Hox class homeodomain protein DjAbd-Bb
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30013674 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 30Note: Hover over icons to view figure legend
Homology
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Human
Match: HOXC12 (homeobox C12 [Source:HGNC Symbol;Acc:HGNC:5124]) HSP 1 Score: 88.5817 bits (218), Expect = 7.767e-19 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 RSRKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 213 RSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLRE 276
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Human
Match: HOXD12 (homeobox D12 [Source:HGNC Symbol;Acc:HGNC:5135]) HSP 1 Score: 86.6557 bits (213), Expect = 2.513e-18 Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 A R+RKKRKPYT+ Q LE+EF N +I RQKR E+S +L+LS++QVK+WFQNRRMKKK++ R+ Sbjct: 198 APGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVLRE 264
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Human
Match: HOXA10 (homeobox A10 [Source:HGNC Symbol;Acc:HGNC:5100]) HSP 1 Score: 81.2629 bits (199), Expect = 3.474e-18 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT++QT+ LE EF N Y+TR++R EIS +HL++RQVK+WFQNRRMK KK+ Sbjct: 20 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 78
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Human
Match: HOXB9 (homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]) HSP 1 Score: 85.1149 bits (209), Expect = 7.352e-18 Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 SRKKR PYT+YQT+ LE EF N Y+TR +R E++ L+LSERQVK+WFQNRRMK KK+ Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKM 243
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Human
Match: AC004080.3 (HOXA10-HOXA9 readthrough) HSP 1 Score: 80.8777 bits (198), Expect = 8.045e-18 Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 +RKKR PYT++QT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK+ Sbjct: 46 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 104
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Celegans
Match: php-3 (Posterior Hox gene Paralog [Source:UniProtKB/TrEMBL;Acc:Q9XW88]) HSP 1 Score: 96.6709 bits (239), Expect = 4.209e-22 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 1200 LLDSGSL--TEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPG 1433 L D G L T + RKKRKPYT+ QT+ LE EF N Y+++QKRWE++ LHL+ERQVK+WFQNRRMK KK + R G Sbjct: 184 LNDGGQLEWTSSSHAMRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQRTSG 263
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Celegans
Match: php-3 (Posterior Hox gene Paralog [Source:UniProtKB/TrEMBL;Acc:Q9XW88]) HSP 1 Score: 96.6709 bits (239), Expect = 4.209e-22 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 1200 LLDSGSL--TEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPG 1433 L D G L T + RKKRKPYT+ QT+ LE EF N Y+++QKRWE++ LHL+ERQVK+WFQNRRMK KK + R G Sbjct: 184 LNDGGQLEWTSSSHAMRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQRTSG 263
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Celegans
Match: mab-5 (Homeobox protein mab-5 [Source:UniProtKB/Swiss-Prot;Acc:P10038]) HSP 1 Score: 81.6481 bits (200), Expect = 1.575e-17 Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQLKSTVHENNIQ 1481 S++ R+ Y+R QT+ LE EF + Y+TR++R EIS LHL+ERQVK+WFQNRRMK KK + GS + +S E N Q Sbjct: 117 SKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEGGSNESDEESNQDEQNEQ 197
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Celegans
Match: nob-1 (KNOB-like posterior (NO Backside) [Source:UniProtKB/TrEMBL;Acc:G5EFY5]) HSP 1 Score: 76.6406 bits (187), Expect = 2.055e-15 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPG 1433 +KKR+PY + Q LE E++ N Y+T ++R E+S +L L E+QVKVWFQNRRMK KKL+ R G Sbjct: 162 GKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKLRQRHSG 226
