ATP binding cassette subfamily A member 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30014020 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 35Note: Hover over icons to view figure legend
Homology
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]) HSP 1 Score: 274.248 bits (700), Expect = 5.060e-77 Identity = 178/561 (31.73%), Postives = 295/561 (52.58%), Query Frame = 1 Query: 739 RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDWI-NEAVNNSKLINELKSCKSWYFYFDNNLCE---TVNAVLNF-----QTIQS----------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM--KSVFAVLVINDTFRYLTPSNATF---LSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 +N E+ + I+ + + GKI ++P++P TR++M N TF+ L W L + W E L+ L + +++ L T ++ F + +QS N+ + + + + C LNK PI + + N + + + +A +V F +TP + + Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I ++T E G MQ MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL NS+ W WF+S+++ L+ ++ ++L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + L + VAF + +E+ G + NLF+ + + F + + M++ D+ LY + WY+E+VFPGQYG+ + WYF T++YW +E+ +H +N ++ SE E E T L++G+SI+NLVK Y Sbjct: 360 KNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLVRMLLDSRDNDHFWEQQLDGLDWTAQDIVAFLAKHPEDVQSSNGSVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVWLINKSMELLDERKFWAGIV----FTGITPGSIELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEK-KTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKRI-----SEICMEEEPTHLKLGVSIQNLVKVY 908
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA7 (ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]) HSP 1 Score: 234.572 bits (597), Expect = 8.943e-64 Identity = 162/540 (30.00%), Postives = 269/540 (49.81%), Query Frame = 1 Query: 796 VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRL---HFRDWINEAVNNS---KLINELKSCKSWYFYFDNNLCETVNAVLNFQTI----QSILNKISLMFSLLEKTLNCTELNKF-MPINESITVENFIKQPMKSVFAVLVI-------NDTFRYLTPS-NATFLSYQIRIPENQIDS-TKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 + GK+ F+P++P TR++M + N TFE L +R W + ++N++ N + +L+ + + E + + L+ + Q + + L + C L+K +E+ V ++ + F V+ +D + TP + +IR+ ID T+ K+ D+FW P + L D +Y GF+ LQ+ ++RA + +++ G +Q MPYPCYVDD+F+R ++ +P L +AW+ SVT +K++V EKE RL++ MR MGL +V W+GWFLS + + ++ L+L IL +S VVFL L + V+ + Q F++S FFS ANLA+ GG+ YF LY+P+V+ + + L G L + VAF + E+ EGA + N+ D+ F + +L++D+ LY WY+E+V PGQYG+ + W F F R+YW + A D + E L G+S+R+L K +PG+ Sbjct: 291 ILGKLLFAPDTPFTRKLMAQVNRTFEELTLLRDVREVWEMLGPRIFTFMNDSSNVAMLQRLLQMQDEGRRQPRPGGRDHMEALRSFLDPGSGGYSWQDAHADVGHLVGTLGRVTECLSLDKLEAAPSEAALVSRALQLLAEHRFWAGVVFLGPEDSSDPTEHPTPDLGPGHVRIKIRM---DIDVVTRTNKIRDRFWDPGPAADPLTDLRYVWGGFVYLQDLVERAAVRVLSGANP-RAGLYLQQMPYPCYVDDVFLRVLSRSLPLFLTLAWIYSVTLTVKAVVREKETRLRDTMRAMGLSRAVLWLGWFLSCLGPFLLSAALLVLVLKLGDILPYSHPGVVFLFLAAFAVATVTQSFLLSAFFSRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAGGRVAASLLSPVAFGFGCESLALLEEQGEGAQWHNVGTRPTADV-FSLAQVSGLLLLDAALYGLATWYLEAVCPGQYGIPEPWNFPFRRSYWCGPR------PPKSPAPCPTPLDPKVLVEEAPPGLSPGVSVRSLEKRFPGS 819 HSP 2 Score: 55.4546 bits (132), Expect = 4.358e-7 Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNK 333 F QL +LLWKNF ++R+P+ L+ E+L PL + I+V VR+S + C F K + S G VP++ C N TC+ + Sbjct: 3 FWTQLMLLLWKNFMYRRRQPVQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLICNVNNTCFPQ 84
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA4 (ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]) HSP 1 Score: 219.55 bits (558), Expect = 7.843e-59 Identity = 161/554 (29.06%), Postives = 271/554 (48.92%), Query Frame = 1 Query: 796 VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSC---KSWYFYFDNNLCE---TVNAVLNFQ---------------TIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVF------AVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHD--INNSAQLIIDYDSEGN--------FENEYTDLRVGISIRNLVKTY 2346 + GKI ++P+SP R I++ AN TFE L+++R W I +NS +N ++ + + + L E T A+LNF + I N L+ + L C L+KF ES E + Q S+ A +V D + + T S + Y+IR+ + ++ T K+ D++W + PR + + DF+Y GF LQ+ +++ E VG +Q MPYPC+VDD F+ + P +V+AW+ SV+ +KSIV EKE RLKE ++ G+ N+V W WFL + ++ + ++++ +++ IL +S ++FL LL + + I F++S FFS A+LA+ GVIYF LY+P ++ Q ++ L + VAF ++ +E+ G + N+ + +F M M+++D+ +Y +AWY++ VFPG YG WYFL +YW E S + + + L + + + FE E+ G+ ++NLVK + Sbjct: 394 LMGKILYTPDSPAARRILKNANSTFEELEHVRKLVKAWE-EVGPQIWYFFDNSTQMNMIRDTLGNPTVKDFLNRQLGEEGITAEAILNFLYKGPRESQADDMANFDWRDIFNITDRTLRLVNQYLECLVLDKF----ESYNDETQLTQRALSLLEENMFWAGVVFPDMYPW-TSSLPPHVKYKIRMDIDVVEKTN--KIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGITRSQVQAEA-PVGIYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTIFIMHGRILHYSDPFILFLFLLAFSTATIMLCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTAELKKAVSLLSPVAFGFGTEYLVRFEEQGLGLQWSNIGNSPTEGDEFSFLLSMQMMLLDAAVYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEETEDPEHPEGIHDSFFEREHPGWVPGVCVKNLVKIF 938 HSP 2 Score: 56.225 bits (134), Expect = 2.798e-7 Identity = 32/111 (28.83%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTL 420 F +Q+++LLWKN+ L+KR+ I + E++ PL + ++++ +RN+ + C F K+M S G +P++ FC N C+ + S Y + + +Y +Q L Sbjct: 3 FVRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSHHECHFPNKAMPSAGMLPWLQGIFCNVNNPCFQSPTPGESPGIVSNYNNSILAR-VYRDFQEL 112
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA12 (ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]) HSP 1 Score: 192.971 bits (489), Expect = 4.916e-50 Identity = 147/562 (26.16%), Postives = 272/562 (48.40%), Query Frame = 1 Query: 784 ISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR------LHFRDWINEAVNNSKLINELKSCKSWYFY-----FDN-NLCETVNAV----LNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKS------VFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENIS---------------LAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 + + G+I ++P +P+T+ IM ++N+T L +R S EW ++ +N+A+ L N L++ F D L + ++ + L + I+++++ + SL +C ++ +E K+ KS V L N ++ S FL Y IR+ +T+ + K W P + + Y F+ LQ++I+RA IE+ T + ++ +Q +PYPC++ D F+ ++ +P +L++AWV + +K +VYEK+ RL E+M++MG+ + H+ W + +V L+ + I+ ++L + +IL + ++FL Y S I ++IS+FF+N N+A++ G +IY I + PF+V + ++++LS L + AF A +I +E+ G + N++ + D G +++ DS +Y +AWYV +VFPG YG+ WYF +YW+ + + + + N SA +Y N E E DL VG+++ + K Y Sbjct: 483 LKPMLLGRILYAPYNPVTKAIMEKSNVTLRQLAELREKSQEWMDKSPLFMNSFHLLNQAI--PMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLKLENNIDIIDQLNTLSSLTVNISSCVLYDRIQAAKTIDEMEREAKRLYKSNELFGSVIFKLPSNRSWHRGYDSGNVFLPPVIKYTIRMSLKTAQTTRSLRT--KIWAPGPHNSPSHN-QIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIVILIIILKFGNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLVTVENELSYVLKVFMSLLSPTAFSYASQYIARYEEQGIGLQWENMYTSPVQDDTTSFGWLCCLILADSFIYFLIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKPEKSNGLMFTNIMMQNTNPSAS--PEYMFSSNIEPEPKDLTVGVALHGVTKIY 1037
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA12 (ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]) HSP 1 Score: 192.971 bits (489), Expect = 4.971e-50 Identity = 147/562 (26.16%), Postives = 272/562 (48.40%), Query Frame = 1 Query: 784 ISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR------LHFRDWINEAVNNSKLINELKSCKSWYFY-----FDN-NLCETVNAV----LNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKS------VFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENIS---------------LAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 + + G+I ++P +P+T+ IM ++N+T L +R S EW ++ +N+A+ L N L++ F D L + ++ + L + I+++++ + SL +C ++ +E K+ KS V L N ++ S FL Y IR+ +T+ + K W P + + Y F+ LQ++I+RA IE+ T + ++ +Q +PYPC++ D F+ ++ +P +L++AWV + +K +VYEK+ RL E+M++MG+ + H+ W + +V L+ + I+ ++L + +IL + ++FL Y S I ++IS+FF+N N+A++ G +IY I + PF+V + ++++LS L + AF A +I +E+ G + N++ + D G +++ DS +Y +AWYV +VFPG YG+ WYF +YW+ + + + + N SA +Y N E E DL VG+++ + K Y Sbjct: 801 LKPMLLGRILYAPYNPVTKAIMEKSNVTLRQLAELREKSQEWMDKSPLFMNSFHLLNQAI--PMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLKLENNIDIIDQLNTLSSLTVNISSCVLYDRIQAAKTIDEMEREAKRLYKSNELFGSVIFKLPSNRSWHRGYDSGNVFLPPVIKYTIRMSLKTAQTTRSLRT--KIWAPGPHNSPSHN-QIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIVILIIILKFGNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLVTVENELSYVLKVFMSLLSPTAFSYASQYIARYEEQGIGLQWENMYTSPVQDDTTSFGWLCCLILADSFIYFLIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKPEKSNGLMFTNIMMQNTNPSAS--PEYMFSSNIEPEPKDLTVGVALHGVTKIY 1355
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: abt-2 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q1RS86]) HSP 1 Score: 173.326 bits (438), Expect = 3.394e-44 Identity = 159/559 (28.44%), Postives = 274/559 (49.02%), Query Frame = 1 Query: 766 SNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIR---------LASIEWRLHFRD-WINEAVNNSKLINELK---------SCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLT------PSNAT----FLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA---KENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 S I + + G I +P++P+TR ++ R NI ++++R + RLH D W + KL++ +K + ++ +F+ ++ + + +F T + +I+ K C L++F + + +E + + DT +Y T SNAT F +Y+IR +DST F D R + L D KY T GF LQE+IDRA + +TN ++G Q PYPC V D F + MP L+I+++ L+K+IVYEKE+++KE MR MGLG++VH+I W L ++V+ V I+S++ + I ++ + ++ VL+L++ S I S F+NAN+A+ A V++F+ ++PF + +R S F + + A + + + + E A + +L++ L V CM+ML+VD+ ++L +AWY+ +V PG +GV + +F FT YW K + D I + DS F++E T+L + + I ++ K Y Sbjct: 375 SPILMKVREALSGYILVTPDNPVTRRVVDRLNIPLRDIEHLRNLLYTYPSDALEFQDRLHASDLW----PASQKLLHFIKVYKNGQNQLNTRTIHFFLEHLFAPSSDEY-SFGTYTKNITEIA------NKYTGCFLLDRFRFVTDEKELET----------NAVCLMDTHQYFTGIVFNIDSNATEFDGFTTYKIRHYPEMVDSTTSF--MDSKSNPFSRDKPLIDLKYITFGFSFLQESIDRAIMSELTNQTDANLGVYAQQEPYPCTVKDTF--NVALFMPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHFISWGLISLVLNFISVLIISIISKVAKIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTNANIATAATCVLWFVFFIPFQL-LRTDRISSPTFNRISLILPPTAMGHCFKLLESF-NAMERATWSDLWEMNNPVLGISVELCMIMLVVDTAVFLILAWYISAVAPGDFGVRQPLWFPFTLKYWAPGLYKNRVEFVDD--EHFDTIPNSDS---FDSEPTNLTLAVHINSMSKVY 901
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: abt-2 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q1RS86]) HSP 1 Score: 173.326 bits (438), Expect = 4.121e-44 Identity = 159/559 (28.44%), Postives = 274/559 (49.02%), Query Frame = 1 Query: 766 SNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIR---------LASIEWRLHFRD-WINEAVNNSKLINELK---------SCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLT------PSNAT----FLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA---KENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 S I + + G I +P++P+TR ++ R NI ++++R + RLH D W + KL++ +K + ++ +F+ ++ + + +F T + +I+ K C L++F + + +E + + DT +Y T SNAT F +Y+IR +DST F D R + L D KY T GF LQE+IDRA + +TN ++G Q PYPC V D F + MP L+I+++ L+K+IVYEKE+++KE MR MGLG++VH+I W L ++V+ V I+S++ + I ++ + ++ VL+L++ S I S F+NAN+A+ A V++F+ ++PF + +R S F + + A + + + + E A + +L++ L V CM+ML+VD+ ++L +AWY+ +V PG +GV + +F FT YW K + D I + DS F++E T+L + + I ++ K Y Sbjct: 412 SPILMKVREALSGYILVTPDNPVTRRVVDRLNIPLRDIEHLRNLLYTYPSDALEFQDRLHASDLW----PASQKLLHFIKVYKNGQNQLNTRTIHFFLEHLFAPSSDEY-SFGTYTKNITEIA------NKYTGCFLLDRFRFVTDEKELET----------NAVCLMDTHQYFTGIVFNIDSNATEFDGFTTYKIRHYPEMVDSTTSF--MDSKSNPFSRDKPLIDLKYITFGFSFLQESIDRAIMSELTNQTDANLGVYAQQEPYPCTVKDTF--NVALFMPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHFISWGLISLVLNFISVLIISIISKVAKIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTNANIATAATCVLWFVFFIPFQL-LRTDRISSPTFNRISLILPPTAMGHCFKLLESF-NAMERATWSDLWEMNNPVLGISVELCMIMLVVDTAVFLILAWYISAVAPGDFGVRQPLWFPFTLKYWAPGLYKNRVEFVDD--EHFDTIPNSDS---FDSEPTNLTLAVHINSMSKVY 938
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: abt-4 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q9TXV8]) HSP 1 Score: 129.413 bits (324), Expect = 3.143e-30 Identity = 98/334 (29.34%), Postives = 171/334 (51.20%), Query Frame = 1 Query: 1366 YYTSGFLLLQEAIDRAFIEIVTNNET--IDVGSSMQI--MPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVF--IRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQL-IIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 Y+ GF+ +Q A+D A EI+T + + S Q+ P+P Y + I MP +++ +++ SV +++++V EKE RLKE+MRVMGL ++W+ F+ L F V ++++L+ + ++ S VFL++ + V + FMIS F ++A A++ V + +LY + F I + G+ + ++ +A + + +E +G +G LF D GH ++ LIVD ++ + + WY+E+V PG GV + +F +YW S + +++S Q I Y E E TDL I++ NL KTY Sbjct: 266 YWQEGFMTVQRAVDVAITEIITGEDAQLTPLLDSYQVSRFPFPGYSTKI-IEIGAFFMPVIVIFSFMTSVIYIVRAVVVEKEDRLKEYMRVMGLSQFINWVAHFIINYAKLTFAVIVLTILMHFVALKSDMTLMFVFLMIYAFDVVYFA--FMISSFMNSATSATLISVVFWMLLYFWYAFFSSIDQTNPYPLGYRLINCINPDIALNYGLQLLAAYETQADGLKWGELFTPPSPDNNLTFGHALIALIVDGIIMIILTWYIEAVIPGGEGVPQKPWFFVLPSYWFPN---SGSKTVDSSDQFQQIQYADHVKLEKEPTDLIPTINVVNLTKTY 593
