SWI:SNF matrix associated

Overview


Name	SWI:SNF matrix associated
Smed ID	SMED30013475
Length (bp)	3208

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of SWI:SNF matrix associated (SMED30013475) t-SNE clustered cells

Violin plots show distribution of expression levels for SWI:SNF matrix associated (SMED30013475) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SWI:SNF matrix associated (SMED30013475) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SWI:SNF matrix associated (SMED30013475) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30013475

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30013475	SMESG000013560.1	SmedASXL_013017	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30013475	SMESG000013560.1	SmedASXL_013017	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
nervous system	SMED30013475	SMESG000013560.1	dd_Smed_v4_3355_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30013475	SMESG000013560.1	dd_Smed_v4_3355_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30013475	SMESG000013560.1	dd_Smed_v4_3355_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30013475	SMESG000013560.1	dd_Smed_v4_3355_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30013475	SMESG000013560.1	dd_Smed_v4_3355_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30013475	SMESG000013560.1	Contig49344	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30013475	SMESG000013560.1	Contig49344	newmark_ests	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Human
Match: SMARCA5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101])

HSP 1 Score: 1272.69 bits (3292), Expect = 0.000e+0
Identity = 636/883 (72.03%), Postives = 759/883 (85.96%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW++EF RWVP+++ +CLIGD+E R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VL+PFLLRRIKADVEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPHDERQ SI+ YN+P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N++GK+E+L MI++GA ++F SK+++I DEDID +L RG +KTAEMN+KL ++GES+LR    D +     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P A   + EEQ KI EAESL + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE
Sbjct:  137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTES----SVYNFEGEDYREK--QKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPR-NPELPNAAQAQKEEQLKIDEAESLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERE 1011

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Human
Match: SMARCA1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097])

HSP 1 Score: 1259.97 bits (3259), Expect = 0.000e+0
Identity = 647/985 (65.69%), Postives = 794/985 (80.61%), Query Frame = 2

Query:  116 MEP-VKEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKF-----------SSSSIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK-------------GGNHAPESSGGQLVSK 2974
            M+P  +E ++ D+ K  E +L + E F+       +   T+P   K            S  S GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ER+ +I+ +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F SK++++ DEDI  +L RGE+KTAEMN++L ++GES+LR  + D ++    S+Y FEGEDYREK   K  M  WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   L + EEQ KI  AE LT  E  E+E+LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K                 A ESSG + V K
Sbjct:   79 MDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQ----SLYKFEGEDYREK--QKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRATKTPMSQKRKAESATESSGKKDVKK 1055

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Human
Match: SMARCA1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097])

HSP 1 Score: 1251.5 bits (3237), Expect = 0.000e+0
Identity = 647/997 (64.89%), Postives = 794/997 (79.64%), Query Frame = 2

Query:  116 MEP-VKEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKF-----------SSSSIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQI------------SIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK-------------GGNHAPESSGGQLVSK 2974
            M+P  +E ++ D+ K  E +L + E F+       +   T+P   K            S  S GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ER+             +I+ +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F SK++++ DEDI  +L RGE+KTAEMN++L ++GES+LR  + D ++S    +Y FEGEDYREK   K  M  WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   L + EEQ KI  AE LT  E  E+E+LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K                 A ESSG + V K
Sbjct:   79 MDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQS----LYKFEGEDYREK--QKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRATKTPMSQKRKAESATESSGKKDVKK 1067

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Human
Match: SMARCA1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097])

HSP 1 Score: 1248.8 bits (3230), Expect = 0.000e+0
Identity = 640/968 (66.12%), Postives = 786/968 (81.20%), Query Frame = 2

Query:  116 MEP-VKEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKF-----------SSSSIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQI------------SIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK 2926
            M+P  +E ++ D+ K  E +L + E F+       +   T+P   K            S  S GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ER+             +I+ +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F SK++++ DEDI  +L RGE+KTAEMN++L ++GES+LR  + D ++S    +Y FEGEDYREK   K  M  WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   L + EEQ KI  AE LT  E  E+E+LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K
Sbjct:   79 MDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQS----LYKFEGEDYREK--QKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEK 1038

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BLAST of SWI:SNF matrix associated vs. Ensembl Human
Match: CHD2 (chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1917])

HSP 1 Score: 453.366 bits (1165), Expect = 2.038e-142
Identity = 253/578 (43.77%), Postives = 359/578 (62.11%), Query Frame = 2

Query:  338 FEQSPYFV--------IGGE---MRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRV-----IREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTD--------YHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ----GRLVEQKN------NQLGKNEILDMIKYGANYIFR---SKDTDIRDEDIDVLLARGEQKTAEMN-KKLDELGESNLRQLKFDN 1957
             +Q P FV        +GGE   +RDYQ+ GLNWL   +  + + ILADEMGLGKT+QTIS + YL H   L GP LI+ P STL +W  EF  W P +  +  IGD  +R+ +     I  Q     ++ ++T+YE+ +K+K+ L   N+ +L +DEAHR+KN+ S L + +  FKS +RLLITGTPLQN+L ELW+LL+F+MPE F    +F++         E   Q LH VL+PFLLRR+K DVEK LP K E  + + +S LQ++ Y  IL ++   +   G +      LNI+M+L+KC NH YL       PP   +          L+ + GK++LLDKLL +L+E+G+R+L+FSQM RMLDIL +Y   + Y + RLDGS   + R+ ++D +N  GS+ F F+LSTRAGGLGINLA+AD V+++DSDWNPQ DLQAQ RAHRIGQ K V ++RL+T+ TVEE II RA+ K+ LD++VIQ+    GR + + N      N   K E+  ++K+GA  +F+    ++++ ++ DID +L   E +  E++    DEL    L Q K  N
Sbjct:  252 LKQRPRFVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG---RENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL-AKGTRGSTSGFLNIVMELKKCCNHCYLIK-----PPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDEL----LSQFKVAN 816