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Celegans
Match: nob-1 (KNOB-like posterior (NO Backside) [Source:UniProtKB/TrEMBL;Acc:G5EFY5]) HSP 1 Score: 72.0182 bits (175), Expect = 2.442e-15 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPG 1433 +KKR+PY + Q LE E++ N Y+T ++R E+S +L L E+QVKVWFQNRRMK KKL+ R G Sbjct: 11 GKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKLRQRHSG 75
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0346764) HSP 1 Score: 91.6633 bits (226), Expect = 3.531e-20 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 ++ RKKRKPY+++QT+ LE EF NAY+++QKRWE++ L L+ERQVK+WFQNRRMK KK Sbjct: 160 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0083381) HSP 1 Score: 91.2781 bits (225), Expect = 4.048e-20 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 ++ RKKRKPY+++QT+ LE EF NAY+++QKRWE++ L L+ERQVK+WFQNRRMK KK Sbjct: 160 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0083382) HSP 1 Score: 91.2781 bits (225), Expect = 4.048e-20 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 ++ RKKRKPY+++QT+ LE EF NAY+++QKRWE++ L L+ERQVK+WFQNRRMK KK Sbjct: 160 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0415465) HSP 1 Score: 91.2781 bits (225), Expect = 4.048e-20 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 ++ RKKRKPY+++QT+ LE EF NAY+++QKRWE++ L L+ERQVK+WFQNRRMK KK Sbjct: 160 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Fly
Match: Abd-B (gene:FBgn0000015 transcript:FBtr0083385) HSP 1 Score: 91.2781 bits (225), Expect = 4.048e-20 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 ++ RKKRKPY+++QT+ LE EF NAY+++QKRWE++ L L+ERQVK+WFQNRRMK KK Sbjct: 160 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 221
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Zebrafish
Match: hoxd12a (homeobox D12a [Source:NCBI gene;Acc:100006598]) HSP 1 Score: 88.9669 bits (219), Expect = 3.029e-19 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 +++RSRKKRKPYT+ Q LE+EF N +I RQKR E+S +L LS++QVK+WFQNRRMKKK+L R+ Sbjct: 205 SQVRSRKKRKPYTKPQLTELENEFMMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKKRLMMRE 271
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Zebrafish
Match: hoxd12a (homeobox D12a [Source:NCBI gene;Acc:100006598]) HSP 1 Score: 88.5817 bits (218), Expect = 3.462e-19 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 +++RSRKKRKPYT+ Q LE+EF N +I RQKR E+S +L LS++QVK+WFQNRRMKKK+L R+ Sbjct: 190 SQVRSRKKRKPYTKPQLTELENEFMMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKKRLMMRE 256
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Zebrafish
Match: hoxc12a (homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]) HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-18 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 R+RKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 205 RTRKKRKPYSKLQLAELEGEFMLNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLRE 268
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Zebrafish
Match: hoxb9a (homeobox B9a [Source:NCBI gene;Acc:30344]) HSP 1 Score: 85.5001 bits (210), Expect = 3.265e-18 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKP 1430 SRKKR PYT+YQT+ LE EF N Y+TR +R E++ L+L+ERQVK+WFQNRRMK KK+ +P Sbjct: 184 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKDQP 247
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Zebrafish
Match: hoxd9a (homeobox D9a [Source:NCBI gene;Acc:30350]) HSP 1 Score: 85.1149 bits (209), Expect = 4.795e-18 Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 +RKKR PYT+YQT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK+ Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKM 253
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Xenopus
