Matrin-type domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30013766 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 14
Homology
BLAST of Matrin-type domain-containing protein vs. Ensembl Human
Match: ZMAT4 (zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]) HSP 1 Score: 60.8474 bits (146), Expect = 2.473e-10 Identity = 47/173 (27.17%), Postives = 66/173 (38.15%), Query Frame = 1 Query: 307 CLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDL----EFCRLCETPFSSKVAALQHYSGKKHKKNAENW-SSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMK 810 C CSA L + S ++HY S KH +K+ L ++ H G P K + +EN D+ + C LC F+S V A HY GK H K + P+K + + RC +C+V S Q H G KHQ +K Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPR-------------------------DGGCPAKRLR------------SENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 151
BLAST of Matrin-type domain-containing protein vs. Ensembl Human
Match: ZNF346 (zinc finger protein 346 [Source:HGNC Symbol;Acc:HGNC:16403]) HSP 1 Score: 62.7734 bits (151), Expect = 5.506e-10 Identity = 57/249 (22.89%), Postives = 96/249 (38.55%), Query Frame = 1 Query: 151 APPEDLSDEEIFDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIE----LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAP-------------------TKSSKIPFRELVKKFE-INENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFN--------PIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 A P + + F S ++P ++E S + +++I+ L +C C A+L + S L+HY S KH NK+ HG L K E +++++ S + P T + + ++ K E +++N +D + FC LC F+ V A QHY GKKH+K + C C ++ S Q + H +G KH+ Sbjct: 51 AQPVGREEAQFFPHSRTVIPILVLSETYS-------LCHPVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETL---KGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 289
BLAST of Matrin-type domain-containing protein vs. Ensembl Human
Match: ZNF346 (zinc finger protein 346 [Source:HGNC Symbol;Acc:HGNC:16403]) HSP 1 Score: 62.003 bits (149), Expect = 8.064e-10 Identity = 49/199 (24.62%), Postives = 77/199 (38.69%), Query Frame = 1 Query: 289 LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAP-------------------TKSSKIPFRELVKKFE-INENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFN--------PIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 L +C C A+L + S L+HY S KH NK+ HG L K E +++++ S + P T + + ++ K E +++N +D + FC LC F+ V A QHY GKKH+K + C C ++ S Q + H +G KH+ Sbjct: 69 LFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETL---KGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 264
BLAST of Matrin-type domain-containing protein vs. Ensembl Human
Match: ZMAT4 (zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]) HSP 1 Score: 55.4546 bits (132), Expect = 6.242e-8 Identity = 50/180 (27.78%), Postives = 70/180 (38.89%), Query Frame = 1 Query: 301 KKCLECSAILTTISSALSHYNSTKHQNKIALKF---LPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPI-KPIDT------KDDLRCDVCNVIGESAAQMETHFAGKKHQMKMK 810 K C C+ T+ A SHY H ++ L P T PLS + P TAP +S R+ + +C LC F++ + A QHY GKKHKKNA + + +D + + RC +C+V S Q H G KHQ +K Sbjct: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLK-------------PPRMDTAPVVASPYQRRDSDR--------------YCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDMGELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 227
BLAST of Matrin-type domain-containing protein vs. Ensembl Human
Match: ZNF346 (zinc finger protein 346 [Source:HGNC Symbol;Acc:HGNC:16403]) HSP 1 Score: 53.5286 bits (127), Expect = 4.306e-7 Identity = 61/278 (21.94%), Postives = 107/278 (38.49%), Query Frame = 1 Query: 289 LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTK---------------------DDLRCDVCNVIGESAAQMETHFAGKKH-----QMKMKAYLERVNAGAIAPPMSSRGF-CD-----FNNVEREEANPVDPTRFIQENILPKNLSGSFLN-PYEPEPQQFEDNYIDE 1023 L +C C A+L + S L+HY S KH NK+ HG L K E +++++ KSS+ + + C +C FSS V A HY GK H KN + ++ + + D C +C+ + H+ GKKH ++K+ A R+ A+ + +G+ C N++E+ +A+ + F +N PK ++ S P + +P Q + +++ Sbjct: 69 LFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETL---KGETKKLDSD--------------QKSSRSKDKN----------------QCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAH---VSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED 310
