Spds-1

Overview


Name	Spds-1
Smed ID	SMED30013882
Length (bp)	976

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Spds-1 (SMED30013882) t-SNE clustered cells

Violin plots show distribution of expression levels for Spds-1 (SMED30013882) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Spds-1 (SMED30013882) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Spds-1 (SMED30013882) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30013882

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 8

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
Smed sexual biotype	SMED30013882	h1SMcG0022097	Contig35046	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30013882	h1SMcG0022097	Contig35046	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
pharynx	SMED30013882	h1SMcG0022097	dd_Smed_v4_3295_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30013882	h1SMcG0022097	dd_Smed_v4_3295_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30013882	h1SMcG0022097	dd_Smed_v4_3295_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30013882	h1SMcG0022097	dd_Smed_v4_3295_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30013882	h1SMcG0022097	dd_Smed_v4_3295_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017
dorsal region of the epidermis	SMED30013882	h1SMcG0022097	dd_Smed_v4_3295_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Spds-1 vs. Ensembl Human
Match: KBTBD2 (kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751])

HSP 1 Score: 67.781 bits (164), Expect = 4.030e-12
Identity = 56/227 (24.67%), Postives = 105/227 (46.26%), Query Frame = 1

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIK 867
            F  +  F+DI LIV+  EF CHK++L+ CS  F+AM +   +E  +  + +++ D   ++  +   Y  +   +N++  + +   A F QV  +++    Y  + ++  ++ C+  L     F+  ++KQ+     A+       TA+   +A  +   DLL        DIL +  L+       VEK+ET       V   A L L+ N E  ++ +  + S I+
Sbjct:   24 FYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAATLQIIITYAYTGNL-AMNDSTVEQLYETACFLQVEDVLQRCREYLIKKIN--AENCVRLLSFADLFSCEELKQS-----AKRMVEHKFTAVYHQDAFMQLSHDLLI-------DILSSDNLN-------VEKEET-------VREAAMLWLEYNTESRSQYLSSVLSQIR 221

[Close]

BLAST of Spds-1 vs. Ensembl Human
Match: KBTBD2 (kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751])

HSP 1 Score: 67.781 bits (164), Expect = 6.868e-12
Identity = 56/227 (24.67%), Postives = 105/227 (46.26%), Query Frame = 1

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIK 867
            F  +  F+DI LIV+  EF CHK++L+ CS  F+AM +   +E  +  + +++ D   ++  +   Y  +   +N++  + +   A F QV  +++    Y  + ++  ++ C+  L     F+  ++KQ+     A+       TA+   +A  +   DLL        DIL +  L+       VEK+ET       V   A L L+ N E  ++ +  + S I+
Sbjct:   24 FYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAATLQIIITYAYTGNL-AMNDSTVEQLYETACFLQVEDVLQRCREYLIKKIN--AENCVRLLSFADLFSCEELKQS-----AKRMVEHKFTAVYHQDAFMQLSHDLLI-------DILSSDNLN-------VEKEET-------VREAAMLWLEYNTESRSQYLSSVLSQIR 221

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BLAST of Spds-1 vs. Ensembl Human
Match: KLHL20 (kelch like family member 20 [Source:HGNC Symbol;Acc:HGNC:25056])

HSP 1 Score: 66.2402 bits (160), Expect = 2.313e-11
Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   69 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQIT-VEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 166

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BLAST of Spds-1 vs. Ensembl Human
Match: KLHL3 (kelch like family member 3 [Source:HGNC Symbol;Acc:HGNC:6354])

HSP 1 Score: 61.2326 bits (147), Expect = 6.474e-10
Identity = 27/88 (30.68%), Postives = 49/88 (55.68%), Query Frame = 1

Query:  196 KDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            K    D+ ++ ++ E   H+++L+ CSP F AM  GD +E    +IE+KD D   +   ++ IY    + V E + +++LP A+  Q+
Sbjct:    6 KQLLCDVMIVAEDVEIEAHRVVLAACSPYFCAMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIE-VTEENVQVLLPAASLLQL 92

[Close]

BLAST of Spds-1 vs. Ensembl Human
Match: KLHL3 (kelch like family member 3 [Source:HGNC Symbol;Acc:HGNC:6354])

HSP 1 Score: 61.2326 bits (147), Expect = 8.080e-10
Identity = 27/88 (30.68%), Postives = 49/88 (55.68%), Query Frame = 1

Query:  196 KDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            K    D+ ++ ++ E   H+++L+ CSP F AM  GD +E    +IE+KD D   +   ++ IY    + V E + +++LP A+  Q+
Sbjct:   46 KQLLCDVMIVAEDVEIEAHRVVLAACSPYFCAMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIE-VTEENVQVLLPAASLLQL 132

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BLAST of Spds-1 vs. Ensembl Celegans
Match: bath-30 (BTB and MATH domain containing [Source:UniProtKB/TrEMBL;Acc:Q8MXH8])

HSP 1 Score: 68.9366 bits (167), Expect = 4.938e-13
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1

Query:  196 KDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCE--MLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIM 594
            K  +SDI ++V  + F+  K  L+  S  F+++ LG F E    E+ + D D D+ + FLE +Y   F  +N+   + IL LA+ YQ   LV EL    CE  ++ T        LQM   FNL  +KQ C+ ++
Sbjct:  153 KKEYSDIVVLVDGQRFYLLKKFLAFHSTFFESLFLGGFYEAKLTEVPLYDIDVDDFQKFLEVLYG--FPVINDNTVEGILLLADMYQT-PLVSEL----CEDFLIQTTGKTYKKKLQMAIKFNLENLKQFCISMI 280

[Close]

BLAST of Spds-1 vs. Ensembl Celegans
Match: bath-13 (BTB and MATH domain containing [Source:UniProtKB/TrEMBL;Acc:O76568])

HSP 1 Score: 67.781 bits (164), Expect = 1.101e-12
Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCI-DYLQMVRNFNLPKIKQTCL 585
            FSD+ L V +KEF   K  L+  S  F+++LLG FAE  + E+ ++D DP + +  LE +Y      +++     IL LA+ Y +   +++ E    E L   S+K + D L++ + + L K+K+ CL
Sbjct:  151 FSDVVLAVGDKEFFVLKQFLAYHSSYFKSLLLGKFAESDQKEVTLQDIDPTDFQNLLEVLYGEP--AIDDETIDGILHLAHMYDMSVPLRKCE----EFLINESEKSMKDQLKIAKQYQLEKLKKACL 272

[Close]

BLAST of Spds-1 vs. Ensembl Celegans
Match: bath-29 (BTB and MATH domain containing [Source:UniProtKB/TrEMBL;Acc:H2KZR7])

HSP 1 Score: 67.3958 bits (163), Expect = 1.720e-12
Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCE--MLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIM 594
            +SDI ++V  + F+  K  L+  S  F+++ LG F E    E+ + D D D+ + FLE +Y   F  +N+   + IL LA+ YQ   LV EL    CE  ++ T        LQM   FNL  +KQ C+ ++
Sbjct:  156 YSDIVVLVNGQRFYLLKKFLAFHSTFFESLFLGGFYEAKLAEVPLYDIDVDDFQKFLEVLYG--FPVINDNTVEGILLLADMYQT-PLVSEL----CEDFLIQTTGKTYRKKLQMAIKFNLENLKQFCISMI 280

[Close]

BLAST of Spds-1 vs. Ensembl Celegans
Match: bath-1 (BTB and MATH domain containing [Source:UniProtKB/TrEMBL;Acc:Q9N5Q0])

HSP 1 Score: 65.855 bits (159), Expect = 4.895e-12
Identity = 40/131 (30.53%), Postives = 78/131 (59.54%), Query Frame = 1