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332489) HSP 1 Score: 154.066 bits (388), Expect = 5.953e-38 Identity = 101/346 (29.19%), Postives = 175/346 (50.58%), Query Frame = 1 Query: 1336 PRRETLRDFK----YYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLS-----TVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 PR E D Y GFL LQ ++ A++ + + + M+ P+P Y+ D + ++++M +++++++ T + K I EKE++LKE M++MGL N +HW WF+ T+ ++ + + ++L+ + F + L++Y+VS IC FM++ FFS A+ A+ G+I+FI Y+P+ I DLS L + A I I +E + EG + N F +D +G M+M++V V+Y+ + YVE V PG +GV + W F FTR +W + + DI N ++ FE E +G+ +R+L K + Sbjct: 184 PRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIPNGH---VEQRDPKAFETEPEGKHIGLQMRHLKKRF 525
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332488) HSP 1 Score: 153.68 bits (387), Expect = 7.012e-38 Identity = 101/346 (29.19%), Postives = 175/346 (50.58%), Query Frame = 1 Query: 1336 PRRETLRDFK----YYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLS-----TVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 PR E D Y GFL LQ ++ A++ + + + M+ P+P Y+ D + ++++M +++++++ T + K I EKE++LKE M++MGL N +HW WF+ T+ ++ + + ++L+ + F + L++Y+VS IC FM++ FFS A+ A+ G+I+FI Y+P+ I DLS L + A I I +E + EG + N F +D +G M+M++V V+Y+ + YVE V PG +GV + W F FTR +W + + DI N ++ FE E +G+ +R+L K + Sbjct: 184 PRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIPNGH---VEQRDPKAFETEPEGKHIGLQMRHLKKRF 525
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0306679) HSP 1 Score: 153.68 bits (387), Expect = 7.023e-38 Identity = 101/346 (29.19%), Postives = 175/346 (50.58%), Query Frame = 1 Query: 1336 PRRETLRDFK----YYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLS-----TVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 PR E D Y GFL LQ ++ A++ + + + M+ P+P Y+ D + ++++M +++++++ T + K I EKE++LKE M++MGL N +HW WF+ T+ ++ + + ++L+ + F + L++Y+VS IC FM++ FFS A+ A+ G+I+FI Y+P+ I DLS L + A I I +E + EG + N F +D +G M+M++V V+Y+ + YVE V PG +GV + W F FTR +W + + DI N ++ FE E +G+ +R+L K + Sbjct: 206 PRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIPNGH---VEQRDPKAFETEPEGKHIGLQMRHLKKRF 547
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: CG6052 (gene:FBgn0036747 transcript:FBtr0075195) HSP 1 Score: 130.954 bits (328), Expect = 1.147e-30 Identity = 107/397 (26.95%), Postives = 191/397 (48.11%), Query Frame = 1 Query: 1207 INDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGS-SMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPV-----TIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLS-----------AQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 I DT+R ++ FLSY N++D+ V Y GFL +Q A+ +++ + + + + +Q PY Y D + + ++PF+++++++ + + K + EKE +LKE M+++G+ N +HW+ WF+ + ++L+ V IM ++L+FS + V L L YVV+ +C FM+++ FS A+ AS + +F+ Y+P+ S G+YY LS + A I+ I WE + EG + N+F D + + ++ + S++++S+ YVE VFPG+YGV + W F+ +NYWR + +I S Q I+ ++ + VGI + NL K Y Sbjct: 164 IIDTWR----TSRLFLSYDTSGSRNRLDNDGGVPV-----------------GYIREGFLPIQHALTMSWLALASGVTDTGIPAIHLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPASTVTKYVTSEKELQLKEIMKLIGVHNWLHWVAWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCLCFMLAVLFSKASTASAVAAIFWFLTYIPY----------SFGYYYYERLSLMSKLLISLIFSNSALGFGIHVIVMWEGTGEGITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVEQVFPGEYGVPRRWNFMCHKNYWR---QYVPSLNIVPSFQTILHGSAKAKSCRRARE--VGIQLFNLQKNY 524
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: CG31213 (gene:FBgn0051213 transcript:FBtr0335242) HSP 1 Score: 100.908 bits (250), Expect = 2.278e-21 Identity = 96/352 (27.27%), Postives = 166/352 (47.16%), Query Frame = 1 Query: 1354 RDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW---------------------RAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 +DFKY+ SGFLLLQE I + FI M PYP YV + + M L+ ++P +T + K +V EKER K + MG NS+HW+ W+ ++++L+ + IM + I FS + + L+Y+ S + F IS FFS + A VA ++YF +PF++ S ++ GL++ + + ++ + E + GA + + + A K + ML++I S + L + Y+E+V G++ V + W + F R YW ++ N+ AH + +D ++ NF+ ++GI +R+L KT+ Sbjct: 153 KDFKYFESGFLLLQERISKIFIFFKNAGNGKIPRVLMNHFPYPSYVPNHYAESAKAMTYMTLISFFLPCIT-IAKYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSVAAQTAASIGLNSALFYI--LDSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQPI-IYLDDRTQENFQRVNISKKIGIEVRSLSKTF 500
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca1b (ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]) HSP 1 Score: 254.603 bits (649), Expect = 1.108e-70 Identity = 192/646 (29.72%), Postives = 320/646 (49.54%), Query Frame = 1 Query: 559 TENLTASKPIIIQ-IFKVFCGSDE--------------NDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYF------YFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW---RAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 TEN T S ++ Q + ++ CG E ++F + + + V N + + N + RN E + I+ + + GKI ++P+SP T++I+ N TF+ L +R W R + + NS NE+ ++ +F L T V V++F + S + N+ + + + C L+K P++ T E + + M + +A +V D PSN++ L +Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ ++ + I VT ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ LLL ++L +S VVFL L + V I Q F+IS F+ ANLA+ GG+IYF LY+P+V+ + Q + + L + VAF + +E+ G + NLF + + + + C++++ D+ LY + WY+E+VFPGQYG+ + WYF FT++YW + N ++ +N+ + I E E T L++G+ I NLVK Y Sbjct: 293 TENATGSPSLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGNHNDSDDQPVPVYDNTTTPYCN----SMMRNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMWE-EARPKVWNFMENS---NEMDLMRTLLLNNLTANFFSAQLAGTQWSVEDVISFLSKHSEDTRPQGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVS---TEEKLVNESMSLLDNRKFWAGIVFLDI-----PSNSSELPPNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYIWGGFSYLQDVVEHSIIRAVTGSKE-KTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFAAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPVEEDDYNLTTCLILMYFDAFLYGVMTWYIETVFPGQYGIPRPWYFPFTKSYWFGENSTNNTAIHGKKSNAGAVCI--------EEEPTHLKLGVYIENLVKVY 911
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca1b (ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]) HSP 1 Score: 254.603 bits (649), Expect = 1.294e-70 Identity = 192/646 (29.72%), Postives = 320/646 (49.54%), Query Frame = 1 Query: 559 TENLTASKPIIIQ-IFKVFCGSDE--------------NDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYF------YFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW---RAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 TEN T S ++ Q + ++ CG E ++F + + + V N + + N + RN E + I+ + + GKI ++P+SP T++I+ N TF+ L +R W R + + NS NE+ ++ +F L T V V++F + S + N+ + + + C L+K P++ T E + + M + +A +V D PSN++ L +Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ ++ + I VT ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ LLL ++L +S VVFL L + V I Q F+IS F+ ANLA+ GG+IYF LY+P+V+ + Q + + L + VAF + +E+ G + NLF + + + + C++++ D+ LY + WY+E+VFPGQYG+ + WYF FT++YW + N ++ +N+ + I E E T L++G+ I NLVK Y Sbjct: 293 TENATGSPSLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGNHNDSDDQPVPVYDNTTTPYCN----SMMRNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMWE-EARPKVWNFMENS---NEMDLMRTLLLNNLTANFFSAQLAGTQWSVEDVISFLSKHSEDTRPQGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVS---TEEKLVNESMSLLDNRKFWAGIVFLDI-----PSNSSELPPNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYIWGGFSYLQDVVEHSIIRAVTGSKE-KTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFAAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPVEEDDYNLTTCLILMYFDAFLYGVMTWYIETVFPGQYGIPRPWYFPFTKSYWFGENSTNNTAIHGKKSNAGAVCI--------EEEPTHLKLGVYIENLVKVY 911
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca1a (ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]) HSP 1 Score: 254.603 bits (649), Expect = 1.406e-70 Identity = 166/549 (30.24%), Postives = 279/549 (50.82%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSK---LINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKE---NISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 I+ + + GKI ++P++P T+ I+ N TF+ L +R W R I + NS+ L+ L + +F+ L T V V F + S + N+ + + + C L+K P+ NE V ++ F ++ + T ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+ I +T ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S V++L L + V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q+ + G + L + VAF + +E+ G + NL + + + + + +++ DSVLY + WY+E+VFPGQYG+ + WYF FT++YW ++ S+ + +A+ + E E + G+ I NL+K Y Sbjct: 376 IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWE-EMRPKIWNFMENSEEMDLVRTLLQNNASARFFNAKLSGTEWRVEDVSRFLSKSSEDTRPHGTAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDDRKFWAGIVFPDMQSNTSDLPLNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYIWGGFTYLQDVIEHGIIRALTGSKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGVIYLFLSSFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQNYVGFGAKIVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYNLTTSICLMLFDSVLYAVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTTSVPSNRKENAEAVC-------IEEEPAHIDPGVYIENLMKIY 913
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca1a (ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]) HSP 1 Score: 254.603 bits (649), Expect = 1.406e-70 Identity = 166/549 (30.24%), Postives = 279/549 (50.82%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSK---LINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKE---NISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 I+ + + GKI ++P++P T+ I+ N TF+ L +R W R I + NS+ L+ L + +F+ L T V V F + S + N+ + + + C L+K P+ NE V ++ F ++ + T ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+ I +T ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S V++L L + V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q+ + G + L + VAF + +E+ G + NL + + + + + +++ DSVLY + WY+E+VFPGQYG+ + WYF FT++YW ++ S+ + +A+ + E E + G+ I NL+K Y Sbjct: 376 IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWE-EMRPKIWNFMENSEEMDLVRTLLQNNASARFFNAKLSGTEWRVEDVSRFLSKSSEDTRPHGTAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDDRKFWAGIVFPDMQSNTSDLPLNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYIWGGFTYLQDVIEHGIIRALTGSKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGVIYLFLSSFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQNYVGFGAKIVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYNLTTSICLMLFDSVLYAVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTTSVPSNRKENAEAVC-------IEEEPAHIDPGVYIENLMKIY 913
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: zgc:172302 (zgc:172302 [Source:ZFIN;Acc:ZDB-GENE-081205-5]) HSP 1 Score: 251.521 bits (641), Expect = 4.930e-70 Identity = 181/621 (29.15%), Postives = 302/621 (48.63%), Query Frame = 1 Query: 604 KVFCGSDENDFTEF----YYKFSSIST---KNVSGQTNAGSQFMNESNVTCERNFENFFGNSN---IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR---LHFRDWINEAVNNSKLINELKSCKSWYFYFD---NNLCETVNAVLNFQTIQS---------------ILNKISLMFSLLEKTLNCTELNKFMPINESITVEN-FIKQPMK--------SVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 ++ CG E +Y+ I + +N S +T+ + N + CE +N N ++ I GK+ ++P++P+TR IM N TF+ + ++ W+ + ++ +V +L+ +L + N T + + F + Q + ++ F+ L + C LNK E +T E +++ ++ + L+ N + L P + Y+IR+ + D T+ K+ DKFW P E D +Y GF+ +Q+ ++RA ++T E G +Q MPYPC+VDD+FIR + +P + +AW+ SV +IK +VYEKE RLKE MR+MGLG+ + W WF+S+ + +F ++ L + IL +S AVVF L + + I F+IS FFS ANLA+ GG+IYF LY+P+V+ + + L++ L + VAF + +E+ G + NL + + ++ML D+++Y WY+E+VFPGQYG+ + WYF+F NYW + L I + + + + E E T+L +G+SIRNLVK Y Sbjct: 315 RIMCGHPEAGGERIPSFNWYEDQDIKSFLGRNASEETSLEND--NSTTSFCENLIQNLESNPLSRIVWRGIKPLFIGKLLYTPDTPITRTIMSEVNKTFQDFEILKDVHEAWQEVGPRIKTFMESSVE-IRLLQDLLRRPEVAVIVNMRLENTSWTASRIARFLSTQDPDTPRKDGAQLTWFDLYQDLNNTFTTLSELTKCFSLNKL----EGLTTEGEMVERALELLEDRQFWAGIVFLLPNSSSSVLPP----HVKYKIRMDID--DVTRTNKIKDKFWDPGPAAEPFSDMRYVWGGFVYVQDLVERAVTRLLTGKEA-KTGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSVAMIIKGVVYEKEARLKETMRIMGLGSGMLWFSWFISSYLPFLFSAALLIAALKWGDILPYSDPAVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFTLYLPYVLCVAWREYLTSTHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLKSSPMEGDTYSFNTSIMMLYADALIYALATWYIEAVFPGQYGIPRPWYFIFQLNYW-GGVPLELGLPIPPAPR----EEQDARIEAEPTNLILGVSIRNLVKIY 916