BLAST of Matrin-type domain-containing protein vs. Ensembl Zebrafish
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 65.855 bits (159), Expect = 2.223e-12 Identity = 51/167 (30.54%), Postives = 70/167 (41.92%), Query Frame = 1 Query: 307 CLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMK 804 C CSA L + S ++HY S KH NK+ L ++ H P+ G P K K+ + ++ ++++N + C LC F+S V A HY GK H K + P I K CDVC+V S AQ H G KHQ K Sbjct: 16 CKVCSAQLISESQRVAHYESRKHANKVRLYYMLH-----PVD--------------------GGCPAK--KLRTDDGSEEGDVDKN------KCCTLCNMSFTSAVVAQSHYQGKIHAKRLKLLLGEQPAITAKGLKRCYTCDVCSVTLNSVAQYHAHLQGSKHQNK 149
BLAST of Matrin-type domain-containing protein vs. Ensembl Zebrafish
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 65.855 bits (159), Expect = 2.223e-12 Identity = 51/167 (30.54%), Postives = 70/167 (41.92%), Query Frame = 1 Query: 307 CLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMK 804 C CSA L + S ++HY S KH NK+ L ++ H P+ G P K K+ + ++ ++++N + C LC F+S V A HY GK H K + P I K CDVC+V S AQ H G KHQ K Sbjct: 16 CKVCSAQLISESQRVAHYESRKHANKVRLYYMLH-----PVD--------------------GGCPAK--KLRTDDGSEEGDVDKN------KCCTLCNMSFTSAVVAQSHYQGKIHAKRLKLLLGEQPAITAKGLKRCYTCDVCSVTLNSVAQYHAHLQGSKHQNK 149
BLAST of Matrin-type domain-containing protein vs. Ensembl Zebrafish
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 66.2402 bits (160), Expect = 5.567e-12 Identity = 61/199 (30.65%), Postives = 83/199 (41.71%), Query Frame = 1 Query: 307 CLECSAILTTISSALSHYNSTKHQNKIALKFLPH----GTYNLPLSKEEIREIETGVNKS---------------GEPNAPGTAPTKSSKIPFRELVKKFEINE-------NVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPI-KPIDT------KDDLRCDVCNVIGESAAQMETHFAGKKHQMK 804 C CSA L + S ++HY S KH NK+ L ++ H G L ++ E E V+K+ + + G K K+ E K +E H+ +C+LC F++ A QHY GKKHKKNA + K +D K CDVC+V S AQ H G KHQ K Sbjct: 16 CKVCSAQLISESQRVAHYESRKHANKVRLYYMLHPVDGGCPAKKLRTDDGSE-EGDVDKNKCCTLCNMSFTSAVVAQSHYQGKIHAKRLKLLLGEHPVKTASSEVSPVSSARQHRDSDRYCQLCNAWFNNPGMAQQHYDGKKHKKNAARADLLEQLGKTLDMGEMKGLKRCYTCDVCSVTLNSVAQYHAHLQGSKHQNK 213
BLAST of Matrin-type domain-containing protein vs. Ensembl Zebrafish
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:560756]) HSP 1 Score: 66.6254 bits (161), Expect = 1.428e-11 Identity = 60/228 (26.32%), Postives = 89/228 (39.04%), Query Frame = 1 Query: 286 ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRE-LVKKFEINENVHKLDLE----------------------------------FCRLCETPFSSKVAALQHYSGKKHKKNAEN---WSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPP 852 +L +C CSA+L + S L+HY S KH +K+ HG+ P++K R +G ++S + F +V + VH +L FC +C+ F++ + A QHYSGKKHKK+ +F P P T C VCN+ S Q + H +G KH+ K + A APP Sbjct: 58 DLFSDSQCKVCSAVLISESQKLAHYQSKKHASKVRRYMSIHGS-EEPIAK---RFKPSGDDQSNVDEKDKYKACSVCNMTFSSPVVAQSHYQGKVHSKNLRMQSIGSQTPALPQPKAQAKKDDGMQGPAEQDPNRFCSICQASFNNPLMAQQHYSGKKHKKHMNKQKLMETFGPSTAPASTVKGYPCTVCNIELNSVEQYQAHISGSKHKNHAKP---KKGPNAFAPP 278
BLAST of Matrin-type domain-containing protein vs. Ensembl Zebrafish
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:560756]) HSP 1 Score: 66.6254 bits (161), Expect = 1.535e-11 Identity = 60/228 (26.32%), Postives = 89/228 (39.04%), Query Frame = 1 Query: 286 ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRE-LVKKFEINENVHKLDLE----------------------------------FCRLCETPFSSKVAALQHYSGKKHKKNAEN---WSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPP 852 +L +C CSA+L + S L+HY S KH +K+ HG+ P++K R +G ++S + F +V + VH +L FC +C+ F++ + A QHYSGKKHKK+ +F P P T C VCN+ S Q + H +G KH+ K + A APP Sbjct: 50 DLFSDSQCKVCSAVLISESQKLAHYQSKKHASKVRRYMSIHGS-EEPIAK---RFKPSGDDQSNVDEKDKYKACSVCNMTFSSPVVAQSHYQGKVHSKNLRMQSIGSQTPALPQPKAQAKKDDGMQGPAEQDPNRFCSICQASFNNPLMAQQHYSGKKHKKHMNKQKLMETFGPSTAPASTVKGYPCTVCNIELNSVEQYQAHISGSKHKNHAKP---KKGPNAFAPP 270
