Acyl-coenzyme A thioesterase 13

Overview
NameAcyl-coenzyme A thioesterase 13
Smed IDSMED30013825
Length (bp)597
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Acyl-coenzyme A thioesterase 13 (SMED30013825) t-SNE clustered cells

Violin plots show distribution of expression levels for Acyl-coenzyme A thioesterase 13 (SMED30013825) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Acyl-coenzyme A thioesterase 13 (SMED30013825) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Acyl-coenzyme A thioesterase 13 (SMED30013825) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30013825

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30013825SMESG000063995.1 dd_Smed_v4_4659_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013825SMESG000068881.1 SMESG000050880.1 SMESG000030694.1 SMESG000025060.1 SMESG000008043.1 SMESG000069853.1 SMESG000050888.1 SMESG000048845.1 SMESG000040582.1 SMESG000036894.1 SMESG000022699.1 SMESG000016686.1 Contig307GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013825SMESG000063995.1 Contig307GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Human
Match: ACOT13 (acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999])

HSP 1 Score: 92.0485 bits (227), Expect = 1.800e-23
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 3 
Query:  144 AITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLM--RLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            ++ ++++ +  A+ F +V     +  A P      +KV ++  N + TLHGG  ATLVD I T+ L+    G  PGVSVD+++ YM+ A L   I+  + +LK GK +AF  +D+ ++AT  L+A+G+HTK+L
Sbjct:    7 SLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERG-APGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Human
Match: ACOT13 (acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999])

HSP 1 Score: 85.8853 bits (211), Expect = 2.979e-21
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 3 
Query:  222 ATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLM--RLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            A P      +KV ++  N + TLHGG  ATLVD I T+ L+    G  PGVSVD+++ YM+ A L   I+  + +LK GK +AF  +D+ ++AT  L+A+G+HTK+L
Sbjct:   10 AAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERG-APGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 115
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Celegans
Match: C25H3.3 (pep chromosome:WBcel235:II:5694195:5695237:1 gene:WBGene00016112.1 transcript:C25H3.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C25H3.3)

HSP 1 Score: 74.3294 bits (181), Expect = 5.510e-17
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 3 
Query:  153 KIVQNLGSAKGFVKVCQGAVITKATPEM--FQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYP--PGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTK 530
            +I++N G+   F  V     +     E    ++  +V +D+ N  NTLHGG  +TL+D+  T  L+ L  P  PGVSVDL V Y+  A +  T++ +S ++K GK +AF + ++  ++   ++A G HTK
Sbjct:   11 EIIKNYGTKGQFGCVSGAGNVRAVHAEEGNLRVEFEVEKDQSNHFNTLHGGCTSTLIDIFTTGALL-LTKPARPGVSVDLHVTYLTAAKIGETLVLDSTVIKQGKTLAFTKAELYRKSDNVMIATGVHTK 139
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Celegans
Match: C25H3.14 (pep chromosome:WBcel235:II:5695383:5696358:1 gene:WBGene00016123.1 transcript:C25H3.14.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C25H3.14)

HSP 1 Score: 64.6994 bits (156), Expect = 2.221e-13
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 3 
Query:  240 QISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYP-PGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTK 530
            ++  +V +D+ N   TLHGG  A L+D   T  L+      PGVSVDL + Y+  A +  T++  S ++K G+ + F + ++  +   +++A G HTK
Sbjct:   42 RVEFEVEKDQTNQFETLHGGCTAALIDCFTTGALLLTKEARPGVSVDLHITYLTAANIGETLVLNSTVIKQGRSLGFTKAELYRKRDNAMIATGVHTK 139
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Celegans
Match: F42H10.6 (Putative esterase F42H10.6 [Source:UniProtKB/Swiss-Prot;Acc:P34419])

