Y I+V +V DE P+ Y+ + I V + V D R+ + I S KG + K+ IRT + +D E I T+ + + D P + + I+ D NDN P G +LEN + +++I A D+D G N R++F++ L I + G + D E++ +LTI ATD G P S+++ I + + D ++ P F F + N FVG++ D+D D + NP
Sbjct: 2278 VQAMDQGVPPQRA---LVYVRIIITRE--PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENS--------NYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVY-------INVSDVNDEKPVFGQSGYMAQWSEGIP--------VGTIVVNVSAADKDSGANGRV--WFAIQSGDDKGSFAIDRKTGVIRTQRALDHETI---KTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGL--FLIDKFSGWLTTNITFDYENTAVYQYSLTI--KATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNP 2662 HSP 11 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 142/597 (23.79%), Postives = 255/597 (42.71%), Query Frame = 1
Query: 688 DNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGG---QTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVN-PTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNY--SIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP-------TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSL------DREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLE--PRNYKFMTVSANDQDQTSEFNTIEYHLESE-SDVFDIDRQEGTI 2409
D +F + + LN ++ + V + LDRET + + + ID G +T +K+ IN+ D ND P+F Y+ V E + + ++A D D G N +++Y ++ + L +F+I+ SG I LD E+ V+ + +PP++ SV +++ + D N Y N +Y S+ E + S +V + +++ D+ E+ + S+++ + + TN ++ S+ + D S +A + + + D NDN P ++ YF ENT+ G + ++ A D+D + F +E+ + E S+ + G+I + ++D E+ T V A D G + ++IT+ DVND P F+ + FTI E++ S +G + +D + N ++ + + I +N+T +L D EK P V A D G P V + VID NDN P Q N++ ++ E P + F TVS D D + + + L S +F++D G +
Sbjct: 325 DGYFSMK-FDVLNDESI-IAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVG----DVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSY-LHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLS-----DNCSVIVNLTDSND-----NDPYFNQSSYNASLFENSPSG--SPVVQLLAQDPDIG-------ENSLILYSILTPNTPFFLDPRKGLVTNSRTLDHEVQ--SSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYF------ENTRIGQSICQLKAIDRDSPKFAITRFIIEQGN--ADEVFSV-DGSGLITLAKLLDRETQDNYLLT----VKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRD---------KGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAKDK-GTPPLFGYANVTIAVIDINDNSP------QFNSSSILVRLPEDTPIGHTFYTVSVFDAD-SGVLGRVSFSLLSNPGTLFNLDSNTGAL 863 HSP 12 Score: 67.0106 bits (162), Expect = 4.721e-11 Identity = 74/282 (26.24%), Postives = 128/282 (45.39%), Query Frame = 1
Query: 1426 IRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVF--------KIIAQDKDEGENGRVTFSMEKSAFPSL-EYLSIGETDGVIKVKSIIDCES---SLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPII 2229
I T +DREK+ + I V+ P S + + ++D NDN+P S + T VVF K+IA D D G N ++++ ++ + +S +TDG + +++ S + + + ++A+D G L++SIT++D NDN P+F++ TI EN + + ++ DKD+ + +I + + + F I I +N R LD E + V A D + S + V +EV+D NDN P+I
Sbjct: 14 ITTKTVLDREKVSAYNLTI-----VEFSTPPKSYTVLVYVQDLNDNSP--------SFVRGTSAKLVVFENDKDFRQKLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVI--VNNVR-LDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVI 279 HSP 13 Score: 52.7582 bits (125), Expect = 1.192e-6 Identity = 71/276 (25.72%), Postives = 113/276 (40.94%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKI-SRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEF-VKEG--LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVI-----AVNPTPPVTITLYTSTASVEISVLNVYDE----PLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKEN 1326
P+F + + SE + +G + A DKD G N + I S + +F + V+ T + LD ET + + A D G T +++ IR++D NDN P F P + V E LNS R+ ++ATD D G N ++ + G ++D F SG + DYE +++ + A NP IT+ ++NV DE P +DY + + K FV VT T +++
Sbjct: 2405 PVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQ----------RALDHETIKTHHVSVRATDEGSPPMHT-DVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNS-RLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKF-----SGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITI----------IVNVADEDEYDPSFNRMDY----KFDVPGNAKIGDFVGQVTATDRDS 2649
BLAST of Protocadherin-9 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 180.644 bits (457), Expect = 8.302e-46 Identity = 181/654 (27.68%), Postives = 299/654 (45.72%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS-----FEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
I +P ATD D G N V Y++ + + F L+++ T +L V + LDRE + Y + DGG + QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N SG I +++PLD E+ K V+A + + + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E D + +K+ + + T+ +D E + + I+ DS PS +A + + ++D+NDN P F P +++EN K + + A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L ++N + PF + K+N S DRE+ + F V A DS G P S V + VID NDN PI+I+P +N + ++ V A D D T ++Y + S ++ +F ID G I + A +DIG H + + + + GY