Query:  196 KDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCI-DYLQMVRNFNLPKIKQTCL 585
            ++ FSD+ L V++K+F   +  L++ S  F+++LLG FAE  K+EI+ +  +  + + FLE +Y      +++ D + IL LA+ Y V   +++ E +  E    +S+K + D L++ + + L  +K++CL
Sbjct:  142 EEQFSDVVLAVEDKKFFVLRKFLASHSSYFKSLLLGTFAEADKSEIKHEAINSIDFQNFLEVLYGEP--VIDDDDVEGILHLAHMYDVPVAIRKCEEFLIE----KSEKSMRDQLEIAKKYQLDNLKKSCL 266

[Close]

BLAST of Spds-1 vs. Ensembl Celegans
Match: bath-33 (BTB and MATH domain containing [Source:UniProtKB/TrEMBL;Acc:O17193])

HSP 1 Score: 64.6994 bits (156), Expect = 9.274e-12
Identity = 34/126 (26.98%), Postives = 67/126 (53.17%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTC 582
            FSD+ L+VK   FH  K+ L+  S  F+A+ +G+F E + +E+ +   DP++ + FLE +Y    + + +   + +L +A+ Y    + +  EN+      ++       LQ+   +NL  +K++C
Sbjct:  148 FSDVVLVVKETRFHVAKLFLAAQSGYFKALPIGNFKEGNSSEVTLSSIDPNDFQNFLEVLYGHQ-EAITDESVEGVLLIADMYNAKLVTQNCENFLFRGAGSKM-MLKKQLQLAYRYNLENLKRSC 271

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BLAST of Spds-1 vs. Ensembl Fly
Match: dbo (gene:FBgn0040230 transcript:FBtr0332133)

HSP 1 Score: 55.4546 bits (132), Expect = 3.529e-8
Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L V  ++   H+++LS CS  F AM  G+  E  + E+ ++D D + ME  ++  Y      V E++ + +LP A   Q    + E+++  CE L  + D
Sbjct:   73 DVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLIDFCYTAHI-IVEESNVQTLLPAACLLQ----LVEIQDICCEFLKRQLD 170

[Close]

BLAST of Spds-1 vs. Ensembl Fly
Match: dbo (gene:FBgn0040230 transcript:FBtr0075505)

HSP 1 Score: 55.0694 bits (131), Expect = 3.867e-8
Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L V  ++   H+++LS CS  F AM  G+  E  + E+ ++D D + ME  ++  Y      V E++ + +LP A   Q    + E+++  CE L  + D
Sbjct:   73 DVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLIDFCYTAHI-IVEESNVQTLLPAACLLQ----LVEIQDICCEFLKRQLD 170

[Close]

BLAST of Spds-1 vs. Ensembl Fly
Match: kel (gene:FBgn0001301 transcript:FBtr0081042)

HSP 1 Score: 55.0694 bits (131), Expect = 4.053e-8
Identity = 29/103 (28.16%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+  + E H H+++L++CSP F AM    F E  +  I ++  D   +E  ++ +Y  + + VNE + +++L  AN  Q    + ++ +  C+ L T+ D
Sbjct:  158 DVILVADDVEIHAHRMVLASCSPYFYAMFT-SFEESRQARITLQSVDARALELLIDYVYTATVE-VNEDNVQVLLTAANLLQ----LTDVRDACCDFLQTQLD 254

[Close]

BLAST of Spds-1 vs. Ensembl Fly
Match: kel (gene:FBgn0001301 transcript:FBtr0081043)

HSP 1 Score: 55.4546 bits (132), Expect = 4.142e-8
Identity = 29/103 (28.16%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+  + E H H+++L++CSP F AM    F E  +  I ++  D   +E  ++ +Y  + + VNE + +++L  AN  Q    + ++ +  C+ L T+ D
Sbjct:  158 DVILVADDVEIHAHRMVLASCSPYFYAMFT-SFEESRQARITLQSVDARALELLIDYVYTATVE-VNEDNVQVLLTAANLLQ----LTDVRDACCDFLQTQLD 254

[Close]

BLAST of Spds-1 vs. Ensembl Fly
Match: CG17068 (gene:FBgn0031098 transcript:FBtr0077341)

HSP 1 Score: 53.9138 bits (128), Expect = 1.238e-7
Identity = 38/147 (25.85%), Postives = 76/147 (51.70%), Query Frame = 1

Query:  181 GKFLV-KDPFSDIKLIVKN----KEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGT 606
            G++L+  + ++D + +V +    +    HK++L+  SPVF+ M  G+  +K+ + I + D  P+  EA LE IY       +   A  +  +A  Y + H+V    ++    LS + + C  Y +  + F+ P++ Q+ +D++A  T
Sbjct:   16 GQYLLHSEKWADCRFLVGSSPTQRLIAGHKLLLAMASPVFERMFYGNLPDKT-DPIVIPDVQPEAFEAMLEYIYTDRITIGSFDKACELCYVAKKYMLPHVVTRCTHFLWADLSPK-NACRAY-EFAKLFDEPRLMQSSMDLIAANT 159

[Close]

BLAST of Spds-1 vs. Ensembl Zebrafish
Match: klhl40a (kelch-like family member 40a [Source:NCBI gene;Acc:553257])

HSP 1 Score: 68.9366 bits (167), Expect = 2.017e-12
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNE 642
            F D  L +K+KEF CH+++L+  SP F+AM L D  E  K EI +KD +P  M   L  IY      + E + + I   AN YQ+  +     +Y  + L   +  C+   ++    + P++     D +      RYL  I+D +
Sbjct:   33 FVDCILKIKDKEFPCHRLVLAATSPYFKAMFLSDLEESKKREIVLKDIEPGVMGMILRYIYTSDIN-LTEQNVQDIFMAANMYQIPSIFSVCVSYLQQKLVLSN--CLAIFRLGLLLDCPRLAMEARDFIC----DRYLLIIRDQD 171

[Close]

BLAST of Spds-1 vs. Ensembl Zebrafish
Match: klhl20 (kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935])

HSP 1 Score: 67.3958 bits (163), Expect = 5.130e-12
Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKC----IDYLQMVR 549
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y  S   V E + + +LP A   Q    + E++   CE L  + D      I  LQ VR
Sbjct:   51 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYT-SQVTVEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLDPSNCLGIRVLQHVR 162

[Close]

BLAST of Spds-1 vs. Ensembl Zebrafish
Match: klhl20 (kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935])

HSP 1 Score: 66.2402 bits (160), Expect = 1.436e-11
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y  S   V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   51 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYT-SQVTVEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 148

[Close]

BLAST of Spds-1 vs. Ensembl Zebrafish
Match: klhl17 (kelch-like family member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8131])

HSP 1 Score: 63.1586 bits (152), Expect = 1.587e-10
Identity = 28/83 (33.73%), Postives = 45/83 (54.22%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            DI L V NKE   HK++L++CSP F AM   + +E  +  + + D DP  +E  ++  Y      V E + + +LP A+  Q+
Sbjct:   69 DIVLHVANKEIKAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALEQLVQYAYTAEI-VVGEGNVQTLLPAASLLQL 150

[Close]

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            DI L V NKE   HK++L++CSP F AM   + +E  +  + + D DP  +E  ++  Y      V E + + +LP A+  Q+
Sbjct:   69 DIVLHVANKEIKAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALEQLVQYAYTAEI-VVGEGNVQTLLPAASLLQL 150

[Close]

BLAST of Spds-1 vs. Ensembl Xenopus
Match: klhl40 (kelch like family member 40 [Source:NCBI gene;Acc:548534])

HSP 1 Score: 69.707 bits (169), Expect = 1.340e-12
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1

Query:  199 DPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            D F D  L ++ KEF CH+++L+ CSP F+AM L +  E  K EI+++D DPD M   L  IY    + + E + + I  +AN +Q+
Sbjct:   30 DNFIDCVLKIQGKEFPCHRLVLAACSPYFRAMFLSNLEEGKKKEIDLEDVDPDVMGKILHYIYTSEIE-ITEKNVQDIFSVANMFQI 115

[Close]

BLAST of Spds-1 vs. Ensembl Xenopus
Match: usb1 (U6 snRNA biogenesis phosphodiesterase 1 [Source:Xenbase;Acc:XB-GENE-948670])