BLAST of Matrin-type domain-containing protein vs. Ensembl Xenopus
Match: zmat1 (lysine-rich coiled-coil 1 [Source:NCBI gene;Acc:733809]) HSP 1 Score: 51.6026 bits (122), Expect = 2.698e-6 Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 1 Query: 583 EFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKD----DLR--CDVCNVIGESAAQMETHFAGKKHQMK 804 ++C+LC F+ + A QHYSGKKH +N ++ D D R C +CN+ S ++H G KHQ+K Sbjct: 223 KYCKLCCASFNKALVAQQHYSGKKHARNQARKKMMEEMEGTGVADSEVSDGRYVCPICNITLTSIEMYQSHMQGNKHQIK 302 HSP 2 Score: 50.447 bits (119), Expect = 7.615e-6 Identity = 37/126 (29.37%), Postives = 48/126 (38.10%), Query Frame = 1 Query: 286 ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKK 663 EL C C+A+L S +SHY KH K+ L FL + + L + +E V+ E+ + HK FC LC FSS V A HY GK H K Sbjct: 56 ELFTDTFCKVCNAVLQFESHRISHYEGKKHAQKVRLYFLKNELEEMALKTQRTDRVEFHVDG--------------------------EVAQGKHK----FCGLCNMVFSSPVVAQTHYVGKVHAK 151
BLAST of Matrin-type domain-containing protein vs. Ensembl Mouse
Match: Zfp346 (zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]) HSP 1 Score: 59.3066 bits (142), Expect = 3.680e-9 Identity = 55/239 (23.01%), Postives = 98/239 (41.00%), Query Frame = 1 Query: 184 FDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIE----LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKS---------------------GEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKN-------AENWSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 FD+ ++ ++ AGR ++ +++I+ L +C C A+L + S L+HY S KH NK+ HG + K +++ +++ S + + G KS K+ ++ K + +N LD + FC LC + F+ A QHY GK+H+K A +P + + C C ++ S Q + H +G KH+ Sbjct: 36 FDRERARRLWEAVSGAQPAGREEV------EHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETI---KGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLK-QQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 264
BLAST of Matrin-type domain-containing protein vs. Ensembl Mouse
Match: Zmat4 (zinc finger, matrin type 4 [Source:MGI Symbol;Acc:MGI:2443497]) HSP 1 Score: 53.9138 bits (128), Expect = 4.457e-8 Identity = 51/183 (27.87%), Postives = 70/183 (38.25%), Query Frame = 1 Query: 301 KKCLECSAILTTISSALSHYNSTKHQNKIALKFL---PHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDL----------RCDVCNVIGESAAQMETHFAGKKHQMKMK 810 K C C+ T+ A SHY H ++ L P T PLS + ++T AP +S R+ +C LC F++ + A QHY GKKHKKNA + ++ + T DL RC C+V S Q H G KHQ +K Sbjct: 6 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKPPLKTTAAPLSSLKAPRVDT-------------APVVASPYQRRD--------------SDRYCGLCAAWFNNPLMAQQHYEGKKHKKNA---ARVALLEQLGTSLDLGELRGLRRTYRCTTCSVSLNSIEQYHAHLQGSKHQTNLK 158
BLAST of Matrin-type domain-containing protein vs. Ensembl Mouse
Match: Zmat4 (zinc finger, matrin type 4 [Source:MGI Symbol;Acc:MGI:2443497]) HSP 1 Score: 54.299 bits (129), Expect = 1.007e-7 Identity = 51/183 (27.87%), Postives = 71/183 (38.80%), Query Frame = 1 Query: 301 KKCLECSAILTTISSALSHYNSTKHQNKIALKFL---PHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDL----------RCDVCNVIGESAAQMETHFAGKKHQMKMK 810 K C C+ T+ A SHY H ++ L P T PLS + ++T AP +S R+ + +C LC F++ + A QHY GKKHKKNA + ++ + T DL RC C+V S Q H G KHQ +K Sbjct: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKPPLKTTAAPLSSLKAPRVDT-------------APVVASPYQRRDSDR--------------YCGLCAAWFNNPLMAQQHYEGKKHKKNA---ARVALLEQLGTSLDLGELRGLRRTYRCTTCSVSLNSIEQYHAHLQGSKHQTNLK 227
BLAST of Matrin-type domain-containing protein vs. Ensembl Mouse