Sbjct: 156 INSRFAIPSATDPDTGPNSVHKYELINGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-SPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRL--FALNSTSGLITVQRPLDREETAIHKLSVLASDGSS------SPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEK-----------DVPFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVAS---DSGKPSLNQTALVRVRLEDENDNPP---IFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLG----PNASFFDLDRKTGVLTASRVFDREDQ----DRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNENFILDPFSGVIKSN--------VSFDREQQSSYTFDVRAIDS-GRPPCSSAAKVTINVIDVNDNTPIVIYPP-SNTSFKLVPLSSIPGSVVAEVFAVDSD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGY 759 HSP 2 Score: 88.1965 bits (217), Expect = 3.634e-17 Identity = 137/574 (23.87%), Postives = 243/574 (42.33%), Query Frame = 1
Query: 841 INIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSI--NEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPT--LTYF-----GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VID 2526
I I I + D NDN P F SP+ + E L + R SATDPD G N ++K++ A LD E ++ +++ LD E++ + + + P +STA ++++V +V D +P+ + N+ + EN S ++V + + + D+ + + F +S +K + S I + +DRE+ ++L + S + A + I + D NDN P L Y GT + E T + I DKD NG+V +EK ++ + +++ +++D E + + A+D G + + + ++D NDN P FT + +MENN ++ F+ + D+D + +V + A F L + + L +R DRE +F F V A D+ G P V V V+D+NDN P + N+ V L P+ ++ D D E I + ++++ F +D G I + + + + + G S+ +V + VID
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNS--VHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQK----SSTAILQVTVTDVNDNKPV-----FRENQIEVHIPEN-SPIGTSVVQLQATDADIGPNAEIHYV-FGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSS---PARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGT----KEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNAS--FFDLDRKTGV--LTASRVFDREDQDRFLFTVTARDN-GTPPLQAQAAVIVTVLDENDNNPKF---THNHFQFFVSENL-PKYSTVGVITVTDSD-AGENAAISLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVID 666 HSP 3 Score: 82.4185 bits (202), Expect = 1.930e-15 Identity = 129/505 (25.54%), Postives = 211/505 (41.78%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQ-EPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKII--YKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVP--KFTSSHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E IE+ I E+ IG ++ ATD D G N Y Q P T L LNS + + V +PLDRE T + ++A DG + + + I + D NDN P SPI K+ +N+ +I ++ +D D INGK+I + D F A+ + + + + LDYE + F ++A + P TA V + + + D P + +++E NK + F+ ++ T +++ I +L L K+ + ++ DRE + + + D+ P A+ +I+ D+NDN P T +F + EN + V I D D GEN ++ S+ E + GVIK D E Q ++ T V A D G P S+ +++I + DVNDN P + S+ F ++ +++ S V E+ D D
Sbjct: 249 PVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPAT-------KRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARA---TVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINT-KIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLLETSAL-------LDYEGTKEYNFKIVASDSGKPS----LNQTALVRVRLEDENDNPPIFTQPVI---ELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDL--------DRKTGVLTASRVFDREDQDRFLFTVTAR---DNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFF----VSENLPKYSTVGVITVTDSDAGENAAISLSILNDN----ENFILDPFSGVIKSNVSFDRE----QQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDSD 705 HSP 4 Score: 75.0998 bits (183), Expect = 3.753e-13 Identity = 104/350 (29.71%), Postives = 159/350 (45.43%), Query Frame = 1
Query: 1372 ILSLISKGDESYKVKSF----EI-RTNQEIDREKIPKIST--NILCKESVDSHVPSSS----AKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSM--EKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
+ L+SK +S V+ EI T+ IDREK+ S+ + C ++ V + KI+II+KD NDNAP F +P SI ENT + A D D G N + + +SAF L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + + I EN+ + V +++ D D+ + +I+ V ++ + R+F LN+T R LDRE+ V+A+D +P + TV + V D NDN P II P N TV +S +P N K ++ +D+D
Sbjct: 63 VYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFRLIKIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAF----GLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQ--------VSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARA---TVIINVTDVNDNPPNIDLRYIISPI--NGTV-FLSEKDPINTKIALITVSDKD 391
BLAST of Protocadherin-9 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 180.644 bits (457), Expect = 1.255e-45 Identity = 181/654 (27.68%), Postives = 299/654 (45.72%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS-----FEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
I +P ATD D G N V Y++ + + F L+++ T +L V + LDRE + Y + DGG + QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N SG I +++PLD E+ K V+A + + + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E D + +K+ + + T+ +D E + + I+ DS PS +A + + ++D+NDN P T P +++EN K + + A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L ++N + PF + K+N F DRE+ + F V A DS G P S V + VID NDN PI+I+P +N + ++ V A D D T ++Y + S ++ +F ID G I + A +DIG H + + + + GY
Sbjct: 156 INSRFAIPSATDPDTGPNSVHKYELINGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-SPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRL--FALNSTSGLITVQRPLDREETAIHKLSVLASDGSS------SPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEK-----------DVPFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVAS---DSGKPSLNQTALVRVRLEDENDNPPIFTQ---PVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLG----PNASFFDLDRKTGVLTASRVFDREDQ----DRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNENFILDPFSGVIKSNVSF--------DREQQSSYTFDVRAIDS-GRPPCSSAAKVTINVIDVNDNTPIVIYPP-SNTSFKLVPLSSIPGSVVAEVFAVDSD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGY 759 HSP 2 Score: 88.5817 bits (218), Expect = 3.168e-17 Identity = 136/574 (23.69%), Postives = 242/574 (42.16%), Query Frame = 1