HSP 1 Score: 49.6766 bits (117), Expect = 1.437e-7
Identity = 35/131 (26.72%), Postives = 60/131 (45.80%), Query Frame = 3 
Query:  138 LSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGV-SVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHT 527
            L+   ++   +  +  F +V +     + T       + V     N   TLHGG  ATL DVI    +       G+ SV+L+V Y+    +   +   + +LKVG+ MAF + +   ++   + A+GKHT
Sbjct:   21 LAEQVRVFNKMKGSTNFNRVAEDVYPVEVTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMASVELAVSYLLPVKVGDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHT 151
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Celegans
Match: F42H10.6 (Putative esterase F42H10.6 [Source:UniProtKB/Swiss-Prot;Acc:P34419])

HSP 1 Score: 49.6766 bits (117), Expect = 1.437e-7
Identity = 35/131 (26.72%), Postives = 60/131 (45.80%), Query Frame = 3 
Query:  138 LSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGV-SVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHT 527
            L+   ++   +  +  F +V +     + T       + V     N   TLHGG  ATL DVI    +       G+ SV+L+V Y+    +   +   + +LKVG+ MAF + +   ++   + A+GKHT
Sbjct:   21 LAEQVRVFNKMKGSTNFNRVAEDVYPVEVTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMASVELAVSYLLPVKVGDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHT 151
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Fly
Match: CG16986 (gene:FBgn0035356 transcript:FBtr0072930)

HSP 1 Score: 82.8037 bits (203), Expect = 4.003e-20
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 3 
Query:  129 KMPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            K  L     I + +  + GF    Q   I           LKV QD  N+   LHGG+I TLVD+I T  LM     PGVSVDLSV ++N A L   ++ ++ L KVGK +AF +  +  +    ++A+G H KY+
Sbjct:    5 KKGLEFAKHITEIINKSTGFESHLQKVKIVDGGDGACTAELKVDQDHVNLYKFLHGGYIMTLVDLITTYALMSKPCHPGVSVDLSVNFLNGAKLGDDVVIQANLSKVGKYLAFIDCTLKHKKDDLVIAKGTHLKYI 140
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Fly
Match: CG16986 (gene:FBgn0035356 transcript:FBtr0302434)

HSP 1 Score: 82.8037 bits (203), Expect = 4.003e-20
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 3 
Query:  129 KMPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            K  L     I + +  + GF    Q   I           LKV QD  N+   LHGG+I TLVD+I T  LM     PGVSVDLSV ++N A L   ++ ++ L KVGK +AF +  +  +    ++A+G H KY+
Sbjct:    5 KKGLEFAKHITEIINKSTGFESHLQKVKIVDGGDGACTAELKVDQDHVNLYKFLHGGYIMTLVDLITTYALMSKPCHPGVSVDLSVNFLNGAKLGDDVVIQANLSKVGKYLAFIDCTLKHKKDDLVIAKGTHLKYI 140
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Fly
Match: CG16985 (gene:FBgn0035355 transcript:FBtr0072929)

HSP 1 Score: 63.1586 bits (152), Expect = 1.222e-12
Identity = 38/136 (27.94%), Postives = 65/136 (47.79%), Query Frame = 3 
Query:  129 KMPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            K+ +  + ++ +    + GF +V +   IT            V  +  N   TLHGG  AT+VD   T  LM  G  PGV+ +L+V Y+  A     I  +   ++ GKKMA+ +  +  ++   ++A+G   KY+
Sbjct:    5 KLGMDFVKQMSEYASGSNGFDRVLKMIKITGGGDGRAIGEFTVANEHLNRQGTLHGGLTATIVDNCTTYALMSKGSHPGVTANLNVSYIAAAKPGELIEIDCNTVRAGKKMAYLDCILRRKSDGKIIAKGGQVKYI 140
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Zebrafish
Match: acot13 (acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437])

HSP 1 Score: 97.8265 bits (242), Expect = 8.042e-26
Identity = 50/140 (35.71%), Postives = 83/140 (59.29%), Query Frame = 3 
Query:  120 LLIKMPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGY-PPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            ++  + L+A+ +I + +  + GF +V     +  A P      +KV +   N   TLHGG  ATLVD+I T+ +M      PGVSVD+++ YMN A +   IL  +++LK G+ +AF  +D+ ++A   L+A+G+HTK+L
Sbjct:    5 VMASLTLNAVKQIFRAMADSPGFDRVLSKVEVLSAAPGKVVCEMKVEEQHTNRGGTLHGGMTATLVDMISTMAIMYSERGAPGVSVDMNITYMNAAKIGEDILITAQVLKQGRTLAFATVDLTNKANGKLIAQGRHTKHL 144
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Zebrafish
Match: acot13 (acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437])

