60S acidic ribosomal protein P0

Overview
Name60S acidic ribosomal protein P0
Smed IDSMED30013796
Length (bp)1036
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60S acidic ribosomal protein P0 (SMED30013796) t-SNE clustered cells

Violin plots show distribution of expression levels for 60S acidic ribosomal protein P0 (SMED30013796) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30013796

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30013796SMESG000049529.1 SmedASXL_000323SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Human
Match: RPLP0 (ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371])

HSP 1 Score: 185.267 bits (469), Expect = 1.570e-73
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 111.694 bits (278), Expect = 1.570e-73
Identity = 51/94 (54.26%), Postives = 69/94 (73.40%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL IQQ+++NGS Y+PE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE++Y    AE +K +LADPS F
Sbjct:  182 PFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Human
Match: RPLP0 (ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371])

HSP 1 Score: 185.267 bits (469), Expect = 1.570e-73
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 111.694 bits (278), Expect = 1.570e-73
Identity = 51/94 (54.26%), Postives = 69/94 (73.40%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL IQQ+++NGS Y+PE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE++Y    AE +K +LADPS F
Sbjct:  182 PFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Human
Match: RPLP0 (ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371])

HSP 1 Score: 185.267 bits (469), Expect = 1.570e-73
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 111.694 bits (278), Expect = 1.570e-73
Identity = 51/94 (54.26%), Postives = 69/94 (73.40%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL IQQ+++NGS Y+PE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE++Y    AE +K +LADPS F
Sbjct:  182 PFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Human
Match: RPLP0 (ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371])

HSP 1 Score: 185.267 bits (469), Expect = 1.971e-64
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 81.2629 bits (199), Expect = 1.971e-64
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIK 798
            PF +GL IQQ+++NGS Y+PE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH I N  K
Sbjct:  182 PFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Human
Match: RPLP0 (ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371])

HSP 1 Score: 162.155 bits (409), Expect = 4.286e-62
Identity = 87/148 (58.78%), Postives = 108/148 (72.97%), Query Frame = 2 
Query:  176 QMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   19 QMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 166

HSP 2 Score: 96.2857 bits (238), Expect = 4.286e-62
Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAE 849
            PF +GL IQQ+++NGS Y+PE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE++Y    AE
Sbjct:  162 PFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAE 243
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Celegans
Match: rla-0 (60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572])

HSP 1 Score: 196.823 bits (499), Expect = 4.638e-77
Identity = 97/177 (54.80%), Postives = 123/177 (69.49%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  KL   FE+Y K  +V  DNV S+QMQ IR+ +RG AEI++GKNT+++  +  +    P   KL PH+  NVGFVFT  DL E++  +L  +  APAKA A+AP  V++P Q T +GPEKTSFFQALQIPTKI RGTIEI+NDV LIKEGD V  SE+ LL ML + PF+ G
Sbjct:   10 KANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYG 186

HSP 2 Score: 110.538 bits (275), Expect = 4.638e-77
Identity = 47/94 (50.00%), Postives = 74/94 (78.72%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF YGL ++Q+Y++G+ Y+PE LD++ E++ K F+ GV+ VA+VSLA+N PTLASV H +AN +++M+ ++  ++ + KEAE IK ++ADPSKF
Sbjct:  182 PFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Celegans
Match: F10E7.5 (Ribosome assembly factor mrt4 [Source:UniProtKB/TrEMBL;Acc:Q19302])

HSP 1 Score: 52.7582 bits (125), Expect = 8.097e-8
Identity = 42/173 (24.28%), Postives = 79/173 (45.66%), Query Frame = 2 
Query:  107 KLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLS--APEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFF------QALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKI 601
            +++   +QY  +FI    N+ S +   IR+  +  +    GKN ++   + K K    A +  K    LKG  G +FTN    EV+        +  A+   +A  +V +P+     GP     F      + L +PTK+ +G I +    ++ KEG+ +   +A++L+  ++
Sbjct:   29 EVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPE-----GPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEV 196
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Celegans
Match: F10E7.5 (Ribosome assembly factor mrt4 [Source:UniProtKB/TrEMBL;Acc:Q19302])

HSP 1 Score: 52.7582 bits (125), Expect = 8.097e-8
Identity = 42/173 (24.28%), Postives = 79/173 (45.66%), Query Frame = 2 
Query:  107 KLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLS--APEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFF------QALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKI 601
            +++   +QY  +FI    N+ S +   IR+  +  +    GKN ++   + K K    A +  K    LKG  G +FTN    EV+        +  A+   +A  +V +P+     GP     F      + L +PTK+ +G I +    ++ KEG+ +   +A++L+  ++
Sbjct:   29 EVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPE-----GPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEV 196
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Fly
Match: RpLP0 (gene:FBgn0000100 transcript:FBtr0334113)

HSP 1 Score: 204.912 bits (520), Expect = 7.298e-78
Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K  Y  K+   F+++ K FIV ADNV S+QMQNIR  LRG A +++GKNT+M+  I  +  + P+  KL PH+KGNVGFVFT GDL EV+D +L  K++APA+  A+AP+ V +P Q T LGPEKTSFFQAL IPTKI++GTIEIINDV ++K GD V  SEA LL ML I PF+ G
Sbjct:   10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 105.916 bits (263), Expect = 7.298e-78
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF YGL + Q+Y++GS +SPE LDI  ED+   F +GV  +AAV L++  PT+AS PH IAN  K+++A++  +E   KEA  IKEY+ DPSKF
Sbjct:  182 PFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Fly
Match: RpLP0 (gene:FBgn0000100 transcript:FBtr0078481)

HSP 1 Score: 204.912 bits (520), Expect = 7.298e-78
Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K  Y  K+   F+++ K FIV ADNV S+QMQNIR  LRG A +++GKNT+M+  I  +  + P+  KL PH+KGNVGFVFT GDL EV+D +L  K++APA+  A+AP+ V +P Q T LGPEKTSFFQAL IPTKI++GTIEIINDV ++K GD V  SEA LL ML I PF+ G
Sbjct:   10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 105.916 bits (263), Expect = 7.298e-78
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF YGL + Q+Y++GS +SPE LDI  ED+   F +GV  +AAV L++  PT+AS PH IAN  K+++A++  +E   KEA  IKEY+ DPSKF
Sbjct:  182 PFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Fly
Match: RpLP0-like (gene:FBgn0033485 transcript:FBtr0088425)