Query: 841 INIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSI--NEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPT--LTYF-----GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VID 2526
I I I + D NDN P F SP+ + E L + R SATDPD G N ++K++ A LD E ++ +++ LD E++ + + + P +STA ++++V +V D +P+ + N+ + EN S ++V + + + D+ + + F +S +K + S I + +DRE+ ++L + S + A + I + D NDN P L Y GT + E T + I DKD NG+V +EK ++ + +++ +++D E + + A+D G + + + ++D NDN P FT + +MENN ++ F+ + D+D + +V + A F L + + L +R DRE +F F V A D+ G P V V V+D+NDN P +N +S P+ ++ D D E I + ++++ F +D G I + + + + + G S+ +V + VID
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNS--VHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQK----SSTAILQVTVTDVNDNKPV-----FRENQIEVHIPEN-SPIGTSVVQLQATDADIGPNAEIHYV-FGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSS---PARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGT----KEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNAS--FFDLDRKTGV--LTASRVFDREDQDRFLFTVTARDN-GTPPLQAQAAVIVTVLDENDNNPKFT----HNHFQFFVSENLPKYSTVGVITVTDSD-AGENAAISLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVID 666 HSP 3 Score: 82.8037 bits (203), Expect = 1.817e-15 Identity = 129/505 (25.54%), Postives = 211/505 (41.78%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQ-EPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKII--YKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVP--KFTSSHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E IE+ I E+ IG ++ ATD D G N Y Q P T L LNS + + V +PLDRE T + ++A DG + + + I + D NDN P SPI K+ +N+ +I ++ +D D INGK+I + D F A+ + + + + LDYE + F ++A + P TA V + + + D P + +++E NK + F+ ++ T +++ I +L L K+ + ++ DRE + + + D+ P A+ +I+ D+NDN P T +F + EN + V I D D GEN ++ S+ E + GVIK D E Q ++ T V A D G P S+ +++I + DVNDN P + S+ F ++ +++ S V E+ D D
Sbjct: 249 PVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPAT-------KRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARA---TVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINT-KIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLLETSAL-------LDYEGTKEYNFKIVASDSGKPS----LNQTALVRVRLEDENDNPPIFTQPVI---ELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDL--------DRKTGVLTASRVFDREDQDRFLFTVTAR---DNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFF----VSENLPKYSTVGVITVTDSDAGENAAISLSILNDN----ENFILDPFSGVIKSNVSFDRE----QQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDSD 705 HSP 4 Score: 75.0998 bits (183), Expect = 3.465e-13 Identity = 104/350 (29.71%), Postives = 160/350 (45.71%), Query Frame = 1
Query: 1372 ILSLISKGDESYKVK----SFEI-RTNQEIDREKIPKIST--NILCKESVDSHVPSSS----AKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSM--EKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
+ L+SK +S V+ + EI T+ IDREK+ S+ + C ++ V + KI+II+KD NDNAP F +P SI ENT + A D D G N + + +SAF L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + + I EN+ + V +++ D D+ + +I+ V ++ + R+F LN+T R LDRE+ V+A+D +P + TV + V D NDN P II P N TV +S +P N K ++ +D+D
Sbjct: 63 VYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFRLIKIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAF----GLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQ--------VSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARA---TVIINVTDVNDNPPNIDLRYIISPI--NGTV-FLSEKDPINTKIALITVSDKD 391
BLAST of Protocadherin-9 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 180.644 bits (457), Expect = 1.275e-45 Identity = 181/654 (27.68%), Postives = 299/654 (45.72%), Query Frame = 1
Query: 589 IGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTV-ELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN---NKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKS-----FEIRTNQEIDREKIPKISTNILCKESVDSHVPS--SSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR----SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESD--VFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGY 2484
I +P ATD D G N V Y++ + + F L+++ T +L V + LDRE + Y + DGG + QK+ + + + + D NDN P F + + E +++L ATD D G N +I Y F + L F++N SG I +++PLD E+ K V+A + + + A+V I+V +V D P I++ Y+ N + E++ N +A++TV+ K+ D+ + C +E D + +K+ + + T+ +D E + + I+ DS PS +A + + ++D+NDN P T P +++EN K + + A D+D G+N + + + P+ + + GV+ + D E VTA D+G P + +T+ D NDN PKFT +H F + EN K S VG I V D D ++ + L ++N + PF + K+N F DRE+ + F V A DS G P S V + VID NDN PI+I+P +N + ++ V A D D T ++Y + S ++ +F ID G I + A +DIG H + + + + GY