Match: syt8 (synaptotagmin 8 [Source:Xenbase;Acc:XB-GENE-978920]) HSP 1 Score: 87.4261 bits (215), Expect = 1.245e-18 Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 RSRKKRKPY++ Q LE EF N +ITRQ+R E+S +L LS++QVK+WFQNRRMKKK+L R+ Sbjct: 194 RSRKKRKPYSKIQLAELEGEFMVNEFITRQRRRELSDRLSLSDQQVKIWFQNRRMKKKRLLMRE 257
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Xenopus
Match: ENSXETT00000012547.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:32894477:32894749:1 gene:ENSXETG00000005170.1 transcript:ENSXETT00000012547.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 82.0333 bits (201), Expect = 1.425e-18 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT++QT+ LE EF N Y+TR++R EIS +HLS+RQVK+WFQNRRMK KK+ Sbjct: 17 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLSDRQVKIWFQNRRMKLKKM 74
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Xenopus
Match: ache (acetylcholinesterase (Cartwright blood group) [Source:Xenbase;Acc:XB-GENE-923160]) HSP 1 Score: 85.8853 bits (211), Expect = 2.791e-18 Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 SRKKR PYT+YQT+ LE EF N Y+TR +R E++ L+LSERQVK+WFQNRRMK KKL Sbjct: 181 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKL 239
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Xenopus
Match: ENSXETT00000012532.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:32900780:32902234:1 gene:ENSXETG00000005181.1 transcript:ENSXETT00000012532.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 83.5741 bits (205), Expect = 2.766e-17 Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 +RKKR PYT++QT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK+ Sbjct: 195 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 253
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Xenopus
Match: tollip (toll interacting protein [Source:Xenbase;Acc:XB-GENE-946207]) HSP 1 Score: 83.1889 bits (204), Expect = 1.242e-16 Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT++QT+ LE EF N Y+TR++R EIS ++L++RQVK+WFQNRRMK KK+ Sbjct: 278 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKM 335
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Mouse
Match: Hoxc12 (homeobox C12 [Source:MGI Symbol;Acc:MGI:96194]) HSP 1 Score: 88.5817 bits (218), Expect = 5.775e-19 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 RSRKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 211 RSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLRE 274
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Mouse
Match: Hoxa10 (homeobox A10 [Source:MGI Symbol;Acc:MGI:96171]) HSP 1 Score: 81.6481 bits (200), Expect = 1.781e-18 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT++QT+ LE EF N Y+TR++R EIS +HL++RQVK+WFQNRRMK KK+ Sbjct: 20 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 78
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Mouse
Match: Hoxd12 (homeobox D12 [Source:MGI Symbol;Acc:MGI:96204]) HSP 1 Score: 86.2705 bits (212), Expect = 2.341e-18 Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 A R+RKKRKPYT+ Q LE+EF N +I RQKR E+S +L+LS++QVK+WFQNRRMKKK++ R+ Sbjct: 196 APGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVQRE 262
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Mouse
Match: Hoxb9 (homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]) HSP 1 Score: 85.1149 bits (209), Expect = 4.379e-18 Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 SRKKR PYT+YQT+ LE EF N Y+TR +R E++ L+LSERQVK+WFQNRRMK KK+ Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKM 243
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Mouse
Match: Hoxa10 (homeobox A10 [Source:MGI Symbol;Acc:MGI:96171]) HSP 1 Score: 86.6557 bits (213), Expect = 1.274e-17 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT++QT+ LE EF N Y+TR++R EIS +HL++RQVK+WFQNRRMK KK+ Sbjct: 342 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 400