HSP 1 Score: 63.1586 bits (152), Expect = 4.610e-11
Identity = 38/159 (23.90%), Postives = 80/159 (50.31%), Query Frame = 2 
Query:  128 QYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLS--APEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQ-LTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQML 595
            +Y  IF+    N+ +  ++++R+ L+  +  + GKN +M+  + + K     PE  KL   L G VG +FT+    EV +          A++  +A  +V +P   L           ++L +PTK+ +G + + +D  + +EG ++   +A++L+++
Sbjct:   36 KYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLV 194
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Zebrafish
Match: rplp0 (ribosomal protein, large, P0 [Source:NCBI gene;Acc:58101])

HSP 1 Score: 184.882 bits (468), Expect = 5.341e-74
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   +L PH++GNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 113.235 bits (282), Expect = 5.341e-74
Identity = 50/92 (54.35%), Postives = 69/92 (75.00%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPS 879
            PF YGL IQQ+Y+NGS YSPE LDI+E+ + K F+EGV+ +A+V L +  PTLAS+PH I N  K ++A++VE++Y    AE +K YLADP+
Sbjct:  182 PFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPT 273
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Zebrafish
Match: rplp0 (ribosomal protein, large, P0 [Source:NCBI gene;Acc:58101])

HSP 1 Score: 150.599 bits (379), Expect = 1.987e-44
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEII 526
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   +L PH++GNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI+
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Zebrafish
Match: mrto4 (MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142])

HSP 1 Score: 58.151 bits (139), Expect = 2.237e-9
Identity = 48/192 (25.00%), Postives = 93/192 (48.44%), Query Frame = 2 
Query:   80 LQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSA--PEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTS-FFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG*KFNRSMKM 646
            L+ K +   +L+   + Y  +F+ + +N+ + ++++IR   +  +    GKN +M   + K           KL   L+G VG +FTN   +EV++     K    A+A   A ++V + +      P       + L +PT + +G + +I D ++ KEGD +   +A++   LK++ F M  +F  S+K 
Sbjct:   20 LEAKQNLIEELRKCADIYRYVFVFSVENMRNNKLKDIRTAWK-HSRFFFGKNKVMMIALGKGPTDEYKDNLHKLSRFLRGEVGVLFTNKTKDEVQEYFGNFKEVDYARAGNTASMAVTLDEGPLDQFPHSMEPQLRQLGLPTALKKGVVTLIKDFEVCKEGDTLTPEQARI---LKLFGFEMA-EFKLSIKC 206
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Xenopus
Match: septin3 (septin 3 [Source:Xenbase;Acc:XB-GENE-1002286])

HSP 1 Score: 195.282 bits (495), Expect = 1.829e-75
Identity = 101/177 (57.06%), Postives = 124/177 (70.06%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL  H+KGNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLSHIKGNVGFVFTKEDLTEVRDMLLANKVPACARAGAIAPCGVVVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 108.227 bits (269), Expect = 1.829e-75
Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPS 879
            PF YGL IQQ+Y+NGS YSPE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH + N  K ++A++VE++Y+   A+ +K +LADPS
Sbjct:  182 PFSYGLIIQQVYDNGSIYSPEVLDITEEALHVRFLEGVRNVASVCLQIGYPTVASVPHSVINGYKRVLAIAVETDYSFPLADKVKAFLADPS 273
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Xenopus
Match: septin3 (septin 3 [Source:Xenbase;Acc:XB-GENE-1002286])

HSP 1 Score: 147.517 bits (371), Expect = 3.303e-61
Identity = 87/177 (49.15%), Postives = 105/177 (59.32%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I               HL+ N           E K I L   + A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRG-------------HLENNPAL--------EKKIIFLVMWVPACARAGAIAPCGVVVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSYG 165

HSP 2 Score: 108.227 bits (269), Expect = 3.303e-61
Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPS 879
            PF YGL IQQ+Y+NGS YSPE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH + N  K ++A++VE++Y+   A+ +K +LADPS
Sbjct:  161 PFSYGLIIQQVYDNGSIYSPEVLDITEEALHVRFLEGVRNVASVCLQIGYPTVASVPHSVINGYKRVLAIAVETDYSFPLADKVKAFLADPS 252
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Xenopus
Match: septin3 (septin 3 [Source:Xenbase;Acc:XB-GENE-1002286])

HSP 1 Score: 161.384 bits (407), Expect = 3.607e-47
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIIN 529
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL  H+KGNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI+ 
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLSHIKGNVGFVFTKEDLTEVRDMLLANKVPACARAGAIAPCGVVVPAQNTGLGPEKTSFFQALGITTKISRGTIEILG 156

HSP 2 Score: 61.2326 bits (147), Expect = 3.762e-10
Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  664 EALDISEEDIMKGFME--GVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPS 879
            +AL I+ + I +G +E  GV+ VA+V L +  PT+ASVPH + N  K ++A++VE++Y+   A+ +K +LADPS
Sbjct:  139 QALGITTK-ISRGTIEILGVRNVASVCLQIGYPTVASVPHSVINGYKRVLAIAVETDYSFPLADKVKAFLADPS 211
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Mouse
Match: Rplp0 (ribosomal protein, large, P0 [Source:MGI Symbol;Acc:MGI:1927636])

HSP 1 Score: 184.882 bits (468), Expect = 6.346e-73
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 109.383 bits (272), Expect = 6.346e-73
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL IQQ+++NGS Y+PE LDI+E+ +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE+EY     E +K +LADPS F
Sbjct:  182 PFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Mouse
Match: Rplp0 (ribosomal protein, large, P0 [Source:MGI Symbol;Acc:MGI:1927636])

HSP 1 Score: 160.229 bits (404), Expect = 7.207e-61
Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 2 
Query:  179 MQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            MQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:    1 MQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 147

HSP 2 Score: 93.9745 bits (232), Expect = 7.207e-61
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEY 831
            PF +GL IQQ+++NGS Y+PE LDI+E+ +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE+EY
Sbjct:  143 PFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEY 218
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Mouse
Match: Rplp0 (ribosomal protein, large, P0 [Source:MGI Symbol;Acc:MGI:1927636])

HSP 1 Score: 134.42 bits (337), Expect = 3.110e-38
Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPT 496
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I T
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITT 145
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Mouse
Match: Mrto4 (mRNA turnover 4, ribosome maturation factor [Source:MGI Symbol;Acc:MGI:1917152])

HSP 1 Score: 56.225 bits (134), Expect = 1.169e-8
Identity = 38/168 (22.62%), Postives = 84/168 (50.00%), Query Frame = 2 
Query:  107 KLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEF----VKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQV-PKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQML 595
            +L+   + Y  +FI +  N+ + ++++IR   +  + +  GKN +M   + ++   + E+     ++   L+G VG +FTN    EV +          A+A   A ++V + P  L           + L +PT + +G + +++D ++ KEGD++   +A++L++ 
Sbjct:   29 ELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRS--PSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARILKLF 193
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Mouse
Match: Mrto4 (mRNA turnover 4, ribosome maturation factor [Source:MGI Symbol;Acc:MGI:1917152])

