SMED30013794

Overview
NameSMED30013794
Smed IDSMED30013794
Length (bp)1015
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30013794

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 27

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30013794h1SMcG0009890 SmedASXL_004369SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30013794h1SMcG0009890 SmedASXL_017252SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30013794h1SMcG0009890 SmedASXL_017257SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30013794h1SMcG0009889 Contig19558newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013794h1SMcG0009889 Contig19558uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013794h1SMcG0009890 Contig53784newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013794h1SMcG0009890 Contig53784uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013794h1SMcG0009890 Contig19558newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30013794h1SMcG0009890 Contig19558uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
nervous systemSMED30013794h1SMcG0009890 dd_Smed_v4_13603_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30013794h1SMcG0009890 dd_Smed_v4_13603_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30013794h1SMcG0009890 dd_Smed_v4_13603_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30013794h1SMcG0009890 dd_Smed_v4_11640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30013794h1SMcG0009890 dd_Smed_v4_11640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30013794h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30013794h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30013794h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30013794h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30013794h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30013794h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30013794h1SMcG0009890 dd_Smed_v4_16650_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30013794h1SMcG0009890 dd_Smed_v4_16650_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30013794h1SMcG0009890 dd_Smed_v4_16650_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30013794h1SMcG0009890 dd_Smed_v6_9830_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
neoblastSMED30013794h1SMcG0009890 dd_Smed_v6_16650_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
reproductive organSMED30013794h1SMcG0009890 Contig53784newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30013794h1SMcG0009890 Contig53784uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30013794 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000055:313821..317499 -4894
v31.000055:316617..317864 +2358
v31.000055:316971..317899 -1871
Homology
[Close]
BLAST of SMED30013794 vs. Planmine SMEST
Match: SMESG000064314.1 (SMESG000064314.1)

HSP 1 Score: 399.823 bits (1026), Expect = 1.703e-126
Identity = 248/376 (65.96%), Postives = 280/376 (74.47%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVN------------------------------------VDQVSKDDESDHSVDPNKSEPGKSYINEIE-GEITHK-KINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVSKLDETDHSVD NES+P  SNI E+  GE    ++VN                                    +DQV+   ++DHSVDPNK +  +  INE++ GE   + ++N DEV KVD  + SVD NE E+ +PN+  +DE E NISE+SNV EL  ++E D S   N+ +LA+  IIEID+ + NI D VN+     VDE  HSA+ N++EPSE  INEVDE
Sbjct: 1782 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDE 2152

HSP 2 Score: 351.288 bits (900), Expect = 1.361e-109
Identity = 220/380 (57.89%), Postives = 272/380 (71.58%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEK-----------------------------------------DVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            E E AESNI+EVD+ E  Q+K  +L+EVS VD+TDHS D NES+ +  NI E+  GE+NIS++ N+++VS   E+D SVD N++EP +S IN++ E E T +++  +EV KV E                                          D+SVDPN+S+  EH I ++D+ EK     +N+D VSK++ETD + + NESEP  SNI E+  GE    ++VN+++VSK +E+D+S DPN SEP  S INE+ G++TH+K NL+EV K  EN+DSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE
Sbjct: 2630 ERESAESNIDEVDEEEITQEK-FNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEI-EGEITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSEPDDSNINELGGKMTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 3007

HSP 3 Score: 332.798 bits (852), Expect = 3.539e-103
Identity = 219/379 (57.78%), Postives = 259/379 (68.34%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQD-----------------------------------------NLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVD 1011
            ESE A SNINEV+K E KQQ+ ++ +E+S V + D+S + N+ +  E NI  VD  E+NI E+                                          NL EVS V E   S D NEN  TE    +VD  E  Q   +  E  K  E + SVD  E +  E NI +VDE+E  Q K  NL +VSK+DETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNE EIV+ NI+ ++EG+TN+SEESN+NE S IDE D SV PN+S+L+EHYIIEIDQ + NI+DPVN++E+SKV+E   +A+LNE+EP E NI EVD
Sbjct: 2467 ESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIEESYLKALSMIDGTKHSVDENEEELAELNIKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTEPITKEVDNIENIQTDYVKSEELKADETEYSVDQIERESAESNIDEVDEEEITQEK-FNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVD 2844

HSP 4 Score: 276.174 bits (705), Expect = 2.003e-83
Identity = 196/351 (55.84%), Postives = 245/351 (69.80%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDE-EETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVS----KDD------ESDHSVDPNKSEPGKSYINEI-EGEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            ESEP+E NINEVD+ E KQQ++ + EEV  V+K D+S D N+S+L E +IIE+D GE NI++  N++EVS V ETD + +LNE+EP ESNI +VDE E   QEQ+  EEVSKV EK  S D NES+ VE NIK V E E    ++ N+ ++SK+DE D SV  NES+ +   I EI QGE N++D V VD+ S    KDD      E+DHS D  + EP +S INE  E EIT +K NL+++ KV E +DS D NE E  +  I  +DEGE    E+ N  E+SK++E D S  PNES LAE+YI+EIDQ KNNITDPVNLNEISKVDE+ HSADLNENEPSE NINEVDE
Sbjct: 3076 ESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDE 3426