HSP 1 Score: 95.9005 bits (237), Expect = 4.387e-25
Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 3 
Query:  120 LLIKMPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGY-PPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            ++  + L+ + +I + +  + GF +V     +  A P      +KV +   N   TLHGG  ATLVD+I T+ +M      PGVSVD+++ YMN A +   IL  +++LK G+ +AF  +D+ ++A   L+A+G+HTK+L
Sbjct:    5 VMASLTLNTVKQIFRAMADSPGFDRVLSKVEVLSAAPGKVVCEMKVEEQHTNRGGTLHGGMTATLVDMISTMAIMYSERGAPGVSVDMNITYMNAAKIGEDILITAQVLKQGRTLAFATVDLTNKANGKLIAQGRHTKHL 144
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Zebrafish
Match: acot13 (acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437])

HSP 1 Score: 91.6633 bits (226), Expect = 2.105e-23
Identity = 49/142 (34.51%), Postives = 82/142 (57.75%), Query Frame = 3 
Query:  123 LIKMPLSAITKIVQNLGSAKGFVKVCQGAVITK---ATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGY-PPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            +  + L+ + +I + +  + GF +V     + +   A P      +KV +   N   TLHGG  ATLVD+I T+ +M      PGVSVD+++ YMN A +   IL  +++LK G+ +AF  +D+ ++A   L+A+G+HTK+L
Sbjct:    1 MASLTLNTVKQIFRAMADSPGFDRVLSKVSVVEVLSAAPGKVVCEMKVEEQHTNRGGTLHGGMTATLVDMISTMAIMYSERGAPGVSVDMNITYMNAAKIGEDILITAQVLKQGRTLAFATVDLTNKANGKLIAQGRHTKHL 142
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Xenopus
Match: pgat (Primordial germ cell-associated transcript protein [Source:Xenbase;Acc:XB-GENE-6464659])

HSP 1 Score: 95.9005 bits (237), Expect = 5.959e-25
Identity = 48/136 (35.29%), Postives = 79/136 (58.09%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGY-PPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            +  S +  I + LG   GF +V     +  A P      L+V ++  N   TLHGG  ATLVD + T+ L+      PGVSVD+++ YMN A +  ++L  +++LK G+ +AF  +D+ ++ +  L+A+G+HTK+L
Sbjct:    4 LSTSTVRAIFKALGDGPGFDRVLSKLNLVSAAPGKVVCELQVEEEHTNRGGTLHGGLTATLVDTVSTVALLHTERGAPGVSVDMNITYMNAAKIGDSVLITAQVLKQGRTLAFATVDVTNKVSGKLIAQGRHTKHL 139
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Mouse
Match: Acot13 (acyl-CoA thioesterase 13 [Source:MGI Symbol;Acc:MGI:1914084])