HSP 1 Score: 55.0694 bits (131), Expect = 2.834e-8
Identity = 38/165 (23.03%), Postives = 82/165 (49.70%), Query Frame = 2 
Query:  107 KLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEF----VKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQV-PKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLL 586
            +L+   + Y  +FI +  N+ + ++++IR   +  + +  GKN +M   + ++   + E+     ++   L+G VG +FTN    EV +          A+A   A ++V + P  L           + L +PT + +G + +++D ++ KEGD++   +A++L
Sbjct:   29 ELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRS--PSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARIL 190
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. UniProt/SwissProt
Match: sp|P19889|RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster OX=7227 GN=RpLP0 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.454e-77
Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K  Y  K+   F+++ K FIV ADNV S+QMQNIR  LRG A +++GKNT+M+  I  +  + P+  KL PH+KGNVGFVFT GDL EV+D +L  K++APA+  A+AP+ V +P Q T LGPEKTSFFQAL IPTKI++GTIEIINDV ++K GD V  SEA LL ML I PF+ G
Sbjct:   10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 105.916 bits (263), Expect = 5.454e-77
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF YGL + Q+Y++GS +SPE LDI  ED+   F +GV  +AAV L++  PT+AS PH IAN  K+++A++  +E   KEA  IKEY+ DPSKF
Sbjct:  182 PFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. UniProt/SwissProt
Match: sp|Q9U3U0|RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata OX=7213 GN=RpLP0 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 3.304e-76
Identity = 102/177 (57.63%), Postives = 128/177 (72.32%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K  Y  K+   F++Y K FIV ADNV S+QMQNIR  LRG   +++GKNT+M+  I  +  +  +  KL PH+KGNVGFVFT GDL EV+D +L  K++APA+A A+AP+ V +P Q T LGPEKTSFFQAL IPTKI++GTIEIINDV ++K GD V  SEA LL ML I PF+ G
Sbjct:   10 KAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHLENNAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 104.375 bits (259), Expect = 3.304e-76
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF YGL I Q+Y++GS +SPE LDI  ED+   F  GV  +AAVSL +  PT+AS PH IAN  K+++A++  +E   K+A  IKE++ DPSKF
Sbjct:  182 PFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. UniProt/SwissProt
Match: sp|Q93572|RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans OX=6239 GN=rla-0 PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 4.683e-76
Identity = 97/177 (54.80%), Postives = 123/177 (69.49%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  KL   FE+Y K  +V  DNV S+QMQ IR+ +RG AEI++GKNT+++  +  +    P   KL PH+  NVGFVFT  DL E++  +L  +  APAKA A+AP  V++P Q T +GPEKTSFFQALQIPTKI RGTIEI+NDV LIKEGD V  SE+ LL ML + PF+ G
Sbjct:   10 KANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYG 186

HSP 2 Score: 110.538 bits (275), Expect = 4.683e-76
Identity = 47/94 (50.00%), Postives = 74/94 (78.72%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF YGL ++Q+Y++G+ Y+PE LD++ E++ K F+ GV+ VA+VSLA+N PTLASV H +AN +++M+ ++  ++ + KEAE IK ++ADPSKF
Sbjct:  182 PFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. UniProt/SwissProt
Match: sp|Q9DG68|RLA0_LITSY (60S acidic ribosomal protein P0 OS=Lithobates sylvaticus OX=45438 GN=RPLP0 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.681e-75
Identity = 101/177 (57.06%), Postives = 124/177 (70.06%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  +     KL PH+KGNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 109.768 bits (273), Expect = 1.681e-75
Identity = 48/94 (51.06%), Postives = 70/94 (74.47%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL IQQ+Y+NGS YSPE LDI+E+ +   F+EGV+ +A+V L +  PT+ASVPH + N  K ++AL+VE++Y+   A+ +K +LADPS F
Sbjct:  182 PFSFGLIIQQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLADPSAF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. UniProt/SwissProt
Match: sp|Q95140|RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus OX=9913 GN=RPLP0 PE=2 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 6.731e-73
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL E++D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 111.694 bits (278), Expect = 6.731e-73
Identity = 51/94 (54.26%), Postives = 69/94 (73.40%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL IQQ+++NGS Y+PE LDI+EE +   F+EGV+ VA+V L +  PT+ASVPH I N  K ++ALSVE++Y    AE +K +LADPS F
Sbjct:  182 PFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. TrEMBL
Match: A0A4E9EYX5 (60S acidic ribosomal protein P0 OS=Brugia malayi OX=6279 GN=Bma-rla-0 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.380e-81
Identity = 98/177 (55.37%), Postives = 129/177 (72.88%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    E+Y K FIV  DNV S+QMQ IR+ +RG A+I++GKNT+++  I  +  + P+  KL PH+ GNVGFVFTNGDL+E++  +L  +  APAKA A+AP  V++P Q T +GPEKTSFFQALQIPTKI+RGTIEI+N+V LIK G+ V  SE+ LL ML I PF+ G
Sbjct:   10 KANYFVKIVELLEEYPKCFIVGVDNVGSKQMQEIRQAMRGHADILMGKNTMIRKAIRGHLQTNPDLEKLLPHIVGNVGFVFTNGDLSEIRAKLLENRRGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKISRGTIEILNEVHLIKTGEKVGASESALLNMLNIMPFSYG 186

HSP 2 Score: 130.568 bits (327), Expect = 2.380e-81
Identity = 57/99 (57.58%), Postives = 80/99 (80.81%), Query Frame = 1 
Query:  601 LPFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAI 897
            +PF YGL ++Q+YENG+ ++PE LD++ +DI   F++GVQ VAAVSLA+  PTLAS+PH IAN  K+++A++VE+   MKEAE IKE+LADP+KFAA +
Sbjct:  181 MPFSYGLVVRQVYENGTVFAPEVLDMTPDDIRAKFLKGVQNVAAVSLAIGHPTLASIPHSIANAFKNLLAIAVEANIEMKEAEKIKEFLADPTKFAAPV 279
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. TrEMBL
Match: A0A0K0IYX6 (60S acidic ribosomal protein P0 OS=Brugia malayi OX=6279 GN=bma-rla-0 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.380e-81
Identity = 98/177 (55.37%), Postives = 129/177 (72.88%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    E+Y K FIV  DNV S+QMQ IR+ +RG A+I++GKNT+++  I  +  + P+  KL PH+ GNVGFVFTNGDL+E++  +L  +  APAKA A+AP  V++P Q T +GPEKTSFFQALQIPTKI+RGTIEI+N+V LIK G+ V  SE+ LL ML I PF+ G
Sbjct:   10 KANYFVKIVELLEEYPKCFIVGVDNVGSKQMQEIRQAMRGHADILMGKNTMIRKAIRGHLQTNPDLEKLLPHIVGNVGFVFTNGDLSEIRAKLLENRRGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKISRGTIEILNEVHLIKTGEKVGASESALLNMLNIMPFSYG 186