Match: Zmat4 (zinc finger, matrin type 4 [Source:MGI Symbol;Acc:MGI:2443497]) HSP 1 Score: 53.5286 bits (127), Expect = 1.393e-7 Identity = 51/181 (28.18%), Postives = 70/181 (38.67%), Query Frame = 1 Query: 301 KKCLECSAILTTISSALSHYNSTKHQNKIALKFL---PHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDL----------RCDVCNVIGESAAQMETHFAGKKHQMK 804 K C C+ T+ A SHY H ++ L P T PLS + ++T AP +S R+ + +C LC F++ + A QHY GKKHKKNA + ++ + T DL RC C+V S Q H G KHQ K Sbjct: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKPPLKTTAAPLSSLKAPRVDT-------------APVVASPYQRRDSDR--------------YCGLCAAWFNNPLMAQQHYEGKKHKKNA---ARVALLEQLGTSLDLGELRGLRRTYRCTTCSVSLNSIEQYHAHLQGSKHQTK 225
BLAST of Matrin-type domain-containing protein vs. Ensembl Mouse
Match: Zfp346 (zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]) HSP 1 Score: 53.5286 bits (127), Expect = 2.913e-7 Identity = 56/254 (22.05%), Postives = 98/254 (38.58%), Query Frame = 1 Query: 184 FDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIE----LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKS---------------------------GEPNAP----------GTAPTKSSKIPFRELVKKFEINENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKNAENW---SSFNPIKPIDTKD----DLRCDVCNVIGESAAQMETHFAGKKHQ 798 FD+ ++ ++ AGR ++ +++I+ L +C C A+L + S L+HY S KH NK+ HG + K +++ +++ S G+ +A G A +K PF + + +N LD + FC LC + F+ A QHY GK+H+K + + + D C C ++ S Q + H +G KH+ Sbjct: 36 FDRERARRLWEAVSGAQPAGREEV------EHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETI---KGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFL-VASTLALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 279
BLAST of Matrin-type domain-containing protein vs. UniProt/SwissProt
Match: sp|A2RV29|ZN346_DANRE (Zinc finger protein 346 OS=Danio rerio OX=7955 GN=znf346 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.159e-10 Identity = 60/228 (26.32%), Postives = 89/228 (39.04%), Query Frame = 1 Query: 286 ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRE-LVKKFEINENVHKLDLE----------------------------------FCRLCETPFSSKVAALQHYSGKKHKKNAEN---WSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPP 852 +L +C CSA+L + S L+HY S KH +K+ HG+ P++K R +G ++S + F +V + VH +L FC +C+ F++ + A QHYSGKKHKK+ +F P P T C VCN+ S Q + H +G KH+ K + A APP Sbjct: 50 DLFSDSQCKVCSAVLISESQKLAHYQSKKHASKVRRYMSIHGS-EEPIAK---RFKPSGDDQSNVDEKDKYKACSVCNMTFSSPVVAQSHYQGKVHSKNLRMQSIGSQTPALPQPEAQAKKDDGMQGPAEQDPNRFCSICQASFNNPLMAQQHYSGKKHKKHMNKQKLMETFGPSTAPASTVKGYPCTVCNIELNSVEQYQAHISGSKHKNHAKP---KKGPNAFAPP 270
BLAST of Matrin-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8AVN9|ZN346_XENLA (Zinc finger protein 346 OS=Xenopus laevis OX=8355 GN=znf346 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 5.442e-10 Identity = 74/287 (25.78%), Postives = 121/287 (42.16%), Query Frame = 1 Query: 265 DAPDNLI----ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKF-LPHGTYNLPLSKEEI--REIETGVNKS---------------GEPNAPGTAPTKSSKIPFRELVKKFEINE------------NVHKLD----LEFCRLCETPFSSKVAALQHYSGKKHKKNAE--------NWSSFNPIK-PI------------DTKDDLRCDVCNVIGESAAQMETHFAGKKHQ---MKMKAYLERVNAGAIAPPM-----SSRGF-CD-----FNNVEREEAN 906 DA ++LI + +C CSA+L + S L+HY S KH NK+ + G ++P K + EI G ++S E + G K+ ++ + VK+ +N+ + +K+D +FC+LC + F++ + A QHY+GKKHKK S P + PI CD CN++ S Q + H +G KH+ M M E + +AP + +GF CD N++E+ +A+ Sbjct: 18 DAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRLREQGGVKEGMVNQAKKTRTPTVATKSDNKMDHSDRAKFCKLCHSTFNNPLMAEQHYAGKKHKKQETKTQIMTIYTSSGQTPAQAPIPLNLNSPMPGSGSAGKGFSCDKCNIVLNSIEQYQAHVSGAKHKNQLMSMTPLSEEGHQAVVAPSAIASGSAGKGFSCDTCNIVLNSIEQYQAH 304
BLAST of Matrin-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9UL40|ZN346_HUMAN (Zinc finger protein 346 OS=Homo sapiens OX=9606 GN=ZNF346 PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 3.873e-9 Identity = 49/199 (24.62%), Postives = 77/199 (38.69%), Query Frame = 1 Query: 289 LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAP-------------------TKSSKIPFRELVKKFE-INENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFN--------PIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 L +C C A+L + S L+HY S KH NK+ HG L K E +++++ S + P T + + ++ K E +++N +D + FC LC F+ V A QHY GKKH+K + C C ++ S Q + H +G KH+ Sbjct: 69 LFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETL---KGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 264