HSP 1 Score: 93.9745 bits (232), Expect = 2.528e-24
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 3 
Query:  183 GFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLM--RLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            GF +V +   +  A PE     +KV +   N + TLHGG  ATLVD I T+ LM    G  PGVSVD+++ YM+ A +   I+  + +LK GK +AF  +D+ ++ T  L+A+G+HTK+L
Sbjct:   20 GFDRVLEKVTLVSAAPEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERG-APGVSVDMNITYMSPAKIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHTKHL 138
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. UniProt/SwissProt
Match: sp|Q9CQR4|ACO13_MOUSE (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.768e-23
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 3 
Query:  183 GFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLM--RLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            GF +V +   +  A PE     +KV +   N + TLHGG  ATLVD I T+ LM    G  PGVSVD+++ YM+ A +   I+  + +LK GK +AF  +D+ ++ T  L+A+G+HTK+L
Sbjct:   20 GFDRVLEKVTLVSAAPEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERG-APGVSVDMNITYMSPAKIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHTKHL 138
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. UniProt/SwissProt
Match: sp|Q5R833|ACO13_PONAB (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.645e-23
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 3 
Query:  144 AITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLM--RLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            ++ ++++ +  A+ F +V     +  A P      +KV ++  N + TLHGG  ATLVD I T+ L+    G  PGVSVD+++ YM+ A L   I+  + +LK GK +AF  +D+ ++AT  L+A+G+HTK+L
Sbjct:    7 SLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERG-APGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. UniProt/SwissProt
Match: sp|Q9NPJ3|ACO13_HUMAN (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.645e-23
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 3 
Query:  144 AITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLM--RLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            ++ ++++ +  A+ F +V     +  A P      +KV ++  N + TLHGG  ATLVD I T+ L+    G  PGVSVD+++ YM+ A L   I+  + +LK GK +AF  +D+ ++AT  L+A+G+HTK+L
Sbjct:    7 SLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERG-APGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. UniProt/SwissProt
Match: sp|P87304|YB22_SCHPO (Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC31F10.02 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.342e-13
Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 3 
Query:  138 LSAITKIVQNLGSAKGF-VKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLG-YPPGVSVDLSVQYMNV-ACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            LS +  + Q+  +  GF   V     I  A P   + SLK+ +   N M  LHGG IA L D+  +L L   G +  GVS+D++  ++     L S+IL  ++  ++G  +AF  +D +  ++  + A+G+HTK++
Sbjct:   11 LSFVRSVWQDFVNTNGFDAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDLGGSLALASRGLFISGVSIDMNQTFLQSGGTLGSSILLHAKCDRLGSNIAFTSVDFL-TSSNEVFAKGRHTKFV 145
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. UniProt/SwissProt
Match: sp|P34419|YLZ6_CAEEL (Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV=2)

HSP 1 Score: 49.6766 bits (117), Expect = 1.828e-6
Identity = 35/131 (26.72%), Postives = 60/131 (45.80%), Query Frame = 3 
Query:  138 LSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGV-SVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHT 527
            L+   ++   +  +  F +V +     + T       + V     N   TLHGG  ATL DVI    +       G+ SV+L+V Y+    +   +   + +LKVG+ MAF + +   ++   + A+GKHT
Sbjct:   21 LAEQVRVFNKMKGSTNFNRVAEDVYPVEVTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMASVELAVSYLLPVKVGDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHT 151
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. TrEMBL
Match: A0A183TC22 (Acyl-coenzyme A thioesterase 13 OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS14020 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.294e-32
Identity = 62/135 (45.93%), Postives = 88/135 (65.19%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            M   A+ KI+++L S  GF  V     +  A     +   +VT++  N +NTLHGG+IATLVD I ++DL+R G    VSV+LS  Y+  A +DS +  ES +LK+GK +AFCE+ + DEA+ SLLA+GKHTKY+
Sbjct:    1 MSALAVVKIIRSLASDGGFNAVFAPLQVVLADQNCLKCRFQVTKETSNSLNTLHGGYIATLVDFISSVDLVRRGRLAHVSVELSTSYVKAAKMDSWVSVESYILKLGKTLAFCEVSLFDEASGSLLAKGKHTKYI 135
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BLAST of Acyl-coenzyme A thioesterase 13 vs. TrEMBL
Match: A0A3P7PF83 (4HBT domain-containing protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS18582 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 6.191e-31
Identity = 57/135 (42.22%), Postives = 87/135 (64.44%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            M + A+T +++ + S  GF +V     +  A   + +   +VT++  N   TLHGG+ ATLVD I ++DL R G+   VSV+LS  Y+  A ++S +  ES +LK+GK +AFCE+ + DEA+ SLLA+GKHTKY+
Sbjct:    1 MSVQAVTNLIRTMASDGGFNRVFAPLQVVLADENLLKCRFQVTKELGNSFRTLHGGYTATLVDFISSVDLARRGHLQHVSVELSTSYVKAAKMNSWVSVESNILKLGKTLAFCEVTLFDEASGSLLAKGKHTKYM 135
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BLAST of Acyl-coenzyme A thioesterase 13 vs. TrEMBL
Match: C1LI05 (Putative thioesterase superfamily member 2 OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.618e-29
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            M L+ + +I+ +L S   F  + +G      T        KVT  + N +NTLHGGFI   VD I ++DLMRLGY   VSV+L   ++N   L+S I  +S +LK GK++AFCE+  +DE +  L+ARG HTKY+
Sbjct:    1 MSLNVVNQIISHLTSQGTFNHIFKGIQAFSLTENCLTCRFKVTNAEANSLNTLHGGFILGAVDFITSVDLMRLGYKKHVSVNLETSFINPGKLNSWIRSDSYILKKGKRLAFCEVKFVDERSGELVARGTHTKYI 135
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BLAST of Acyl-coenzyme A thioesterase 13 vs. TrEMBL
Match: C1L5N4 (Putative thioesterase superfamily member 2 OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.002e-29
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            M L+ + +I+ +L S   F  + +G      T        KVT  + N +NTLHGGFI   VD I ++DLMRLGY   VSV+L   ++N   L+S I  +S +LK GK++AFCE+  +DE +  L+ARG HTKY+
Sbjct:    2 MSLNVVNQIISHLTSQGTFNHIFKGIQAFSLTENCLTCRFKVTNAEANSLNTLHGGFILGAVDFITSVDLMRLGYKKHVSVNLETSFINPGKLNSWIKSDSYILKKGKRLAFCEVKFVDERSGELVARGTHTKYI 136
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. TrEMBL
Match: A0A0R3TP16 (4HBT domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS9173 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.953e-28
Identity = 50/133 (37.59%), Postives = 86/133 (64.66%), Query Frame = 3 
Query:  138 LSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            LS ++K++++L S+  F  V     +  A     +   +VT+ + N +NTLHGG+ ++L+D I T+DL+R G    VSV+L+  +M+ A + S +  ESR+L+ G+ +AFCE+ + DE +  L+A+G+HTKY+
Sbjct:    4 LSNVSKLIRSLASSGNFNSVFAPIEVVSANENSLRCRFQVTEKEANSLNTLHGGYTSSLIDFISTVDLLRQGVSRTVSVELATSFMSAAPVGSWVQVESRVLRSGRTLAFCEVSLHDEPSGKLIAKGRHTKYI 136
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Cavefish
Match: acot13 (acyl-CoA thioesterase 13 [Source:NCBI gene;Acc:103042792])