HSP 1 Score: 66.2402 bits (160), Expect = 3.583e-12
Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q+     E++   CE L  + D
Sbjct:   69 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFSYTSQIT-VEEGNVQTLLPAACLLQLA----EIQEACCEFLKRQLD 166

[Close]

BLAST of Spds-1 vs. Ensembl Xenopus
Match: usb1 (U6 snRNA biogenesis phosphodiesterase 1 [Source:Xenbase;Acc:XB-GENE-948670])

HSP 1 Score: 67.0106 bits (162), Expect = 9.781e-12
Identity = 38/117 (32.48%), Postives = 60/117 (51.28%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKC----IDYLQMVR 549
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q    + E++   CE L  + D      I  LQ VR
Sbjct:   51 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFSYTSQIT-VEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLDPSNCLGIRVLQHVR 162

[Close]

BLAST of Spds-1 vs. Ensembl Xenopus
Match: klhl30 (kelch like family member 30 [Source:NCBI gene;Acc:100124817])

HSP 1 Score: 65.855 bits (159), Expect = 2.226e-11
Identity = 32/130 (24.62%), Postives = 63/130 (48.46%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIM 594
             SD+ L+V+ +EF CH+ +L+ CS  F AM  GDF E    ++E+K+ DP+ ME  ++  Y      +N+++ + ++  +N      + K    Y  + +   +  C+   +       P++    L  +
Sbjct:   55 LSDVVLVVQGREFPCHRAVLALCSQYFHAMFTGDFQESIAAQVEIKEVDPEVMETLIDFSYTGRLT-INQSNVESLIRTSNLLSFPAVRKVCSRYLQQQMD--ATNCLGIWEFGETHGCPEVAAKALSFL 181

[Close]

BLAST of Spds-1 vs. Ensembl Xenopus
Match: usb1 (U6 snRNA biogenesis phosphodiesterase 1 [Source:Xenbase;Acc:XB-GENE-948670])

HSP 1 Score: 65.855 bits (159), Expect = 2.591e-11
Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   62 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFSYTSQIT-VEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 159

[Close]

BLAST of Spds-1 vs. Ensembl Mouse
Match: Kbtbd2 (kelch repeat and BTB (POZ) domain containing 2 [Source:MGI Symbol;Acc:MGI:2384811])

HSP 1 Score: 70.0922 bits (170), Expect = 9.084e-13
Identity = 58/227 (25.55%), Postives = 105/227 (46.26%), Query Frame = 1

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIK 867
            F  +  F+DI LIV+  EF CHK++L+ CS  F+AM +   +E  +  + +++ D   ++  +   Y  +   VN++  + +   A F QV  +++    Y  + ++  ++ C+  L     F+  ++KQ+     A+       TA+   EA  +   DLL        DIL +  L+       VEK+ET       V   A L L+ N E  ++ +  + S I+
Sbjct:   24 FYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAAALQMIIAYAYTGNL-AVNDSTVEQLYETACFLQVEDVLQRCREYLIKKIN--AENCVRLLSFADLFSCEELKQS-----AKRMVEHKFTAVYRQEAFMQLSHDLLI-------DILSSDNLN-------VEKEET-------VREAAMLWLEYNTESRSQYLSSVLSQIR 221

[Close]

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIK 867
            F  +  F+DI LIV+  EF CHK++L+ CS  F+AM +   +E  +  + +++ D   ++  +   Y  +   VN++  + +   A F QV  +++    Y  + ++  ++ C+  L     F+  ++KQ+     A+       TA+   EA  +   DLL        DIL +  L+       VEK+ET       V   A L L+ N E  ++ +  + S I+
Sbjct:   24 FYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAAALQMIIAYAYTGNL-AVNDSTVEQLYETACFLQVEDVLQRCREYLIKKIN--AENCVRLLSFADLFSCEELKQS-----AKRMVEHKFTAVYRQEAFMQLSHDLLI-------DILSSDNLN-------VEKEET-------VREAAMLWLEYNTESRSQYLSSVLSQIR 221

[Close]

BLAST of Spds-1 vs. Ensembl Mouse
Match: Klhl20 (kelch-like 20 [Source:MGI Symbol;Acc:MGI:2444855])

HSP 1 Score: 66.2402 bits (160), Expect = 1.405e-11
Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   64 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQIT-VEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 161

[Close]

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   64 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQIT-VEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 161

[Close]

BLAST of Spds-1 vs. Ensembl Mouse
Match: Klhl6 (kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922])

HSP 1 Score: 63.5438 bits (153), Expect = 1.015e-10
Identity = 49/200 (24.50%), Postives = 87/200 (43.50%), Query Frame = 1

Query:   91 IKMKAVKKDVCIQFGVEEIPEEEAVPTARDGKFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRN 690
            +K    +  + +Q G+E + EE A+              +D+ L V  +EF CH+++L+  S  F+AM   D  EK +  I +K  D + M   L   Y  S   + + + + +L  AN +Q   LV    ++  E L+   + CI  L++    +L  +K      + +         I ++E   E   D L H +R+
Sbjct:   45 VKFDDTRLSLILQNGLETLREENAL--------------TDVILCVDVQEFSCHRVVLAAASNYFRAMFCNDLKEKYEKRIIIKGVDAETMHTLLVYTYT-SKALITKQNVQRVLEAANLFQFLQLVDACASFLTEALN--PENCIGILRLADTHSLDSLKMQVQSYIIQN-----FVQILNSEEFLELPVDTLYHILRS 222

[Close]

BLAST of Spds-1 vs. UniProt/SwissProt
Match: sp|Q5U504|KLH40_XENLA (Kelch-like protein 40 OS=Xenopus laevis OX=8355 GN=klhl40 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.892e-12
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            F D  L ++ KEF CH+++L++CSP F+AM L D  E  K EI+++D DPD M   L  IY    + + E + + I  +AN +Q+
Sbjct:   32 FIDCVLKIQGKEFPCHRLVLASCSPYFRAMFLSDLEESKKKEIDLEDVDPDVMGKILHYIYTSEIE-ITEKNVQDIFSVANMFQI 115

[Close]

BLAST of Spds-1 vs. UniProt/SwissProt
Match: sp|Q5EB39|KLH40_XENTR (Kelch-like protein 40 OS=Xenopus tropicalis OX=8364 GN=klhl40 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.100e-12
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1

Query:  199 DPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            D F D  L ++ KEF CH+++L+ CSP F+AM L +  E  K EI+++D DPD M   L  IY    + + E + + I  +AN +Q+
Sbjct:   30 DNFIDCVLKIQGKEFPCHRLVLAACSPYFRAMFLSNLEEGKKKEIDLEDVDPDVMGKILHYIYTSEIE-ITEKNVQDIFSVANMFQI 115

[Close]

BLAST of Spds-1 vs. UniProt/SwissProt
Match: sp|B3DIV9|KL40A_DANRE (Kelch-like protein 40a OS=Danio rerio OX=7955 GN=klhl40a PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.523e-11
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNE 642
            F D  L +K+KEF CH+++L+  SP F+AM L D  E  K EI +KD +P  M   L  IY      + E + + I   AN YQ+  +     +Y  + L   +  C+   ++    + P++     D +      RYL  I+D +
Sbjct:   33 FVDCILKIKDKEFPCHRLVLAATSPYFKAMFLSDLEESKKREIVLKDIEPGVMGMILRYIYTSDIN-LTEQNVQDIFMAANMYQIPSIFSVCVSYLQQKLVLSN--CLAIFRLGLLLDCPRLAMEARDFIC----DRYLLIIRDQD 171

[Close]

BLAST of Spds-1 vs. UniProt/SwissProt
Match: sp|Q5RDY3|KBTB2_PONAB (Kelch repeat and BTB domain-containing protein 2 OS=Pongo abelii OX=9601 GN=KBTBD2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.094e-11
Identity = 56/228 (24.56%), Postives = 106/228 (46.49%), Query Frame = 1