BLAST of Hox class homeodomain protein DjAbd-Bb vs. UniProt/SwissProt
Match: sp|P09087|ABDB_DROME (Homeobox protein abdominal-B OS=Drosophila melanogaster OX=7227 GN=Abd-B PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 9.382e-19 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 ++ RKKRKPY+++QT+ LE EF NAY+++QKRWE++ L L+ERQVK+WFQNRRMK KK Sbjct: 383 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
BLAST of Hox class homeodomain protein DjAbd-Bb vs. UniProt/SwissProt
Match: sp|Q9IA16|HXD12_HETFR (Homeobox protein Hox-D12 OS=Heterodontus francisci OX=7792 GN=HOXD12 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.580e-18 Identity = 40/66 (60.61%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 1230 EMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 ++RSR+KRKPYT+ Q LE+EF N +I RQKR E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 201 QVRSRRKRKPYTKQQIAELENEFLANEFINRQKRKELSDRLNLSDQQVKIWFQNRRMKKKRLVMRE 266
BLAST of Hox class homeodomain protein DjAbd-Bb vs. UniProt/SwissProt
Match: sp|Q90471|HXDCA_DANRE (Homeobox protein Hox-D12a OS=Danio rerio OX=7955 GN=hoxd12a PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.613e-18 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 +++RSRKKRKPYT+ Q LE+EF N +I RQKR E+S +L LS++QVK+WFQNRRMKKK+L R+ Sbjct: 190 SQVRSRKKRKPYTKPQLTELENEFMMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKKRLMMRE 256
BLAST of Hox class homeodomain protein DjAbd-Bb vs. UniProt/SwissProt
Match: sp|P31275|HXC12_HUMAN (Homeobox protein Hox-C12 OS=Homo sapiens OX=9606 GN=HOXC12 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.730e-18 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 RSRKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 213 RSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLRE 276
BLAST of Hox class homeodomain protein DjAbd-Bb vs. UniProt/SwissProt
Match: sp|Q8K5B8|HXC12_MOUSE (Homeobox protein Hox-C12 OS=Mus musculus OX=10090 GN=Hoxc12 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.040e-18 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 RSRKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 211 RSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLRE 274
BLAST of Hox class homeodomain protein DjAbd-Bb vs. TrEMBL
Match: Q9BLF8 (Hox class homeodomain protein DjAbd-Bb OS=Dugesia japonica OX=6161 GN=DjAbd-Bb PE=2 SV=1) HSP 1 Score: 695.271 bits (1793), Expect = 0.000e+0 Identity = 373/407 (91.65%), Postives = 387/407 (95.09%), Query Frame = 3 Query: 264 MDQVVVGTAASNLVRSGPNRLFAPTNCSLYSNVFTHSYLQQNIPNGSSNHPLGINHTQTAVSLPELDSFKIDAATALPGMALYXXXXXXXXXXXXXHQTNFDSGSINEFSGSNQYCGGSRHLGFSYPAWYNSNIRIDACDESNGMTTTEQPHWSCSPYSTAVSDARNSLVFGMDCLANPSRTTIKQSSSPPSKVNFPIPDCMTSPPSPIRQESSPIHPPNLNHMSSFHSLSDRAIQLYQQAASNPVDSLYGGQQPQLNPNYYQSTPNNASYPTIPYMSGTPAYNPMYXXXXXXXXXXXXXXXXXXXXHTEDMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQLKSTVHENNIQE 1484 MDQVVVGTAASNLVRSGPNRLF PTNCSLYSNVFTHSYLQQNIPNGSSNH L IN +Q VSLPEL+SFKIDAA+ALPGMALYSASSNSLSN N+ + ++GSIN+F GS QYCGGSRHLGFSYPAWYNSNIRIDAC+ESNGMTT+EQPHWSCSPYSTAVSDARNSLVFGMDCLANP+RTTIKQSSSPPSKVNFPIPDCMTSP SPIRQE+SPIHP NLNHMSSFHSLSDRAIQLYQQAASNPVDSLYG QQPQLN NYYQSTPNNASYPTIPYMSGTPAYNPMYAAASFAASNSLFSSDFFSRFHTEDMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGS+DDQ+KS VHE NIQE Sbjct: 1 MDQVVVGTAASNLVRSGPNRLFPPTNCSLYSNVFTHSYLQQNIPNGSSNHSLAINASQPPVSLPELESFKIDAASALPGMALYSASSNSLSNNNHQNNF--ENGSINDFPGSGQYCGGSRHLGFSYPAWYNSNIRIDACEESNGMTTSEQPHWSCSPYSTAVSDARNSLVFGMDCLANPTRTTIKQSSSPPSKVNFPIPDCMTSPSSPIRQENSPIHPTNLNHMSSFHSLSDRAIQLYQQAASNPVDSLYGSQQPQLNANYYQSTPNNASYPTIPYMSGTPAYNPMYAAASFAASNSLFSSDFFSRFHTEDMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSSDDQIKSNVHE-NIQE 404