HSP 1 Score: 93.2041 bits (230), Expect = 4.808e-24
Identity = 46/136 (33.82%), Postives = 81/136 (59.56%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGY-PPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            + L+ + ++++ +    GF +V     +  ATP      +KV ++  N +  LHGG  ATL+D+I T  LM      PGVSVD+++ YM  A +   ++  +++LK G+ +AF  +D+I++A   L+A+G+HTK+L
Sbjct:    4 LSLNTLRQVLRTMVDTPGFDRVLNKVELVSATPGKVICEMKVEEEHTNRLGMLHGGMTATLIDIISTTALMYTERGAPGVSVDMNITYMTAAKVGEDVVITAQVLKEGRTLAFTTVDLINKANGKLIAQGRHTKHL 139
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006205.1 (pep scaffold:Pmarinus_7.0:GL476624:358790:361356:1 gene:ENSPMAG00000005608.1 transcript:ENSPMAT00000006205.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 90.8929 bits (224), Expect = 7.658e-24
Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = 3 
Query:  138 LSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYP-PGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            L A+ +++  +  + GF KV +   +  A P      + V ++  N   TLHGG  ATLVDV+ T  L+      PGVSVD+++ YM+ A +   ++  + +L+ G+ +AF  +DI ++AT  L+A+G+HTK+L
Sbjct:    9 LRAMRQVMSAMCESPGFDKVLRKVEVVSAEPGHVVCEMPVCEEHTNRGGTLHGGLTATLVDVVSTTALLSTERAAPGVSVDMNITYMSAARVGEELVIAAHVLRQGRTLAFATVDITNKATGRLVAQGRHTKHL 142
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Nematostella
Match: EDO37359 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SG16])