Sbjct: 156 INSRFAIPSATDPDTGPNSVHKYELINGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGG-SPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRL--FALNSTSGLITVQRPLDREETAIHKLSVLASDGSS------SPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEK-----------DVPFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVAS---DSGKPSLNQTALVRVRLEDENDNPPIFTQ---PVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLG----PNASFFDLDRKTGVLTASRVFDREDQ----DRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNENFILDPFSGVIKSNVSF--------DREQQSSYTFDVRAIDS-GRPPCSSAAKVTINVIDVNDNTPIVIYPP-SNTSFKLVPLSSIPGSVVAEVFAVDSD-TGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGY 759 HSP 2 Score: 88.5817 bits (218), Expect = 2.972e-17 Identity = 136/574 (23.69%), Postives = 242/574 (42.16%), Query Frame = 1
Query: 841 INIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSI--NEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYD-EPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPT--LTYF-----GTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VID 2526
I I I + D NDN P F SP+ + E L + R SATDPD G N ++K++ A LD E ++ +++ LD E++ + + + P +STA ++++V +V D +P+ + N+ + EN S ++V + + + D+ + + F +S +K + S I + +DRE+ ++L + S + A + I + D NDN P L Y GT + E T + I DKD NG+V +EK ++ + +++ +++D E + + A+D G + + + ++D NDN P FT + +MENN ++ F+ + D+D + +V + A F L + + L +R DRE +F F V A D+ G P V V V+D+NDN P +N +S P+ ++ D D E I + ++++ F +D G I + + + + + G S+ +V + VID
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNS--VHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQK----SSTAILQVTVTDVNDNKPV-----FRENQIEVHIPEN-SPIGTSVVQLQATDADIGPNAEIHYV-FGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSS---PARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGT----KEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNAS--FFDLDRKTGV--LTASRVFDREDQDRFLFTVTARDN-GTPPLQAQAAVIVTVLDENDNNPKFT----HNHFQFFVSENLPKYSTVGVITVTDSD-AGENAAISLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVID 666 HSP 3 Score: 82.8037 bits (203), Expect = 1.791e-15 Identity = 129/505 (25.54%), Postives = 211/505 (41.78%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQ-EPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFS-----SPIYKEFV---KEGLNSVRILRLSATDPDEGINGKII--YKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIK--DQNDNAPTLT-----YFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVP--KFTSSHMIFTIME-NNMKNSFVGEIEVEDKD 1989
P+F E IE+ I E+ IG ++ ATD D G N Y Q P T L LNS + + V +PLDRE T + ++A DG + + + I + D NDN P SPI K+ +N+ +I ++ +D D INGK+I + D F A+ + + + + LDYE + F ++A + P TA V + + + D P + +++E NK + F+ ++ T +++ I +L L K+ + ++ DRE + + + D+ P A+ +I+ D+NDN P T +F + EN + V I D D GEN ++ S+ E + GVIK D E Q ++ T V A D G P S+ +++I + DVNDN P + S+ F ++ +++ S V E+ D D
Sbjct: 249 PVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPAT-------KRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARA---TVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINT-KIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLLETSAL-------LDYEGTKEYNFKIVASDSGKPS----LNQTALVRVRLEDENDNPPIFTQPVI---ELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDL--------DRKTGVLTASRVFDREDQDRFLFTVTAR---DNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFF----VSENLPKYSTVGVITVTDSDAGENAAISLSILNDN----ENFILDPFSGVIKSNVSFDRE----QQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDSD 705 HSP 4 Score: 75.485 bits (184), Expect = 2.760e-13 Identity = 104/350 (29.71%), Postives = 160/350 (45.71%), Query Frame = 1
Query: 1372 ILSLISKGDESYKVK----SFEI-RTNQEIDREKIPKIST--NILCKESVDSHVPSSS----AKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSM--EKSAFPSLEYLSIGET-DGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--HDDINLVLRSKNPAMLPFVILKKANRIFHLNTT-------RSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFP-----IIIFPSQNNATVHVISYLEPRNYKFMTVSANDQD 2325
+ L+SK +S V+ + EI T+ IDREK+ S+ + C ++ V + KI+II+KD NDNAP F +P SI ENT + A D D G N + + +SAF L I ET +G + I+ Q T + + D G KS+ + +T+ DVNDN P F + + I EN+ + V +++ D D+ + +I+ V ++ + R+F LN+T R LDRE+ V+A+D +P + TV + V D NDN P II P N TV +S +P N K ++ +D+D
Sbjct: 63 VYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFRLIKIKIIVKDTNDNAP---MFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAF----GLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQ--------VSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARA---TVIINVTDVNDNPPNIDLRYIISPI--NGTV-FLSEKDPINTKIALITVSDKD 391
BLAST of Protocadherin-9 vs. Ensembl Medaka
Match: PCDH8 (protocadherin 8 [Source:NCBI gene;Acc:101158635]) HSP 1 Score: 177.178 bits (448), Expect = 9.370e-45 Identity = 160/582 (27.49%), Postives = 281/582 (48.28%), Query Frame = 1
Query: 538 PIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVT-VELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLN-SVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAV----NPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIV---EENKSNFFVAIVTVTSKENDLFRSIQCRL---EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP----SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKS---AFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHM----IFTIMENNMKNSFV-GEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVID 2205