HSP 2 Score: 130.568 bits (327), Expect = 2.380e-81
Identity = 57/99 (57.58%), Postives = 80/99 (80.81%), Query Frame = 1 
Query:  601 LPFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAI 897
            +PF YGL ++Q+YENG+ ++PE LD++ +DI   F++GVQ VAAVSLA+  PTLAS+PH IAN  K+++A++VE+   MKEAE IKE+LADP+KFAA +
Sbjct:  181 MPFSYGLVVRQVYENGTVFAPEVLDMTPDDIRAKFLKGVQNVAAVSLAIGHPTLASIPHSIANAFKNLLAIAVEANIEMKEAEKIKEFLADPTKFAAPV 279
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. TrEMBL
Match: A0A4U5M0U7 (60S acidic ribosomal protein P0 OS=Steinernema carpocapsae OX=34508 GN=L596_028926 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.652e-81
Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  KL   F++Y K  IV  DNV S+QM  IR  +RG+AEI++GKNT+M+  I  +    P+  K+ PH+ GNVGFVFT  DL+E+++++L  K  APAKA A+AP  V +P Q T +GPEKTSFFQALQIPTKI+RGTIEI+N+V LIKEGD V  SE+ LL M+ I PF  G
Sbjct:   10 KANYFVKLIDLFKEYPKCLIVGVDNVGSKQMMEIRASMRGKAEILMGKNTMMRKAIRGHLQKNPDLEKILPHINGNVGFVFTKNDLSEIRNLLLENKRGAPAKAGAIAPCDVTIPPQNTGMGPEKTSFFQALQIPTKISRGTIEILNEVHLIKEGDKVGASESALLNMMNIQPFAYG 186

HSP 2 Score: 131.339 bits (329), Expect = 2.652e-81
Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDIGMGLFD 1008
            PF YGL +QQ+Y++G+ YSP  LD++ ED+   F+EGV+ +AA+SLA++RPTLAS PH++AN  K ++A++ E+E + KEAE +KEYLADPSKFA  +   +     A   E ++           SDIG+GLFD
Sbjct:  182 PFAYGLAVQQVYDSGALYSPAVLDMTTEDLRNRFLEGVRNIAALSLAVDRPTLASAPHIVANGFKRLMAIAAETEVSFKEAEKVKEYLADPSKFATTVSSNAAAPPAAPAAEESESD---------SDIGLGLFD 307
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. TrEMBL
Match: A0A4U5M0M9 (60S acidic ribosomal protein P0 OS=Steinernema carpocapsae OX=34508 GN=L596_028854 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.930e-81
Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  KL   F++Y K  IV  DNV S+QM  IR  +RG+AEI++GKNT+M+  I  +    P+  K+ PH+ GNVGFVFT  DL+E+++++L  K  APAKA A+AP  V +P Q T +GPEKTSFFQALQIPTKI+RGTIEI+N+V LIKEGD V  SE+ LL M+ I PF  G
Sbjct:   10 KANYFVKLIDLFKEYPKCLIVGVDNVGSKQMMEIRASMRGKAEILMGKNTMMRKAIRGHLQKNPDLEKILPHINGNVGFVFTKNDLSEIRNLLLENKRGAPAKAGAIAPCDVTIPPQNTGMGPEKTSFFQALQIPTKISRGTIEILNEVHLIKEGDKVGASESALLNMMNIQPFAYG 186

HSP 2 Score: 130.954 bits (328), Expect = 2.930e-81
Identity = 69/135 (51.11%), Postives = 96/135 (71.11%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDIGMGLFD 1008
            PF YGL +QQ+Y++G+ YSP  LD++ ED+   F+EGV+ +AA+SLA++RPTLAS PH++AN  K ++A++ E+E + KEAE +KEYLADPSKFA  +   +     A    AA  A  SES+   SDIG+GLFD
Sbjct:  182 PFAYGLAVQQVYDSGALYSPAVLDMTTEDLRNRFLEGVRNIAALSLAVDRPTLASAPHIVANGFKRLMAIAAETEVSFKEAEKVKEYLADPSKFATTVSSNAAATAAAATPSAAPAAEESESD---SDIGLGLFD 313
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. TrEMBL
Match: A0A0R3S1N2 (60S acidic ribosomal protein P0 OS=Elaeophora elaphi OX=1147741 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.727e-81
Identity = 98/177 (55.37%), Postives = 129/177 (72.88%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    E+Y K FIV  DNV S+QMQ IR+ +RG A+I++GKNT+++  I  +  + P+  KL PH+ GNVGFVFTNGDL+E++  +L  +  APAKA A+AP  V++P Q T +GPEKTSFFQALQIPTKI+RGTIEI+N+V LIK G+ V  SE+ LL ML I PF+ G
Sbjct:   10 KANYFVKIVELLEEYPKCFIVGVDNVGSKQMQEIRQAMRGHADILMGKNTMIRKAIRGHLQTNPDLEKLLPHIVGNVGFVFTNGDLSEIRAKLLENRRGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKISRGTIEILNEVHLIKTGEKVGASESALLNMLNIMPFSYG 186

HSP 2 Score: 129.798 bits (325), Expect = 3.727e-81
Identity = 58/95 (61.05%), Postives = 78/95 (82.11%), Query Frame = 1 
Query:  601 LPFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            +PF YGL ++Q+YENG+ ++PE LD++ +DI   FM+GVQ VAA+SLA+  PTLASVPH IAN +K+++A++VE+   MKEAE IKEYLADPSKF
Sbjct:  181 MPFSYGLVVRQVYENGTVFAPEVLDMTPDDIRAKFMKGVQNVAAISLAIGYPTLASVPHSIANALKNLLAIAVEANVEMKEAEKIKEYLADPSKF 275
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Cavefish
Match: rplp0 (ribosomal protein, large, P0 [Source:NCBI gene;Acc:58101])

HSP 1 Score: 183.726 bits (465), Expect = 2.222e-68
Identity = 100/177 (56.50%), Postives = 124/177 (70.06%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+      Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL PH++GNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI+++V LIK GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPSLEKLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSNVQLIKPGDKVGASEATLLNMLNISPFSYG 186