BLAST of Matrin-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9R0B7|ZN346_MOUSE (Zinc finger protein 346 OS=Mus musculus OX=10090 GN=Znf346 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.574e-8 Identity = 55/239 (23.01%), Postives = 98/239 (41.00%), Query Frame = 1 Query: 184 FDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIE----LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKS---------------------GEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKN-------AENWSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 FD+ ++ ++ AGR ++ +++I+ L +C C A+L + S L+HY S KH NK+ HG + K +++ +++ S + + G KS K+ ++ K + +N LD + FC LC + F+ A QHY GK+H+K A +P + + C C ++ S Q + H +G KH+ Sbjct: 36 FDRERARRLWEAVSGAQPAGREEV------EHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETI---KGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLK-QQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 264
BLAST of Matrin-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9H898|ZMAT4_HUMAN (Zinc finger matrin-type protein 4 OS=Homo sapiens OX=9606 GN=ZMAT4 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.998e-7 Identity = 50/180 (27.78%), Postives = 70/180 (38.89%), Query Frame = 1 Query: 301 KKCLECSAILTTISSALSHYNSTKHQNKIALKF---LPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPI-KPIDT------KDDLRCDVCNVIGESAAQMETHFAGKKHQMKMK 810 K C C+ T+ A SHY H ++ L P T PLS + P TAP +S R+ + +C LC F++ + A QHY GKKHKKNA + + +D + + RC +C+V S Q H G KHQ +K Sbjct: 75 KCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLK-------------PPRMDTAPVVASPYQRRDSDR--------------YCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDMGELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLK 227
BLAST of Matrin-type domain-containing protein vs. TrEMBL
Match: A0A267FUQ4 (Matrin-type domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig023679g1 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.631e-15 Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 265 DAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKA 813 DAP N +L+ + C C A + +I +A HYN HQ ++ LP G Y +GV +G P E+ E LD ++C+LC+ F++ V QHYSG+KH+ NA++ + + +TK RCDVC + + ++ H G KH+ ++A Sbjct: 304 DAPHNFKQLVENQWCSLCLAGVNSIVTAEVHYNGKTHQRQLRENGLPAGEY------------YSGVLNTGNSQTP-------------------ELPEG---LDTQYCKLCDVTFTNTVQMFQHYSGRKHRSNAQDRTLVEKKQSAETK-IFRCDVCGIFTNTQDSLDCHLGGMKHKAMLEA 451
BLAST of Matrin-type domain-containing protein vs. TrEMBL
Match: A0A267FET4 (Matrin-type domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig018604g2 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.997e-15 Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 265 DAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKA 813 DAP N +L+ + C C A + +I +A HYN HQ ++ LP G Y +GV +G P E+ E LD ++C+LC+ F++ V QHYSG+KH+ NA++ + + +TK RCDVC + + ++ H G KH+ ++A Sbjct: 286 DAPHNFKQLVENQWCSLCLAGVNSIVTAEVHYNGKTHQRQLRENGLPAGEY------------YSGVLNTGNSQTP-------------------ELPEG---LDTQYCKLCDVTFTNTVQMFQHYSGRKHRSNAQDRTLVEKKQSAETK-IFRCDVCGIFTNTQDSLDCHLGGMKHKAMLEA 433
BLAST of Matrin-type domain-containing protein vs. TrEMBL
Match: A0A267E3E8 (Matrin-type domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig013165g1 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.488e-15 Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 265 DAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKA 813 DAP N +L+ + C C A + +I +A HYN HQ ++ LP G Y +GV +G P E+ E LD ++C+LC+ F++ V QHYSG+KH+ NA++ + + +TK RCDVC + + ++ H G KH+ ++A Sbjct: 302 DAPHNFKQLVENQWCSLCLAGVNSIVTAEVHYNGKTHQKQLRENGLPAGEY------------YSGVLNTGNSQTP-------------------ELPEG---LDTQYCKLCDVTFTNTVQMFQHYSGRKHRSNAQDRTLVEKKQSAETK-IFRCDVCGIFTNTQDSLDCHLGGMKHKAMLEA 449