P F + +EISE+ +G I L A D+D G N +++Y+IS ++HF ++VL+ + V EL + K LDRET Y+ +L+A+DGG ++G+ I I++ D NDN P F + ++E +L L+A DPDEG+NG+++Y F + I F ++ +G + L+ P+D+E +T ++F V A NP+P + + + V +V D EI++ + + I E FVA+V+ + +++ + C L +HF + ++Y+ SF I + +DREKIP+ + ++ E + S + + I + D+NDNAP F P +++EN PG + ++A+D D G NG+VT+ + + P ++S+ G + + E L + VTA+D G P S + + I D NDN P T + ++ + +V +E D D V+ +++ L + P++ F + K I+ LN + L + D + V +D+ G P + T T+ +I+
Sbjct: 128 PEFPRKESSLEISENTAVGTRIPLDFAVDEDVGVNYIQSYQIS------VNSHFSIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNP-SRSGTTRINIKVKDYNDNSPVFDRKSFSVDLREDAPVGSLLLDLNAEDPDEGLNGEVVYGFG--HQVPPEIRQLFRVDRKTGRLTLESPVDFESKTTYEFDVQATDLGPNPSPAI--------CKIVVQVQDVNDNAPEISITPMTSITAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHF--------RLQQAYE-DSFMIVSTSPLDREKIPEYNLTVVA-EDLGSPPFRTITQYTIRLTDENDNAPV---FSKPVYEVAVVENNPPGAYITTVVARDMDMGSNGKVTYKLADTYVMGSPISAFVSLDPASGSLYALRSFNYE----LMKHLELRVTASDGGSPPLSGSASVHVRIVDQNDNSPVITQPPLNNGSAEVLLPRDSPTGYVITRVEARDADEGVNSELSYGLATGEPSV--FSVNKVTGEIY-LN--QVLSHDVDETLSVTVTVSDN-GRPALTSTATLHFLIIE 669 HSP 2 Score: 115.931 bits (289), Expect = 9.914e-26 Identity = 117/430 (27.21%), Postives = 189/430 (43.95%), Query Frame = 1
Query: 1360 HFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSA--KIEIIIKDQNDNAPTLTYFGTPSILENTKP-GTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYL-SIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHM------IFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLE--PRNYKFMTVSANDQDQTSEFNTIEYHLESE-------SDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV-VIDASTAKSNSPRIENFNINNG 2583
HF + ++S+ D VK E+ +E+DRE + ++ ++D PS S +I I +KD NDN+P L P G+++ + A+D DEG NG V + P + L + G + ++S +D ES TT V ATD G P +I + +QDVNDN P+ + + M I I E + SFV + D+D + ++ L + F + + F + +T LDREK P++N V+A D LG+P + + D+NDN P+ P V+ ++ +E P TV A D D S + Y L S +D G+++ R + +++T + G + S V+V ++D + NSP I +NNG
Sbjct: 174 HFS--IDVLSRAD---GVKYAELVLMKELDRETQASYALELV---AMDGGNPSRSGTTRINIKVKDYNDNSPVFDRKSFSVDLREDAPVGSLLLDLNAEDPDEGLNGEVVYGFGHQVPPEIRQLFRVDRKTGRLTLESPVDFESK----TTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSITAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHD----HFRLQQAYEDSFMIVSTSPLDREKIPEYNLTVVAED-LGSPPFRTITQYTIRLTDENDNAPVFSKP------VYEVAVVENNPPGAYITTVVARDMDMGSN-GKVTYKLADTYVMGSPISAFVSLDPASGSLYALRSFNYELMKHLELRVTASDGGSPPLSGSASVHVRIVDQN---DNSPVITQPPLNNG 576 HSP 3 Score: 92.8189 bits (229), Expect = 1.206e-18 Identity = 155/660 (23.48%), Postives = 280/660 (42.42%), Query Frame = 1
Query: 676 PRTFDNHFRLNVLNTLNSVTVELK-------VFKPLDRETTNKYSFD-LMAIDGGQ-TDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLS---ATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDS-------GEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKEND--LFRSIQCRLEHF--QEILSLISKGDESYKVK-----SFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSS-AKIEIIIKDQNDNAPTLTY-------FGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAML-----PFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLE-PRNYKFMTVSANDQDQTSEFNTIEYHLES-ESDVFDIDRQEGTIFTRREMAKSDIGEHV-IKITVFNPGYTSMKSSVQVNVVI 2523
P + N+FR ++ NS + L+ + + +DRE K++ L+A D + ++ I+I + + D NDN P+F P + ++ N+ R+ A D D G+N Y+ + +FSI+ S E+ L K LD E Q + ++A++ P + T + I V + D N + K++S+ + ++ + +++ D L + H EI L ++ ++ FE +T E D + + N PS + KI + ++D NDNAP ++ G I E + V + D+D G NG+V ++ L+ E +I S +D E + + V A D G P T Q +I + D NDN P F+ ++ENN +++ + D D+ + + + + ++ FV L A+ L RS + E +V A+D G+P S + +V V ++DQNDN P+I P NN + V+ + P Y V A D D+ + + Y L + E VF +++ G I+ + ++ D+ E + + +TV + G ++ S+ ++ +I
Sbjct: 52 PSSSRNNFR--IMKQFNSSFIRLRESDGQLSIGERIDRERICKHTLQCLIAFDVVSFSKEQFKLIHIEVEVKDINDNSPEF--PRKESSLEISENTAVGTRIPLDFAVDEDVGVNYIQSYQIS--------VNSHFSIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSR----SGTTRINIKVKDYND-----NSPVFDRKSFSVDLREDAPVGSLLLDLNAEDPDEGLNGEVVYGFGHQVPPEIRQLFRVDRKTGRLTLESPVDFESKTTYEFDVQAT-DLGPN-----------PSPAICKIVVQVQDVNDNAPEISITPMTSITAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAY--EDSFMIVSTSPLDRE----KIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNPPGAYITTVVARDMDMGSNGKVTYKLADTYVMGSPISAFVSLDPASG--SLYALRSFNYELMKHLELRVTASDG-GSPPLSGSASVHVRIVDQNDNSPVITQPPLNNGSAEVLLPRDSPTGYVITRVEARDADEGVN-SELSYGLATGEPSVFSVNKVTGEIYLNQVLSH-DVDETLSVTVTVSDNGRPALTSTATLHFLI 667 HSP 4 Score: 52.7582 bits (125), Expect = 2.705e-6 Identity = 53/227 (23.35%), Postives = 94/227 (41.41%), Query Frame = 1
Query: 1600 LENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIID----CESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDV--------------HDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPI 2226
E PGTV+ + + R F + K S ++ + E+DG + + ID C+ +L +V + K + + I + ++D+NDN P+F I EN + + D+DV H I+++ R+ V++K+ LDRE + +++A D GNP+ S T ++++V D NDN P+
Sbjct: 32 FEEDAPGTVIGNLAKDISLSPSSSRNNFRIMKQFNSS--FIRLRESDGQLSIGERIDRERICKHTLQCLIAFDVVSFS-----KEQFKLIHIEVEVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGVNYIQSYQISVNSHFSIDVLSRADGVKYAELVLMKE------------LDRETQASYALELVAMDG-GNPSRSGTTRINIKVKDYNDNSPV 238
BLAST of Protocadherin-9 vs. Ensembl Medaka
Match: pcdh2ab9 (protocadherin alpha-C2 [Source:NCBI gene;Acc:101161365]) HSP 1 Score: 176.022 bits (445), Expect = 2.058e-44 Identity = 183/669 (27.35%), Postives = 311/669 (46.49%), Query Frame = 1