HSP 2 Score: 95.5153 bits (236), Expect = 2.222e-68
Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIK 858
            PF YGL IQQ+Y+NGS YSPE LDI+E+ + K F+EGV+ +A+V L +  PTLAS+PH + N  K ++A++VE++ +   A+ +K
Sbjct:  182 PFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHSVINGYKRVLAVAVETDISFPLADKVK 266
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Cavefish
Match: mrto4 (MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:103032884])

HSP 1 Score: 59.6918 bits (143), Expect = 5.791e-10
Identity = 48/196 (24.49%), Postives = 99/196 (50.51%), Query Frame = 2 
Query:   80 LQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSA--PEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPK----QLT-TLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG*KFNRSMKM 646
            L+ K +   +L+   + Y  +FI + +N+ + ++++IR   +  +    GKN +M   + K           ++   L+G VG +FTN    EV++   + K    A++  +A ++V + +    Q T ++ P+     + L +PT + +G + +I D ++ KEGD +   +A++   LK++ F M  +F  S+K 
Sbjct:   26 LEAKQNLIEELRKCVDTYRYVFIFSVENMRNNKLKDIRAAWK-HSRFFFGKNKVMMIALGKGPTDEYKDNLHRVSKFLRGEVGVLFTNKTKEEVQEYFNSFKEVDYARSGNVAQMAVTLDEGPLEQFTHSMEPQ----LRQLGLPTALKKGVVTLIKDYEVCKEGDTLTPEQARI---LKLFGFEMA-EFKLSIKC 212
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Cavefish
Match: mrto4 (MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:103032884])

HSP 1 Score: 59.3066 bits (142), Expect = 7.547e-10
Identity = 48/196 (24.49%), Postives = 99/196 (50.51%), Query Frame = 2 
Query:   80 LQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSA--PEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPK----QLT-TLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG*KFNRSMKM 646
            L+ K +   +L+   + Y  +FI + +N+ + ++++IR   +  +    GKN +M   + K           ++   L+G VG +FTN    EV++   + K    A++  +A ++V + +    Q T ++ P+     + L +PT + +G + +I D ++ KEGD +   +A++   LK++ F M  +F  S+K 
Sbjct:   20 LEAKQNLIEELRKCVDTYRYVFIFSVENMRNNKLKDIRAAWK-HSRFFFGKNKVMMIALGKGPTDEYKDNLHRVSKFLRGEVGVLFTNKTKEEVQEYFNSFKEVDYARSGNVAQMAVTLDEGPLEQFTHSMEPQ----LRQLGLPTALKKGVVTLIKDYEVCKEGDTLTPEQARI---LKLFGFEMA-EFKLSIKC 206
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Sea Lamprey
Match: rplp0 (ribosomal protein, large, P0 [Source:NCBI gene;Acc:58101])

HSP 1 Score: 191.43 bits (485), Expect = 4.275e-76
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    E + K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +    P   ++ P+++GNVGFVFT  DL E++D++LA K+ A A+A  LAP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF  G
Sbjct:   10 KSNYFLKIIQLLEDFPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEKNPALERVLPYIRGNVGFVFTKEDLAEIRDMLLANKVPASARAGGLAPCDVMVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKAGDKVGASEATLLNMLNISPFTFG 186

HSP 2 Score: 111.309 bits (277), Expect = 4.275e-76
Identity = 48/96 (50.00%), Postives = 70/96 (72.92%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAA 891
            PF +GL I Q+Y+NGS YSP+ LDI+E+D+ K F+EGV+ VA+V L +  PT+AS+PH I N  K ++A++VE+ Y+   A+ +K +LADPS F  
Sbjct:  182 PFTFGLHILQVYDNGSIYSPDVLDITEDDLRKRFLEGVRNVASVCLQIGYPTVASIPHSIVNGYKRVLAIAVETNYSFPLADKVKAFLADPSAFVT 277
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Sea Lamprey
Match: rplp0 (ribosomal protein, large, P0 [Source:NCBI gene;Acc:58101])

HSP 1 Score: 111.694 bits (278), Expect = 1.545e-30
Identity = 48/96 (50.00%), Postives = 70/96 (72.92%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAA 891
            PF +GL I Q+Y+NGS YSP+ LDI+E+D+ K F+EGV+ VA+V L +  PT+AS+PH I N  K ++A++VE+ Y+   A+ +K +LADPS F  
Sbjct:   29 PFTFGLHILQVYDNGSIYSPDVLDITEDDLRKRFLEGVRNVASVCLQIGYPTVASIPHSIVNGYKRVLAIAVETNYSFPLADKVKAFLADPSAFVT 124

HSP 2 Score: 38.1206 bits (87), Expect = 1.545e-30
Identity = 19/31 (61.29%), Postives = 20/31 (64.52%), Query Frame = 2 
Query:  527 NDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            +DV LIK GD V  SEA LL ML I PF  G
Sbjct:    3 SDVQLIKAGDKVGASEATLLNMLNISPFTFG 33
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Yeast
Match: RPP0 (Conserved ribosomal protein P0 of the ribosomal stalk; involved in interaction between translational elongation factors and the ribosome; phosphorylated on serine 302; homologous to mammalian ribosomal protein LP0 and bacterial L10 [Source:SGD;Acc:S000004332])

HSP 1 Score: 165.236 bits (417), Expect = 1.321e-58
Identity = 90/181 (49.72%), Postives = 126/181 (69.61%), Query Frame = 2 
Query:   77 VLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            + +KK +Y AKL+   E+Y  +F+V  DNV+SQQM  +RK LRG+A +++GKNT+++  I       P+F KL P +KGNVGFVFTN  L E+K++I++ ++ APA+A A+AP  + V    T + P KTSFFQAL +PTKI RGTIEI++DV ++  G+ V QSEA LL +L I PF  G
Sbjct:    4 IREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFG 184

HSP 2 Score: 78.1814 bits (191), Expect = 1.321e-58
Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKF 885
            PF +GL + Q+Y+NG  +    LDI++E+++  F+  V  +A++SLA+  PTL SV H + N  K ++A+++ + Y+  E E + + + +P K+
Sbjct:  180 PFTFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKY 273
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Yeast
Match: YLR339C_mRNA (Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPP0 [Source:SGD;Acc:S000004331])