HSP 5 Score: 229.95 bits (585), Expect = 1.938e-67
Identity = 170/342 (49.71%), Postives = 231/342 (67.54%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDE-EETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEI-EGEITH-KKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            ES+P ESNI EVD  E  QQ++++ EEVSNVDKT HS D NES+LA QNII++D GE+NI     L++V+ +++TD SVD N+ +  E NIN+VD  E   QEQ+ S+EVSKV  KD SVD NES+  E N+ ++DE EK   ++ N+ ++  ++ETDHS D N+ E +   I EI + EKNI D+VNV      DE+DHS + NKSEP +S INE+ E +    KK++LD V KVD+ + S++ NE E+ + NI  +DE ET   E+ N  E+S +D  D S  PNE +LAE  IIE+D  K NI++ VNL+E+SKVDE     D NE+E +E NIN+VDE
Sbjct: 1944 ESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNI-----LDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVV-----DETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDE 2275

HSP 6 Score: 222.631 bits (566), Expect = 7.424e-65
Identity = 169/343 (49.27%), Postives = 225/343 (65.60%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQ-EQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIE---GEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            E E  ESNI  V++ +    ++ ++ E S +D+ D S D N+S+L+E  IIE+D  E+NIS+  N++EVS V ETD + +LNE+EP ESNI +VD  E  Q EQ+  EEVSKV E D S DPN S+  + NI ++    K  H++ NL+ VSK  E D SVDPNE E    NI  + +GE NIS++ NV+++SK DE D SV PN+S+  + YI EI+     IT   +NL+E+ KVDE   S D NE E  + NI  +DEGE    E+ N   +SK++E D S  PNE +LA+H I EIDQ +NNI D VN++E+SKVDEK HSAD  E+EPSE NINEVDE
Sbjct: 2750 EIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSEPDDSNINELGG--KMTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDP-VNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDE 3089

HSP 7 Score: 220.32 bits (560), Expect = 4.650e-64
Identity = 168/381 (44.09%), Postives = 234/381 (61.42%), Query Frame = 1 
Query:    4 SEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEI-EGEITHK-KINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEI-----------------------------------------DRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            SE +E  I E+D+ E+     ++++EVS V++TD +A+ NES+  E NI EVDVGE    EQ NLEEVS V E D S D N +EP +SNIN++  +  T E+   EEVSK  E D SVDPNE + V+ NIK +DE E    ++ N+ ++SK+DE D SV PNES+ +   I EI Q + NI+D VN++++SK DE  HS D N++EP +  INE+ EGE   + ++N + V KV+E ++S DPNE E+ Q NI  +D+GE NI++  NV+E+SK+DE                                          D S  PN+S+L E +IIEIDQ +NNI D VN++E+SKV+E  H+ +LNE+EP E NI EVDE
Sbjct: 2792 SELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSEPDDSNINELGGK-MTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDE 3171

HSP 8 Score: 219.55 bits (558), Expect = 1.052e-63
Identity = 171/342 (50.00%), Postives = 224/342 (65.50%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEET-TQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSE---PGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVD 1011
            ESE AESNI+EVD+ E KQ ++++ EEVSNVD TDHS + NE +LAEQNII VDV +RNISE+ NL+EVS V E D  VD NE+E  ESNIN VDE ET  QEQ+  EEVS V E + SV  NE+   E   K+VD  E  Q+   N  + SK+DETDHS+ PN+SEP+ SNIN++ + E    D+VN ++V +  E  +S DPN  E   P    ++E E  I  +  N+  +  VDE   S D  + E+ +PNI+ +DE E NI+ ++N+ E SK+D+ID SV  NE  L E    EID+++   TD V   E SK+DEK +SAD NE+EP+E NINEVD
Sbjct: 1454 ESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEES-NVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVD 1794