Query:  184 KFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIK 867
            +F  +  F+DI LIV+  EF CHK++L+ CS  F+AM +   +E  +  + +++ D   ++  +   Y  +   +N++  + +   A F QV  +++    Y  + ++  ++ C+  L     F+  ++KQ+     A+       TA+   +A  +   DLL        DIL +  L+       VEK+ET       V   A L L+ N E  ++ +  + S I+
Sbjct:   23 QFYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAATLQIIITYAYTGNL-AMNDSTVEQLYETACFLQVEDVLQRCREYLIKKIN--AENCVRLLSFADLFSCEELKQS-----AKRMVEHKFTAVYHQDAFMQLSHDLLI-------DILSSDNLN-------VEKEET-------VREAAMLWLEYNTESRSQYLSSVLSQIR 221

[Close]

BLAST of Spds-1 vs. UniProt/SwissProt
Match: sp|Q8IY47|KBTB2_HUMAN (Kelch repeat and BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=KBTBD2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.298e-11
Identity = 56/227 (24.67%), Postives = 105/227 (46.26%), Query Frame = 1

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIK 867
            F  +  F+DI LIV+  EF CHK++L+ CS  F+AM +   +E  +  + +++ D   ++  +   Y  +   +N++  + +   A F QV  +++    Y  + ++  ++ C+  L     F+  ++KQ+     A+       TA+   +A  +   DLL        DIL +  L+       VEK+ET       V   A L L+ N E  ++ +  + S I+
Sbjct:   24 FYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAATLQIIITYAYTGNL-AMNDSTVEQLYETACFLQVEDVLQRCREYLIKKIN--AENCVRLLSFADLFSCEELKQS-----AKRMVEHKFTAVYHQDAFMQLSHDLLI-------DILSSDNLN-------VEKEET-------VREAAMLWLEYNTESRSQYLSSVLSQIR 221

[Close]

BLAST of Spds-1 vs. TrEMBL
Match: A0A0X3PP33 (BTB domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR85097 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.111e-22
Identity = 61/204 (29.90%), Postives = 103/204 (50.49%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVN-EADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLK 813
            FSD+ L+V+N+  HCH+ +LS  SPVF+ M    F E SKN++ +   DP+ +   L  +Y P  + ++  A A+ +LPL + YQ+  LV   E      L+         L +   + L ++KQ  +D  +R    R      + +   +    +   R++ LE  +  I+ S +  C ++E +  RVPVN C +H  PL++K
Sbjct:   48 FSDMVLVVQNERLHCHRAILSLYSPVFKTMFQSKFEETSKNQVSMPQDDPELVRELLRHLYTPGGREMDIGAAAERLLPLIHRYQIDSLVSTAERTLTYSLT--DSLAPKMLSLADLYGLERLKQAAIDSCSRLDMPRLSAYFDEAQISSDLRAIVFAERIKLLEKYVTEIQNSFTRSCVRLESRLERVPVNHCQEHSQPLSMK 249

[Close]

BLAST of Spds-1 vs. TrEMBL
Match: C1LKZ0 (Speckle-type POZ protein-like OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.065e-21
Identity = 63/216 (29.17%), Postives = 107/216 (49.54%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKL 852
            FSD  L+V+ +  HCH+ +LS  SPVF+AM      E  KNE+ +   + +++   L  +Y P    +    A+ +LP+ + YQ+  LV   E      L+  +     +L++   + L +++Q  LD  AR    R L A ++     E + ++L  R++ LE  L +I+ S ++ CS++E +  RVP N C  H  P +      V N    +L
Sbjct:   21 FSDAILVVQGRNLHCHRAILSIYSPVFKAMFQNRCIENQKNEVVIPVDEFEDIREMLRHMYTPGGCDMTAETAEKLLPILHRYQIDSLVSLAERTLTFRLNDATAPV--FLRIADLYGLSRLRQAALDSCARLDYGRMLKAFEEINISPELKNEVLERRIKVLEKCLIDIQQSFTHSCSRMESRAERVPSNHCSLHSRPFSTITFNPVVNSTTGQL 234

[Close]

BLAST of Spds-1 vs. TrEMBL
Match: C1L740 (Speckle-type POZ protein-like OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 8.262e-21
Identity = 63/216 (29.17%), Postives = 107/216 (49.54%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKL 852
            FSD  L+V+ +  HCH+ +LS  SPVF+AM      E  KNE+ +   + +++   L  +Y P    +    A+ +LP+ + YQ+  LV   E      L+  +     +L++   + L +++Q  LD  AR    R L A ++     E + ++L  R++ LE  L +I+ S ++ CS++E +  RVP N C  H  P +      V N    +L
Sbjct:   51 FSDAILVVQGRNLHCHRAILSIYSPVFKAMFQNRCIENQKNEVVIPVDEFEDIREMLRHMYTPGGCDMTAETAEKLLPILHRYQIDSLVSLAERTLTFRLNDATAPV--FLRIADLYGLSRLRQAALDSCARLDYGRMLKAFEEINISPELKNEVLERRIKVLEKCLIDIQQSFTHSCSRMESRAERVPSNHCSLHSRPFSTITFNPVVNSTTGQL 264

[Close]

BLAST of Spds-1 vs. TrEMBL
Match: C1LKY9 (Speckle-type POZ protein-like OS=Schistosoma japonicum OX=6182 GN=EWB00_008034 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.370e-20
Identity = 63/216 (29.17%), Postives = 107/216 (49.54%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKL 852
            FSD  L+V+ +  HCH+ +LS  SPVF+AM      E  KNE+ +   + +++   L  +Y P    +    A+ +LP+ + YQ+  LV   E      L+  +     +L++   + L +++Q  LD  AR    R L A ++     E + ++L  R++ LE  L +I+ S ++ CS++E +  RVP N C  H  P +      V N    +L
Sbjct:   51 FSDAILVVQGRNLHCHRAILSIYSPVFKAMFQNRCIENQKNEVVIPVDEFEDIREMLRHMYTPGGCDMTAETAEKLLPILHRYQIDSLVSLAERTLTFRLNDATAPV--FLRIADLYGLSRLRQAALDSCARLDYGRMLKAFEEINISPELKNEVLERRIKVLEKCLIDIQQSFTHSCSRMESRAERVPSNHCSLHSRPFSTITFNPVVNSTTGQL 264

[Close]

BLAST of Spds-1 vs. TrEMBL
Match: Q5DG89 (SJCHGC09428 protein OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.397e-20
Identity = 63/216 (29.17%), Postives = 107/216 (49.54%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKL 852
            FSD  L+V+ +  HCH+ +LS  SPVF+AM      E  KNE+ +   + +++   L  +Y P    +    A+ +LP+ + YQ+  LV   E      L+  +     +L++   + L +++Q  LD  AR    R L A ++     E + ++L  R++ LE  L +I+ S ++ CS++E +  RVP N C  H  P +      V N    +L
Sbjct:   51 FSDAILVVQGRNLHCHRAILSIYSPVFKAMFQNRCIENQKNEVVIPVDEFEDIREMLRHMYTPGGCDMTAETAEKLLPILHRYQIDSLVSLAERTLTFRLNDATAPV--FLRIADLYGLSRLRQAALDSCARLDYGRMLKAFEEINISPELKNEVLERRIKVLEKCLIDIQQSFTHSCSRMESRAERVPSNHCSLHSRPFSTITFNPVVNSTTGQL 264

[Close]

BLAST of Spds-1 vs. Ensembl Cavefish
Match: klhl20 (kelch like family member 20 [Source:NCBI gene;Acc:103022090])

HSP 1 Score: 66.2402 bits (160), Expect = 1.206e-11
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y  S   V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   51 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYT-SQVTVEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 148

[Close]

BLAST of Spds-1 vs. Ensembl Cavefish
Match: klhl20 (kelch like family member 20 [Source:NCBI gene;Acc:103022090])