HSP 1 Score: 75.0998 bits (183), Expect = 1.418e-16
Identity = 63/146 (43.15%), Postives = 71/146 (48.63%), Query Frame = -2 
Query:   79 MVPLVIFVGI*RAWKNEVFSGPKVVNCLGTCTLTGANXXXXXXXXXXXAKIISLTSFKSPFVKTKPTFPLR*GNNFTNSGADNLFLLITNFINVFFPKTISACPLNNLRIFCIC*LATLSALTINIL*YCSNLVFNFAA*SIFFCK 516
            MVPL I VG  +AWK EV  G   V    T   +GA A ALAGA      I  L S     VKTKPT PL  GNNF+ SG  +   L+     VF P   +A PLN+    CIC   TLS  T N   Y S    N A  S FF +
Sbjct:    1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAKYSAFFSR 146
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Nematostella
Match: EDO34194 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ36])

HSP 1 Score: 196.052 bits (497), Expect = 1.521e-72
Identity = 98/177 (55.37%), Postives = 127/177 (71.75%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    ++Y K+F+V  DNV S+QMQ IR+ LRGQ E+++GKNT+++  I  +  + P+  KL PH+KGN+GFVFT  DL +V+ II+  K+ APAKA  +AP+ V VP   T LGPEKTSFFQAL IPTKI RGTIEIINDV LIK+ + V  SE+ LL MLKI PF+ G
Sbjct:   10 KSNYFLKIIQYLDEYPKLFLVGVDNVGSKQMQTIRQSLRGQGEVLMGKNTMIRKAIRGHLENNPDLEKLLPHIKGNIGFVFTKEDLADVRKIIMENKVAAPAKAGVIAPIDVFVPAGNTGLGPEKTSFFQALAIPTKIARGTIEIINDVHLIKKDEKVGASESTLLNMLKISPFSYG 186

HSP 2 Score: 95.1301 bits (235), Expect = 1.521e-72
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPS 879
            PF YGL+I Q+YE+GS Y P  LDI+ +DI+  F  G+  VA+V L +  PT+ SVPH I N  K++ A++VE++    + E +K +LADPS
Sbjct:  182 PFSYGLQICQVYESGSVYDPSVLDITNDDILARFRMGIANVASVCLEIGYPTVVSVPHSIINGFKNIAAVAVETDIEFPQVEKLKAFLADPS 273
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Nematostella
Match: EDO30123 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T1P1])

HSP 1 Score: 52.373 bits (124), Expect = 4.624e-8
Identity = 40/183 (21.86%), Postives = 85/183 (46.45%), Query Frame = 2 
Query:   68 KKMVLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPE------FVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTS-FFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQML 595
            KK  L+ K     +++   ++Y  +++ + +N+ + ++++ R+  + Q+    GKN +M   + K     PE        ++   LKG  G +FTN   ++V            A+A   A    Q+        P  T    + L +PT + +G + +++D  + KEGD++   +A++L++ 
Sbjct:   16 KKKGLELKSGLVKEVQECVDEYAFVYVFSVENMRNSKLKDAREKWK-QSRFFFGKNKVMAIALGK----TPEDEYKENLCEVSKRLKGQCGLLFTNQSKDDVTSWFKEYSEMDFARAGNKAICDFQLDAGPLDQFPHSTEPNLRQLGLPTALKKGVVTLLSDHTVCKEGDVLTPEQARILKLF 193
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Medaka
Match: rplp0 (ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:101155762])

HSP 1 Score: 182.956 bits (463), Expect = 2.237e-71
Identity = 100/177 (56.50%), Postives = 124/177 (70.06%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG 619
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL  H+KGNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LI+ GD V  SEA LL ML I PF+ G
Sbjct:   10 KSNYFIKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLTHIKGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVGLIRTGDKVGASEATLLNMLNISPFSFG 186

HSP 2 Score: 106.301 bits (264), Expect = 2.237e-71
Identity = 46/90 (51.11%), Postives = 67/90 (74.44%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLAD 873
            PF +GL IQQ+Y+NGS YSPE LDI+E  +   F+EGV+ +A+VSL +  PTLAS+PH + N  K ++A++VE++Y   +AE +K +LAD
Sbjct:  182 PFSFGLIIQQVYDNGSVYSPEVLDITEASLQARFLEGVRNIASVSLEIGYPTLASIPHSVINGYKRVLAVAVETDYTFPQAEKVKAFLAD 271
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Medaka
Match: rplp0 (ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:101155762])

HSP 1 Score: 161.384 bits (407), Expect = 3.331e-61
Identity = 88/156 (56.41%), Postives = 111/156 (71.15%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGD 556
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL  H+KGNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI++DV LI+ GD
Sbjct:   10 KSNYFIKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLTHIKGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVGLIRTGD 165

HSP 2 Score: 93.5893 bits (231), Expect = 3.331e-61
Identity = 40/82 (48.78%), Postives = 61/82 (74.39%), Query Frame = 1 
Query:  628 QQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLAD 873
            +Q+Y+NGS YSPE LDI+E  +   F+EGV+ +A+VSL +  PTLAS+PH + N  K ++A++VE++Y   +AE +K +LAD
Sbjct:  166 KQVYDNGSVYSPEVLDITEASLQARFLEGVRNIASVSLEIGYPTLASIPHSVINGYKRVLAVAVETDYTFPQAEKVKAFLAD 247
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Medaka
Match: rplp0 (ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:101155762])

HSP 1 Score: 148.673 bits (374), Expect = 1.957e-42
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 2 
Query:   89 KIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIIN 529
            K +Y  K+    + Y K FIV ADNV S+QMQ IR  LRG+A +++GKNT+M+  I  +  + P   KL  H+KGNVGFVFT  DL EV+D++LA K+ A A+A A+AP  V VP Q T LGPEKTSFFQAL I TKI+RGTIEI+ 
Sbjct:   10 KSNYFIKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLTHIKGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILG 156

HSP 2 Score: 60.4622 bits (145), Expect = 3.268e-10
Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 1 
Query:  664 EALDISEEDIMKGFME--GVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLAD 873
            +AL I+ + I +G +E  GV+ +A+VSL +  PTLAS+PH + N  K ++A++VE++Y   +AE +K +LAD
Sbjct:  139 QALGITTK-ISRGTIEILGVRNIASVSLEIGYPTLASIPHSVINGYKRVLAVAVETDYTFPQAEKVKAFLAD 209
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Medaka
Match: mrto4 (MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:101175392])

HSP 1 Score: 58.5362 bits (140), Expect = 1.557e-9
Identity = 45/179 (25.14%), Postives = 88/179 (49.16%), Query Frame = 2 
Query:   80 LQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEF----VKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTS-FFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKI 601
            L+ K     +L+   + Y  +FI + +N+ + ++++IR   +  +    GKN +M  ++   K S  E+     K+   L+G VG +FTN   +EV +     K    A+A   A + V + +      P       + L +PT + +G + ++ D ++ KEGDI+   +A++L++  I
Sbjct:   20 LESKQKLIEELRKCVDTYRNLFIFSVENMRNNKLKDIRTAWK-HSRFFFGKNKVM--IVALGKGSPDEYKDNLHKVSKFLRGEVGVLFTNKTKDEVYEYFSHFKEMDFARAGNQAQMDVTLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDYEVCKEGDILTPEQARILKLFAI 195
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Planmine SMEST
Match: SMESG000049529.1 (SMESG000049529.1)