HSP 9 Score: 217.238 bits (552), Expect = 5.332e-63
Identity = 183/423 (43.26%), Postives = 237/423 (56.03%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLI------------------------------------------SEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD------------------------------------------VSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKK--INLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVD 1011
            ESE AESNI+EVD+ E KQ ++++ EEVSNVD TDHS + NE +LAEQNIIEVDV +RNISE+ NL+EVS V E D  VD NE+E  ESNIN VDE ET Q++ +                                          SEE SKV E D S+ PN+S+  E NI KVDE+E KQ +Q+N D                                          + K+ ET+HSVD NE E    NI EI + EKNISD+VNVD++SK DE DHS DPN+SE   S INE+  + T ++  +N  E+ +V E ++S +PN++E V+PNIK +DE E NI EES +  LS ID    SV  NE +LAE  I  +++ + ++    NL E+SKVDE  +S D NEN  +E    EVD
Sbjct: 2180 ESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVFELENSVILNENTLTEPIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQEQVNSDEVINVDVKDKSVNPDESELGEPNCIEIVEVDKNISEESNVKELLKVTETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIEESYLKALSMIDGTKHSVDENEEELAELNIKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTEPITKEVD 2602

HSP 10 Score: 204.527 bits (519), Expect = 1.439e-58
Identity = 176/442 (39.82%), Postives = 234/442 (52.94%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEE----------------------------------------VSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQ-INLD-VSKLDETDHSVDPNESEPSGSNINEIGQGEKNIS-------------------------------DKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEES-------------------------------NVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            ESEP+ES INEVD+ E KQQ++++ EEVS V++ D+S D NES LAE  I+E+D G+ NI++  NL E+S V E D S DLNENEP+ESNIN+VDE E  Q++ ++ E                                         SK+ EKD S DPN+S+  E NI  VDE+E KQ +Q  N +  SK+ E D+S DPNE+E    +I  I +GEKNIS                               D VN   VS  DE+DH+ D N+SEP +S  NE++ E  + +    E  KVDE ++S DP + E+V+P IK  + GE NIS ES                               N+ +LS++DEID SV  NE  L    +IE+D+ + N  +P NL E+SKVDE  HSA+ NE+E  E NI EVDE
Sbjct: 3331 ESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAESNINEFGGEMTNEKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSE----EESKVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSVNQMKCKIEERNITDDANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDE 3768

HSP 11 Score: 155.606 bits (392), Expect = 1.056e-41
Identity = 152/410 (37.07%), Postives = 210/410 (51.22%), Query Frame = 1 
Query:    1 ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQ--LISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEK----------------KQHK---------------QINL-DVSKLDETDHSVDPNESEPSGSNINEIGQ-----------------------------------GEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKI----NLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVD 1011
            E+EP+ESNINEVD+ E KQQ++++ E VS V++ D+S D +E + AE NI E   G    +E+ NL E S +FE D S D N++E  E NIN VDEEE  Q+Q     EE SKV EKD S DPNE++ VE +IK + E EK                KQH                 +N  DVS +DETDH+ D NESEP+ SN NE+ +                                   GEKNIS +  +  + K D+++HSV            N+++ +I  + I    NL ++ +VDE + SV+ NER +   N+  +D+G+ N  E +N+ E+SK+DEI  S  PNES+L E  I E+D+ + N    VN NE +               P E N NEVD
Sbjct: 3413 ENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAESNINEF--GGEMTNEKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSEEESKVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSV------------NQMKCKIEERNITDDANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQVNPNEST---------------PIECNTNEVD 3793

HSP 12 Score: 145.206 bits (365), Expect = 4.283e-38
Identity = 119/281 (42.35%), Postives = 178/281 (63.35%), Query Frame = 1 
Query:  178 ISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEI-EGEITH-KKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVD 1011
            ++E  NL  ++ + + D SVD  E+   E+ INK+DEE   Q+Q+  EEV KV E +  ++PN S+  +HNI KV+E+ KKQ +QINL+ V+ +DE D+SVD NE   +   + E+   E     +VN ++ SK DE+DHSVD N+SE  +S I+E+ EGE    +++N +EV  VD  + S +PNE E+ + NI  +D  + NISE+ N++E+SK+DEID+ V PNES+ AE  I ++D+ +    + VN  E+S V E  +S  LNEN  +E    EVD
Sbjct: 1310 VNETFNLYVMTKMDQKDNSVDPYESAHIEAKINKIDEETIKQKQVNLEEVPKVDETEEFINPNRSELADHNIIKVEEETKKQ-EQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVD 1589

HSP 13 Score: 136.346 bits (342), Expect = 4.770e-35
Identity = 102/234 (43.59%), Postives = 152/234 (64.96%), Query Frame = 1 
Query:  325 VSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNK---SEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            ++K+ +KD SVDP ES  +E  I K+DE+  KQ KQ+NL+ V K+DET+  ++PN SE +  NI ++ +  K   +++N+++V+  DE D+SVD N+   +EP    +  +E  I  +++N +E  K+DE + SVD NE E+ + NI  +DEGET   E+ N  E+S +D  D S  PNE +LAE  II +D  K NI++ VNL+E+SKVDE     D NE+E +E NIN+VDE
Sbjct: 1319 MTKMDQKDNSVDPYESAHIEAKINKIDEETIKQ-KQVNLEEVPKVDETEEFINPNRSELADHNIIKVEEETKK-QEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVEN-IQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDE 1549