HSP 1 Score: 66.2402 bits (160), Expect = 1.225e-11
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y  S   V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   60 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYT-SQVTVEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 157

[Close]

BLAST of Spds-1 vs. Ensembl Cavefish
Match: klhl40a (kelch-like protein 40a [Source:NCBI gene;Acc:103032700])

HSP 1 Score: 64.6994 bits (156), Expect = 4.102e-11
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1

Query:  175 RDG--KFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            +DG  + L  D F D  L +K++EF CH+++L+  SP F+AM L D  E  K E+ ++D +P  M   L  IY      + E + + I  +AN YQ+
Sbjct:   21 QDGLCELLENDKFVDCVLKIKDREFPCHRLVLAASSPYFKAMFLSDMEESKKREVVLQDVEPSIMGMILRYIYTSDIN-LTEQNVQDIFMVANMYQI 116

[Close]

BLAST of Spds-1 vs. Ensembl Cavefish
Match: kbtbd2 (kelch repeat and BTB domain containing 2 [Source:NCBI gene;Acc:103038199])

HSP 1 Score: 63.5438 bits (153), Expect = 9.832e-11
Identity = 35/143 (24.48%), Postives = 76/143 (53.15%), Query Frame = 1

Query:  154 EEAVPTARDGKFLVKDPF-SDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQT 579
            E AV      KF  +    +DI L+V++ EF CHK++L+ CS  F+AM +   +E  ++ + +++ DP  ++  +   Y  +   ++++  + +   A F QV  ++ +  +Y  + ++  +D C+  L +   F+  ++KQ+
Sbjct:   14 EYAVSVLEQLKFFYEQKLLTDITLLVEDNEFPCHKMILATCSSYFRAMFMSGLSESKQSHVHLRNVDPVTLQTIITYAYTGNLA-ISDSTVEPLYETACFLQVEDVLLQCRDYLVKKIT--ADNCVRMLSIGDMFSCNELKQS 153

[Close]

BLAST of Spds-1 vs. Ensembl Cavefish
Match: klhl17 (kelch like family member 17 [Source:NCBI gene;Acc:103036751])

HSP 1 Score: 62.7734 bits (151), Expect = 1.620e-10
Identity = 28/83 (33.73%), Postives = 45/83 (54.22%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            DI L V NKE   HK++L++CSP F AM   + +E  +  + + D DP  +E  ++  Y      V E + + +LP A+  Q+
Sbjct:   42 DIVLHVANKEIKAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALEQLVQYAYTAEI-VVGEGNVQTLLPAASLLQL 123

[Close]

BLAST of Spds-1 vs. Ensembl Sea Lamprey
Match: klhl20 (kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935])

HSP 1 Score: 65.4698 bits (158), Expect = 4.423e-12
Identity = 32/103 (31.07%), Postives = 55/103 (53.40%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L V +++ + H+++LS CSP F AM  G+ AE  + E+ ++D D   ME  ++  Y      V E + + +LP A   Q    + E+++  CE L  + D
Sbjct:   62 DVVLAVGSRKIYAHRVVLSACSPYFHAMFTGELAESRQTEVSIRDVDETAMELLIDFAYTAQIT-VEECNVQALLPAACLLQ----LAEIQDTCCEFLKRQLD 159

[Close]

BLAST of Spds-1 vs. Ensembl Sea Lamprey
Match: klhl26 (kelch-like family member 26 [Source:NCBI gene;Acc:558035])

HSP 1 Score: 60.8474 bits (146), Expect = 1.183e-10
Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIY----NPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQT 579
            D+ L+V+N  F  H+ +L+ CS  F+AM  G   E S+ EIE++      ++  L+  Y        +CV +     +L  A F Q+  +V   E++    +S   + C+   QM   F+L  +K++
Sbjct:   61 DVTLLVENASFRVHRAVLAACSDYFRAMFTGGMREASQREIELQGLSARGLQHILDFAYCGEVTLDLECVED-----VLGAAVFLQMAPVVGLCEDFLKSAMSV--ETCLGVGQMATAFSLASLKES 180

[Close]

BLAST of Spds-1 vs. Ensembl Sea Lamprey
Match: klhl2 (kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-090312-193])

HSP 1 Score: 57.7658 bits (138), Expect = 1.184e-9
Identity = 28/101 (27.72%), Postives = 53/101 (52.48%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTR 513
            D+ L+    E   HK+ L++CSP F AM   + AE    ++E+K+ D   +   ++ +Y    + V E + +++LP A+  Q    + E+ +  CE L ++
Sbjct:   21 DVVLVADGTEVAAHKLALASCSPYFHAMFTSEMAESKAQKVEIKEVDGRALALLVDYVYTAEIQ-VTEDNVQILLPAASLLQ----LPEVRDACCEFLQSQ 116

[Close]

BLAST of Spds-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002701.1 (pep scaffold:Pmarinus_7.0:GL481646:340:4542:-1 gene:ENSPMAG00000002468.1 transcript:ENSPMAT00000002701.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.299 bits (129), Expect = 2.354e-9
Identity = 31/105 (29.52%), Postives = 52/105 (49.52%), Query Frame = 1

Query:  148 PEEEAVPTARDGKFLVKDP-FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            P  E V  A + +F +KD  F+D+ + V+  EF CH+ +LS CS  F+AM   D  E     +E+       ME  L+ +Y    +   + + + +   A+ +QV
Sbjct:   52 PHAEGVLAALN-EFRLKDRIFTDVMVAVEGCEFPCHRAVLSACSAYFRAMFCNDHRESRATIVEINGIQASAMEQLLQYMYTGRARITTD-NVQYLFETASLFQV 154

[Close]

BLAST of Spds-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007942.1 (pep scaffold:Pmarinus_7.0:GL477137:5731:11302:-1 gene:ENSPMAG00000007181.1 transcript:ENSPMAT00000007942.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.8398 bits (133), Expect = 5.499e-9
Identity = 32/128 (25.00%), Postives = 66/128 (51.56%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIM 594
            D  + VK++EF+ HK +L +CSP F+A+  G +++  + +  +   +P+ ME  +E  Y  +   V  A+ + +L  A+ + V  +V+    +  E +S   D C++  +    + L  ++Q+    M
Sbjct:   24 DAVIRVKDREFNAHKNILCSCSPYFRALFTGSWSDAGRRKFTIPGVEPEAMELIIEYAYMRTLP-VTCANVERLLVAADQFNVMGIVRLCCAFLREHISF--DSCVEVYRFSGFYALHDLQQSAFAFM 148

[Close]

BLAST of Spds-1 vs. Ensembl Nematostella
Match: EDO36075 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJN5])

HSP 1 Score: 68.9366 bits (167), Expect = 1.668e-13
Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMAR 600
            +SD+ L+V+ + FH H+ +L+ CSPVF+AM    F E S  EI +     D +  FL  +Y    +     D   +L LA  YQ+  L    E    +  S+     +D + + + FNL K+   CL  ++R
Sbjct:   10 YSDLVLVVEEERFHVHRAILAMCSPVFRAMFQSKFKEASLEEIPLPGKKADRIYDFLCMLYPFPIQIAEHHDVSSLLELAREYQIPKLTARCEERLLQKQSS-----VDLILLAQEFNLTKLLDKCLVSLSR 136

[Close]

BLAST of Spds-1 vs. Ensembl Nematostella
Match: EDO30051 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T1W2])

HSP 1 Score: 63.5438 bits (153), Expect = 1.127e-11
Identity = 56/201 (27.86%), Postives = 89/201 (44.28%), Query Frame = 1

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMA-------RGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRV 768
            F V    SD  L+V+ K F+ HK  LS  SPVF+ M    F E++  EI +       ++  L  IY P+ K V E +   +L LA  YQ+  L +  E Y  +   T   + ID+L +   F + ++ + C++I         R      L    + + L E   +LL  +V  LE    +I   +   C    ++ +RV
Sbjct:   10 FSVPWHLSDAVLVVEEKHFNVHKSTLSMWSPVFEKM----FRERNDQEICLPGKKSKEIKEMLLVIY-PTSKKVTEENCYYLLTLAQEYQMEQLTERCEKYLIQREKT-PFQAIDFLVLAHGFKMSELCKQCIEIAKHISLNELRKHEKYSLVEDGNGKQLAERRVELLEGKVATLEQKPNSIRKEIKETCEWAIREISRV 204