HSP 1 Score: 362.844 bits (930), Expect = 2.182e-125
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 2 
Query:   74 MVLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG*KFNR 634
            MVLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPF  G K  +
Sbjct:    1 MVLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFQYGLKIQQ 187

HSP 2 Score: 213.386 bits (542), Expect = 7.595e-67
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 1 
Query:  604 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDIGMGLFD 1008
            PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSL+LNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAIVV SPVEVKAEVKEAAKVASSSESEEEGSDIGMGLFD
Sbjct:  178 PFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLSLNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAIVVTSPVEVKAEVKEAAKVASSSESEEEGSDIGMGLFD 312
[Close]
BLAST of 60S acidic ribosomal protein P0 vs. Planmine SMEST
Match: SMESG000079482.1 (SMESG000079482.1)

HSP 1 Score: 313.153 bits (801), Expect = 7.435e-106
Identity = 155/187 (82.89%), Postives = 169/187 (90.37%), Query Frame = 2 
Query:   74 MVLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIVLGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILAQKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG*KFNR 634
            MV+QKKI+YA KL+TKF QY KIFIVNADNV+SQQ+QN+RK LR  AEIVLGKNT+MKFVI KNK S P+ +KLFPHLKGNVGFVFTNGDLN VKDI+L+QKIQAPAKADA+APVSV VPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIK GDIVKQSEAQLLQMLKI+PF  G K  +
Sbjct:    1 MVIQKKINYAEKLRTKFAQYEKIFIVNADNVSSQQLQNVRKELRSTAEIVLGKNTMMKFVITKNKASNPDLLKLFPHLKGNVGFVFTNGDLNGVKDILLSQKIQAPAKADAIAPVSVMVPKQLTTLGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKIQQ 187

HSP 2 Score: 161.384 bits (407), Expect = 8.054e-47
Identity = 88/136 (64.71%), Postives = 106/136 (77.94%), Query Frame = 1 
Query:  601 LPFQYGLKIQQIYENGSCYSPEALDISEEDIMKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKEAEGIKEYLADPSKFAAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDIGMGLFD 1008
             PFQYGLKIQQIYENGSCYSP+ALDI+E+DI++GFME  QKVAAVSLA+N+PTLAS+PH+IANTIK++I L+V ++Y++KEA  IKEYL DP+KFA A  VA             + A    SE EGSDIGMGLFD
Sbjct:  177 FPFQYGLKIQQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLAINKPTLASIPHIIANTIKAVIGLAVVTDYDLKEAADIKEYLKDPTKFATA-TVAVATTAAPAKPVQQEAAKEESSESEGSDIGMGLFD 311
The following BLAST results are available for this feature:
BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPLP01.570e-7356.50ribosomal protein lateral stalk subunit P0 [Source... [more]
RPLP01.570e-7356.50ribosomal protein lateral stalk subunit P0 [Source... [more]
RPLP01.570e-7356.50ribosomal protein lateral stalk subunit P0 [Source... [more]
RPLP01.971e-6456.50ribosomal protein lateral stalk subunit P0 [Source... [more]
RPLP04.286e-6258.78ribosomal protein lateral stalk subunit P0 [Source... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rla-04.638e-7754.8060S acidic ribosomal protein P0 [Source:UniProtKB... [more]
F10E7.58.097e-824.28Ribosome assembly factor mrt4 [Source:UniProtKB/T... [more]
F10E7.58.097e-824.28Ribosome assembly factor mrt4 [Source:UniProtKB/T... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpLP07.298e-7857.63gene:FBgn0000100 transcript:FBtr0334113[more]
RpLP07.298e-7857.63gene:FBgn0000100 transcript:FBtr0078481[more]
RpLP0-like4.610e-1123.90gene:FBgn0033485 transcript:FBtr0088425[more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rplp05.341e-7456.50ribosomal protein, large, P0 [Source:NCBI gene;Acc... [more]
rplp01.987e-4455.48ribosomal protein, large, P0 [Source:NCBI gene;Acc... [more]
mrto42.237e-925.00MRT4 homolog, ribosome maturation factor [Source:Z... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
septin31.829e-7557.06septin 3 [Source:Xenbase;Acc:XB-GENE-1002286][more]
septin33.303e-6149.15septin 3 [Source:Xenbase;Acc:XB-GENE-1002286][more]
septin33.607e-4755.78septin 3 [Source:Xenbase;Acc:XB-GENE-1002286][more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rplp06.346e-7356.50ribosomal protein, large, P0 [Source:MGI Symbol;Ac... [more]
Rplp07.207e-6158.50ribosomal protein, large, P0 [Source:MGI Symbol;Ac... [more]
Rplp03.110e-3853.68ribosomal protein, large, P0 [Source:MGI Symbol;Ac... [more]
Mrto41.169e-822.62mRNA turnover 4, ribosome maturation factor [Sourc... [more]
Mrto42.834e-823.03mRNA turnover 4, ribosome maturation factor [Sourc... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P19889|RLA0_DROME5.454e-7757.6360S acidic ribosomal protein P0 OS=Drosophila mela... [more]
sp|Q9U3U0|RLA0_CERCA3.304e-7657.6360S acidic ribosomal protein P0 OS=Ceratitis capit... [more]
sp|Q93572|RLA0_CAEEL4.683e-7654.8060S acidic ribosomal protein P0 OS=Caenorhabditis ... [more]
sp|Q9DG68|RLA0_LITSY1.681e-7557.0660S acidic ribosomal protein P0 OS=Lithobates sylv... [more]
sp|Q95140|RLA0_BOVIN6.731e-7356.5060S acidic ribosomal protein P0 OS=Bos taurus OX=9... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E9EYX52.380e-8155.3760S acidic ribosomal protein P0 OS=Brugia malayi O... [more]
A0A0K0IYX62.380e-8155.3760S acidic ribosomal protein P0 OS=Brugia malayi O... [more]
A0A4U5M0U72.652e-8155.3760S acidic ribosomal protein P0 OS=Steinernema car... [more]
A0A4U5M0M92.930e-8155.3760S acidic ribosomal protein P0 OS=Steinernema car... [more]
A0A0R3S1N23.727e-8155.3760S acidic ribosomal protein P0 OS=Elaeophora elap... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rplp02.222e-6856.50ribosomal protein, large, P0 [Source:NCBI gene;Acc... [more]
mrto45.791e-1024.49MRT4 homolog, ribosome maturation factor [Source:N... [more]
mrto47.547e-1024.49MRT4 homolog, ribosome maturation factor [Source:N... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rplp04.275e-7654.80ribosomal protein, large, P0 [Source:NCBI gene;Acc... [more]
rplp01.545e-3050.00ribosomal protein, large, P0 [Source:NCBI gene;Acc... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPP01.321e-5849.72Conserved ribosomal protein P0 of the ribosomal st... [more]
YLR339C_mRNA1.418e-1643.15Dubious open reading frame; unlikely to encode a f... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO341941.521e-7255.37Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO301234.624e-821.86Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
rplp02.237e-7156.50ribosomal protein lateral stalk subunit P0 [Source... [more]
rplp03.331e-6156.41ribosomal protein lateral stalk subunit P0 [Source... [more]
rplp01.957e-4255.78ribosomal protein lateral stalk subunit P0 [Source... [more]
mrto41.557e-925.14MRT4 homolog, ribosome maturation factor [Source:N... [more]
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BLAST of 60S acidic ribosomal protein P0 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000049529.12.182e-12596.79SMESG000049529.1[more]
SMESG000079482.17.435e-10682.89SMESG000079482.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30013796 ID=SMED30013796|Name=60S acidic ribosomal protein P0|organism=Schmidtea mediterranea sexual|type=transcript|length=1036bp
CAATTATAATTAACAGTGAATAAAAGTTTGTTTAAATTTATTATAAGTCC
TAAAAACAGTAAATTTTAAAAAAATGGTTTTGCAAAAGAAGATCGATTAT
GCGGCAAAATTGAAAACTAAATTTGAACAATATCACAAGATATTTATTGT
CAATGCTGATAATGTTGCCAGTCAGCAAATGCAAAATATCCGTAAATTGT
TGAGAGGACAAGCTGAAATTGTTTTAGGAAAAAATACATTAATGAAATTT
GTTATTAACAAAAATAAGTTATCAGCCCCTGAATTTGTGAAATTATTTCC
TCACCTTAAAGGAAATGTTGGTTTTGTTTTTACAAATGGTGACTTGAATG
AGGTTAAAGATATTATCTTGGCTCAAAAAATTCAAGCCCCAGCTAAAGCT
GATGCGTTGGCACCAGTTAGTGTACAAGTACCTAAACAATTGACAACTTT
AGGCCCGGAGAAGACTTCATTTTTCCAAGCTCTTCAAATTCCAACAAAGA
TTACCAGAGGTACCATTGAAATCATCAATGATGTAGATTTGATCAAAGAA
GGAGATATTGTTAAACAATCAGAAGCTCAACTTCTTCAGATGTTGAAAAT
TTACCCTTTCAATATGGGTTGAAAATTCAACAGATCTATGAAAATGGATC
ATGCTACAGTCCAGAAGCTTTGGATATCAGCGAAGAAGATATCATGAAAG
GATTCATGGAGGGTGTTCAAAAGGTTGCTGCTGTATCTTTGGCTCTTAAC
AGACCAACTTTGGCTTCAGTGCCCCACTTGATTGCCAACACAATCAAATC
TATGATTGCATTGTCAGTTGAATCTGAATATAACATGAAAGAAGCTGAAG
GTATTAAAGAATATTTGGCTGATCCATCAAAATTCGCAGCTGCCATTGTT
GTTGCATCACCCGTTGAAGTAAAGGCTGAAGTTAAGGAAGCTGCTAAGGT
TGCATCTTCAAGTGAAAGCGAAGAAGAAGGAAGTGATATTGGAATGGGTC
TTTTCGATTAGTTTGAAAATGTAATAAAATTTGGAT
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protein sequence of SMED30013796-orf-1