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 265.388 bits (677), Expect = 3.759e-74 Identity = 195/640 (30.47%), Postives = 316/640 (49.38%), Query Frame = 1 Query: 565 NLTASKPIIIQ-IFKVFCGSDENDFTEF----YYKFSSISTKNVSGQ----TNAGSQFMNESNVT--CE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVLNFQTI------------QSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNF--ENEYTDLRVGISIRNLVKTY 2346 N TAS + Q + ++ CG E + +Y+ ++ G+ T+ SQ +++ T C +N E+ I+ + + GKI ++P++P T+ +M N TF+ L R W R ++++ E+ LI L + K + D L E ++ L +T + LN+ + L + + C L+K P+ T E I + M + +A +V D P T L Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I + T E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + + VAF E+ G + NL + + + + + M++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW +E N + SEG F E E + L +G+SI+NLVK Y Sbjct: 241 NATASPSTLYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRMIWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFM-ESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETENGPFYSWREALNETDRVVLTLSRFMECVNLDKLEPV---ATEEMLIDKSMELLNERKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEY-----NQPHTVQKGSSEGMFCMEEEPSHLPLGVSIQNLVKIY 863
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 265.003 bits (676), Expect = 5.983e-74 Identity = 193/638 (30.25%), Postives = 314/638 (49.22%), Query Frame = 1 Query: 565 NLTASKPIIIQ-IFKVFCGSDENDFTEF----YYKFSSISTKNVSGQ----TNAGSQFMNESNVT--CE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVLNFQTI------------QSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 N TAS + Q + ++ CG E + +Y+ ++ G+ T+ SQ +++ T C +N E+ I+ + + GKI ++P++P T+ +M N TF+ L R W R ++++ E+ LI L + K + D L E ++ L +T + LN+ + L + + C L+K P+ T E I + M + +A +V D P T L Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I + T E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + + VAF E+ G + NL + + + + + M++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW +E N + SE E E + L +G+SI+NLVK Y Sbjct: 290 NATASPSTLYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRMIWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFM-ESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETENGPFYSWREALNETDRVVLTLSRFMECVNLDKLEPV---ATEEMLIDKSMELLNERKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEY-----NQPHTVQKGSSEVCMEEEPSHLPLGVSIQNLVKIY 910
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 264.618 bits (675), Expect = 8.679e-74 Identity = 193/638 (30.25%), Postives = 314/638 (49.22%), Query Frame = 1 Query: 565 NLTASKPIIIQ-IFKVFCGSDENDFTEF----YYKFSSISTKNVSGQ----TNAGSQFMNESNVT--CE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVLNFQTI------------QSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 N TAS + Q + ++ CG E + +Y+ ++ G+ T+ SQ +++ T C +N E+ I+ + + GKI ++P++P T+ +M N TF+ L R W R ++++ E+ LI L + K + D L E ++ L +T + LN+ + L + + C L+K P+ T E I + M + +A +V D P T L Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I + T E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + + VAF E+ G + NL + + + + + M++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW +E N + SE E E + L +G+SI+NLVK Y Sbjct: 288 NATASPSTLYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRMIWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFM-ESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETENGPFYSWREALNETDRVVLTLSRFMECVNLDKLEPV---ATEEMLIDKSMELLNERKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEY-----NQPHTVQKGSSEVCMEEEPSHLPLGVSIQNLVKIY 908
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 264.618 bits (675), Expect = 8.767e-74 Identity = 193/638 (30.25%), Postives = 314/638 (49.22%), Query Frame = 1 Query: 565 NLTASKPIIIQ-IFKVFCGSDENDFTEF----YYKFSSISTKNVSGQ----TNAGSQFMNESNVT--CE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVLNFQTI------------QSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 N TAS + Q + ++ CG E + +Y+ ++ G+ T+ SQ +++ T C +N E+ I+ + + GKI ++P++P T+ +M N TF+ L R W R ++++ E+ LI L + K + D L E ++ L +T + LN+ + L + + C L+K P+ T E I + M + +A +V D P T L Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I + T E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + + VAF E+ G + NL + + + + + M++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW +E N + SE E E + L +G+SI+NLVK Y Sbjct: 258 NATASPSTLYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRMIWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFM-ESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETENGPFYSWREALNETDRVVLTLSRFMECVNLDKLEPV---ATEEMLIDKSMELLNERKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEY-----NQPHTVQKGSSEVCMEEEPSHLPLGVSIQNLVKIY 878
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 264.618 bits (675), Expect = 8.790e-74 Identity = 193/638 (30.25%), Postives = 314/638 (49.22%), Query Frame = 1 Query: 565 NLTASKPIIIQ-IFKVFCGSDENDFTEF----YYKFSSISTKNVSGQ----TNAGSQFMNESNVT--CE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVLNFQTI------------QSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 N TAS + Q + ++ CG E + +Y+ ++ G+ T+ SQ +++ T C +N E+ I+ + + GKI ++P++P T+ +M N TF+ L R W R ++++ E+ LI L + K + D L E ++ L +T + LN+ + L + + C L+K P+ T E I + M + +A +V D P T L Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I + T E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + + VAF E+ G + NL + + + + + M++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW +E N + SE E E + L +G+SI+NLVK Y Sbjct: 292 NATASPSTLYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRMIWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFM-ESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETENGPFYSWREALNETDRVVLTLSRFMECVNLDKLEPV---ATEEMLIDKSMELLNERKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEY-----NQPHTVQKGSSEVCMEEEPSHLPLGVSIQNLVKIY 912
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca1 (ATP-binding cassette, sub-family A (ABC1), member 1 [Source:MGI Symbol;Acc:MGI:99607]) HSP 1 Score: 272.322 bits (695), Expect = 1.557e-76 Identity = 179/561 (31.91%), Postives = 296/561 (52.76%), Query Frame = 1 Query: 739 RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDWI-NEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVL--NFQTIQS----------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM--KSVFAVLVINDTFRYLTPSNATF---LSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 +N E+ + I+ + + GKI ++P++P TR++M N TF+ L W L + W E L+ L + +++ L + + A L N + +QS N+ + + + + C LNK PI + + N + + + +A +V F +TP + + Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I ++T +E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IKSIVYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ ++L ++L +S +VVF+ L ++ + I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + L + VAF + +E+ G + NLF+ + + F + + M++ D+ LY + WY+E+VFPGQYG+ + WYF T++YW +E +H S+Q + SE E E T LR+G+SI+NLVK Y Sbjct: 360 KNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPQIWTFMENSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNGSVYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIV----FTGITPDSVELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEK-KTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIVYEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAMVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKSHP--GSSQKGV---SEICMEEEPTHLRLGVSIQNLVKVY 908
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca7 (ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]) HSP 1 Score: 223.787 bits (569), Expect = 2.066e-60 Identity = 162/548 (29.56%), Postives = 269/548 (49.09%), Query Frame = 1 Query: 784 ISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRL---HFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNK-------------ISLMFSLLEKTLNCTELNKF--MPINESITVENFIKQPMKSVFAVLVINDTFRYLTPS-------NATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPG 2352 + + GKI F+P++ TR++M + N TFE L +R W + +++N++ N + L L + +T A + I+ L+ + + +L + + C L+K +P E++ + ++A +V L PS + L ++IR+ + D T+ K+ DKFW P + D +Y GF+ LQ+ +++A + ++ + G +Q MP+PCYVDD+F+R ++ +P L +AW+ SV +K++V EKE RL+E MR MGL +V W+GWFLS + + ++ L+L +IL +S V+FL L + V+ + Q F++S FFS ANLA+ GG+ YF LY+P+V+ + + L G L + VAF + E+ +GA + NL G D+ F + L++D+V+Y WY+E+V PGQYG+ + W F F R+YW +S D + E L G+SIR L K + G Sbjct: 284 LKPLILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMNDSTNVAMLQRLLDVGGT------GQRQQTPRAQKKLEAIKDFLDPSRGGYSWREAHADMGRLAGILGQMMECVSLDKLEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDPSELSSPALSPGHLRFKIRM--DIDDVTRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQAAVRVLGGGNS-RTGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLGNILPYSHPVVIFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLHLGGLLAASLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDV-FSLAQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGP------GPPKSSVLAPAPQDPKVLVEEPPLGLVPGVSIRGLKKHFRG 815 HSP 2 Score: 52.7582 bits (125), Expect = 2.122e-6 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 97 QLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYN 330 QL +LLWKN+ ++R+PI L+ E+L PL + I+V VR+S + C F K + S G VP++ C N +C+ Sbjct: 6 QLMLLLWKNYTYRRRQPIQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLVCNVNNSCFQ 83
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca7 (ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]) HSP 1 Score: 223.787 bits (569), Expect = 2.281e-60 Identity = 162/552 (29.35%), Postives = 271/552 (49.09%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRL---HFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNK-------------ISLMFSLLEKTLNCTELNKF--MPINESITVENFIKQPMKSVFAVLVINDTFRYLTPS-------NATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPG 2352 ++ + + GKI F+P++ TR++M + N TFE L +R W + +++N++ N + L L + +T A + I+ L+ + + +L + + C L+K +P E++ + ++A +V L PS + L ++IR+ + D T+ K+ DKFW P + D +Y GF+ LQ+ +++A + ++ + G +Q MP+PCYVDD+F+R ++ +P L +AW+ SV +K++V EKE RL+E MR MGL +V W+GWFLS + + ++ L+L +IL +S V+FL L + V+ + Q F++S FFS ANLA+ GG+ YF LY+P+V+ + + L G L + VAF + E+ +GA + NL G D+ F + L++D+V+Y WY+E+V PGQYG+ + W F F R+YW +S D + E L G+SIR L K + G Sbjct: 280 LWRRLKPLILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMNDSTNVAMLQRLLDVGGT------GQRQQTPRAQKKLEAIKDFLDPSRGGYSWREAHADMGRLAGILGQMMECVSLDKLEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDPSELSSPALSPGHLRFKIRM--DIDDVTRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQAAVRVLGGGNS-RTGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLGNILPYSHPVVIFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLHLGGLLAASLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDV-FSLAQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGP------GPPKSSVLAPAPQDPKVLVEEPPLGLVPGVSIRGLKKHFRG 815 HSP 2 Score: 52.7582 bits (125), Expect = 2.176e-6 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 97 QLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYN 330 QL +LLWKN+ ++R+PI L+ E+L PL + I+V VR+S + C F K + S G VP++ C N +C+ Sbjct: 6 QLMLLLWKNYTYRRRQPIQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLVCNVNNSCFQ 83