[Close]

BLAST of Spds-1 vs. Ensembl Nematostella
Match: EDO44601 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV90])

HSP 1 Score: 58.9214 bits (141), Expect = 1.540e-10
Identity = 34/113 (30.09%), Postives = 57/113 (50.44%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVR 549
            D+ L V N+ F  HK++L+  S  F+AM    F E SKN++ + D DP  + A +   YN   + +N  +   +  +AN + V  ++   ENY    LS  +  C+ +  +V 
Sbjct:   34 DVTLKVTNQSFPGHKLVLAANSTYFRAMFGEGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIE-INADNFGAVFAVANMWDVKFVLTACENYLRVHLS--ASNCLGFQILVH 143

[Close]

BLAST of Spds-1 vs. Ensembl Nematostella
Match: EDO47648 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLR1])

HSP 1 Score: 58.5362 bits (140), Expect = 1.609e-9
Identity = 49/179 (27.37%), Postives = 82/179 (45.81%), Query Frame = 1

Query:  205 FSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYN-PSFKCVNEADAKLILPLANFYQ---VGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGT-NSRY--LTAIKDNEALK----EFETDLLRHRVRNLEDILK 708
            FSD+ L+++  +FH H+  LS  SPVF+ M    F EK+  EI +       +E  L  +Y     + + E +   +L LA  YQ   V  L  E  NY     + +   C+ + ++  +F L        ++MAR    SRY  L  ++D E  +    E +  +   +++ LE  L+
Sbjct:  429 FSDVVLVIEGTKFHVHRSTLSIWSPVFERMFTSGFTEKTAEEIPLPGKRAAEIEVLLRVMYTFGKAQPITEGNYTFLLELAEEYQMDRVKELCAEFLNY-----NLQESNCLKFYRVAEHFKLK-------EVMARSLEESRYQSLANLQDCEDFEKLGPEIQLKVYGEKIKELERTLQ 595

[Close]

BLAST of Spds-1 vs. Ensembl Nematostella
Match: EDO47170 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMV8])

HSP 1 Score: 57.7658 bits (138), Expect = 2.261e-9
Identity = 30/103 (29.13%), Postives = 51/103 (49.51%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ + V +   H H+++L+ CSP F+AM   + AE  + EI ++D D   M   +   Y  S   + E + + +LP A   Q    + E++   CE L  + D
Sbjct:   27 DVVIKVGSSTIHAHRVVLAACSPYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASIT-IEETNVQTLLPAACLLQ----LTEIQEICCEFLKRQLD 124

[Close]

BLAST of Spds-1 vs. Ensembl Medaka
Match: klhl40a (kelch-like protein 40a [Source:NCBI gene;Acc:101164434])

HSP 1 Score: 70.0922 bits (170), Expect = 5.664e-13
Identity = 44/155 (28.39%), Postives = 74/155 (47.74%), Query Frame = 1

Query:  187 FLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALK 651
             L  D F D  L + +KEF CH+++L+  SP F+AM L D  E  K EI ++D +PD M   L  +Y      + E + + I  +AN YQ+  +     +Y  E L      C+   ++    + P++  T  + +      RY   ++D + L+
Sbjct:   67 LLENDKFVDCVLKISDKEFPCHRLVLAASSPFFKAMFLSDLEESKKREIVLRDVNPDVMGMILRYLYTSDIS-LTEQNVQDIFMVANMYQIPSIFSVCVSYLQEKLVL--GNCLAIFRLGLLLDCPRLTLTAREFICE----RYQLVVRDQDFLQ 214

[Close]

BLAST of Spds-1 vs. Ensembl Medaka
Match: klhl20 (kelch like family member 20 [Source:NCBI gene;Acc:101170463])

HSP 1 Score: 65.855 bits (159), Expect = 1.369e-11
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSD 519
            D+ L+V  K+ + H+++LS CSP F+AM  G+ AE  + E+ ++D D   ME  ++  Y  S   V E + + +LP A   Q    + E++   CE L  + D
Sbjct:   69 DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYT-SQVIVEEGNVQTLLPAACLLQ----LAEIQEACCEFLKRQLD 166

[Close]

BLAST of Spds-1 vs. Ensembl Medaka
Match: klhl40b (kelch-like protein 40b [Source:NCBI gene;Acc:101166589])

HSP 1 Score: 61.6178 bits (148), Expect = 3.494e-10
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 1

Query:  175 RDGKF--LVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            +DG F  L  D   D  L +K+KEF CH+++L  CS  F+++ L D  E  K EI ++D +P  M   L+ +Y      V E + + I  +AN YQ+
Sbjct:   20 QDGLFDLLENDKLVDCVLKIKDKEFPCHRLVLCACSSYFRSIFLSDLEESKKREIVLEDVEPGVMGLILKYLYTSKIN-VTEQNVQDIFAVANIYQI 115

[Close]

BLAST of Spds-1 vs. Ensembl Medaka
Match: klhl3 (kelch like family member 3 [Source:NCBI gene;Acc:101162932])

HSP 1 Score: 60.4622 bits (145), Expect = 8.396e-10
Identity = 25/88 (28.41%), Postives = 52/88 (59.09%), Query Frame = 1

Query:  196 KDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            K    D++L+  + E   H+++L++CSP F AM  GD +E   +++E+++ D   +   ++ IY    + V+E + +++LP A+  Q+
Sbjct:   63 KKTLCDVQLVAGSVEVPAHRVVLASCSPYFCAMFTGDMSESRAHQVEIREVDGHTLRKLVDYIYTAEIE-VSEDNVQVLLPAASLLQL 149

[Close]

BLAST of Spds-1 vs. Ensembl Medaka
Match: klhl17 (kelch like family member 17 [Source:NCBI gene;Acc:101175399])

HSP 1 Score: 59.6918 bits (143), Expect = 1.560e-9
Identity = 27/83 (32.53%), Postives = 44/83 (53.01%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            DI L V NKE   HK++L++CSP F AM   + +E  +  + + D D   +E  ++  Y      V E + + +LP A+  Q+
Sbjct:   42 DIVLHVSNKEIKAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDSQALEQLVQYAYTAEI-VVGEGNVQTLLPAASLLQL 123

[Close]

BLAST of Spds-1 vs. Planmine SMEST
Match: SMESG000023363.1 (SMESG000023363.1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 1

Query:   97 MKAVKKDVCIQFGVEEIPEEEAVPTARDGKFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQKLKSHIKNVCTTEKIRTTINYNNRDSA 927
            MKAVKKDVCIQFGVEEIPEEEAVPTARDGKFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFC DHPAPLTLKENGEVCNECVQKLKSHIKNVCTTEKIRTTINYNNRDSA
Sbjct:    1 MKAVKKDVCIQFGVEEIPEEEAVPTARDGKFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLEDILKNIELSLSNPCSKVEKKETRVPVNFCADHPAPLTLKENGEVCNECVQKLKSHIKNVCTTEKIRTTINYNNRDSA 277

[Close]

BLAST of Spds-1 vs. Planmine SMEST
Match: SMESG000078106.1 (SMESG000078106.1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.297e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 1

Query:  211 DIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQVGHL 468
            D+ LIV  K+   H+I+LS CSP F+AM  G+ +E  + E+ ++D D   +EA +E  Y      + E + + +LP A   Q+  +
Sbjct:   57 DVALIVGQKKILAHRIVLSACSPYFKAMFTGELSESQQTEVTLRDIDESAVEALVEFCYTSQI-VIEEWNVQCLLPAACLLQLSEI 141

[Close]