BLAST of Hox class homeodomain protein DjAbd-Bb vs. TrEMBL
Match: A0A4E0S0C4 (Homeobox protein Hox-D10 OS=Fasciola hepatica OX=6192 GN=D915_003749 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.431e-30 Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 3 Query: 1218 LTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKP 1430 L E RSRKKRKPYTRYQTMVLE+EF GNAYITRQKRWEISCKLHL+ERQVKVWFQNRRMKKKKLQ+R P Sbjct: 591 LNNGETRSRKKRKPYTRYQTMVLENEFIGNAYITRQKRWEISCKLHLTERQVKVWFQNRRMKKKKLQSRNP 661
BLAST of Hox class homeodomain protein DjAbd-Bb vs. TrEMBL
Match: A0A504YXH1 (Homeobox protein Hox-D10 OS=Fasciola gigantica OX=46835 GN=FGIG_01387 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.662e-30 Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKP 1430 E RSRKKRKPYTRYQTMVLE+EF GNAYITRQKRWEISCKLHL+ERQVKVWFQNRRMKKKKLQ+R P Sbjct: 594 GETRSRKKRKPYTRYQTMVLENEFIGNAYITRQKRWEISCKLHLTERQVKVWFQNRRMKKKKLQSRNP 661
BLAST of Hox class homeodomain protein DjAbd-Bb vs. TrEMBL
Match: A0A5K4F336 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.326e-30 Identity = 63/77 (81.82%), Postives = 67/77 (87.01%), Query Frame = 3 Query: 1194 DMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTR 1424 D L S + MRSRKKRKPYTRYQTMVLE+EF GNAYITRQKRWEISCKLHL+ERQVKVWFQNRRMKKKKLQ+R Sbjct: 686 DEYLPSDCRSSGGMRSRKKRKPYTRYQTMVLENEFMGNAYITRQKRWEISCKLHLTERQVKVWFQNRRMKKKKLQSR 762
BLAST of Hox class homeodomain protein DjAbd-Bb vs. TrEMBL
Match: Q9U9T2 (Post2 homeobox protein (Fragment) OS=Alitta virens OX=880429 GN=Post2 PE=4 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 6.637e-30 Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTR 1424 R RKKRKPYTRYQTMVLE+EF GN+YITRQKRWEISCKLHLSERQVKVWFQNRRMK+KKL R Sbjct: 5 RQRKKRKPYTRYQTMVLENEFMGNSYITRQKRWEISCKLHLSERQVKVWFQNRRMKRKKLNER 67
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Cavefish
Match: hoxd9a (homeobox protein Hox-D9a [Source:NCBI gene;Acc:103033248]) HSP 1 Score: 88.5817 bits (218), Expect = 3.044e-19 Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQ 1448 +RKKR PYT+YQT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK+ R+ GS D Q Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMN-RERGSKDPQ 263
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Cavefish
Match: hoxd9a (homeobox protein Hox-D9a [Source:NCBI gene;Acc:103033248]) HSP 1 Score: 88.5817 bits (218), Expect = 3.044e-19 Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQ 1448 +RKKR PYT+YQT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK+ R+ GS D Q Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMN-RERGSKDPQ 263
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Cavefish
Match: hoxd12a (homeobox protein Hox-D12a-like [Source:NCBI gene;Acc:103047027]) HSP 1 Score: 87.8113 bits (216), Expect = 5.860e-19 Identity = 40/66 (60.61%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 1230 EMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 ++R+RKKRKPYT+ Q LE+EF N +I RQKR E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 190 QLRARKKRKPYTKPQLAELENEFMINEFINRQKRKELSDRLNLSDQQVKIWFQNRRMKKKRLLIRE 255
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Cavefish
Match: hoxc12a (homeobox protein Hox-C12a-like [Source:NCBI gene;Acc:103031159]) HSP 1 Score: 87.8113 bits (216), Expect = 6.653e-19 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 1185 HTEDMLLDSGS-LTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 HT +M G+ R+RKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 190 HTSNMSTGGGAPWYPMHTRTRKKRKPYSKLQLAELEGEFMMNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLRE 271
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Cavefish