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca7 (ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]) HSP 1 Score: 223.787 bits (569), Expect = 2.281e-60 Identity = 162/552 (29.35%), Postives = 271/552 (49.09%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRL---HFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNK-------------ISLMFSLLEKTLNCTELNKF--MPINESITVENFIKQPMKSVFAVLVINDTFRYLTPS-------NATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPG 2352 ++ + + GKI F+P++ TR++M + N TFE L +R W + +++N++ N + L L + +T A + I+ L+ + + +L + + C L+K +P E++ + ++A +V L PS + L ++IR+ + D T+ K+ DKFW P + D +Y GF+ LQ+ +++A + ++ + G +Q MP+PCYVDD+F+R ++ +P L +AW+ SV +K++V EKE RL+E MR MGL +V W+GWFLS + + ++ L+L +IL +S V+FL L + V+ + Q F++S FFS ANLA+ GG+ YF LY+P+V+ + + L G L + VAF + E+ +GA + NL G D+ F + L++D+V+Y WY+E+V PGQYG+ + W F F R+YW +S D + E L G+SIR L K + G Sbjct: 280 LWRRLKPLILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMNDSTNVAMLQRLLDVGGT------GQRQQTPRAQKKLEAIKDFLDPSRGGYSWREAHADMGRLAGILGQMMECVSLDKLEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDPSELSSPALSPGHLRFKIRM--DIDDVTRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQAAVRVLGGGNS-RTGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLGNILPYSHPVVIFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLHLGGLLAASLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDV-FSLAQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGP------GPPKSSVLAPAPQDPKVLVEEPPLGLVPGVSIRGLKKHFRG 815 HSP 2 Score: 52.7582 bits (125), Expect = 2.176e-6 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 97 QLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYN 330 QL +LLWKN+ ++R+PI L+ E+L PL + I+V VR+S + C F K + S G VP++ C N +C+ Sbjct: 6 QLMLLLWKNYTYRRRQPIQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLVCNVNNSCFQ 83
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca4 (ATP-binding cassette, sub-family A (ABC1), member 4 [Source:MGI Symbol;Acc:MGI:109424]) HSP 1 Score: 223.402 bits (568), Expect = 3.449e-60 Identity = 167/553 (30.20%), Postives = 274/553 (49.55%), Query Frame = 1 Query: 796 VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDW-INEAVNNSKLINELKSCKSWYFYFDNNLCE---TVNAVLNF-----QTIQS----------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKS--VFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFI----RMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHD--INNSAQLIIDYDS----EGN----FENEYTDLRVGISIRNLVKTY 2346 + GKI F+P+SP R IM+ AN TFE LD +R W + + W E +I + + + + L E T AVLNF Q Q+ I N L + L C L+KF ++ + + ++ +A +V + + + S + Y+IR+ + ++ T K+ D++W + PR + + DF+Y GF LQ+ +++ ++ E +G +Q MPYPC+VDD F+ + P +V+AW+ SV+ +K IV EKE RLKE ++ G+ N+V W WFL + ++ + +++L +++ IL +S ++FL LL + + I Q F++S FS A+LA+ GVIYF LY+P V+ RM +DL T L + VAF ++ +E+ G + N+ + +F M M+++D+ LY +AWY++ VFPG YG WYFL +YW E S + + + L + + EG FE E L G+ ++NLVK + Sbjct: 394 LMGKILFTPDSPAARRIMKNANSTFEELDRVRKLVKAWEEVGPQIWYFFEKSTQMTVIRDTLQHPTVKDFINRQLGEEGITTEAVLNFFSNGPQEKQADDMTSFDWRDIFNITDRFLRLANQYLECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPGMYPWAS-SLPPHVKYKIRMDIDVVEKTN--KIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVKSQMQAEP-PIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMALSIFLLTLFIMHGRILHYSDPFILFLFLLAFATATIMQSFLLSTLFSKASLAAACSGVIYFTLYLPHVLCFAWQDRMTADLKTTVSLL----SSVAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEMEDPEHPEGMNDSFFERELPGLVPGVCVKNLVKVF 938 HSP 2 Score: 56.225 bits (134), Expect = 1.940e-7 Identity = 27/81 (33.33%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYN 330 F +Q+++LLWKN+ L+KR+ I + E++ PL + ++++ +RN+ + C F K+M S G +P++ FC N C+ Sbjct: 3 FLRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGLLPWLQGIFCNMNNPCFQ 83
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|O95477|ABCA1_HUMAN (Phospholipid-transporting ATPase ABCA1 OS=Homo sapiens OX=9606 GN=ABCA1 PE=1 SV=3) HSP 1 Score: 274.248 bits (700), Expect = 2.430e-76 Identity = 178/561 (31.73%), Postives = 295/561 (52.58%), Query Frame = 1 Query: 739 RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDWI-NEAVNNSKLINELKSCKSWYFYFDNNLCE---TVNAVLNF-----QTIQS----------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM--KSVFAVLVINDTFRYLTPSNATF---LSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 +N E+ + I+ + + GKI ++P++P TR++M N TF+ L W L + W E L+ L + +++ L T ++ F + +QS N+ + + + + C LNK PI + + N + + + +A +V F +TP + + Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I ++T E G MQ MPYPCYVDD+F+R ++ MP + +AW+ SV +IK IVYEKE RLKE MR+MGL NS+ W WF+S+++ L+ ++ ++L ++L +S +VVF+ L ++ V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + L + VAF + +E+ G + NLF+ + + F + + M++ D+ LY + WY+E+VFPGQYG+ + WYF T++YW +E+ +H +N ++ SE E E T L++G+SI+NLVK Y Sbjct: 360 KNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLVRMLLDSRDNDHFWEQQLDGLDWTAQDIVAFLAKHPEDVQSSNGSVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVWLINKSMELLDERKFWAGIV----FTGITPGSIELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEK-KTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKRI-----SEICMEEEPTHLKLGVSIQNLVKVY 908
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|P41233|ABCA1_MOUSE (Phospholipid-transporting ATPase ABCA1 OS=Mus musculus OX=10090 GN=Abca1 PE=1 SV=4) HSP 1 Score: 272.322 bits (695), Expect = 1.089e-75 Identity = 179/561 (31.91%), Postives = 296/561 (52.76%), Query Frame = 1 Query: 739 RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDWI-NEAVNNSKLINELKSCKSWYFYFDNNL------CETVNAVL--NFQTIQS----------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM--KSVFAVLVINDTFRYLTPSNATF---LSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 +N E+ + I+ + + GKI ++P++P TR++M N TF+ L W L + W E L+ L + +++ L + + A L N + +QS N+ + + + + C LNK PI + + N + + + +A +V F +TP + + Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ +++A I ++T +E G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IKSIVYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ ++L ++L +S +VVF+ L ++ + I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + L + VAF + +E+ G + NLF+ + + F + + M++ D+ LY + WY+E+VFPGQYG+ + WYF T++YW +E +H S+Q + SE E E T LR+G+SI+NLVK Y Sbjct: 360 KNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPQIWTFMENSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNGSVYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIV----FTGITPDSVELPHHVKYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEK-KTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIVYEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAMVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKSHP--GSSQKGV---SEICMEEEPTHLRLGVSIQNLVKVY 908
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|Q8IZY2|ABCA7_HUMAN (Phospholipid-transporting ATPase ABCA7 OS=Homo sapiens OX=9606 GN=ABCA7 PE=1 SV=3) HSP 1 Score: 234.572 bits (597), Expect = 4.294e-63 Identity = 162/540 (30.00%), Postives = 269/540 (49.81%), Query Frame = 1 Query: 796 VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRL---HFRDWINEAVNNS---KLINELKSCKSWYFYFDNNLCETVNAVLNFQTI----QSILNKISLMFSLLEKTLNCTELNKF-MPINESITVENFIKQPMKSVFAVLVI-------NDTFRYLTPS-NATFLSYQIRIPENQIDS-TKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 + GK+ F+P++P TR++M + N TFE L +R W + ++N++ N + +L+ + + E + + L+ + Q + + L + C L+K +E+ V ++ + F V+ +D + TP + +IR+ ID T+ K+ D+FW P + L D +Y GF+ LQ+ ++RA + +++ G +Q MPYPCYVDD+F+R ++ +P L +AW+ SVT +K++V EKE RL++ MR MGL +V W+GWFLS + + ++ L+L IL +S VVFL L + V+ + Q F++S FFS ANLA+ GG+ YF LY+P+V+ + + L G L + VAF + E+ EGA + N+ D+ F + +L++D+ LY WY+E+V PGQYG+ + W F F R+YW + A D + E L G+S+R+L K +PG+ Sbjct: 291 ILGKLLFAPDTPFTRKLMAQVNRTFEELTLLRDVREVWEMLGPRIFTFMNDSSNVAMLQRLLQMQDEGRRQPRPGGRDHMEALRSFLDPGSGGYSWQDAHADVGHLVGTLGRVTECLSLDKLEAAPSEAALVSRALQLLAEHRFWAGVVFLGPEDSSDPTEHPTPDLGPGHVRIKIRM---DIDVVTRTNKIRDRFWDPGPAADPLTDLRYVWGGFVYLQDLVERAAVRVLSGANP-RAGLYLQQMPYPCYVDDVFLRVLSRSLPLFLTLAWIYSVTLTVKAVVREKETRLRDTMRAMGLSRAVLWLGWFLSCLGPFLLSAALLVLVLKLGDILPYSHPGVVFLFLAAFAVATVTQSFLLSAFFSRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAGGRVAASLLSPVAFGFGCESLALLEEQGEGAQWHNVGTRPTADV-FSLAQVSGLLLLDAALYGLATWYLEAVCPGQYGIPEPWNFPFRRSYWCGPR------PPKSPAPCPTPLDPKVLVEEAPPGLSPGVSVRSLEKRFPGS 819 HSP 2 Score: 55.4546 bits (132), Expect = 2.093e-6 Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNK 333 F QL +LLWKNF ++R+P+ L+ E+L PL + I+V VR+S + C F K + S G VP++ C N TC+ + Sbjct: 3 FWTQLMLLLWKNFMYRRRQPVQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLICNVNNTCFPQ 84
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|Q7TNJ2|ABCA7_RAT (ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus OX=10116 GN=Abca7 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.844e-62 Identity = 160/540 (29.63%), Postives = 274/540 (50.74%), Query Frame = 1 Query: 796 VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRL---HFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTI-------QSILNKISLMFSLLEKTLNCTELNKF--MPINESITVENFIKQPMKSVFAVLVIN------DTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW--RAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 + GKI F+P++ TR++M + N TFE L +R W + +++N++ N + L L + + + + A+ +F Q + + +L + L C L+K +P E++ + ++A +V D+ +P+ +++I + D T+ K+ DKFW P + L D +Y GF+ LQ+ +++A + +++ ++ G +Q MP+PCYVDD+F+R ++ +P L +AW+ SV +K++V EKE RL+E MR MGL +V W+GWFLS + + ++ L+L +IL +S VVFL L + V+ + Q F++S FFS ANLA+ GG+ YF LY+P+V+ + + L G L + VAF + E+ +GA + NL G D+ F + L++D+V+Y WY+E+V PGQYG+ + W F F R+YW S+ +++++ G L G+SIR L K + G+ Sbjct: 288 ILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMNDSTNVAMLQKLLDVEGTGWQQQTPKGQKQLEAIRDFLDPSRGRYNWQEAHADMGRLAEILGQILECVSLDKLEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDSSEPPSPTTTGPGHLRVKIRMDIDDVTRTNKIRDKFWDPGPSADPLMDLRYVWGGFVYLQDLLEQAAVRVLSGRDS-RAGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLGNILPYSHPVVVFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLPLGGLLAVSLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDV-FSLAQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGPGPPKSSVLAPAPQDPKVLVEEPPPG--------LVPGVSIRGLKKHFRGS 817 HSP 2 Score: 56.6102 bits (135), Expect = 9.604e-7 Identity = 34/111 (30.63%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTL 420 F QL +LLWKN+ ++R+PI L+ E+L PL + I+V VR+S + C F K + S G VP++ C N +C+ S + + ++ L + + L Sbjct: 3 FCTQLMLLLWKNYTYRRRQPIQLVVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLVCNVNNSCFQHPTPGEKPGVLSNFKDSLISRLLADAHTVL 113
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|O35600|ABCA4_MOUSE (Retinal-specific phospholipid-transporting ATPase ABCA4 OS=Mus musculus OX=10090 GN=Abca4 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 2.413e-59 Identity = 167/553 (30.20%), Postives = 274/553 (49.55%), Query Frame = 1 Query: 796 VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDW-INEAVNNSKLINELKSCKSWYFYFDNNLCE---TVNAVLNF-----QTIQS----------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKS--VFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFI----RMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHD--INNSAQLIIDYDS----EGN----FENEYTDLRVGISIRNLVKTY 2346 + GKI F+P+SP R IM+ AN TFE LD +R W + + W E +I + + + + L E T AVLNF Q Q+ I N L + L C L+KF ++ + + ++ +A +V + + + S + Y+IR+ + ++ T K+ D++W + PR + + DF+Y GF LQ+ +++ ++ E +G +Q MPYPC+VDD F+ + P +V+AW+ SV+ +K IV EKE RLKE ++ G+ N+V W WFL + ++ + +++L +++ IL +S ++FL LL + + I Q F++S FS A+LA+ GVIYF LY+P V+ RM +DL T L + VAF ++ +E+ G + N+ + +F M M+++D+ LY +AWY++ VFPG YG WYFL +YW E S + + + L + + EG FE E L G+ ++NLVK + Sbjct: 394 LMGKILFTPDSPAARRIMKNANSTFEELDRVRKLVKAWEEVGPQIWYFFEKSTQMTVIRDTLQHPTVKDFINRQLGEEGITTEAVLNFFSNGPQEKQADDMTSFDWRDIFNITDRFLRLANQYLECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPGMYPWAS-SLPPHVKYKIRMDIDVVEKTN--KIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVKSQMQAEP-PIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMALSIFLLTLFIMHGRILHYSDPFILFLFLLAFATATIMQSFLLSTLFSKASLAAACSGVIYFTLYLPHVLCFAWQDRMTADLKTTVSLL----SSVAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEMEDPEHPEGMNDSFFERELPGLVPGVCVKNLVKVF 938 HSP 2 Score: 56.225 bits (134), Expect = 1.357e-6 Identity = 27/81 (33.33%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYN 330 F +Q+++LLWKN+ L+KR+ I + E++ PL + ++++ +RN+ + C F K+M S G +P++ FC N C+ Sbjct: 3 FLRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGLLPWLQGIFCNMNNPCFQ 83