HSP 14 Score: 117.087 bits (292), Expect = 1.522e-28
Identity = 135/372 (36.29%), Postives = 197/372 (52.96%), Query Frame = 1 
Query:    4 SEPAESNINEVDKAERKQQKK-IDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVF-------------------------------ETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPN-KSEPGKSYINEIEGEIT-HKKINLDEVPKVDENNDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE 1014
            SE AE NIN VD+ E KQQ++  + EE S V + D+S D NE++L E +I  +  GE+NISE+ N++E++ VF                               ETD + D NE+EP ESN N+VDEEE   E+      SKV EKD S DP +++ VE  IK  +  EK    +  L D+ K+D+T+HSV          N  +    E+NI+D  N+  +S+ DE DHSV+ N ++  G + I   +G+   H+  NL+E+ KVDE + S +PNE E+ + NI  +DEGETN  ++ N               PNES   E    E+D  +   T+ VNL E S VD+  +  D  E+  ++ ++N+V E
Sbjct: 3494 SELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSEE-----ESKVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSV----------NQMKCKIEERNITDDANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQVN---------------PNESTPIECNTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKESPFTKPDVNKVSE 3835

HSP 15 Score: 91.6633 bits (226), Expect = 5.519e-20
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1 
Query:   46 ERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDPNESEPSGSNINEIGQGEKN 540
            ER      +L ++S VD+ DHS +SNE  L   N+IEVD G++N  E  NLEE+S V E   S + NE+E  ESNI +VDE ET Q++               V+PNES  +E N  +VD  EK Q + +NL + S +D+ D+ VDP ES  +  ++N++ +GEKN
Sbjct: 3688 ERNITDDANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQK--------------QVNPNESTPIECNTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKESPFTKPDVNKVSEGEKN 3839
The following BLAST results are available for this feature:
BLAST of SMED30013794 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30013794 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000064314.11.703e-12665.96SMESG000064314.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30013794 ID=SMED30013794|Name=SMED30013794|organism=Schmidtea mediterranea sexual|type=transcript|length=1015bp
GAAAGTGAACCTGCTGAGTCTAATATTAATGAGGTCGATAAGGCAGAAAG
GAAACAACAGAAGAAAATTGATTTGGAAGAAGTTTCAAATGTTGATAAAA
CAGATCATTCTGCTGATTCAAATGAGAGTAAACTTGCTGAGCAGAATATC
ATTGAAGTCGATGTTGGTGAAAGAAATATATCCGAACAAGATAATTTGGA
AGAGGTGTCAAATGTATTTGAAACAGATCCTTCCGTCGATTTAAATGAAA
ATGAACCTACTGAATCTAATATCAACAAAGTCGATGAAGAAGAAACGACA
CAAGAGCAATTAATTTCGGAAGAGGTATCAAAGGTTGGTGAAAAAGATGT
TTCTGTTGATCCTAATGAAAGTGACTTTGTTGAGCATAATATCAAAAAGG
TCGACGAAGATGAAAAGAAACAACACAAACAAATTAATTTGGATGTGTCA
AAGCTGGATGAAACAGATCATTCTGTTGATCCAAATGAAAGTGAACCTTC
TGGGTCTAATATCAATGAAATCGGTCAAGGTGAAAAGAATATATCAGATA
AAGTTAATGTGGATCAGGTGTCAAAGGATGATGAATCAGATCATTCTGTT
GATCCAAATAAAAGTGAACCTGGTAAATCTTATATCAATGAAATTGAAGG
AGAAATTACACACAAAAAGATTAATTTGGACGAGGTACCAAAAGTTGATG
AAAATAATGATTCTGTTGATCCTAATGAAAGGGAAATTGTTCAACCTAAT
ATCAAATGTTTGGACGAAGGAGAAACGAATATATCCGAGGAATCAAATGT
AAACGAATTGTCAAAGATTGATGAAATAGATCGTTCTGTCTATCCAAATG
AAAGTAAACTTGCTGAGCATTATATCATCGAAATCGATCAAAGTAAAAAT
AATATAACAGATCCAGTTAATTTGAATGAGATTTCAAAGGTTGATGAAAA
AGGTCATTCTGCTGATCTAAATGAAAATGAACCTTCTGAGTATAATATCA
ATGAGGTTGATGAGG
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protein sequence of SMED30013794-orf-1

>SMED30013794-orf-1 ID=SMED30013794-orf-1|Name=SMED30013794-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=338bp
ESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNI
IEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETT
QEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLDVS
KLDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSV
DPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEREIVQPN
IKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKN
NITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDE
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0002089reproductive organ
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 244..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..285