BLAST of Matrin-type domain-containing protein vs. TrEMBL
Match: A0A2K5QGQ7 (Zinc finger protein 346 OS=Cebus capucinus imitator OX=1737458 GN=ZNF346 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.305e-9 Identity = 51/199 (25.63%), Postives = 79/199 (39.70%), Query Frame = 1 Query: 289 LIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAP-------------------TKSSKIPFRELVKKFE-INENVHKLDLE-FCRLCETPFSSKVAALQHYSGKKHKKNAEN--------WSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 L +C C A+L + S L+HY S KH NK+ HG L K E +++++ S + P T + + ++ K E +++N +D + FC LC F+ V A QHY GKKH+K W + + C C ++ S Q + H +G KHQ Sbjct: 69 LFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETL---KGETKKLDSDQKSSRSKDKNQCCPICNMTFFSPVVAQSHYLGKTHAKNLKLKQQYTKMEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGWMADPAVTDFPAGKGYPCKTCKIVLNSIKQYQAHISGFKHQ 264
BLAST of Matrin-type domain-containing protein vs. TrEMBL
Match: A0A226PMQ8 (Uncharacterized protein OS=Colinus virginianus OX=9014 GN=H355_006081 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.780e-9 Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 1 Query: 304 KCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKM 807 +C CSA+L + S L+HY S KH NK+ HG L K +++ V P G A P ++ + + N + + C +C FSS A HY GK H KN + S ++ C+ CN++ S Q + H +G KH+ +M Sbjct: 37 QCKVCSALLISESQRLAHYQSKKHANKVRRYLSIHGEEELAPGKR--MKLDAKVRGGPVPWESGEA--AGCVAPLCDICESKQEGTNGEDRN-KCCPICNMTFSSPAVATSHYLGKTHAKNVKQQSP-----KVEAGKGYPCNTCNIVLNSIEQYQAHISGFKHKNQM 194
BLAST of Matrin-type domain-containing protein vs. Ensembl Cavefish
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:103029588]) HSP 1 Score: 62.7734 bits (151), Expect = 2.164e-10 Identity = 56/210 (26.67%), Postives = 87/210 (41.43%), Query Frame = 1 Query: 286 ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPH------GTYNLPLSKEEIREIETG--------VNKS------GEPNAPGTAPTKSSKIPFRELVKKFEI----NENVHKLDLE-----------FCRLCETPFSSKVAALQHYSGKKHKKNAEN---WSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 +L +C CSA+L + S L+HY S KH +K+ H PLS E ++ G N + E + G K+ K+ + L + + V+K D++ FC +C+ F++ + A QHY GKKHKK+ ++ P P T C VCN+ S Q + H +G KH+ Sbjct: 29 DLFTDSQCKVCSAVLISESQKLAHYQSKKHASKVRRYMTIHKDEEPIAKRFKPLSDEATTDVNQGDKYKACTVCNMTFSSAVVAESHYQGKVHAKNLKL--KNLGPQTPVFVQPKAKVNKGDVQTAGGPGQDPNRFCSICQASFNNPLMAQQHYEGKKHKKHLTKQKLMETYGPSTAPASTLKGYPCTVCNIELNSVEQYQAHISGSKHK 236
BLAST of Matrin-type domain-containing protein vs. Ensembl Cavefish
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:103029588]) HSP 1 Score: 62.3882 bits (150), Expect = 2.492e-10 Identity = 56/210 (26.67%), Postives = 87/210 (41.43%), Query Frame = 1 Query: 286 ELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPH------GTYNLPLSKEEIREIETG--------VNKS------GEPNAPGTAPTKSSKIPFRELVKKFEI----NENVHKLDLE-----------FCRLCETPFSSKVAALQHYSGKKHKKNAEN---WSSFNP-IKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQ 798 +L +C CSA+L + S L+HY S KH +K+ H PLS E ++ G N + E + G K+ K+ + L + + V+K D++ FC +C+ F++ + A QHY GKKHKK+ ++ P P T C VCN+ S Q + H +G KH+ Sbjct: 29 DLFTDSQCKVCSAVLISESQKLAHYQSKKHASKVRRYMTIHKDEEPIAKRFKPLSDEATTDVNQGDKYKACTVCNMTFSSAVVAESHYQGKVHAKNLKL--KNLGPQTPVFVQPKAKVNKGDVQTAGGPGQDPNRFCSICQASFNNPLMAQQHYEGKKHKKHLTKQKLMETYGPSTAPASTLKGYPCTVCNIELNSVEQYQAHISGSKHK 236
BLAST of Matrin-type domain-containing protein vs. Ensembl Cavefish
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 58.9214 bits (141), Expect = 2.381e-9 Identity = 34/86 (39.53%), Postives = 42/86 (48.84%), Query Frame = 1 Query: 583 EFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPI-KPIDT------KDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYL 819 +C+LC F++ A QHY GKKHKKNA + K +D K CDVC+V S AQ H G KHQ +K L Sbjct: 145 RYCQLCNAWFNNPGMARQHYDGKKHKKNAARADLLEQLGKTLDMGEMKGLKRSYTCDVCSVTLNSVAQYHAHLQGSKHQNNLKNQL 230