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A4X2KQE6 (ATP binding cassette subfamily A member 7 OS=Vombatus ursinus OX=29139 GN=ABCA7 PE=4 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 1.270e-80 Identity = 226/803 (28.14%), Postives = 370/803 (46.08%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCY----------NKTQIN----WNE-------------------NYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATNHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEF----YYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFDTISSW-----VFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQ----TIQSILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 F QL +LLWKNF +KRKP+ L+ E+L PL + +I+V VR S F+ C F K + S G +P+ C N CY ++T+ WNE + + +F++ +L V +P ++ + A + ++ L S L+ L A L+ A + + +V CG + E +Y+ + GQ S N ++ C++ E+ ++ + W V GKI ++P++PLTR +M N TF L ++ W + I+ +NNS + LK W N + L + + I+L+ + K L C L+K P+ E +E ++ + F V+ F L A +++I + D T+ K+ D+FW P + + D +Y GF+ LQ+ ++ A I ++ N+ +Q MPYPCYVDD+F+R + +P L +AW+ SV +K IV EKE RL++ M MGL SV W WF+S++V + +++ L+L IL S VFL L + V+ ICQ F+ S FS AN+A+ GG++YF LY+P+V+ + + L L + VAF + +E+ G + N+ + + + C +LI+D+ LY + WY+E++ PGQYG+ + W F F ++YW E S + D S D + E+ L+VG+S++ LVK YPG+ Sbjct: 3 FWTQLMLLLWKNFMYRKRKPVQLVIELLWPLFLFLILVAVRQSHPPFEHHECHFPNKPLPSAGMLPWFQGLLCNMNNPCYRYATPGETPVSRTECGRAGGWNEMGKDEGGGHVVSGSDSAAGSLGDLTSFQVRGSSL-GVPSPVPS-----HTSVGLAAHLSLQLSTLPS--------LAELRAELRRAPGPGGP-----VEGVSRVLCGKSRDQGVEIPSLNWYEDDDLKMMLGWGQGRLASPMDNSTSPFCQKLIESM--EAHPISRLLWWRLKPLVLGKILYTPDTPLTRRVMAEVNQTFHQLALLQELHGLW-MELGPQISSFMNNSAQVALLKVEMGWQLRLPRNGTSAIRTFLGLDGSGYSWKEAHEDITLIVDKVGKVLECVSLDKLEPVVTEDSLMERAVELLGQRRFWAGVV---FLGLQDGGAPG-HIRLKIRMDIDDVTRTNKIKDRFWDPGPAADPILDMRYVWGGFVYLQDLLEGAVIRVL-NSSAHPASIYLQQMPYPCYVDDVFLRVLNRSLPLFLTLAWIYSVALTVKGIVQEKEARLRDTMLAMGLDRSVLWGSWFVSSLVPFLVSSSLLVLILKQGDILPHSDPFPVFLFLAAFAVATICQSFLFSAAFSRANVAAACGGLLYFTLYLPYVLCVAWRDHLPPALRLAASLLSPVAFGFGCEYFSLYEEQGVGIQWHNMGRSPVAGDGYNLALCEALLILDAGLYATATWYIEAICPGQYGIPQPWNFPFRKSYW-CGELASASLDPTPSKD-----DPQVLVEDPSPGLQVGVSLQGLVKYYPGS 772
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A3Q3RRK1 (Zgc:172302 OS=Mastacembelus armatus OX=205130 PE=4 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 8.451e-79 Identity = 243/823 (29.53%), Postives = 393/823 (47.75%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENY-----SSIYAFK----MFTKNLYNVYQTLPKEK-LTVNS-----LITWATNHKFEIDQL--------ISNIMPIIK-LLSPL--------IASLKEADTENLTASKPIIIQIF-KVFCGSDENDFTEF----YYKFSSISTKNVSGQTNAGSQFMNESNVT-CERNFENFFGNSN---IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYI---RLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS---------------ILNKISLMFSLLEKTLNCTELNKFMPINESITVEN-FIKQPM-----KSVFA--VLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 F KQL +LLWKN ++R I LI E+L PL + +I++ VR+S +K C F K++ S G +P+I C N C++ +SI+ F+ +F N + LP E+ L N L+T ++ +DQL +S I K L +PL A+L+ TEN TA + F ++ CG E +Y+ + I K+ G+ ++ N C+ N ++ I GK+ ++PN+P +++M+ N TFE L + A IE ++++ +V +L+ +L + L +T V+ + +F + S I N I+ + L + C LNK E + E I + + + ++A V ++ +T P + T Y+IR+ + D T+ K+ D+FW P + D +Y GF+ +Q+ ++RA ++T + G +Q MPYPCYVDD+F+R + +P + +AW+ SV +IK +VYEKE RLKE MR+MGLG W+ W +S++V + ++ LL + IL +S VVF L+ + + I Q F+IS FFS ANLA+ GG+IYF LY+P+V+ + + L+T L + VAF + +E+ G + NL + + ++ML VD+ +Y AWY+E+VFPG+YG+ + WYF+F NYW + + E + E E T+L +G+SIRNLVK Y Sbjct: 3 FFKQLTLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKALPSAGTLPWIQGIICNINNPCFHSPTPGETPGQVGNFDNSIFCFERSKLLFCVNAFVFTADLPVEEYLRANETFSTFLLTNSSLSPVTVDQLMKSRLNFQVSYICECCKSLKNPLKPTYFANMSAALRLLSTENRTALPTESFRAFSRIMCGHPEVGGERIPSLNWYEDNDI--KSFLGKNGTEDTDLDHDNTPFCKSLIHGLESNPLSRIVWRGIKPLFIGKLLYTPNTPAVQQVMKEVNKTFEDLQILLELNEAWIEVGPRIKNYMESSVE-IQLLQDLLRRPEVAVLVNLRLQDTSWTVSRITHFLSTPSPDAPRLPGEPPTWLDIYNDINHTITTLAQITECFSLNKL----EGLETEGQLIDRALVLLEDRQLWAGVVFLLPNTSSLRVPPHVT---YKIRMDID--DVTRTNKIKDRFWDPGPAADPFNDMRYIWGGFVYIQDLVERAVSRVLTGVQQT-TGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVYEKEARLKETMRIMGLGTGTLWLSWLISSMVPFLVSAVLLIALLKWGDILPYSDATVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDHLNTTHRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDSYSFTLSIIMLYVDAFIYAIAAWYIEAVFPGEYGIPRPWYFIFQLNYWGG-----VPLEAGMPIPPAPSEQDEDHIEPEPTNLILGVSIRNLVKIY 807
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A4W3K1G7 (Uncharacterized protein OS=Callorhinchus milii OX=7868 GN=abca1 PE=4 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 8.589e-79 Identity = 226/812 (27.83%), Postives = 386/812 (47.54%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYN------KTQINWNENYSSIYAFKMFTKNLYN-VYQTLPKEKLTVNSLITWATNHKFEIDQLISNI-----------------MPIIKLLSPLIASLKEADTE-------NLTASKPIIIQ-IFKVFCGSDENDFTEFYYK--FSSISTKNVSGQTNAGS----QFMNESNVTCERNFENFFGNS---NIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLAS-------IEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNAT----FLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGN--FENEYTDLRVGISIRNLVKTY 2346 F QL +LLWKNF ++R+ L+ E+ PL + I++ VR S ++ C F K+M S G +P+I C N C+ + N + S + F + + L +Y + ++ V+ ++ N + E+ + IS I MP+++L S + S + E N+T S + Q + ++ CG E + + + K + G+ N Q+ N + C +N N I+ + + GK+ ++P++P+TR I++ + TF L L + + +RL W + N L+ + + + N T N +T Q+I + L + + C +K ++ T E I + M + +A +V D SN T + Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ ++ A I VT + + G +Q MPYPCYVDD+F+R ++ +P +AW+ SV +IK +VYEKE RLKE MR+MGL + W+GWF+S+++ L+ ++ ++L +IL +S +F L + + I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q ++ L + VAF ++ +E+ G + NLF ++ + +++++ D+VLY + WY+E+VFPGQ+G+ + WYF T++YW + N QL + E E T L++G+SI+NLVK Y Sbjct: 4 FWTQLGLLLWKNFTYRRRQTFQLLIELAWPLFLFFILISVRRSYPPYEQHECHFPNKAMPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFDKSILQDFLIDNETLSEFLYDNMALDRYKVSEIMDAGVNFE-EVRKQISTIRVLRLQSCTEIETLCLNMPLVQLTS--VKSWSDMRREVLLLSHKNMTGSPQELYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKYLLGENNTDEEPTPQYDNATTPYCNDLMKNLESNPISRMIWRAMKPLLVGKVLYTPDTPVTRRIIKEVSFTFTYLSGTDLLTKPTTSTYLSYRLAGTSWTASDIYNF-LVKYPEDAQ-----YSNGSAYTWREAYN-ETDQAIQS--------LSRAMECINWDKLEAVS---TEEKLINKSMELLDERKFWAGIVFMDV-----DSNGTEPSEHVKYKIRMDIDNVERTN--KIMDGYWDPGPRADPFEDLRYIWGGFAYLQDIVEHAIIRTVTGSRK-NTGVYVQQMPYPCYVDDLFLRVLSQSLPLFTTLAWIYSVAVIIKGVVYEKEARLKETMRIMGLNSGTLWLGWFISSLIPLLISAALLVIILKEGNILPYSNPLAIFTFLATFGMVTILQCFLISTLFSKANLAAACGGIIYFTLYLPYVLCMAWQEYITYPVKIFASLLSPVAFGFGFDYFSLYEEQGVGVQWHNLFSSPAKGDEYNITTSIVLMVFDAVLYGILTWYIEAVFPGQFGIPRPWYFPVTKSYW-------CGETVKNMKQLQCKQNGTSQIYMEEEPTHLKLGVSIQNLVKVY 779
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: W5LAQ7 (ATP binding cassette subfamily A member 1 OS=Astyanax mexicanus OX=7994 GN=ABCA1 PE=4 SV=2) HSP 1 Score: 288.5 bits (737), Expect = 1.203e-78 Identity = 238/827 (28.78%), Postives = 394/827 (47.64%), Query Frame = 1 Query: 91 TKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQI--------NWNE--------NYSSIYAFKMFTKNLYNVYQTLPKEK-LTVNSLITWATNHKFE-IDQLISNIMPIIKLLSPLIASLKE-AD--------TENLTASKPIIIQ-IFKVFCGSDE--------------NDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDW-INEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKEN-----ISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 + QL++LLWKNF ++R+ + L+ EI+ PL I I++ VR + ++ C F K+M S G +P+I C N C+ N+N+ + I + K+L + + K L N+ A F+ + +L+ MP+ L+ P +AS++ +D T N T S + Q + ++ CG E +++ + ++S + VS N + F N +N E + I+ + + GKI ++P++P T +I++ N TF+ L +R W + W E L+ L +F L T V V++F T QS + N+ + + + C L+K P++ T E I + + +A ++ D SN++ L +Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+++ I VT + G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ LLL ++L +S VVFL L + V I Q F+IS F+ ANLA+ GG+IYF LY+P+V+ + Q + + L + VAF + +E+ G + NLF + + + ++++ VD+ +Y + WY+E+VFPGQYG+ + WYF FT++YW + + I N+ A I E E T L +G+ I NLVK Y Sbjct: 4 STQLRLLLWKNFTYRRRQTLQLLIEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKAMPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDKSLDGFKELIHAVKALQNNTSGKQAVGVTFKSLGKLLE--MPLTSLMFPQLASMRSWSDLRNEILFLTRNATGSPSQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNYNSSDEEPVSVYDNTSTPFCN----NLMKNMETNPISRMIWRALKPLLMGKILYTPHTPATHKIIKEVNRTFQELGVLRDLGGMWEETRPKAWNFMEHSEEMDLLRTLLQNNVTAAFFSAQLTGTQWSVQDVISFLTKQSEDTRPHGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVS---TEEKLINDSLGLLDNRKFWAGIIFPDI-----QSNSSELPPHVNYKIRMDIDNVERTN--KIKDAYWDPGPRADPFEDLRYVWGGFSYLQDVIEQSIIRAVTGTKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGLPAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWKNLFSSPMEKDDYSLTTSIIIMYVDAFIYGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEGDQRPTPILKGRKANSGAVCI---------EEEPTHLDMGVYIENLVKVY 804
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A3Q3L2S5 (Zgc:172302 OS=Mastacembelus armatus OX=205130 PE=4 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 4.606e-78 Identity = 232/806 (28.78%), Postives = 387/806 (48.01%), Query Frame = 1 Query: 88 FTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQ---------------INWNENYSSIYAFK----MFTKNLYNVYQTLPKEK-LTVNS-----LITWATNHKFEIDQLISNIM----PIIKLLSPLIASLKEADTENLTASKPIIIQIF-KVFCGSDENDFTEF----YYKFSSISTKNVSGQTNAGSQFMNESNVT---CERNFENFFGNSN---IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNF-----QTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVEN-FIKQPM-----KSVFA--VLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 F KQL +LLWKN ++R I LI E+L PL + +I++ VR+S +K C F K++ S G +P+I C N C++ + + N ++ + F+ +F N + LP E+ L N L+T ++ +DQL+ + + + + + A+L+ TEN TA + F ++ CG E +Y+ + I K+ G+ ++ N T C+ N ++ I GK+ ++PN+P +++M+ N TFE L + + W + + N Y +++L ++N T I N I+ + L + C LNK E + E I + + + ++A V ++ +T P + T Y+IR+ + D T+ K+ D+FW P + D +Y GF+ +Q+ ++RA ++T + G +Q MPYPCYVDD+F+R + +P + +AW+ SV +IK +VYEKE RLKE MR+MGLG W+ W +S++V + ++ LL + IL +S VVF L+ + + I Q F+IS FFS ANLA+ GG+IYF LY+P+V+ + + L+T L + VAF + +E+ G + NL + + ++ML VD+ +Y AWY+E+VFPG+YG+ + WYF+F NYW + +++ + + D + E E T+L +G+SIRNLVK Y Sbjct: 3 FFKQLTLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKALPSAGTLPWIQGIICNINNPCFHSPTPGETPGQVGNFDNSIVQQSMNPANSFCFERSKLLFCVNAFVFTADLPVEEYLRANETFSTFLLTNSSLSPVTVDQLMKSRLNFQFSSLSSFANMSAALRLLSTENRTALPTESFRAFSRIMCGHPEVGGERIPSLNWYEDNDI--KSFLGKNGTEDTDLDHDNSTTPFCKSLIHGLESNPLSRIVWRGIKPLFIGKLLYTPNTPAVQQVMKEVNKTFEDLQILLELNEAWI-----EVGPRIKN---------------YMESSLLSLYRILVNLLPGEPPTWLDIYNDINHTITTLAQITECFSLNKL----EGLETEGQLIDRALVLLEDRQLWAGVVFLLPNTSSLRVPPHVT---YKIRMDID--DVTRTNKIKDRFWDPGPAADPFNDMRYIWGGFVYIQDLVERAVSRVLTGVQQT-TGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVYEKEARLKETMRIMGLGTGTLWLSWLISSMVPFLVSAVLLIALLKWGDILPYSDATVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDHLNTTHRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDSYSFTLSIIMLYVDAFIYAIAAWYIEAVFPGEYGIPRPWYFIFQLNYWG-------GYIVSSKCKNCLPSD---HIEPEPTNLILGVSIRNLVKIY 766
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: ENSAMXT00000016919.2 (pep primary_assembly:Astyanax_mexicanus-2.0:8:9912642:9956080:1 gene:ENSAMXG00000016432.2 transcript:ENSAMXT00000016919.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 288.5 bits (737), Expect = 4.557e-82 Identity = 238/827 (28.78%), Postives = 394/827 (47.64%), Query Frame = 1 Query: 91 TKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQI--------NWNE--------NYSSIYAFKMFTKNLYNVYQTLPKEK-LTVNSLITWATNHKFE-IDQLISNIMPIIKLLSPLIASLKE-AD--------TENLTASKPIIIQ-IFKVFCGSDE--------------NDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-LHFRDW-INEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKEN-----ISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 + QL++LLWKNF ++R+ + L+ EI+ PL I I++ VR + ++ C F K+M S G +P+I C N C+ N+N+ + I + K+L + + K L N+ A F+ + +L+ MP+ L+ P +AS++ +D T N T S + Q + ++ CG E +++ + ++S + VS N + F N +N E + I+ + + GKI ++P++P T +I++ N TF+ L +R W + W E L+ L +F L T V V++F T QS + N+ + + + C L+K P++ T E I + + +A ++ D SN++ L +Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+++ I VT + G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ LLL ++L +S VVFL L + V I Q F+IS F+ ANLA+ GG+IYF LY+P+V+ + Q + + L + VAF + +E+ G + NLF + + + ++++ VD+ +Y + WY+E+VFPGQYG+ + WYF FT++YW + + I N+ A I E E T L +G+ I NLVK Y Sbjct: 4 STQLRLLLWKNFTYRRRQTLQLLIEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKAMPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDKSLDGFKELIHAVKALQNNTSGKQAVGVTFKSLGKLLE--MPLTSLMFPQLASMRSWSDLRNEILFLTRNATGSPSQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNYNSSDEEPVSVYDNTSTPFCN----NLMKNMETNPISRMIWRALKPLLMGKILYTPHTPATHKIIKEVNRTFQELGVLRDLGGMWEETRPKAWNFMEHSEEMDLLRTLLQNNVTAAFFSAQLTGTQWSVQDVISFLTKQSEDTRPHGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVS---TEEKLINDSLGLLDNRKFWAGIIFPDI-----QSNSSELPPHVNYKIRMDIDNVERTN--KIKDAYWDPGPRADPFEDLRYVWGGFSYLQDVIEQSIIRAVTGTKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGLPAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWKNLFSSPMEKDDYSLTTSIIIMYVDAFIYGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEGDQRPTPILKGRKANSGAVCI---------EEEPTHLDMGVYIENLVKVY 804