BLAST of Spds-1 vs. Planmine SMEST
Match: SMESG000077860.1 (SMESG000077860.1)

HSP 1 Score: 54.299 bits (129), Expect = 5.797e-8
Identity = 27/88 (30.68%), Postives = 44/88 (50.00%), Query Frame = 1

Query:  196 KDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            +  F D+ LIV   +F  HKI+L+   P F  M + D  E S+  I++   DP+++EA +   Y      +   + + I   ANF Q+
Sbjct:   56 QGKFCDVTLIVDGHQFSAHKIVLAASIPYFNGMFMNDMVESSEKNIKLHGLDPNSLEALINFAYRGEVY-ITPNNVQSIFMGANFLQI 142

[Close]

BLAST of Spds-1 vs. Planmine SMEST
Match: SMESG000005263.1 (SMESG000005263.1)

HSP 1 Score: 54.299 bits (129), Expect = 7.127e-8
Identity = 36/149 (24.16%), Postives = 72/149 (48.32%), Query Frame = 1

Query:  157 EAVPTARD-GKFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKL--ILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMVRNFNLPKIKQTCLDIM 594
            E +  A D  +  ++   SD+ LIV+N  F  H+++L+  S  F+A+L     E  ++EIE+K+ + +  E  L  IY  +    +  D  +  +L L + Y +  + K++  +    L+   D  +  L +   +N+ ++   CL  +
Sbjct:   18 ELIAVANDIARMYLQPELSDLVLIVQNHRFPVHRVVLAARSQYFRALLYSGLKESYQSEIEIKNANHEAFEHILRYIYKGTINVSDMMDDLVMELLSLVHQYGLVSIEKQISTHLSHNLAL--DNVVSVLNVAVLYNIQELLDRCLRFL 164

[Close]

BLAST of Spds-1 vs. Planmine SMEST
Match: SMESG000078467.1 (SMESG000078467.1)

HSP 1 Score: 49.2914 bits (116), Expect = 2.834e-6
Identity = 31/92 (33.70%), Postives = 50/92 (54.35%), Query Frame = 1

Query:  184 KFLVKDPFSDIKLIVKNKEFHCHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPSFKCVNEADAKLILPLANFYQV 459
            +F +++   D+ L V++KEF  HKI+L+  S  F AM     AE  ++ IE+K    D +   LE +Y  +    NE + + +LP AN  Q+
Sbjct:   33 EFRLQNRLCDVVLKVQDKEFPAHKIVLAAASDFFSAMFSCGMAESEQSVIELKSISIDIINDILEYVYTGNIVVTNE-NVQELLPAANLTQL 123

The following BLAST results are available for this feature:

BLAST of Spds-1 vs. Ensembl Human
BLAST of Spds-1 vs. Ensembl Celegans
BLAST of Spds-1 vs. Ensembl Fly
BLAST of Spds-1 vs. Ensembl Zebrafish
BLAST of Spds-1 vs. Ensembl Xenopus
BLAST of Spds-1 vs. Ensembl Mouse
BLAST of Spds-1 vs. UniProt/SwissProt
BLAST of Spds-1 vs. TrEMBL
BLAST of Spds-1 vs. Ensembl Cavefish
BLAST of Spds-1 vs. Ensembl Sea Lamprey
BLAST of Spds-1 vs. Ensembl Yeast
BLAST of Spds-1 vs. Ensembl Nematostella
BLAST of Spds-1 vs. Ensembl Medaka
BLAST of Spds-1 vs. Planmine SMEST

BLAST of Spds-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
KBTBD2	4.030e-12	24.67	kelch repeat and BTB domain containing 2 [Source:H...	[more]
KBTBD2	6.868e-12	24.67	kelch repeat and BTB domain containing 2 [Source:H...	[more]
KLHL20	2.313e-11	32.04	kelch like family member 20 [Source:HGNC Symbol;Ac...	[more]
KLHL3	6.474e-10	30.68	kelch like family member 3 [Source:HGNC Symbol;Acc...	[more]
KLHL3	8.080e-10	30.68	kelch like family member 3 [Source:HGNC Symbol;Acc...	[more]

BLAST of Spds-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
bath-30	4.938e-13	34.07	BTB and MATH domain containing [Source:UniProtKB/...	[more]
bath-13	1.101e-12	32.81	BTB and MATH domain containing [Source:UniProtKB/...	[more]
bath-29	1.720e-12	34.09	BTB and MATH domain containing [Source:UniProtKB/...	[more]
bath-1	4.895e-12	30.53	BTB and MATH domain containing [Source:UniProtKB/...	[more]
bath-33	9.274e-12	26.98	BTB and MATH domain containing [Source:UniProtKB/...	[more]

BLAST of Spds-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
dbo	3.529e-8	29.13	gene:FBgn0040230 transcript:FBtr0332133	[more]
dbo	3.867e-8	29.13	gene:FBgn0040230 transcript:FBtr0075505	[more]
kel	4.053e-8	28.16	gene:FBgn0001301 transcript:FBtr0081042	[more]
kel	4.142e-8	28.16	gene:FBgn0001301 transcript:FBtr0081043	[more]
CG17068	1.238e-7	25.85	gene:FBgn0031098 transcript:FBtr0077341	[more]

BLAST of Spds-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
klhl40a	2.017e-12	30.14	kelch-like family member 40a [Source:NCBI gene;Acc...	[more]
klhl20	5.130e-12	33.33	kelch-like family member 20 [Source:ZFIN;Acc:ZDB-G...	[more]
klhl20	1.436e-11	33.01	kelch-like family member 20 [Source:ZFIN;Acc:ZDB-G...	[more]
klhl17	1.587e-10	33.73	kelch-like family member 17 [Source:ZFIN;Acc:ZDB-G...	[more]
klhl17	1.587e-10	33.73	kelch-like family member 17 [Source:ZFIN;Acc:ZDB-G...	[more]

BLAST of Spds-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
klhl40	1.340e-12	39.08	kelch like family member 40 [Source:NCBI gene;Acc:...	[more]
usb1	3.583e-12	32.04	U6 snRNA biogenesis phosphodiesterase 1 [Source:Xe...	[more]
usb1	9.781e-12	32.48	U6 snRNA biogenesis phosphodiesterase 1 [Source:Xe...	[more]
klhl30	2.226e-11	24.62	kelch like family member 30 [Source:NCBI gene;Acc:...	[more]
usb1	2.591e-11	32.04	U6 snRNA biogenesis phosphodiesterase 1 [Source:Xe...	[more]

BLAST of Spds-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Kbtbd2	9.084e-13	25.55	kelch repeat and BTB (POZ) domain containing 2 [So...	[more]
Kbtbd2	9.084e-13	25.55	kelch repeat and BTB (POZ) domain containing 2 [So...	[more]
Klhl20	1.405e-11	32.04	kelch-like 20 [Source:MGI Symbol;Acc:MGI:2444855]	[more]
Klhl20	1.405e-11	32.04	kelch-like 20 [Source:MGI Symbol;Acc:MGI:2444855]	[more]
Klhl6	1.015e-10	24.50	kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]	[more]

BLAST of Spds-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q5U504\|KLH40_XENLA	1.892e-12	40.00	Kelch-like protein 40 OS=Xenopus laevis OX=8355 GN...	[more]
sp\|Q5EB39\|KLH40_XENTR	7.100e-12	39.08	Kelch-like protein 40 OS=Xenopus tropicalis OX=836...	[more]
sp\|B3DIV9\|KL40A_DANRE	1.523e-11	30.14	Kelch-like protein 40a OS=Danio rerio OX=7955 GN=k...	[more]
sp\|Q5RDY3\|KBTB2_PONAB	2.094e-11	24.56	Kelch repeat and BTB domain-containing protein 2 O...	[more]
sp\|Q8IY47\|KBTB2_HUMAN	3.298e-11	24.67	Kelch repeat and BTB domain-containing protein 2 O...	[more]