HSP 1 Score: 73.559 bits (179), Expect = 7.741e-17
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3 
Query:  183 GFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDI-IDEATKSLLARGKHTKYL 536
            GF +V + A +         I + V+Q+  N M TLHGG  AT+VD + T+ ++      GVSVD+++ Y+  AC    ++ E    K GK +AF   +I + + T  +LA GKHTKY+
Sbjct:   21 GFDRVLEKAELAAFGGGRCIIKMTVSQEHENRMGTLHGGLTATMVDDVTTMAIISQTGQAGVSVDMNISYLKAACRGDEVIFEGICNKAGKNLAFSTAEIKLKDGT--VLAMGKHTKYI 137
[Close]
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Medaka
Match: acot13 (acyl-CoA thioesterase 13 [Source:NCBI gene;Acc:101166886])

HSP 1 Score: 91.2781 bits (225), Expect = 2.370e-23
Identity = 47/139 (33.81%), Postives = 83/139 (59.71%), Query Frame = 3 
Query:  123 LIKMPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGY-PPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYL 536
            +  + + ++ ++++ L  +  F +V     I  A+       ++V ++  N   TLHGG  ATLVDV+ TL +M      PGVSVD+++ YMN A +   +L  +++LK G+ +AF  +D+ ++AT  L+A+G+HTK+L
Sbjct:    1 MASLTVKSLREVMRALADSSCFDRVLSKVDILAASQGKVVCEMQVKEEHTNRGGTLHGGLTATLVDVVSTLAIMNSERGAPGVSVDMNITYMNAAKIGEDVLITAQVLKQGRTLAFATVDLTNKATGKLIAQGRHTKHL 139
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Planmine SMEST
Match: SMESG000063995.1 (SMESG000063995.1)

HSP 1 Score: 279.256 bits (713), Expect = 1.351e-97
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3 
Query:  132 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYLT 539
            MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYLT
Sbjct:    1 MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMMNTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCESRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYLT 136
The following BLAST results are available for this feature:
BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ACOT131.800e-2336.84acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:H... [more]
ACOT132.979e-2142.99acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:H... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4
Match NameE-valueIdentityDescription
C25H3.35.510e-1733.85pep chromosome:WBcel235:II:5694195:5695237:1 gene:... [more]
C25H3.142.221e-1332.65pep chromosome:WBcel235:II:5695383:5696358:1 gene:... [more]
F42H10.61.437e-726.72Putative esterase F42H10.6 [Source:UniProtKB/Swis... [more]
F42H10.61.437e-726.72Putative esterase F42H10.6 [Source:UniProtKB/Swis... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
CG169864.003e-2036.76gene:FBgn0035356 transcript:FBtr0072930[more]
CG169864.003e-2036.76gene:FBgn0035356 transcript:FBtr0302434[more]
CG169851.222e-1227.94gene:FBgn0035355 transcript:FBtr0072929[more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
acot138.042e-2635.71acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE... [more]
acot134.387e-2535.00acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE... [more]
acot132.105e-2334.51acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
pgat5.959e-2535.29Primordial germ cell-associated transcript protein... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Acot132.528e-2440.83acyl-CoA thioesterase 13 [Source:MGI Symbol;Acc:MG... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9CQR4|ACO13_MOUSE1.768e-2340.83Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX... [more]
sp|Q5R833|ACO13_PONAB8.645e-2336.84Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX... [more]
sp|Q9NPJ3|ACO13_HUMAN8.645e-2336.84Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX... [more]
sp|P87304|YB22_SCHPO2.342e-1330.88Putative esterase C31F10.02 OS=Schizosaccharomyces... [more]
sp|P34419|YLZ6_CAEEL1.828e-626.72Putative esterase F42H10.6 OS=Caenorhabditis elega... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183TC222.294e-3245.93Acyl-coenzyme A thioesterase 13 OS=Schistocephalus... [more]
A0A3P7PF836.191e-3142.224HBT domain-containing protein OS=Dibothriocephalu... [more]
C1LI051.618e-2942.22Putative thioesterase superfamily member 2 OS=Schi... [more]
C1L5N42.002e-2942.22Putative thioesterase superfamily member 2 OS=Schi... [more]
A0A0R3TP162.953e-2837.594HBT domain-containing protein OS=Rodentolepis nan... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
acot134.808e-2433.82acyl-CoA thioesterase 13 [Source:NCBI gene;Acc:103... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000006205.17.658e-2435.07pep scaffold:Pmarinus_7.0:GL476624:358790:361356:1... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO373597.741e-1736.13Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
acot132.370e-2333.81acyl-CoA thioesterase 13 [Source:NCBI gene;Acc:101... [more]
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BLAST of Acyl-coenzyme A thioesterase 13 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000063995.11.351e-97100.00SMESG000063995.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30013825 ID=SMED30013825|Name=Acyl-coenzyme A thioesterase 13|organism=Schmidtea mediterranea sexual|type=transcript|length=597bp
TTTTGTTATAACCTATATTTTAGCTTTCCTTTATTTTCGTTTGATTTATA
ATACAAAAATTCTAAATTATTAAATTCTATCGATTAGAAATTTTATTAAA
ATAACAAAATTTAATTTTTTTATTAATTAAAATGCCTTTGTCAGCTATCA
CTAAAATCGTGCAAAATCTAGGTTCTGCTAAAGGGTTCGTAAAAGTATGT
CAAGGCGCAGTTATAACAAAAGCAACGCCAGAGATGTTTCAAATTTCTCT
TAAAGTTACACAAGATAAATGCAATATGATGAATACACTACATGGTGGTT
TTATAGCCACTTTAGTTGACGTAATTCCAACATTAGATCTTATGAGATTA
GGTTATCCTCCCGGAGTTAGTGTGGATTTATCAGTTCAGTATATGAATGT
TGCGTGTTTAGACTCAACAATTCTTTGTGAATCTCGTTTATTAAAAGTTG
GGAAAAAAATGGCATTTTGTGAATTAGATATAATAGATGAAGCAACAAAA
TCACTTCTCGCCAGAGGCAAGCACACTAAATATTTGACTTAGCCTGTTTT
ATGAATGAAATTAATTTGAAAATATAATATTTTTAGTTCAAAAAAAA
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protein sequence of SMED30013825-orf-1