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: abca1a (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:103028164]) HSP 1 Score: 254.988 bits (650), Expect = 8.302e-71 Identity = 185/636 (29.09%), Postives = 321/636 (50.47%), Query Frame = 1 Query: 559 TENLTASKPIIIQ-IFKVFCGSDENDFTEF----YYK---FSSISTKNVSGQTNAGSQFMNESNVTCE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSK---LINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSV-----FAVLVINDTFRYLT--PSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEG-NFENEYTDLRVGISIRNLVKTY 2346 T N+T S + Q + ++ CG E + +Y+ + ++ + +T S + N S C ++ E+ + I+ + + GKI ++P++P T+ I+ N TF+ L +R W R + + + NS+ L+ L + +F+ L T V + F T S + N+ + + + C L+K P+ NE E + + M+ + +A +V D + PSN ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+ I +T ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S VV+L L+ + + I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + G + L + VAF + +E+ G + NL + + + + + +++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW ++ + N + ++E E+ +DL G+ I NLVK Y Sbjct: 293 TGNVTRSPNHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHNDNETEPMSAYDNTSTPYCNNMMKSLESSPVSRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQQLGVLRDLGGMWE-EMRPKVWDFMENSEEMDLVRTLLQNNASARFFNTKLKGTEWRVEDISRFLTKVSEDTRPPGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANE----ERLVNKSMRLLDDRKFWAGIVFPDIKANASEIPSN---VNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYVWGGFSYLQDVIEHGIIRALTGSKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGVVYLFLVSFAIVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSISLMLFDALLYAVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTSAQTTNKRE-----NAEAFCIEDVPSDLEPGVYIENLVKVY 912
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: abca1a (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:103028164]) HSP 1 Score: 254.988 bits (650), Expect = 8.302e-71 Identity = 185/636 (29.09%), Postives = 321/636 (50.47%), Query Frame = 1 Query: 559 TENLTASKPIIIQ-IFKVFCGSDENDFTEF----YYK---FSSISTKNVSGQTNAGSQFMNESNVTCE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSK---LINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSV-----FAVLVINDTFRYLT--PSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEG-NFENEYTDLRVGISIRNLVKTY 2346 T N+T S + Q + ++ CG E + +Y+ + ++ + +T S + N S C ++ E+ + I+ + + GKI ++P++P T+ I+ N TF+ L +R W R + + + NS+ L+ L + +F+ L T V + F T S + N+ + + + C L+K P+ NE E + + M+ + +A +V D + PSN ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+ I +T ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S VV+L L+ + + I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + G + L + VAF + +E+ G + NL + + + + + +++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW ++ + N + ++E E+ +DL G+ I NLVK Y Sbjct: 293 TGNVTRSPNHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHNDNETEPMSAYDNTSTPYCNNMMKSLESSPVSRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQQLGVLRDLGGMWE-EMRPKVWDFMENSEEMDLVRTLLQNNASARFFNTKLKGTEWRVEDISRFLTKVSEDTRPPGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANE----ERLVNKSMRLLDDRKFWAGIVFPDIKANASEIPSN---VNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYVWGGFSYLQDVIEHGIIRALTGSKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGVVYLFLVSFAIVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSISLMLFDALLYAVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTSAQTTNKRE-----NAEAFCIEDVPSDLEPGVYIENLVKVY 912
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: abca1a (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:103028164]) HSP 1 Score: 254.603 bits (649), Expect = 9.367e-71 Identity = 185/636 (29.09%), Postives = 321/636 (50.47%), Query Frame = 1 Query: 559 TENLTASKPIIIQ-IFKVFCGSDENDFTEF----YYK---FSSISTKNVSGQTNAGSQFMNESNVTCE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSK---LINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQS--------------ILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSV-----FAVLVINDTFRYLT--PSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEG-NFENEYTDLRVGISIRNLVKTY 2346 T N+T S + Q + ++ CG E + +Y+ + ++ + +T S + N S C ++ E+ + I+ + + GKI ++P++P T+ I+ N TF+ L +R W R + + + NS+ L+ L + +F+ L T V + F T S + N+ + + + C L+K P+ NE E + + M+ + +A +V D + PSN ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I+ I +T ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N + W+ WF+S+++ L+ ++ L+L ++L +S VV+L L+ + + I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + G + L + VAF + +E+ G + NL + + + + + +++ D++LY + WY+E+VFPGQYG+ + WYF FT++YW ++ + N + ++E E+ +DL G+ I NLVK Y Sbjct: 292 TGNVTRSPNHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHNDNETEPMSAYDNTSTPYCNNMMKSLESSPVSRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQQLGVLRDLGGMWE-EMRPKVWDFMENSEEMDLVRTLLQNNASARFFNTKLKGTEWRVEDISRFLTKVSEDTRPPGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANE----ERLVNKSMRLLDDRKFWAGIVFPDIKANASEIPSN---VNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYVWGGFSYLQDVIEHGIIRALTGSKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGVVYLFLVSFAIVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSISLMLFDALLYAVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTSAQTTNKRE-----NAEAFCIEDVPSDLEPGVYIENLVKVY 911
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: abca4a (retinal-specific ATP-binding cassette transporter-like [Source:NCBI gene;Acc:103024609]) HSP 1 Score: 250.366 bits (638), Expect = 2.442e-69 Identity = 183/659 (27.77%), Postives = 328/659 (49.77%), Query Frame = 1 Query: 487 QLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEF----------YYKFSSISTKNVSGQ---TNAGSQFMNESNVTCERNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR---LHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNFQTIQSILNKISLM--------FSLLEKTLN-------CTELNKF--MPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 +L+ + ++++L PL S +L A+ ++ CG E F+ Y F I+ Q ++ + F N+ ++ E+ +++T+ ++ GKI ++P+SP R++++ AN TFE L+ +R W D+ + L + L++ S Y D L T + +LNF S + M F+L ++TL C L+KF +P +T + K +A LV DTF + T + ++IR+ + ++ T K+ D++W PR + + D +Y GF LQ+ ++ A I+ T E +G +Q MPYPCYVDD+F+ ++ P +V+AWV SV+ ++KS+V EKE RLKE ++ MG+ N V W WF+ + +V+ +++ +++ +L++S ++F+ LL + + I Q F++++FF+ ANLA+ G++YF Y+P + Q ++ + L +QVAF ++ +E+ G + N+ + +F ++M+++D+VLY +AWY++SVFPGQYG+G+ +YF +Y K H + +S + FE E + L VG+ + NLVK + G+ Sbjct: 285 RLVRMSVELVQVLQPLFQSPGNPSFSHLMAAASSLV------CGYTEGAFSRVTSFNWYEDNNYKAFLGINNSRAQAQHTYDSSTTAFCND----VMKDLESSPATRLMWNTLKPFLMGKILYAPDSPAIRQLIKNANSTFEELERLRNIIRSWEEVGPQLWDFFQSNIQLDVLRDILRN-PSVMDYMDRGLKNTGLTIRHILNFLHTGSEEERERDMVQFDWRNIFNLTDRTLRMINQYGECLVLDKFVGLPDETQLTQKALDLIAEKKFWAGLVFVDTFSWTT-KIPPHIKFKIRMDIDTVERTN--KIKDRYWDPGPRADPMDDLRYVWGGFAYLQDMVEHAVIKTHTGKE-WPLGVYLQQMPYPCYVDDLFMLTLSRCFPIFIVLAWVYSVSMMVKSVVLEKEMRLKETLKAMGVTNEVLWCAWFIDSFLVMAASTALLTAIIMGGKVLNYSNPIILFIFLLTFTTATIMQCFLMTVFFNKANLAAACSGILYFSFYLPHLACFTWQDRITKDMKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIHTSPLEGDEFSFHTSIIMMLLDTVLYAVLAWYLDSVFPGQYGIGRPFYFPIQPSYCSLK-----PHALVSSPP-----TEKVFFEAEPSGLVVGVHVENLVKVFSGS 918
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002495.1 (pep scaffold:Pmarinus_7.0:GL480265:53:27909:1 gene:ENSPMAG00000002218.1 transcript:ENSPMAT00000002495.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 221.476 bits (563), Expect = 1.001e-60 Identity = 126/371 (33.96%), Postives = 203/371 (54.72%), Query Frame = 1 Query: 1252 LSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDI--NNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 + Y+IR+ + + T K+ D++W PR + D +Y GF LQ+++++ I TN ++ VG +Q MPYPCYVDD+F+R + +P L +AW+ SV ++K +V+EKE RLKE MR+MGL S+ W+ WF+S ++ L+ ++++LL L + ++ LY ++ + Q F+IS FFS ANLA+ GG++YF Y+P+V+ + Q+ ++ + + VAF F +E+ G + N+F + + + M++ D+ +Y + Y+E+VFPGQYGV K WYF TR YWR ++ Q I E+E DL VG+SI+ LVK Y Sbjct: 5 VRYKIRMDIDSVQRTN--KIKDRYWDPGPRADPFDDLRYIWGGFAYLQDSVEQGIIRAQTNG-SLSVGVYVQQMPYPCYVDDIFLRIMNRSLPMFLTLAWMYSVAMILKEVVHEKEARLKETMRIMGLSTSMLWLSWFISILIPLLISAMLLTVLLKVREQLGNILYYSDPTIVYLYLCVFAIATVMQCFLISTFFSRANLAAATGGIVYFSFYLPYVLCVAWQNQITYSVKISTSIFSTVAFSFGSEFFSLYEEQGVGMQWENVFSSPVEGEDYTFISSIFMMLFDAFVYGLLTVYIENVFPGQYGVPKPWYFPCTRAYWRGDTMEKELYETIAQKQPQAITGVPDNIYVEDEPGDLPVGVSIQGLVKIY 372
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004117.1 (pep scaffold:Pmarinus_7.0:GL489716:190:6182:-1 gene:ENSPMAG00000003765.1 transcript:ENSPMAT00000004117.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 164.081 bits (414), Expect = 8.252e-44 Identity = 118/367 (32.15%), Postives = 196/367 (53.41%), Query Frame = 1 Query: 1258 YQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFV-VFIR--MQSDLSTGF-YYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 Y+IR +N + K ++ +W P F Y GF+ +Q+ I+RA I ++ ++ G+ +Q+ PYPCY D F+ I +MMP +VI+WV SV +I+ IV EKE RLKE M++MGL N+V W+ WF++ + L V +++++L Y +L S +++L L +Y ++ + F++S+ +S A +A+ GG++YF+ Y+P++ V IR + D T F + L + AF + +E + G + + F + +LML++DSV+Y + WY+E+V PG YG+ + WYF R+YW A Y++ G E E T L + + I L K Y Sbjct: 7 YKIR--QNSSFTEKTNEIRRAYWRPGPNSGGQYYFFY---GFVWIQDMIERAIINTFVGHDVVEPGNYVQLFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHRLKEVMKMMGLSNAV-WVAWFITGFLQLSITVAVLTVILKYGQVLMHSDIFIIWLFLTIYALATVMFCFLVSVLYSKARMAAACGGIMYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGAKYFALYEVAGVGIQWHTFRQSPVEGDDFNLSLALLMLLLDSVVYGVLTWYIEAVHPGTYGLPRPWYFPLQRSYWLGSG--------RADAWEWSGYEARG-MEKEPTHLPLVVCIERLTKVY 358
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]) HSP 1 Score: 132.88 bits (333), Expect = 7.150e-32 Identity = 108/403 (26.80%), Postives = 188/403 (46.65%), Query Frame = 1 Query: 1243 ATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVV-------FIRMQSDL-------STGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA------KENISLAHDINNSAQLII---------------DYDSEGNFENEYTDLRVGISIRNLVKTY 2346 AT L+Y +R+ + T + + D W P T +++ YYT FL + ++RA I + + +Q MPYPCY DD F+ + M P + +IAW+ ++ +K +V EKE +E+M +MG+ + H++ W L + V+L+ V +++++L S L +A++ + L + +S + +M+S F++ N+AS+ IY + + PF+ R Q L T F Y L Q C + + W FG+ D+ F + MLI+D+ +Y + WY+ +V+PG YG+ + +YFLFTR +A K + + + + ++ D E DL G+S+R+L K Y Sbjct: 2 ATHLNYTLRLSIQNVMRTDYLR--DLVWVPGP--HTNQNYMYYTHAFLS-RTMLERAAISLYIGRNISEPALQVQPMPYPCYTDDSFLHSVGLMFPILFMIAWILTIASTVKFLVQEKELCQQEYMNIMGVRPASHFLSWLLQSCVLLLLMVILLTVILKASGTLPSINWALLLALFLCFGISVLAMGYMLSACFTHTNVASLTACFIYLLSFFPFLALSSLTLKLTRWQKSLIVRCLLSPTAFSYATNLITQHCTCIPMRALVQWSNMYHSPLFGD-------DVSF--AYLCWMLIIDTAIYFILGWYIRNVYPGTYGLARPFYFLFTRISSKAHGIPGQKHGSRVIRGLQDGRKGVLRGVTECSCTSPLGAPDGSMRPQLEAVPADLTAGVSLRSLTKQY 390
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001954.1 (pep scaffold:Pmarinus_7.0:GL484253:245:9303:-1 gene:ENSPMAG00000001774.1 transcript:ENSPMAT00000001954.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 80.4925 bits (197), Expect = 7.744e-17 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 1336 PRRETLRD---FKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSS-------MQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGW 1662 PR ++D YY GFL Q ID E +T +GS+ +Q PYP Y DD+FI I +P +L++++V + +++++V+EKE +LKE+M++M L N +HW W Sbjct: 117 PRERHMKDGGTPGYYREGFLATQRFID----EAITAAAAERLGSAAPRTAVEVQRFPYPPYRDDIFILAIQTQLPLLLMLSFVYTALNIVRTLVHEKESKLKEYMKMMCLSNWLHWTAW 231