BLAST of Matrin-type domain-containing protein vs. Ensembl Cavefish
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 58.9214 bits (141), Expect = 2.801e-9 Identity = 34/86 (39.53%), Postives = 42/86 (48.84%), Query Frame = 1 Query: 583 EFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPI-KPIDT------KDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYL 819 +C+LC F++ A QHY GKKHKKNA + K +D K CDVC+V S AQ H G KHQ +K L Sbjct: 170 RYCQLCNAWFNNPGMARQHYDGKKHKKNAARADLLEQLGKTLDMGEMKGLKRSYTCDVCSVTLNSVAQYHAHLQGSKHQNNLKNQL 255
BLAST of Matrin-type domain-containing protein vs. Ensembl Cavefish
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 57.7658 bits (138), Expect = 4.603e-9 Identity = 33/81 (40.74%), Postives = 40/81 (49.38%), Query Frame = 1 Query: 583 EFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPI-KPIDT------KDDLRCDVCNVIGESAAQMETHFAGKKHQMK 804 +C+LC F++ A QHY GKKHKKNA + K +D K CDVC+V S AQ H G KHQ K Sbjct: 140 RYCQLCNAWFNNPGMARQHYDGKKHKKNAARADLLEQLGKTLDMGEMKGLKRSYTCDVCSVTLNSVAQYHAHLQGSKHQNK 220
BLAST of Matrin-type domain-containing protein vs. Ensembl Sea Lamprey
Match: zmat4a (zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]) HSP 1 Score: 61.2326 bits (147), Expect = 6.751e-11 Identity = 59/214 (27.57%), Postives = 82/214 (38.32%), Query Frame = 1 Query: 307 CLECSAILTTISSALSHYNSTKHQNKIALKF---------LPHGTYNLPLSKEEIREIE-----------------TGVNKSGEPNAP------GTAPTKSSKIPFRELVKKFEINENVHKLDL------EFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSF--------NPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMK 810 C CSA L + S L+HY S KH NK+ + LP P E+ ++E + G+ +A GT ++ P + E V+ L + CRLC F++ A QHY GKKH+KNA + NP P K CD+CNV S Q + H G KHQ ++ Sbjct: 17 CKVCSAKLISESQRLAHYQSRKHANKVRMHSMLNPEDGGSLPKMVRTEPGGTEDSTDVERMKACTLCSMVFNSAVVAQAHYQGKTHAKKLKLMLGTEDATATVSPASKRASPVEDAALVNASPLAGSDPQKLCRLCNAFFNNPGMAAQHYEGKKHRKNAARAQTLGEPASGVTNPT-PAPAKTTYVCDLCNVNLNSMDQYQNHLKGNKHQNNLR 229 HSP 2 Score: 51.2174 bits (121), Expect = 1.553e-7 Identity = 31/111 (27.93%), Postives = 45/111 (40.54%), Query Frame = 1 Query: 586 FCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNP-----------IKPIDTKDDL------RCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPPMSSRG 867 FC++C S+ L HY +KH S NP +P T+D C +C+++ SA + H+ GK H K+K L +A A P S R Sbjct: 16 FCKVCSAKLISESQRLAHYQSRKHANKVRMHSMLNPEDGGSLPKMVRTEPGGTEDSTDVERMKACTLCSMVFNSAVVAQAHYQGKTHAKKLKLMLGTEDATATVSPASKRA 126
BLAST of Matrin-type domain-containing protein vs. Ensembl Medaka
Match: zgc:171482 (zinc finger matrin-type protein 4 [Source:NCBI gene;Acc:101159377]) HSP 1 Score: 60.4622 bits (145), Expect = 5.911e-10 Identity = 52/192 (27.08%), Postives = 71/192 (36.98%), Query Frame = 1 Query: 262 PDAPDNLIELIYRKKCLE-CSAILTTISSALSHYNSTKHQNKIALKFLP---HGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAEN-------WSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMK 804 PD PD + R KC C+ T+ A SHY H ++ L TY P S + +T A T S RE K +C LC F++ + A QHY GKKH++NA S + + + C +C+V+ S Q H G KHQ K Sbjct: 63 PDNPDCAETEVDRNKCCTLCNMFFTSAIVAQSHYQGKTHAKRVRLVLGEPPNLTTYKWPFSNLHLISTDT-------------AYTVGSGNGGREAGK--------------YCCLCGAWFNNPLMAQQHYEGKKHRRNAARARLLEQLAGSLDATESTGLRSSYSCSICSVVLNSIEQYHAHLQGSKHQNK 227
BLAST of Matrin-type domain-containing protein vs. Ensembl Medaka