BLAST of Spds-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0X3PP33	3.111e-22	29.90	BTB domain-containing protein OS=Schistocephalus s...	[more]
C1LKZ0	7.065e-21	29.17	Speckle-type POZ protein-like OS=Schistosoma japon...	[more]
C1L740	8.262e-21	29.17	Speckle-type POZ protein-like OS=Schistosoma japon...	[more]
C1LKY9	1.370e-20	29.17	Speckle-type POZ protein-like OS=Schistosoma japon...	[more]
Q5DG89	1.397e-20	29.17	SJCHGC09428 protein OS=Schistosoma japonicum OX=61...	[more]

BLAST of Spds-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
klhl20	1.206e-11	33.01	kelch like family member 20 [Source:NCBI gene;Acc:...	[more]
klhl20	1.225e-11	33.01	kelch like family member 20 [Source:NCBI gene;Acc:...	[more]
klhl40a	4.102e-11	36.08	kelch-like protein 40a [Source:NCBI gene;Acc:10303...	[more]
kbtbd2	9.832e-11	24.48	kelch repeat and BTB domain containing 2 [Source:N...	[more]
klhl17	1.620e-10	33.73	kelch like family member 17 [Source:NCBI gene;Acc:...	[more]

BLAST of Spds-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
klhl20	4.423e-12	31.07	kelch-like family member 20 [Source:ZFIN;Acc:ZDB-G...	[more]
klhl26	1.183e-10	27.56	kelch-like family member 26 [Source:NCBI gene;Acc:...	[more]
klhl2	1.184e-9	27.72	kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GE...	[more]
ENSPMAT00000002701.1	2.354e-9	29.52	pep scaffold:Pmarinus_7.0:GL481646:340:4542:-1 gen...	[more]
ENSPMAT00000007942.1	5.499e-9	25.00	pep scaffold:Pmarinus_7.0:GL477137:5731:11302:-1 g...	[more]

BLAST of Spds-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spds-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO36075	1.668e-13	31.06	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO30051	1.127e-11	27.86	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO44601	1.540e-10	30.09	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47648	1.609e-9	27.37	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47170	2.261e-9	29.13	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Spds-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
klhl40a	5.664e-13	28.39	kelch-like protein 40a [Source:NCBI gene;Acc:10116...	[more]
klhl20	1.369e-11	33.01	kelch like family member 20 [Source:NCBI gene;Acc:...	[more]
klhl40b	3.494e-10	36.08	kelch-like protein 40b [Source:NCBI gene;Acc:10116...	[more]
klhl3	8.396e-10	28.41	kelch like family member 3 [Source:NCBI gene;Acc:1...	[more]
klhl17	1.560e-9	32.53	kelch like family member 17 [Source:NCBI gene;Acc:...	[more]

BLAST of Spds-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000023363.1	0.000e+0	99.64	SMESG000023363.1	[more]
SMESG000078106.1	1.297e-11	33.72	SMESG000078106.1	[more]
SMESG000077860.1	5.797e-8	30.68	SMESG000077860.1	[more]
SMESG000005263.1	7.127e-8	24.16	SMESG000005263.1	[more]
SMESG000078467.1	2.834e-6	33.70	SMESG000078467.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30013882 ID=SMED30013882|Name=Spds-1|organism=Schmidtea mediterranea sexual|type=transcript|length=976bp
CGGTAAGATGCACATAGTGAACACACTTTTTAACAATGATTATAACAATA
ACTGAGAAATAGTTTTACTTTTTTATTTTAAAAATATCACATCAAGATGA
AAGCAGTTAAGAAAGATGTCTGTATTCAATTCGGGGTTGAAGAAATTCCA
GAGGAAGAGGCTGTGCCCACCGCGAGAGATGGCAAATTTCTGGTGAAAGA
TCCTTTCAGTGATATAAAATTAATTGTGAAGAATAAAGAATTTCATTGTC
ATAAAATAATGTTGAGTAATTGTTCACCTGTCTTTCAAGCGATGTTGTTG
GGCGATTTTGCAGAAAAGTCAAAGAATGAGATTGAAGTAAAAGATTTTGA
TCCAGACAATATGGAAGCTTTTCTTGAGGCTATTTATAATCCATCGTTCA
AATGTGTCAATGAAGCTGATGCAAAACTCATCCTTCCATTAGCCAATTTT
TATCAAGTAGGTCATTTAGTGAAAGAACTGGAGAATTATTTCTGTGAAAT
GTTATCCACACGGTCGGACAAATGCATTGATTACCTTCAAATGGTTCGAA
ATTTTAATTTACCGAAAATTAAGCAGACCTGCTTAGATATTATGGCGCGA
GGGACGAATAGTAGATATTTGACGGCAATCAAAGACAACGAGGCCTTGAA
GGAATTCGAAACTGATCTGTTAAGGCACCGGGTTAGAAATCTTGAAGATA
TTTTGAAAAACATTGAATTGAGCTTATCGAATCCTTGCAGTAAAGTTGAA
AAAAAAGAAACTCGAGTTCCAGTGAATTTTTGTGTCGATCATCCGGCTCC
GTTGACTCTCAAAGAAAATGGGGAGGTTTGCAACGAGTGTGTTCAAAAGT
TGAAATCACACATTAAAAATGTCTGTACGACTGAGAAAATTCGAACAACA
ATTAATTATAATAATAGAGATTCTGCATAATCGTTAAAAAAAATCTTTCC
TAAGAATTATTTCCATTTGAAACAAT

protein sequence of SMED30013882-orf-1

>SMED30013882-orf-1 ID=SMED30013882-orf-1|Name=SMED30013882-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=278bp
MKAVKKDVCIQFGVEEIPEEEAVPTARDGKFLVKDPFSDIKLIVKNKEFH
CHKIMLSNCSPVFQAMLLGDFAEKSKNEIEVKDFDPDNMEAFLEAIYNPS
FKCVNEADAKLILPLANFYQVGHLVKELENYFCEMLSTRSDKCIDYLQMV
RNFNLPKIKQTCLDIMARGTNSRYLTAIKDNEALKEFETDLLRHRVRNLE
DILKNIELSLSNPCSKVEKKETRVPVNFCVDHPAPLTLKENGEVCNECVQ
KLKSHIKNVCTTEKIRTTINYNNRDSA*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003824	catalytic activity
GO:0016740	transferase activity
GO:0005515	protein binding

Vocabulary: **biological process**
Term	Definition
GO:0006596	polyamine biosynthetic process
GO:0007275	multicellular organism development
GO:0031397	negative regulation of protein ubiquitination
GO:0048741	skeletal muscle fiber development

Vocabulary: **cellular component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane
GO:0005737	cytoplasm
GO:0031672	A band

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000020	protonephridia
PLANA:0000034	epidermis
PLANA:0000054	dorsal region of the epidermis
PLANA:0002032	epidermal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR000210	BTB/POZ_dom
IPR011333	SKP1/BTB/POZ_sf

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000210	BTB/POZ domain	SMART	SM00225	BTB_4	coord: 38..136 e-value: 6.6E-21 score: 85.5
IPR000210	BTB/POZ domain	PFAM	PF00651	BTB	coord: 36..134 e-value: 3.1E-23 score: 82.1
IPR000210	BTB/POZ domain	PROSITE	PS50097	BTB	coord: 38..98 score: 16.321
None	No IPR available	GENE3D	G3DSA:3.30.710.10		coord: 19..168 e-value: 7.0E-33 score: 115.7
None	No IPR available	PANTHER	PTHR22743	MEPRIN/TRAF-LIKE MATH FAMILY-C.ELEGANS	coord: 31..220
None	No IPR available	PANTHER	PTHR22743:SF160	BTB AND MATH DOMAIN CONTAINING	coord: 31..220
None	No IPR available	CDD	cd18186	BTB_POZ_ZBTB_KLHL-like	coord: 37..119 e-value: 6.65469E-23 score: 87.6093
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	SSF54695	POZ domain	coord: 30..134

Main menu

Spds-1

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 8

Owlery

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