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001952.1 (pep scaffold:Pmarinus_7.0:GL484253:245:9555:-1 gene:ENSPMAG00000001774.1 transcript:ENSPMAT00000001952.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 80.4925 bits (197), Expect = 1.967e-16 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 1336 PRRETLRD---FKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSS-------MQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGW 1662 PR ++D YY GFL Q ID E +T +GS+ +Q PYP Y DD+FI I +P +L++++V + +++++V+EKE +LKE+M++M L N +HW W Sbjct: 201 PRERHMKDGGTPGYYREGFLATQRFID----EAITAAAAERLGSAAPRTAVEVQRFPYPPYRDDIFILAIQTQLPLLLMLSFVYTALNIVRTLVHEKESKLKEYMKMMCLSNWLHWTAW 315
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO46878 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNL9]) HSP 1 Score: 225.713 bits (574), Expect = 1.308e-61 Identity = 129/370 (34.86%), Postives = 213/370 (57.57%), Query Frame = 1 Query: 1252 LSYQIRIPENQIDSTKHF-KVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGN----FENEYTDLRVGISIRNLVKTY 2346 + Y+IR +D T ++ D +W P + Y GF+ LQ+ IDRA + I N + G+ Q+ PYPCY+ D F+ +I MP + +AW+ + +IKSIVYEKE+RLKE M+VMGLG +VHW+ WF+++ ++ + + + L IL S ++FL L++++ + I F+IS+FFS AN+++ GG+I+F+ Y+P+ + ++ +++ LS+ AF A N++ +E+ GA + NL+ I +F +G+ M M+++D VLY +Y+E+V PGQYG+ + WYF ++YW ++ S D+++ A D N E E + L +G+SIRNLVK Y Sbjct: 20 IKYKIR---QDVDFTPRTDRIRDWYWRPGPNGWFSKQ-GYMNFGFVFLQDMIDRALLTISFNETVFEPGTYAQMFPYPCYIRDRFVFYIGGTMPLFMTLAWIYTAAMIIKSIVYEKEKRLKEVMKVMGLGRTVHWVAWFINSASTMLITIIFLVITLKAGRILQHSDPFIIFLFLVVFMFATIMMCFLISVFFSRANVSAACGGIIFFVTYLPYTMVRWFEAFMNSSQIAAACLSSTTAFGVACNYLARYEEQGVGAQWNNLYASPIAGDEFSLGYAMGMMMIDGVLYALATFYIEAVMPGQYGIPRPWYFPLQKSYWFPQKPAS--PDMDDVA---FSPDGATNNDVAMETEPSHLSMGVSIRNLVKIY 380
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO38879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBQ0]) HSP 1 Score: 197.208 bits (500), Expect = 2.793e-52 Identity = 155/555 (27.93%), Postives = 274/555 (49.37%), Query Frame = 1 Query: 805 KIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSK-------LINELKSCKSWYFYFDNNLCE---TVNAVLNFQTIQSILNK--------------ISLMFSLLEKTLNCTELNKFMPIN--ESITVENFIKQPMKSV-FAVLVINDTFRYLTPSNA--TFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFV-VFIR---MQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGN--------FENEYTDLRVGISIRNLVKTY 2346 KI ++PN+ ++++ AN TF ++Y++ + +W L+ I A+ ++ + N +++ Y+ + + E T +A F+ I S+L K I + + + +L+ F+ ES+ F ++ + +V F + P+ ++Y+IR+ ++ D +W P+ YY GF+ LQ+ I+RA + + E I + MPYPCY D F+ I +MMP L ++W+ +V +++SIVYEKE+RLKE M++MGL N VHW+ WF+++V V+ V +++++L Y +L+FS +++L L+L+ + I F+IS FFS A LA+ GG+IYF+ YMPFV V IR + + + L + AF + +E+ EG + N+ I F + + L+ D+ LY+ + WY+E+V PG YG+ + WYF YW + + + +++ + E + +E E L +G++I NL K Y Sbjct: 65 KILYAPNNTAADDVIKDANRTFSDIEYLQDLAHDW-LNTSSQIRRALLQNETQFYLGLVSNYIRAYPDSYWELISGISEKDPTTHAPY-FKNIHSLLTKKNGGVNPIIEQLDRIDAVLKIWIEQTKAFKLDIFVGFKDEESLVRYAFNTSGVRGDDSSKIVAGIVFTNIEPNKTLPVHVTYKIRMNATYFTPATD-RIRDSYWRPGPQSWGQ---SYYDLGFVWLQDKIERAVVNLHAMREVIKPAVYLHEMPYPCYSKDRFMLVIQHMMPLCLTVSWIYTVAIVVRSIVYEKEQRLKEVMKMMGLSNVVHWVAWFITSVSVMSITVMLLTVILKYGKVLAFSDPLIIWLSLMLFAIVTIVFCFLISAFFSKAKLAAACGGIIYFLTYMPFVFVSIREGAAHATIESSEKMAISLLSTSAFGLGARYFALYEEQGEGVQWSNIGKSPIRGDDFNLLKVLYFLVFDTFLYVILVWYIEAVHPGSYGLPRPWYFPIQPTYWFGHNTNACPNLRKKNYRMMTSDEMEDSPQTPGLLAYEREPVHLPLGVTIDNLQKVY 613
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO48951 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI12]) HSP 1 Score: 153.68 bits (387), Expect = 3.467e-38 Identity = 137/446 (30.72%), Postives = 227/446 (50.90%), Query Frame = 1 Query: 1072 ISLMFSLLEKTLNCTELNKFMPINESIT-VENFIKQPM----KSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETL--RDFKYYT-SGFLLLQEAIDRAFIEIVTNNETIDVGSSMQI--MPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAIN--------FIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 +S + S + T+N +N+ M N+ T VE + + K + AV+ + + P + Y +R+P + K ++ + P + + R +YT SGF +LQ AID A I+ + M I +PYP YV D F++ + N++P +L +A++ S +IK +V+EK++RLKE M++MGL N +HW WF+ ++ L F + I+++ + I FS VVFL L Y++S I F IS+FFSN L+ + G V+++ +P+ + + ++ Y SA+ + C N I E GA F NL D F + + M+I+ S++YL + WY+ +VFPGQYG+ K +YF F ++YW +HD A L + E+E TDL +G+ I++L K + G+ Sbjct: 86 VSGLMSSVASTMNIKVVNRSMVHNKDWTSVEQMVAEVAEHEDKYLAAVVFDVEKDKLSLPK---VVKYTLRMPHSSAGERKTWRTERTY----PNFQGIGARTTNFYTFSGFAILQYAIDMAIIQ-AKASLPFPFAYPMNIKQLPYPGYVQDFFVQTVANLLPLLLTLAFIYSAVSIIKELVFEKQQRLKESMKMMGLSNWIHWSAWFIKCLLFLGFTIIIITIFVKVLKIFEFSNGIVVFLFFLCYIISMISYCFFISVFFSNPTLSMLFGSVLWYAALLPYQLLAQNEN------YDTLSQSAKASMCLLPNTCLGIGATLIARLEGFKTGASFSNLASSPSADDHFSLAWVLGMMIISSLVYLILTWYISTVFPGQYGIPKPFYFPFMKSYW-----CGFSHDDVVEAGL-ERVKNNPAIEDEPTDLAIGVQIKDLRKVFKGS 511
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO32070 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW56]) HSP 1 Score: 97.4413 bits (241), Expect = 3.332e-21 Identity = 104/339 (30.68%), Postives = 170/339 (50.15%), Query Frame = 1 Query: 1363 KYYTSGFLLLQEAIDRAFIEIVTNNETIDVGS-SMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFY--YLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA---KENISL-AHDINNSAQLIIDYDSEGNFENEYTDL--RVGISIRNLVKTYPG 2352 KY LQ +ID A ++V N V + ++Q+MP + + + I ++P +V+A+ P +T L+ ++V EK+ + KE MR+MG+ ++ +W+ WFL+ +V++ IM + + + S + V+ +V LY +S I FM+S F N A G I + F V I + S Y +L + + AF A+N + GA F NL F V +C++MLIVD +LYL +A Y+++V P +YG + YF+F ++W+ + SL AH + Y SE + E ++ R ISI NL K +PG Sbjct: 8 KYLIYNTTTLQASIDAAISKVVANLPFYIVPNITVQMMPKAQFTPSL--QGIQTIVPIYMVLAFSPYITILVINLVREKQEKHKELMRIMGMVDTAYWLSWFLTYAIVVLIACLIMVTVSVIAGFFGESNYLVLLIVFYLYGLSIIMLSFMMSPLFKNPKTA----GFIASLFTAIFAVLIIPLTGPSIPQYAKWLVSIFSPTAFAFALN---EAVEVHPGAQFSNLATKG----DFPVLNCIVMLIVDILLYLLIALYLDAVVPAEYGRRQPPYFIFQPSFWKTMFQRGGGSLEAHGVRRQLSAHEVYSSE-DVEPVAQEMHGREAISIHNLKKVFPG 332
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: abca1a (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101163147]) HSP 1 Score: 257.684 bits (657), Expect = 9.810e-72 Identity = 178/552 (32.25%), Postives = 282/552 (51.09%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNF--------------QTIQSILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA-KENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 I+ + + GKI ++P++P T+ I+ N TF+ L +R W + F +++ + + N L+S F + L T V+ V NF T + N+ + + + C L+K P+ NE E + + M + +A +V D ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I++ I VT ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N W+ WF+S+++ L+ ++ +LL ++L +S VVFL L + V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + G L L + VAF + +E+ G + NL + + + + + +++ D+VLY + WY+ESVFPGQYG+ + WYF FT++YW KEN N SA L ++E E E + G+ I NLVK Y Sbjct: 363 IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWEEMKPQFWNFMENSEEMDMVRNLLQSNVGAAF-LNAQLSGTEWRVSDVANFLSKASEDKRPAGTAYTWRDAFNESDHAIQTISRFMECVNLDKLEPVANE----ERLVNKSMSLLDNQKFWAGIVFPDIVHSDNSDLPPNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYVWGGFSYLQDVIEQGIIRAVTGSKE-KTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDPGVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVLVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYGIMTWYIESVFPGQYGIPRPWYFPFTKSYWCGEKEN------KNMSALLSKKGNAEVCIEEEPGHIEPGVYIENLVKVY 900
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: abca1a (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101163147]) HSP 1 Score: 257.684 bits (657), Expect = 1.103e-71 Identity = 178/552 (32.25%), Postives = 282/552 (51.09%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNF--------------QTIQSILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA-KENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 I+ + + GKI ++P++P T+ I+ N TF+ L +R W + F +++ + + N L+S F + L T V+ V NF T + N+ + + + C L+K P+ NE E + + M + +A +V D ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I++ I VT ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N W+ WF+S+++ L+ ++ +LL ++L +S VVFL L + V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + G L L + VAF + +E+ G + NL + + + + + +++ D+VLY + WY+ESVFPGQYG+ + WYF FT++YW KEN N SA L ++E E E + G+ I NLVK Y Sbjct: 376 IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWEEMKPQFWNFMENSEEMDMVRNLLQSNVGAAF-LNAQLSGTEWRVSDVANFLSKASEDKRPAGTAYTWRDAFNESDHAIQTISRFMECVNLDKLEPVANE----ERLVNKSMSLLDNQKFWAGIVFPDIVHSDNSDLPPNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYVWGGFSYLQDVIEQGIIRAVTGSKE-KTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDPGVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVLVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYGIMTWYIESVFPGQYGIPRPWYFPFTKSYWCGEKEN------KNMSALLSKKGNAEVCIEEEPGHIEPGVYIENLVKVY 913
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: abca1a (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101163147]) HSP 1 Score: 257.299 bits (656), Expect = 1.280e-71 Identity = 178/552 (32.25%), Postives = 282/552 (51.09%), Query Frame = 1 Query: 772 IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEW---RLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCET---VNAVLNF--------------QTIQSILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPM-----KSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRA-KENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 I+ + + GKI ++P++P T+ I+ N TF+ L +R W + F +++ + + N L+S F + L T V+ V NF T + N+ + + + C L+K P+ NE E + + M + +A +V D ++Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I++ I VT ++ G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV +IK +VYEKE RLKE MR+MGL N W+ WF+S+++ L+ ++ +LL ++L +S VVFL L + V I Q F+IS FS ANLA+ GG+IYF LY+P+V+ + Q + G L L + VAF + +E+ G + NL + + + + + +++ D+VLY + WY+ESVFPGQYG+ + WYF FT++YW KEN N SA L ++E E E + G+ I NLVK Y Sbjct: 376 IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWEEMKPQFWNFMENSEEMDMVRNLLQSNVGAAF-LNAQLSGTEWRVSDVANFLSKASEDKRPAGTAYTWRDAFNESDHAIQTISRFMECVNLDKLEPVANE----ERLVNKSMSLLDNQKFWAGIVFPDIVHSDNSDLPPNVNYKIRMDIDNVERTN--KIKDGYWDPGPRADPFEDLRYVWGGFSYLQDVIEQGIIRAVTGSKE-KTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDPGVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVLVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYGIMTWYIESVFPGQYGIPRPWYFPFTKSYWCGEKEN------KNMSALLSKKGNAEVCIEEEPGHIEPGVYIENLVKVY 913
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: ENSORLT00000025407.2 (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101163308]) HSP 1 Score: 244.202 bits (622), Expect = 3.487e-67 Identity = 186/636 (29.25%), Postives = 314/636 (49.37%), Query Frame = 1 Query: 559 TENLTASKPIIIQ-IFKVFCGSDENDFTEF----YYKFSSIST--KNVSGQTNAGSQFMNESNVTCER---NFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELK----------------SCKSWYF----YFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPI-NESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFL----SYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKEN-----ISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTY 2346 T+N T+S + Q + ++ CG E + +Y+ S+ N + + + + N S C N ++ I+ + + GKI ++P++P T++I+ N TF+ L R W R + + + +S+ +N ++ + W F +N + + + T + + N+ + + + C L+K P+ NE + + +K F ++ F + P NAT L +Y+IR+ + ++ T K+ D +W PR + D +Y GF LQ+ I++ I +T + G +Q MPYPCYVDD+F+R ++ MP + +AW+ SV+ ++KS+VYEKE RLKE MR+MGL N + W WF+S+++ L+ ++ LLL ++L +S V+FL L + V I Q F+IS F+ ANLA+ GG+IYF LY+P+V+ + Q + G + L + VAF + +E+ G + NL + + F + +L++ DS LY + WY+E+VFPGQYG+ + WYF FT++YW ++ I L N +A + E E L G+ I NLVK Y Sbjct: 297 TQNATSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDESTLYDNSSTPFCNSLVSNMDSSPMAHMIWQALKPLLLGKILYTPHTPATQKIIHEVNRTFQELGVFRDLGGMWE-EMRPKVWDFMESSQEMNMIRTMLKNNITASFLTSKLASTDWTVDTLSTFLSNQVDNSHLPESIVTWRKVFNETDQAIMSISRFMECVNLDKLEPVSNEELMINRSMKLLEDRKFWAGIV---FPDIAP-NATALPPKVNYKIRMDIDNVERTN--KIKDAYWDPGPRADPFEDMRYIWGGFTYLQDVIEQGIIRALTGTKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVSIILKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKKGNLLPYSDPGVIFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGYGAKVMASLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLQEDDFSLRTTILVMYFDSFLYGVLTWYIEAVFPGQYGIPRPWYFPFTKSYWFGDKDENSSKIPLNRRRNQTAVCV---------EEEPAHLEPGVYIENLVKVY 915