Query: 268 DLKKLIPQTKMTYHLLKSSKAHSYFTIKNDN--LFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTL-NSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTP-PVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFE----IRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKI--EIIIKDQNDNAPTLTYFG-TPSILENTKPGTVVFKIIAQDKDEGENGRVTFSM---EKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFT-----SSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINL--VLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQ 2208
DL+K P ++T L+S YFTI ++ L + +D +++C+ G C + + + + N E++ + P F ++E+ ES G + A D D +N ++ Y++S ++HF L+ + L N+ +E + +P DRE T Y L A+DGG T Q+TG+ I +RI+D NDN+P F S +YK + + +++L+A+DPDEG NG++ Y F T + FS++ ++GEI +K +DYE+ ++ + A++ P PV + V + VL+V D EI + L++ + E+ +++ VA+++V + D ++ Q L+ + +++KSF I T +DRE I + ++ +VD+ P+ S+++ ++ + D NDN P T I EN PG + + A D D GEN R+T+++ P Y+SI G D E L +F + A D+G+ P S L + + I D ND+VP+ S TIM+N + V ++ D D + L L N + F + + I TTR + + F V D G P S T T+ V V++Q
Sbjct: 58 DLRKP-PNRRIT---LRSDSGSKYFTINHETGKLVVSDRIDRETLCEFSGTCSRNLEVVLENPHEV---HNVVVEILDVNDNA---------PQFPRDEYQLEVLESALTGSRFQIEKAQDTDDDSNSIKQYRLSP------NDHFTLDSIKPLSNNNHLEFILKRPFDREQTPSYQLILTAVDGG-TPQRTGTARINVRILDANDNVPAFDSSVYKVKLYENSPKGALVIKLNASDPDEGSNGEVFYSFSS--YTPERVRQVFSMDTNTGEIRVKNNIDYEETNSYEMYIQAMDKGPAPV-----AAHCKVVVEVLDVNDNIPEIVLTSLSSP---VREDARADTVVALISVNDR--DSGQNKQVTLDIMPHL---------PFRIKSFRNHYTIVTAAFLDRETISSYNVTVI---AVDAGTPALSSQMTFKVEVADVNDNPPRFEQTSYTVYITENNAPGASLCIVKATDADAGENARITYTVLNDNNHGIPVASYVSIKPNTGEAYALRSFDFE-KLQEF---HFQIKAQDNGVPPLSRVLTVYVYIMDHNDHVPRIVYPPANGSRTTETIMKNAEAGALVSKVMAWDGDAGQNAWLFFALEQTNTDLDLFKVHEYTGEI---RTTRRVKEDNATTFALTVKVHDH-GLPRLSSTATIHVNVMEQ 671 HSP 2 Score: 116.701 bits (291), Expect = 6.289e-26 Identity = 153/628 (24.36%), Postives = 260/628 (41.40%), Query Frame = 1
Query: 718 TLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYK-EFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSI-------NEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKEND------LFRSIQCRL-EHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAP--TLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEY-LSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINL---VLRSKN---PAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNA-TVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLE---SESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNV 2517
T+N T +L V +DRET ++S + N+ + I+D NDN PQF Y+ E ++ L R A D D+ N Y+ P D+F++ N + E LK+P D E+ ++ + AV+ P T TA + + +L+ D NV ++ Y + S ++ + + + D +F S E +++ S+ + EIR ID E+ I + + V ++ K+ + + D NDN P LT +P + E+ + TVV I D+D G+N +VT + P L + + I + +D E+ ++ + V A D G S+ + + + DVNDN P+F + I ENN + + ++ D D ++ + VL N P I + L RS D EK +F+FQ+ A D+ G P S TV V ++D ND+ P I++P N + T I V A D D + + + LE ++ D+F + G I T R + + + + + V + G + S+ ++V
Sbjct: 79 TINHETGKLVVSDRIDRETLCEFSGTCSRNLEVVLENPHEVHNVVVEILDVNDNAPQFPRDEYQLEVLESALTGSRFQIEKAQDTDDDSNSIKQYRLSPN--------DHFTLDSIKPLSNNNHLEFILKRPFDREQTPSYQLILTAVDGGTP----QRTGTARINVRILDAND-----NVPAFDSSVYKVKLYENSPKGALVIKLNASDPDEGSNGEVFYSFSSYTPERVRQVFSM--------DTNTGEIRVKNNIDYEETNSYEMYIQAMDKGPAPV-AAHCKVVVEVLDVNDNIPEIVLTSLSSP-VREDARADTVVALISVNDRDSGQNKQVTLDI----MPHLPFRIKSFRNHYTIVTAAFLDRET----ISSYNVTVIAVDAGTPALSSQMTFKVEVADVNDNPPRFEQTSYTVYITENNAPGASLCIVKATDADAGENARITYTVLNDNNHGIPVASYVSIKPNTGEAYAL---RSFDFEKLQEFHFQIKAQDN-GVPPLSRVLTVYVYIMDHNDHVPRIVYPPANGSRTTETIMKNAEAGALVSKVMAWDGD-AGQNAWLFFALEQTNTDLDLFKVHEYTGEIRTTRRVKEDNATTFALTVKVHDHGLPRLSSTATIHV 666 HSP 3 Score: 57.3806 bits (137), Expect = 1.050e-7 Identity = 91/397 (22.92%), Postives = 154/397 (38.79%), Query Frame = 1
Query: 1441 EIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTP------SILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKD--VHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRS-------LDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIF-----PSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNT---IEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIE 2562
IDRE + + S V P + + I D NDNAP P +LE+ G+ AQD D+ N + + + +L+ SI ++ I+ Q + +++TA D G ++ +I++ I D NDNVP F SS + EN+ K + V ++ D D + ++ S P ++ ++F ++T +D E+ + + A D P + V VEV+D NDN P I+ P + +A + L +S ND+D I HL F R TI T + + I + + + + G ++ S Q+ ++ + N PR E
Sbjct: 92 RIDRETLCEFSGTCSRNLEVVLENPHEVHNVVVEILDVNDNAPQF-----PRDEYQLEVLESALTGSRFQIEKAQDTDDDSNSIKQYRLSPNDHFTLD--SIKPLSNNNHLEFILKRPFDREQTPSYQLILTAVDGGTPQRTGTARINVRILDANDNVPAFDSSVYKVKLYENSPKGALVIKLNASDPDEGSNGEVFYSFSSYTP--------ERVRQVFSMDTNTGEIRVKNNIDYEETNSYEMYIQAMDKGPAPVAAHCKVV-VEVLDVNDNIPEIVLTSLSSPVREDARADTVVAL---------ISVNDRDSGQNKQVTLDIMPHLPFRIKSF---RNHYTIVTAAFLDRETISSYNVTVIAVDAGTPALSS--QMTFKVEVADVNDNPPRFE 458
BLAST of Protocadherin-9 vs. Planmine SMEST
Match: SMESG000041975.1 (SMESG000041975.1) HSP 1 Score: 2030.37 bits (5259), Expect = 0.000e+0 Identity = 1044/1048 (99.62%), Postives = 1046/1048 (99.81%), Query Frame = 1