Match: ENSAMXT00000043089.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000050.1:1458192:1460142:1 gene:ENSAMXG00000035583.1 transcript:ENSAMXT00000043089.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 86.6557 bits (213), Expect = 3.719e-18 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT+YQT+ LE EF N Y+TR++R EIS +HL++RQVK+WFQNRRMK KK+ Sbjct: 262 RKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 319
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011221.1 (pep scaffold:Pmarinus_7.0:GL477881:55654:55833:1 gene:ENSPMAG00000010194.1 transcript:ENSPMAT00000011221.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 82.8037 bits (203), Expect = 5.132e-20 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT+YQT+ LE EF N Y+TR++R EIS ++L++RQVK+WFQNRRMK KKL Sbjct: 2 RKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISRGVNLTDRQVKIWFQNRRMKLKKL 59
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011242.1 (pep scaffold:Pmarinus_7.0:GL476758:607601:607780:-1 gene:ENSPMAG00000010215.1 transcript:ENSPMAT00000011242.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.9518 bits (193), Expect = 1.151e-18 Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQ 1418 RKKR PY++ QT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK++ Sbjct: 2 RKKRCPYSKQQTLELEKEFLFNMYLTRDRRYEVARGLNLTERQVKIWFQNRRMKLKKMK 60
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011060.1 (pep scaffold:Pmarinus_7.0:GL482503:5543:5722:1 gene:ENSPMAG00000010033.1 transcript:ENSPMAT00000011060.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.9518 bits (193), Expect = 1.151e-18 Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQ 1418 RKKR PY++ QT+ LE EF N Y+TR +R+E++ L+L+ERQVK+WFQNRRMK KK++ Sbjct: 2 RKKRCPYSKQQTLELEKEFLFNMYLTRDRRYEVARGLNLTERQVKIWFQNRRMKLKKMK 60
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011449.1 (pep scaffold:Pmarinus_7.0:GL493006:3300:3479:1 gene:ENSPMAG00000010422.1 transcript:ENSPMAT00000011449.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 76.2554 bits (186), Expect = 8.573e-18 Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 +RKKR PYT++QT+ LE EF + Y+TR++R EIS L L++RQVK+WFQNRRMK KK+ Sbjct: 1 TRKKRCPYTKHQTLELEKEFLFSMYLTRERRLEISHLLSLTDRQVKIWFQNRRMKLKKM 59
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010946.1 (pep scaffold:Pmarinus_7.0:GL477014:179916:180095:-1 gene:ENSPMAG00000009919.1 transcript:ENSPMAT00000010946.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 74.3294 bits (181), Expect = 4.587e-17 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 1242 RKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKL 1415 RKKR PYT++QT LE EF + YI ++KR +IS L+L++RQVK+WFQNRRMK+KKL Sbjct: 2 RKKRCPYTKFQTRELEREFFFSVYINKEKRLQISRLLNLTDRQVKIWFQNRRMKEKKL 59
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Yeast
Match: YOX1 (Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication [Source:SGD;Acc:S000004489]) HSP 1 Score: 47.3654 bits (111), Expect = 4.493e-6 Identity = 20/65 (30.77%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRR--MKKKKLQTRK 1427 +R+KR+ + + +L++EF +++KR E++ H++E+ V++WFQN+R +K++++ T K Sbjct: 176 ARRKRRRTSSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRIATSK 240
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Nematostella
Match: MOXC (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR27]) HSP 1 Score: 75.8702 bits (185), Expect = 4.512e-17 Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 1224 EAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 +A+ R RK+R +++YQ LE EF N Y+TR +R+EI+ L L ERQVKVWFQNRRMK K+ Sbjct: 9 DAKSRKRKERTVFSKYQLTELEREFCRNNYLTRLRRYEIAVSLDLGERQVKVWFQNRRMKWKR 71
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Nematostella