>SMED30013796-orf-1 ID=SMED30013796-orf-1|Name=SMED30013796-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=183bp
MVLQKKIDYAAKLKTKFEQYHKIFIVNADNVASQQMQNIRKLLRGQAEIV
LGKNTLMKFVINKNKLSAPEFVKLFPHLKGNVGFVFTNGDLNEVKDIILA
QKIQAPAKADALAPVSVQVPKQLTTLGPEKTSFFQALQIPTKITRGTIEI
INDVDLIKEGDIVKQSEAQLLQMLKIYPFNMG*
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protein sequence of SMED30013796-orf-2

>SMED30013796-orf-2 ID=SMED30013796-orf-2|Name=SMED30013796-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=106bp
MKGFMEGVQKVAAVSLALNRPTLASVPHLIANTIKSMIALSVESEYNMKE
AEGIKEYLADPSKFAAAIVVASPVEVKAEVKEAAKVASSSESEEEGSDIG
MGLFD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR040637RL10P_insert
IPR043164RL10_insert_sf
IPR043141Ribosomal_L10-like_sf
IPR001790Ribosomal_L10P
Vocabulary: cellular component
TermDefinition
GO:0005622intracellular
GO:0005634nucleus
GO:0005737cytoplasm
GO:0005840ribosome
GO:0022625cytosolic large ribosomal subunit
GO:0022626cytosolic ribosome
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: biological process
TermDefinition
GO:0042254ribosome biogenesis
GO:0002181cytoplasmic translation
GO:0006281DNA repair
GO:0006974cellular response to DNA damage stimulus
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003906DNA-(apurinic or apyrimidinic site) lyase activity
GO:0016829lyase activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR04063760S ribosomal protein L10P, insertion domainPFAMPF17777RL10P_insertcoord: 107..176
e-value: 3.6E-17
score: 62.1
IPR04316450S ribosomal protein L10, insertion domain superfamilyGENE3DG3DSA:3.90.105.20coord: 103..181
e-value: 7.4E-60
score: 203.7
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 3..99
e-value: 4.7E-23
score: 81.2
IPR043141Ribosomal protein L10-like domain superfamilyGENE3DG3DSA:3.30.70.1730coord: 13..183
e-value: 7.4E-60
score: 203.7
IPR043141Ribosomal protein L10-like domain superfamilySUPERFAMILYSSF160369Ribosomal protein L10-likecoord: 1..127
NoneNo IPR availablePANTHERPTHR4569960S acidic ribosomal protein P0coord: 4..183
NoneNo IPR availablePANTHERPTHR45699:SF360S ACIDIC RIBOSOMAL PROTEIN P0coord: 4..183
NoneNo IPR availableCDDcd05795Ribosomal_P0_L10ecoord: 4..178
e-value: 3.61127E-77
score: 226.301