>SMED30013825-orf-1 ID=SMED30013825-orf-1|Name=SMED30013825-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=137bp
MPLSAITKIVQNLGSAKGFVKVCQGAVITKATPEMFQISLKVTQDKCNMM
NTLHGGFIATLVDVIPTLDLMRLGYPPGVSVDLSVQYMNVACLDSTILCE
SRLLKVGKKMAFCELDIIDEATKSLLARGKHTKYLT*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
Vocabulary: INTERPRO
TermDefinition
IPR003736PAAI_dom
IPR039298ACOT13
IPR006683Thioestr_dom
IPR029069HotDog_dom_sf
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
GO:0005739mitochondrion
GO:0005819spindle
GO:0005829cytosol
GO:0005856cytoskeleton
GO:0070062extracellular exosome
Vocabulary: molecular function
TermDefinition
GO:0016787hydrolase activity
GO:0047617acyl-CoA hydrolase activity
Vocabulary: biological process
TermDefinition
GO:0051289protein homotetramerization
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 50..121
e-value: 1.1E-10
score: 41.7
NoneNo IPR availableGENE3DG3DSA:3.10.129.10coord: 1..136
e-value: 6.8E-35
score: 122.1
NoneNo IPR availablePANTHERPTHR21660:SF1ACYL-COENZYME A THIOESTERASE 13coord: 30..133
NoneNo IPR availableCDDcd03443PaaI_thioesterasecoord: 25..135
e-value: 6.93321E-20
score: 76.8278
IPR003736Phenylacetic acid degradation-related domainTIGRFAMTIGR00369TIGR00369coord: 25..129
e-value: 7.5E-11
score: 40.1
IPR039298Acyl-coenzyme A thioesterase 13PANTHERPTHR21660THIOESTERASE SUPERFAMILY MEMBER-RELATEDcoord: 30..133
IPR029069HotDog domain superfamilySUPERFAMILYSSF54637Thioesterase/thiol ester dehydrase-isomerasecoord: 4..133