Match: MOXB (MoxB; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR28]) HSP 1 Score: 76.2554 bits (186), Expect = 5.668e-17 Identity = 34/65 (52.31%), Postives = 50/65 (76.92%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKP 1430 + RK+R +T++Q LE+EF N Y+TR +R+EI+ L L+ERQVKVWFQNRRMK K+++ ++P Sbjct: 15 KKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKGKRP 79
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Nematostella
Match: EDO42196 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S291]) HSP 1 Score: 66.2402 bits (160), Expect = 6.787e-14 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 1230 EMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQ 1418 E + R++R +T QT+ LE EF N YITR +R+E++ L+L+E QVK+WFQNRR K K+L+ Sbjct: 6 ENKPRRQRTTFTSEQTLKLELEFHQNEYITRSRRFELAACLNLTETQVKIWFQNRRAKDKRLE 68
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Nematostella
Match: HOX2 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RS10]) HSP 1 Score: 68.5514 bits (166), Expect = 3.164e-13 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 RS++ R YT Q + LE EF+ N Y++R +R +I+ L LSE+QVK+WFQNRR+K KK Sbjct: 122 RSKRIRTAYTSMQLLELEKEFSQNRYLSRLRRIQIAALLDLSEKQVKIWFQNRRVKWKK 180
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Nematostella
Match: EDO33847 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR26]) HSP 1 Score: 63.5438 bits (153), Expect = 5.547e-13 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 1269 YQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQ-TRKP 1430 +Q LE+EF N Y+TR +R+EI+ L L+ERQVKVWFQNRRMK K+++ +KP Sbjct: 1 HQLQELENEFIRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKGGKKP 55
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Medaka
Match: hoxd12a (homeobox D12 [Source:NCBI gene;Acc:101162794]) HSP 1 Score: 87.4261 bits (215), Expect = 6.072e-19 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 1227 AEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 +++RSRKKRKPY++ Q LE+EF N +I RQKR E+S KL LS++QVK+WFQNRRMKKK+L R+ Sbjct: 183 SQVRSRKKRKPYSKPQLAELENEFLMNEFINRQKRKELSDKLDLSDQQVKIWFQNRRMKKKRLMMRE 249
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Medaka
Match: hoxc12a (homeobox protein Hox-C12a [Source:NCBI gene;Acc:101173058]) HSP 1 Score: 87.4261 bits (215), Expect = 9.552e-19 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 1236 RSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 R+RKKRKPY++ Q LE EF N +ITRQ+R E+S +L+LS++QVK+WFQNRRMKKK+L R+ Sbjct: 203 RTRKKRKPYSKLQLAELEGEFMLNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLMLRE 266
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Medaka
Match: hoxd9 (homeobox D10 [Source:NCBI gene;Acc:101163860]) HSP 1 Score: 87.0409 bits (214), Expect = 1.102e-18 Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQL 1451 +RKKR PYT+YQT+ LE EF N Y+TR +R+E++ L L+ERQVK+WFQNRRMK KK+ K G DQL Sbjct: 203 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRFEVARILSLTERQVKIWFQNRRMKMKKMNREKGGK--DQL 271
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Medaka
Match: ENSORLT00000001667.2 (homeobox protein Hox-D9b [Source:NCBI gene;Acc:101175260]) HSP 1 Score: 86.2705 bits (212), Expect = 3.725e-18 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRK 1427 +RKKR PYT++QT+ LE EF N Y+TR +R E++ L+L+ERQVK+WFQNRRMK KKL R+ Sbjct: 247 TRKKRCPYTKHQTLELEKEFLYNMYLTRDRRLEVAGLLNLTERQVKIWFQNRRMKMKKLMIRE 309
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Medaka
Match: hoxb9a (homeobox B9 [Source:NCBI gene;Acc:100049206]) HSP 1 Score: 84.7297 bits (208), Expect = 7.388e-18 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 1239 SRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 SRKKR PYT+YQT+ LE EF N Y+TR +R E++ L+L+ERQVK+WFQNRRMK KK Sbjct: 217 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRRMKMKK 274
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Planmine SMEST