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:101166820]) HSP 1 Score: 58.9214 bits (141), Expect = 6.931e-9 Identity = 51/212 (24.06%), Postives = 87/212 (41.04%), Query Frame = 1 Query: 193 SNKILPYKKINENTSAGRLQMRVPDAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKN------AENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMK 810 +NK+ Y + + + ++ ++ +L K C C+ I T+ + A SHY H ++ ++ + EE +E GV T TK P R FC +C+ F++ + A QHY G+KHKK E + + P T +C +CN+ S +Q ++H +G KH+ +MK Sbjct: 58 ANKVRQYTSLQNEKELLHKKQKTSESDESNGDLDRTKACQLCNTIFTSKAVAESHYQGKFHAKRLKMEMTDVQPAGRASTAEEPKEKPGGV--------IATVKTKDDN-PER------------------FCSICDASFNNPLMAEQHYVGRKHKKRMTRVKLMETYGFSSAQAP--TLLSFKCVLCNIEVNSISQYQSHLSGAKHRNQMK 240
BLAST of Matrin-type domain-containing protein vs. Planmine SMEST
Match: SMESG000072403.1 (SMESG000072403.1) HSP 1 Score: 981.474 bits (2536), Expect = 0.000e+0 Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1 Query: 76 MPTETVDSESILEVNYEIDPSLNIAAPPEDLSDEEIFDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPPMSSRGFCDFNNVEREEANPVDPTRFIQENILPKNLSGSFLNPYEPEPQQFEDNYIDESNYGMKRNMNSGFDEFGMRAGGPVAIGYEHEYGMSMSGNVGFDSEFGMRRPGPMGLDNEFGMSRSNKAGFDNDYMDDIKPPISSLNFRINVQPDIKRNVSNMPDDSNPYIAPPWSSSIGRSQMSAPYAPNIPNRYGPQFATQTFGPTKFKYSRKSQI 1494 MPTETVDSESILEVNYEIDPSLNIAAPPEDLSDEEIFDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPPMSSRGFCDFNNVEREEANPVDPTRFIQENILPKNLSGSFLNPYEPEPQQFEDNYIDESNYGMKRNMNSGFDEFGMRAGGPVAIGYEHEYGMSMSGNVGFDSEFGMRRPGPMGLDNEFGMSRSNKAGFDNDYMDDIKPPISSLNFRINVQPDIKRNVSNMPDDSNPYIAPPWSSSIGRSQMSAPYAPNIPNRYGPQFATQTFGPTKFKYSRKSQI Sbjct: 1 MPTETVDSESILEVNYEIDPSLNIAAPPEDLSDEEIFDKSNKILPYKKINENTSAGRLQMRVPDAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFNPIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAPPMSSRGFCDFNNVEREEANPVDPTRFIQENILPKNLSGSFLNPYEPEPQQFEDNYIDESNYGMKRNMNSGFDEFGMRAGGPVAIGYEHEYGMSMSGNVGFDSEFGMRRPGPMGLDNEFGMSRSNKAGFDNDYMDDIKPPISSLNFRINVQPDIKRNVSNMPDDSNPYIAPPWSSSIGRSQMSAPYAPNIPNRYGPQFATQTFGPTKFKYSRKSQI 473
BLAST of Matrin-type domain-containing protein vs. Planmine SMEST
Match: SMESG000003775.1 (SMESG000003775.1) HSP 1 Score: 125.176 bits (313), Expect = 1.329e-31 Identity = 72/217 (33.18%), Postives = 112/217 (51.61%), Query Frame = 1 Query: 238 AGRLQMRVPDAPDNLIELIYRKKCLECSAILTTISSALSHYNSTKHQNKIALKFLPHGTYNLPLSKEEIREIETGVNKSGEPNAPGTAPTKSSKIPFRELVKKFEINENVHKLDLEFCRLCETPFSSKVAALQHYSGKKHKKNAENWSSFN-PIKPIDTKDDLRCDVCNVIGESAAQMETHFAGKKHQMKMKAYLERVNAGAIAP-PMSSRGFCDFN 882 A LQ PD P NL++L+ C C+ + ++ SA++HYNS HQ+ + +G + LPL+ EI ++E+GV E + SK E+ ++ E+V K+++E+C +C PF+S + AL+HY GKKHK+ ++ P P +D RC VC++ S M H GK HQ K+ +E N I P + G D+N Sbjct: 21 AATLQQIRPDVPKNLVDLLNNYNCKLCNTFIPSLKSAITHYNSDSHQSTLRSANFEYGLFELPLTPSEILDLESGVLICAEGSNTVQLVDPISKAKKEEI----KLPESVDKINIEYCSICNVPFNSSIMALKHYGGKKHKQRF--FAKLTAPSDPRSITEDYRCSVCSLSTSSEENMRLHLEGKPHQKKLAKNIEENNMRTIPPETICKWGVMDYN 231 The following BLAST results are available for this feature:
BLAST of Matrin-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Matrin-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Matrin-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Matrin-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Matrin-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Matrin-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Matrin-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Matrin-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Matrin-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Matrin-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Matrin-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Matrin-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Matrin-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Matrin-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30013766 ID=SMED30013766|Name=Matrin-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1758bpback to top protein sequence of SMED30013766-orf-1 >SMED30013766-orf-1 ID=SMED30013766-orf-1|Name=SMED30013766-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=474bp MPTETVDSESILEVNYEIDPSLNIAAPPEDLSDEEIFDKSNKILPYKKINback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|