Query: 157 MHVSYVWYLWLILFIKKNTCMEVINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFSTSEXXXXXXXXXXXXXXXXXXXXXXXXLRHCHREPVCLRGLIDKCSHNNLSQNENQVYSPTIKLNAKTDGDYYKDPMQNPSIAREQSNNWNVVNQSGIYNVTVSPNQYFKGGQYMKLVNPSHYYAQPMAYQTIDDNLLNKFPDNNFSKSVFNINNRLNCKSEMNLNTENLFNDPNQESIQINGPSKSQWITSLTPMQTRSKSVVNRIISIEQPIENNFAVVYPPEQSTFV 3300
MHVSYVWYLWLILFIKKNTCME+INISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVIRKDIKISIRDKNDNYPIFNERNIEIEISESVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDID+QEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFN NN GLMAHNSFSTSEIIIAILIVIVFFVVFVIIIIVCVVLRHCHREPVCLRGLIDKCSHNNLSQNENQVYSPTIKLNAKTDGDYYKDPMQNPSIAREQSNNWNVVNQSGIYNVTVSPNQYFKGGQYMKLVNPSHYYAQPMAYQTIDDNLLNKFPDNNFSKSVFNINNRLNCKSEMNLNTENLFNDPNQESIQINGPSKSQWITSLTPMQTRSKSVVNRIISIEQPIENNFAVVYPPEQSTFV
Sbjct: 1 MHVSYVWYLWLILFIKKNTCMEIINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVIRKDIKISIRDKNDNYPIFNERNIEIEISESVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDQQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNTNNSGLMAHNSFSTSEIIIAILIVIVFFVVFVIIIIVCVVLRHCHREPVCLRGLIDKCSHNNLSQNENQVYSPTIKLNAKTDGDYYKDPMQNPSIAREQSNNWNVVNQSGIYNVTVSPNQYFKGGQYMKLVNPSHYYAQPMAYQTIDDNLLNKFPDNNFSKSVFNINNRLNCKSEMNLNTENLFNDPNQESIQINGPSKSQWITSLTPMQTRSKSVVNRIISIEQPIENNFAVVYPPEQSTFV 1048
BLAST of Protocadherin-9 vs. Planmine SMEST
Match: SMESG000041975.1 (SMESG000041975.1) HSP 1 Score: 1981.84 bits (5133), Expect = 0.000e+0 Identity = 1024/1028 (99.61%), Postives = 1026/1028 (99.81%), Query Frame = 1
Query: 217 MEVINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNINNGGLMAHNSFSTSEXXXXXXXXXXXXXXXXXXXXXXXXLRHCHREPVCLRGLIDKCSHNNLSQNENQVYSPTIKLNAKTDGDYYKDPMQNPSIAREQSNNWNVVNQSGIYNVTVSPNQYFKGGQYMKLVNPSHYYAQPMAYQTIDDNLLNKFPDNNFSKSVFNINNRLNCKSEMNLNTENLFNDPNQESIQINGPSKSQWITSLTPMQTRSKSVVNRIISIEQPIENNFAVVYPPEQSTFV 3300
ME+INISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVIRKDIKISIRDKNDNYPIFNERNIEIEISESVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDID+QEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFN NN GLMAHNSFSTSEIIIAILIVIVFFVVFVIIIIVCVVLRHCHREPVCLRGLIDKCSHNNLSQNENQVYSPTIKLNAKTDGDYYKDPMQNPSIAREQSNNWNVVNQSGIYNVTVSPNQYFKGGQYMKLVNPSHYYAQPMAYQTIDDNLLNKFPDNNFSKSVFNINNRLNCKSEMNLNTENLFNDPNQESIQINGPSKSQWITSLTPMQTRSKSVVNRIISIEQPIENNFAVVYPPEQSTFV
Sbjct: 1 MEIINISDDTALNIKLYDLKKLIPQTKMTYHLLKSSKAHSYFTIKNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVIRKDIKISIRDKNDNYPIFNERNIEIEISESVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNNKNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLRSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFNTIEYHLESESDVFDIDQQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDASTAKSNSPRIENFNTNNSGLMAHNSFSTSEIIIAILIVIVFFVVFVIIIIVCVVLRHCHREPVCLRGLIDKCSHNNLSQNENQVYSPTIKLNAKTDGDYYKDPMQNPSIAREQSNNWNVVNQSGIYNVTVSPNQYFKGGQYMKLVNPSHYYAQPMAYQTIDDNLLNKFPDNNFSKSVFNINNRLNCKSEMNLNTENLFNDPNQESIQINGPSKSQWITSLTPMQTRSKSVVNRIISIEQPIENNFAVVYPPEQSTFV 1028
BLAST of Protocadherin-9 vs. Planmine SMEST
Match: SMESG000051236.1 (SMESG000051236.1) HSP 1 Score: 358.607 bits (919), Expect = 8.900e-106 Identity = 261/751 (34.75%), Postives = 406/751 (54.06%), Query Frame = 1
Query: 304 YHLLKSSKAHSYFTI-KNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN--NKNYSIVE-ENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL-RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFN-TIEYHL-ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDAS 2532
++LL ++KA+ F + N L++ +D + +C NV CC+K K+ CD S++IA + + E + +I I D NDN P F I I ES +G +LP+ATD D + YK+ +E F F L S+ ++L + LDRE KY F L+AID G KTG + I I ++D NDN P S Y +E S++ +L++ A D DE N K+++K YF I E+SG IYLK+ LDYE+ +F V N V T+TA+V I V+N+ DE EI +DY+N NKN I E E++ FVA+ TVT K+ L + CRL + + + + ++ D S + IRT +DRE + C++ D + + A I++++KD+NDNAP + S+ EN GT+V I A+D DEG+NG +T+S+ +S+ + +YL I G +K + ID E + +++T +D G P+ + ++++D NDN P+F + + F + EN +GEI V DKD + + + L N PFV+ ++ N+ ++LNTTRSLD EK+ ++F+++A+D G +++ T TV V + D+ND+ P IFP+ +N T + ISY E +TVS D D N +HL +F ID+ +G I T R M++SD+G+HVI + + G +SS+ + +VID S
Sbjct: 50 FNLLSNTKANRLFHLHSNGKLYSAQTIDREELCINVESCCHK-KDPCDISLSIAVKSDSIEEPRTFECRIQIEDINDNAPRFRTDKFTINIKESEPVGSLFSLPIATDDDSEQYSIRDYKL--EENSIFPPIFSLEQNRPTGSLNLQL--IQKLDREKRAKYEFVLLAIDRGNP-PKTGRLVININVLDVNDNPPHLSQTNYNIQYEESKFSMQPLLKIGAKDEDENDNAKMVFKIVNEQPVKVDANKYFRIEENSGNIYLKEKLDYERDEQHRFYVEVSNNAGHVD----TATATVLIQVINLNDETPEIAIDYVNENNKNAFIKENEDQKTKFVALATVTDKDKGLGGQVHCRLSNNENVFEIHNR-DSSIPSNKYSIRTRVTLDRETKGYYELQMECEDKGDPPL-RAKALIKVVVKDENDNAPVIKLENNVSVYENKPIGTLVTHITAKDIDEGKNGELTYSISESSDLTKKYLEINSHTGDLKTRMKIDREQDSETLQSFPVILTVSDKGQPPQISRKAFDVSVKDENDNAPEFENYSIQFQVTENQQALYTLGEIRVHDKDDNSQLRVSLVHLPNEMSSPFVLFERDNK-YYLNTTRSLDWEKEKNYSFKILASDGTGYKSHTATATVTVIIEDENDHAPSFIFPNYSNFTKY-ISYHESAEIAILTVSVGDLDSKDSMNGKCSFHLVNDHKGLFKIDQNKGKITTSRTMSESDMGKHVITVIARDHGNPPKESSILITIVIDNS 786
BLAST of Protocadherin-9 vs. Planmine SMEST
Match: SMESG000051236.1 (SMESG000051236.1) HSP 1 Score: 358.221 bits (918), Expect = 1.384e-105 Identity = 261/751 (34.75%), Postives = 406/751 (54.06%), Query Frame = 1