Match: SMESG000033048.1 (SMESG000033048.1) HSP 1 Score: 769.229 bits (1985), Expect = 0.000e+0 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 3 Query: 264 MDQVVVGTAASNLVRSGPNRLFAPTNCSLYSNVFTHSYLQQNIPNGSSNHPLGINHTQTAVSLPELDSFKIDAATALPGMALYXXXXXXXXXXXXXHQTNFDSGSINEFSGSNQYCGGSRHLGFSYPAWYNSNIRIDACDESNGMTTTEQPHWSCSPYSTAVSDARNSLVFGMDCLANPSRTTIKQSSSPPSKVNFPIPDCMTSPPSPIRQESSPIHPPNLNHMSSFHSLSDRAIQLYQQAASNPVDSLYGGQQPQLNPNYYQSTPNNASYPTIPYMSGTPAYNPMYXXXXXXXXXXXXXXXXXXXXHTEDMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQLKSTVHENNIQE 1484 MDQVVVGTAASNLVRSGPNRLFAPTNCSLYSNVFTHSYLQQNIPNGSSNHPLGINHTQTAVSLPELDSFKIDAATALPGMALYSASSNSLSNTNNSHQTNFDSGSINEFSGSNQYCGGSRHLGFSYPAWYNSNIRIDACDESNGMTTTEQPHWSCSPYSTAVSDARNSLVFGMDCLANPSRTTIKQSSSPPSKVNFPIPDCMTSPPSPIRQESSPIHPPNLNHMSSFHSLSDRAIQLYQQAASNPVDSLYGGQQPQLNPNYYQSTPNNASYPTIPYMSGTPAYNPMYAAASFAASNSLFSSDFFSRFHTEDMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQLKSTVHENNIQE Sbjct: 1 MDQVVVGTAASNLVRSGPNRLFAPTNCSLYSNVFTHSYLQQNIPNGSSNHPLGINHTQTAVSLPELDSFKIDAATALPGMALYSASSNSLSNTNNSHQTNFDSGSINEFSGSNQYCGGSRHLGFSYPAWYNSNIRIDACDESNGMTTTEQPHWSCSPYSTAVSDARNSLVFGMDCLANPSRTTIKQSSSPPSKVNFPIPDCMTSPPSPIRQESSPIHPPNLNHMSSFHSLSDRAIQLYQQAASNPVDSLYGGQQPQLNPNYYQSTPNNASYPTIPYMSGTPAYNPMYAAASFAASNSLFSSDFFSRFHTEDMLLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGSTDDQLKSTVHENNIQE 407
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Planmine SMEST
Match: SMESG000054107.1 (SMESG000054107.1) HSP 1 Score: 109.383 bits (272), Expect = 3.540e-26 Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 3 Query: 1200 LLDSGSLTEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKKLQTRKPGS 1436 +++ + E + R RKKRKPYTRYQ +VLESEF N+YITRQKRWEISCKL+LSERQ+KVWFQNRRMKKKKLQ +KP + Sbjct: 228 MMEQEYVPEMDHRCRKKRKPYTRYQNLVLESEFNSNSYITRQKRWEISCKLNLSERQIKVWFQNRRMKKKKLQIKKPST 306
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Planmine SMEST
Match: SMESG000022668.1 (SMESG000022668.1) HSP 1 Score: 98.9821 bits (245), Expect = 6.775e-24 Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 3 Query: 1224 EAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 E + + R KR+PY+RYQ MVLESE+ YI+RQKRW+I+CKL+LSERQ+K+WFQNRRMK KK Sbjct: 97 EKDQKERTKRRPYSRYQLMVLESEYINTEYISRQKRWDIACKLNLSERQIKIWFQNRRMKHKK 159
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Planmine SMEST
Match: SMESG000079807.1 (SMESG000079807.1) HSP 1 Score: 78.1814 bits (191), Expect = 1.375e-15 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 1221 TEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 +E+ ++ R+ YTRYQT+ LE EF N Y+TR++R EI+ L L+ERQ+K+WFQNRRMK KK Sbjct: 207 SESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKK 270
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Planmine SMEST
Match: SMESG000079807.1 (SMESG000079807.1) HSP 1 Score: 78.1814 bits (191), Expect = 1.590e-15 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 1221 TEAEMRSRKKRKPYTRYQTMVLESEFTGNAYITRQKRWEISCKLHLSERQVKVWFQNRRMKKKK 1412 +E+ ++ R+ YTRYQT+ LE EF N Y+TR++R EI+ L L+ERQ+K+WFQNRRMK KK Sbjct: 210 SESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKK 273 The following BLAST results are available for this feature:
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Hox class homeodomain protein DjAbd-Bb vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30013674 ID=SMED30013674|Name=Hox class homeodomain protein DjAbd-Bb|organism=Schmidtea mediterranea sexual|type=transcript|length=1766bpback to top protein sequence of SMED30013674-orf-1 >SMED30013674-orf-1 ID=SMED30013674-orf-1|Name=SMED30013674-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=413bp MDQVVVGTAASNLVRSGPNRLFAPTNCSLYSNVFTHSYLQQNIPNGSSNHback to top Aliases
The feature 'Hox class homeodomain protein DjAbd-Bb' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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