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: abca4a (retinal-specific ATP-binding cassette transporter [Source:NCBI gene;Acc:101171449]) HSP 1 Score: 232.261 bits (591), Expect = 2.652e-63 Identity = 167/589 (28.35%), Postives = 298/589 (50.59%), Query Frame = 1 Query: 685 GQTNAGSQFMNESNVT--CE---RNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWR-------LHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCE---TVNAVLNFQTIQSILNK---------------ISLMFSLLEKTLNCTELNKF--MPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGN---FENEYTDLRVGISIRNLVKTY 2346 G++ A + +++ T C R E+ +++++ + G+I ++P+SP R +++ AN TFE L+ +R W F+D I ++I ++ S + D +L + + +LNF + + ++ I + +L + +C L+KF +P +++T +A L+ + + T S + ++IR+ + ++ T KV D++W PR + + D +Y GF Q+ I+ I T E +G +Q MPYPCYVDD+F + P +V+AWV SV+ ++KSIV EKE RLKE ++ MG+ N V W WF+ + +++ +++ +++ +L++S ++FL LL + + I Q F++S+FF+ A LA+ G+IYF LY+P V I Q ++ L L +QVAF ++ +E+ G + N+ + +F + M+++D+VLY +AWY+++VFPGQYG+G+ +YF YW K+N + I++ SE + FE E +L G+ I NLVK + Sbjct: 350 GRSRAKDDYTYDNSTTPFCNDLMRELESNPATRVMWNSVKPMLMGRILYAPDSPAVRRVIKNANTTFEELERLRTMGKAWEEVAPQIWAFFQDGI-----QVEMIRDIIRNPSVMDFIDKSLEDAPFSSKHILNFLRNEPLEDRPYDVPNFDWRDVFKMIDRVIRMLNQYGDCVVLDKFVALPDEDAVTYRALNLLEDGKFWAGLIFVNMHPWTT-SVPPHIKFKIRMDIDIVERTN--KVKDRYWDPGPRADPMEDLRYVWGGFAYFQDIIEHGIIRTHTGKE-WPLGVYLQQMPYPCYVDDLFTLTLNRCFPVFMVLAWVYSVSMVVKSIVLEKELRLKETLKTMGVTNGVIWSTWFIDSFIMMGTSTALLTAIIMGGRVLNYSNPFILFLFLLTFTTATIMQCFLLSVFFNQAKLAAACCGIIYFTLYLPHVFCIAWQDRITKDMKILLSLLSQVAFGFGTEYLSRYEEQGMGLQWDNIQTSPLEGDEFSFLTSICMMVLDTVLYSVLAWYLDNVFPGQYGIGRPFYFPLLPCYWLNKKNRK-----KRILKKILEKVSEQDMSFFEAEPDNLVKGVCIENLVKVF 924
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000029534.1 (SMESG000029534.1) HSP 1 Score: 1442.94 bits (3734), Expect = 0.000e+0 Identity = 750/760 (98.68%), Postives = 755/760 (99.34%), Query Frame = 1 Query: 76 MNSIFTKQLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATNHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSAQLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 MNSIFTKQLKVLLWKNFRLKKRKPITLISEILVPLLIIIIIVPVRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWAT HKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIF TISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFS LEKTLNCTELNKF+PINESITVENFIKQP+KSVFAVLVINDTFRYLTPSNATFL+YQIRIPE+QIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMSLLLIYSSILSFSCFAVVFLVLLLYVVSFICQVFMISLFF+NANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNS LIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA Sbjct: 1 MNSIFTKQLKVLLWKNFRLKKRKPITLISEILVPLLIIIIIVPVRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATIHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSNIFGTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSFLEKTLNCTELNKFVPINESITVENFIKQPIKSVFAVLVINDTFRYLTPSNATFLNYQIRIPESQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMSLLLIYSSILSFSCFAVVFLVLLLYVVSFICQVFMISLFFNNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYWRAKENISLAHDINNSEPLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 760
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000056983.1 (SMESG000056983.1) HSP 1 Score: 679.478 bits (1752), Expect = 0.000e+0 Identity = 361/768 (47.01%), Postives = 517/768 (67.32%), Query Frame = 1 Query: 97 QLKVLLWKNFRLKKRKPITLISEXXXXXXXXXXXXXXRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATNHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFG----NSNIFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLI----NELKSC--KSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW----RAKENISLAHDINNSAQ-LIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGA 2355 Q+ +LLWKNFRL+KR+P L EIL+ L I+ ++ +R + KF++ CE +EK+MAS+G +PF+ D+ CTFNTTCYN+TQI+W +N ++ Y F N +Y + PK +LT + W H E + L +++ + + ++ S+ ++ N I ++ + CGSD+ND + + + S QT C+ +E + + + + +FGKIYF+P+S TR+I+++ANITFE LD +RL+++EWRL+FRDW++ VNNS + N K C S +Y +C+ + + IQ+ + S +F L+E+ LNCTELNKF P+ + ++N + + ++FA +V N++F+YLT +NAT L+YQIR+P N+IDSTK+FKV D FW PRR+T+ D KYYTSGFL LQEA D+AFIE+VT N TI++G+SMQIMPYPC+VDD FI+F++ +MPF+L+IAW PSVT +IKSIVYEKE RLKEFM +MGL N VHW WF+ST+VVLIFPV M+L+L Y+ I+ FS ++F+++L YV+SFICQ FMIS+FF N+N+A++ GG++YFI Y+PF+VFI Q +LST YY GL QV+FCNAINFIGY EQ+++GA F NLF+ IIDL FGVGHC++M+ +DS+ Y+ +AWYVE+VFPG+YGV K WYFLFTR+YW + +NI ++ + + + ID FE E DL +GI I NLVK +P + Sbjct: 9 QISLLLWKNFRLRKRRPFQLTFEILICLSFILSLIGIRQAQLKFRIGRCELREKNMASLGPIPFLRDYLCTFNTTCYNETQIDWKDNKTNDYL--TFLNNCTRIYNSYPKRQLTSTEFLQWLILHPEESEMLRYSLIFLNAKIDYVVESIDLINSGNSNNVSRGINKLTTMICGSDKNDAAILIFNLNLLQRSKRSIQT-------------CQEVYEKYLSVDYFHRQLLGMTAPIIFGKIYFTPDSEFTRQIIKKANITFEILDNLRLSAVEWRLNFRDWLSNQVNNSSTLDNMSNNAKVCMETSQNYY---TVCQLIYKSSDRNRIQNSIEIASRIFDLIERGLNCTELNKFQPMKSKVDIDNLAQNKLINIFAGVVFNESFQYLTLNNATVLNYQIRMPTNRIDSTKNFKVLDTFWNPIPRRDTIYDLKYYTSGFLFLQEAFDQAFIELVTGNVTINIGTSMQIMPYPCFVDDRFIKFLSMIMPFILIIAWTPSVTIIIKSIVYEKENRLKEFMLLMGLTNFVHWCSWFISTIVVLIFPVIFMTLILKYNEIIQFSSPGIIFILILSYVISFICQSFMISVFFDNSNVAAIVGGIVYFIFYLPFLVFINFQDELSTEMYYGVGLLTQVSFCNAINFIGYLEQASDGAQFSNLFNSTIIDLNFGVGHCLIMIWIDSIFYILIAWYVEAVFPGKYGVPKPWYFLFTRHYWIPFSKNNDNIEISDNFRQREENIAID-----GFEKEPDDLEIGILIENLVKKFPKS 753
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000032896.1 (SMESG000032896.1) HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0 Identity = 370/710 (52.11%), Postives = 495/710 (69.72%), Query Frame = 1 Query: 262 MASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATNHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSN----IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIV-TNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW---RAKENISLAHDINNSAQLIIDYDSEG----NFENEYTDLRVGISIRNLVKTYPGA 2355 MASMG +PF+ DF CT NTTCYNKTQI+W+ N ++ F+ F N+ +Y L K + T +I QL ++ + PL+ ++ + + N T S + I CGS END F F TN S+ S +C+ F G+S+ ++ ++ +FGKIY++P+SP TRE+++RAN TF+ LD +RL+++EWRLHF + +NNS+ IN L++ +C TVNA+L+ + I + IS +F+++E +LNCTELNKF+P+ SI ++N Q + +++A LVIN++F+YLT +NATFLSYQIR+P N+ID+T FKV D +WT PR TL DFKYYTSGF+LLQEA+D+AFIEIV TNNE+I+VGSSMQIMPYPCYV+D FI+F+++MMPF+L+IAW+PSVT L+K IVYEKE RLKEFM+VMGL N VHWIGWF++T+ +L+ P+ IM+L+L YS+IL FS AVVFL+LL YVVSFICQ FMIS+FF AN+A+VAGG+IY ILY+PF VFI + D++ YY GL QVAFCN+INFI +WEQST+G F NLFD +++L GVGHCM+M+ VDSV+YL +AWYVESVFPGQYGVGK WYFLFTR+YW A + I+L + + L I +EG FE+E T+L+VGISI+NLVKTYPGA Sbjct: 1 MASMGPIPFLRDFLCTLNTTCYNKTQIDWSGNNTN--DFQTFLNNMTYLYGVLNKP---------FPTPTPNDITQLTYSLNYLNSSTYPLLVAMMQIQSGNKTESDKGMKTIEASICGSSENDMNLFVNSFV----------TNQKSK---RSLQSCQNQFLQTLGSSSYGSQMYQVLAPLIFGKIYYTPDSPFTRELIKRANSTFKILDDLRLSAVEWRLHFSSYFVNYMNNSQPINNLRNFCKLNIPGTQQMCSTVNAILDMENILAYNAAISAVFAIIENSLNCTELNKFVPMKSSIDIDNLANQSLTNIYAGLVINESFQYLTRNNATFLSYQIRMPTNRIDTTLKFKVLDSYWTPAPRINTLTDFKYYTSGFMLLQEALDQAFIEIVSTNNESINVGSSMQIMPYPCYVNDKFIKFLSSMMPFLLIIAWMPSVTNLLKGIVYEKENRLKEFMQVMGLSNLVHWIGWFITTISILMLPIIIMTLILHYSTILDFSSPAVVFLILLSYVVSFICQSFMISVFFDKANVAAVAGGIIYSILYLPFYVFITIPDDVTDSMYYGVGLLTQVAFCNSINFIAFWEQSTDGVQFSNLFDSTVVNLNVGVGHCMVMMWVDSVIYLLIAWYVESVFPGQYGVGKPWYFLFTRHYWCQNSASDKITLIDNHYSYESLPIPNINEGILKHGFESEPTNLKVGISIKNLVKTYPGA 686
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000032861.1 (SMESG000032861.1) HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0 Identity = 371/720 (51.53%), Postives = 494/720 (68.61%), Query Frame = 1 Query: 232 MDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATNHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSN----IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIV-TNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW---RAKENISLAHDINNSAQLIIDYDSEG----NFENEYTDLRVGISIRNLVKTYPGA 2355 MD CE +EK MASMG +PF+ DF CT NTTCYNKTQI+W+ N ++ F+ F N+ +Y K + T +I QL ++ + PL+ ++ + + N T S + I CGS END F F TN S+ S +C+ F G+S+ +++ I+ +FGKIY++P+SP TRE+++RAN TF+ LD +RL+++EWRLHF + +NNS+ IN L++ +C TVN L+ + I + IS +F+++E +LNCTELNKF+P+ SI ++N Q + +++A LVIN++F+YLT +NATFLSYQIR+P N+ID+T FKV D FWT PR T DFKYYTSGF+LLQEA+D+AFIEIV TNNE+I+VGSSMQIMPYPCYV+D FI+F+++MMPF+L+IAW+PSVT L+K IVYEKE RLKEFM+VMGL N VHWIGWF++T+ +L+ P+ IM+L+L YS+IL FS AVVFL+LL YVVSFICQ FMIS+FF AN+A+VAGG+IYFI Y+PF VFI + D++ YY GL QVAF N+INFI +WEQST+G F NLFD +++L GVGHCM+M+ VDSV+YL +AWYVESVFPGQYGVGK WYFLFT++YW A I+ + I +EG FE+E T+L+VGISI+NLVKTYPGA Sbjct: 1 MDLCELREKQMASMGPIPFLRDFLCTLNTTCYNKTQIDWSGNNTN--DFQTFLNNMTYLYDVFNKP---------FPTPTPNDITQLTYSLNYLNSSTYPLLVAMMQIQSGNKTESDKGMKTIEASICGSSENDMNLFVNSFV----------TNQKSK---RSLQSCQNQFLQTLGSSSYGSQLYEVIAPLIFGKIYYTPDSPFTRELIKRANSTFKILDDLRLSAVEWRLHFSSYFVNYMNNSQPINNLRNFCKLNIPGTQQMCSTVNTTLDMENILAYNAAISAVFAIIENSLNCTELNKFVPMKSSIDIDNLANQSLTNIYAGLVINESFQYLTRNNATFLSYQIRMPTNRIDTTLKFKVIDSFWTPAPRISTFSDFKYYTSGFMLLQEALDQAFIEIVSTNNESINVGSSMQIMPYPCYVNDKFIKFLSSMMPFLLIIAWMPSVTILLKGIVYEKENRLKEFMQVMGLSNLVHWIGWFITTISILMLPIIIMTLILRYSTILGFSSPAVVFLILLSYVVSFICQSFMISVFFDKANVAAVAGGIIYFISYLPFYVFITIPDDVTDSMYYGVGLLTQVAFSNSINFIAFWEQSTDGVQFSNLFDSTVVNLNVGVGHCMVMMWVDSVIYLLIAWYVESVFPGQYGVGKPWYFLFTQHYWCQNSASYKITPIDNYYPYESSPIPNINEGILKHGFESEPTNLKVGISIKNLVKTYPGA 696
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000032896.1 (SMESG000032896.1) HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0 Identity = 367/707 (51.91%), Postives = 492/707 (69.59%), Query Frame = 1 Query: 271 MGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATNHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNSN----IFDTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKSCKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSLLEKTLNCTELNKFMPINESITVENFIKQPMKSVFAVLVINDTFRYLTPSNATFLSYQIRIPENQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIV-TNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICQVFMISLFFSNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW---RAKENISLAHDINNSAQLIIDYDSEG----NFENEYTDLRVGISIRNLVKTYPGA 2355 MG +PF+ DF CT NTTCYNKTQI+W+ N ++ F+ F N+ +Y L K + T +I QL ++ + PL+ ++ + + N T S + I CGS END F F TN S+ S +C+ F G+S+ ++ ++ +FGKIY++P+SP TRE+++RAN TF+ LD +RL+++EWRLHF + +NNS+ IN L++ +C TVNA+L+ + I + IS +F+++E +LNCTELNKF+P+ SI ++N Q + +++A LVIN++F+YLT +NATFLSYQIR+P N+ID+T FKV D +WT PR TL DFKYYTSGF+LLQEA+D+AFIEIV TNNE+I+VGSSMQIMPYPCYV+D FI+F+++MMPF+L+IAW+PSVT L+K IVYEKE RLKEFM+VMGL N VHWIGWF++T+ +L+ P+ IM+L+L YS+IL FS AVVFL+LL YVVSFICQ FMIS+FF AN+A+VAGG+IY ILY+PF VFI + D++ YY GL QVAFCN+INFI +WEQST+G F NLFD +++L GVGHCM+M+ VDSV+YL +AWYVESVFPGQYGVGK WYFLFTR+YW A + I+L + + L I +EG FE+E T+L+VGISI+NLVKTYPGA Sbjct: 1 MGPIPFLRDFLCTLNTTCYNKTQIDWSGNNTN--DFQTFLNNMTYLYGVLNKP---------FPTPTPNDITQLTYSLNYLNSSTYPLLVAMMQIQSGNKTESDKGMKTIEASICGSSENDMNLFVNSFV----------TNQKSK---RSLQSCQNQFLQTLGSSSYGSQMYQVLAPLIFGKIYYTPDSPFTRELIKRANSTFKILDDLRLSAVEWRLHFSSYFVNYMNNSQPINNLRNFCKLNIPGTQQMCSTVNAILDMENILAYNAAISAVFAIIENSLNCTELNKFVPMKSSIDIDNLANQSLTNIYAGLVINESFQYLTRNNATFLSYQIRMPTNRIDTTLKFKVLDSYWTPAPRINTLTDFKYYTSGFMLLQEALDQAFIEIVSTNNESINVGSSMQIMPYPCYVNDKFIKFLSSMMPFLLIIAWMPSVTNLLKGIVYEKENRLKEFMQVMGLSNLVHWIGWFITTISILMLPIIIMTLILHYSTILDFSSPAVVFLILLSYVVSFICQSFMISVFFDKANVAAVAGGIIYSILYLPFYVFITIPDDVTDSMYYGVGLLTQVAFCNSINFIAFWEQSTDGVQFSNLFDSTVVNLNVGVGHCMVMMWVDSVIYLLIAWYVESVFPGQYGVGKPWYFLFTRHYWCQNSASDKITLIDNHYSYESLPIPNINEGILKHGFESEPTNLKVGISIKNLVKTYPGA 683 The following BLAST results are available for this feature:
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 3
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30014020 ID=SMED30014020|Name=ATP binding cassette subfamily A member 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2356bpback to top protein sequence of SMED30014020-orf-1 >SMED30014020-orf-1 ID=SMED30014020-orf-1|Name=SMED30014020-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=760bp MNSIFTKQLKVLLWKNFRLKKRKPITLISEILVPLLIIIIIVPVRNSIFKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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