Query: 304 YHLLKSSKAHSYFTI-KNDNLFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQESEVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEGLNSVR-ILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLN--NKNYSIVE-ENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAKIEIIIKDQNDNAPTLTYFGTPSILENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVL-RSKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFN-TIEYHL-ESESDVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVIDAS 2532
++LL ++KA+ F + N L++ +D + +C NV CC+K K+ CD S++IA + + E + +I I D NDN P F I I ES +G +LP+ATD D + YK+ +E F F L S+ ++L + LDRE KY F L+AID G KTG + I I ++D NDN P S Y +E S++ +L++ A D DE N K+++K YF I E+SG IYLK+ LDYE+ +F V N V T+TA+V I V+N+ DE EI +DY+N NKN I E E++ FVA+ TVT K+ L + CRL + + + + ++ D S + IRT +DRE + C++ D + + A I++++KD+NDNAP + S+ EN GT+V I A+D DEG+NG +T+S+ +S+ + +YL I G +K + ID E + +++T +D G P+ + ++++D NDN P+F + + F + EN +GEI V DKD + + + L N PFV+ ++ N+ ++LNTTRSLD EK+ ++F+++A+D G +++ T TV V + D+ND+ P IFP+ +N T + ISY E +TVS D D N +HL +F ID+ +G I T R M++SD+G+HVI + + G +SS+ + +VID S
Sbjct: 56 FNLLSNTKANRLFHLHSNGKLYSAQTIDREELCINVESCCHK-KDPCDISLSIAVKSDSIEEPRTFECRIQIEDINDNAPRFRTDKFTINIKESEPVGSLFSLPIATDDDSEQYSIRDYKL--EENSIFPPIFSLEQNRPTGSLNLQL--IQKLDREKRAKYEFVLLAIDRGNP-PKTGRLVININVLDVNDNPPHLSQTNYNIQYEESKFSMQPLLKIGAKDEDENDNAKMVFKIVNEQPVKVDANKYFRIEENSGNIYLKEKLDYERDEQHRFYVEVSNNAGHVD----TATATVLIQVINLNDETPEIAIDYVNENNKNAFIKENEDQKTKFVALATVTDKDKGLGGQVHCRLSNNENVFEIHNR-DSSIPSNKYSIRTRVTLDRETKGYYELQMECEDKGDPPL-RAKALIKVVVKDENDNAPVIKLENNVSVYENKPIGTLVTHITAKDIDEGKNGELTYSISESSDLTKKYLEINSHTGDLKTRMKIDREQDSETLQSFPVILTVSDKGQPPQISRKAFDVSVKDENDNAPEFENYSIQFQVTENQQALYTLGEIRVHDKDDNSQLRVSLVHLPNEMSSPFVLFERDNK-YYLNTTRSLDWEKEKNYSFKILASDGTGYKSHTATATVTVIIEDENDHAPSFIFPNYSNFTKY-ISYHESAEIAILTVSVGDLDSKDSMNGKCSFHLVNDHKGLFKIDQNKGKITTSRTMSESDMGKHVITVIARDHGNPPKESSILITIVIDNS 792
BLAST of Protocadherin-9 vs. Planmine SMEST
Match: SMESG000059376.1 (SMESG000059376.1) HSP 1 Score: 355.14 bits (910), Expect = 5.088e-105 Identity = 271/768 (35.29%), Postives = 392/768 (51.04%), Query Frame = 1
Query: 286 PQTKMTYHLLKSSKAHSYFTIKNDN--LFTNTLVDMDSMCQNVGECCNKAKEICDFSIAIACRENQES---------EVXXXXXXXXXXXXXXXYPIFNERNXXXXXXXXVKIGHTITLPVATDKDFGNNQVETYKISRQEPRTFDNHFRLNVLNTLNSVTVELKVFKPLDRETTNKYSFDLMAIDGGQTDQKTGSINIAIRIIDENDNMPQFSSPIYKEFVKEG-LNSVRILRLSATDPDEGINGKIIYKFDPRFKTGALILDYFSINEDSGEIYLKKPLDYEKQTFFKFPVIAVNPTPPVTITLYTSTASVEISVLNVYDEPLEINVDYLNN-KNYSIVEENKSNFFVAIVTVTSKENDLFRSIQCRLEHFQEILSLISKGDESYKVKSFEIRTNQEIDREKIPKISTNILCKESVDSHVPSSSAK--IEIIIKDQNDNAPTLTYFGTPSIL---ENTKPGTVVFKIIAQDKDEGENGRVTFSMEKSAFPSLEYLSIGETDGVIKVKSIIDCESSLAQFTTLTIVVTATDHGIKPKSTDLQISITIQDVNDNVPKFTSSHMIFTIMENNMKNSFVGEIEVEDKDVHDDINLVLR--SKNPAMLPFVILKKANRIFHLNTTRSLDREKDPKFNFQVIATDSLGNPTNSVTGTVDVEVIDQNDNFPIIIFPSQNNATVHVISYLEPRNYKFMTVSANDQDQTSEFN-TIEYHLESES-DVFDIDRQEGTIFTRREMAKSDIGEHVIKITVFNPGYTSMKSSVQVNVVI 2523
P+ K+ Y LL Y + ++N LF +D DS+C + CC K+ IC S+++A Q S + + + N YPIFN + ISES + T LP+A DKD V++YK + + F L ++V L++ LDRE T++YS + A+DGG TG + + I ++D NDN P F + Y VKE + S I ++ ATD D G N +I YK D F ++E SG +Y+ PLDYEK +K + A N P V T+TA++ ++V+N+ DE I VDY NN ++ SI E + FV IVTV K+ + +QC+L++ E+ L YK I T Q++DRE K S +I+CK D PS SA I ++I D+NDN P + +PSI EN PGT+V KI A DKD+G NG++T+S+ + YL+I G+I+ ID E++ T L + VT +D G +S+ I I I D NDN P+F S F++ EN +G+IEV D D + L + N PF I + NR F L TT SLDRE+ + +IATD G +++ + TV+V V+D NDN PI IFP N T+ + Y + Y +T SAND+D N + + + S S ++F+ID G I R+M SDIG+H I I V + G + S Q+ + I
Sbjct: 49 PEGKVLYRLLSGGSFIEYLHLDSNNGKLFAKRKIDRDSLCSEIELCC-KSDIICSVSVSVAMTAAQPSSKLSDPIIGKFLIVIEDRNDHKPNFEYPIFN-----LSISESCPVSTTFQLPLAIDKDSDKYSVKSYKFISKSDLSI---FSLETQFIDRKMSVYLRLKNRLDREDTDQYSLTIAAVDGGDP-ALTGVLVVHILVLDVNDNPPVFENTRYNVRVKESQMISDSIAQVRATDRDIGENAEIFYKLDSGM---------FRVDELSGSVYMISPLDYEKDQEYKLIITARNRIPGVN----TATATLTVNVININDEKPVIFVDYFNNWQHASISEYETAPAFVCIVTVKDKDIGIAGKVQCQLDNHHELFDLRQNSPGQYK-----IHTRQQLDRETNSKYSLSIVCK---DQGTPSLSADTIIPVVILDKNDNKPEI---NSPSIFHVSENKPPGTIVTKIDATDKDDGLNGKLTYSITDAQNLVSSYLTIDSQTGIIRTLQKIDREATNPPLTKLDLSVTVSDSGTPKQSSIKSIQILIDDENDNAPQFGQSTFRFSVTENEAPIYRLGQIEVSDPDETGSVRLGISFIKSNNRKSPFSITSEKNR-FWLMTTESLDREELDFYELVIIATDGAGYKSHTASATVNVTVLDINDNPPIFIFPRSGNETIPKVPYRQQPGYLVLTASANDKDNLPRGNGKLYFSINSNSNNLFNIDPHNGEIRIHRQMGISDIGDHFIIIKVEDDGTPVLSSERQIQIKI 781 The following BLAST results are available for this feature:
BLAST of Protocadherin-9 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin-9 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin-9 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin-9 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin-9 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin-9 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30014036 ID=SMED30014036|Name=Protocadherin-9|organism=Schmidtea mediterranea sexual|type=transcript|length=3433bpback to top protein sequence of SMED30014036-orf-1 >SMED30014036-orf-1 ID=SMED30014036-orf-1|Name=SMED30014036-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1049bp MHVSYVWYLWLILFIKKNTCMEVINISDDTALNIKLYDLKKLIPQTKMTYback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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