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BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
Match: isw-1 (Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877])

HSP 1 Score: 1142.87 bits (2955), Expect = 0.000e+0
Identity = 585/970 (60.31%), Postives = 739/970 (76.19%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFS--------KLKDGGTTPSKNKFSSSSI----GDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEET-LVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDG----WIQPPKRERKANYAVDQYFKDALRI-NEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATP-EAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSK 2998
            D  K  E +L K E FS        KL  G    +K +   S      GDHRH KTEQEE+E+++ +  +   +  F++SP+++  GEMRDYQ+RGLNWL  L  +  NGILADEMGLGKTLQTISMIGY+KHY+N   PHL+I PKSTLQNW NEF +W PS+  + LIGD+  R++V+R+ ILPQ +DV  T+YEM +K K+ LKK N+ Y+ IDEAHRIKNEKSKLSE VR   S+NRLLITGTPLQNNLHELWALLNFL+P++F SS +FD  F+ +++   T LVQRLH VL+PFLLRRIK+DVEK L PKKE+K+Y+GLS +QRE YTK+LMKDID++NGAG K +K RL+NILM LRKC NHPYLFDG EPGPP+TTD HLV+N GKMV+LDKLL K KEQGSR+L+FSQ +RMLD+LED+C WR Y+YCRLDGSTPH++R  +I+ YN P SKKF+FML+TRAGGLGINLATADVVI+YDSDWNPQ DLQA DRAHRIGQ K VRVFRLITENTV+ERII +AE KL+LDNIVIQQGR+ E +   LGK +++ MI++GA  +F +KD+ I D+DID +L + E KTAE+N+K+ ++ E+NLR + F+++    ++VY FEGE+Y+ K       DG    WI+PPKRERKANY VD Y+K+A+R  N  +       PK P V DFQF+P RLFELLDKEIY +RK+IGYV  +     P EAE  + EEQ  I  A  LT+ E  E+ ELL Q  T WTKR+FQQF++ NEKYGR+D+ESI+ ++E +  EE++ Y++VFW R  ELQD EK LSQIE+GEA+IQR+ A+K+ALD K+A+Y+APF QLRI YGTNKGK YTEEEDRFL+C  H+LG DK+NV++ LR +VR+APQFRFDWF++SRTA+ELQRRC+TLITLIERE+ ++ E S+         + S  + +SK+SG+ T+K
Sbjct:   44 DSFKRFERLLQKTENFSHCLSSGDAKLATGAPVDTKKRGRPSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAG-KVEKARLMNILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKT-LGKGDMISMIRHGAEQVFAAKDSTISDDDIDTILEKAEVKTAELNEKMGKIDENNLRNMTFEDN--AKFTVYQFEGENYKAKQA-----DGMGHFWIEPPKRERKANYQVDLYYKEAMRAGNPTEKQSKAPRPKLPQVFDFQFYPRRLFELLDKEIYHYRKTIGYVAERPKDVPPKEAEKRQAEEQKLINNARPLTDKEQEEKAELLTQSVTDWTKREFQQFVRGNEKYGREDLESIAKEME-RPLEEIQSYAKVFWERIEELQDSEKVLSQIEKGEARIQRKYAVKKALDAKIAKYKAPFQQLRISYGTNKGKTYTEEEDRFLVCETHRLGHDKENVFEELRQSVRMAPQFRFDWFLKSRTAMELQRRCNTLITLIEREMGEVVE-SKPVIVTAADKKKSVAKDLSKSSGTPTAK 1002

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BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
Match: swsn-4 (SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF53])

HSP 1 Score: 453.751 bits (1166), Expect = 1.809e-138
Identity = 247/526 (46.96%), Postives = 337/526 (64.07%), Query Frame = 2

Query:  374 MRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTF-KSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN-----------INSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELY---TKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPY------TTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQK 1888
            ++ YQI+GL W++ LY ++ NGILADEMGLGKT+QTIS++ YL   +   GP+L+I P STL NW NEF +W PSV  I   G ++ R RV   QI    ++V++T+YE  IKEK+ L K  + Y+ IDE HR+KN   KL+ ++  F  +Q+RLL+TGTPLQN L ELWALLNFL+P +F+S   F+  FN           +N  E   +++RLH VL+PFLLRR+K +VE +LP K E  I    S LQ+ +Y    K L+ D  + +GA        L+N ++ LRK  NHP+LF  IE                L+   GK+ LLD++L KLK  G RIL+F QMT M++I ED+  +R+Y Y RLDGST  DER   + ++N P S  FLFMLSTRAGGLG+NL TAD VI++DSDWNP  D+QAQDRAHRIGQ K VRV RLIT N+VEE+I+A A  KL +D  VIQ G+  +Q++    + ++L+ I   A+     ++    DE ++ ++AR E++
Sbjct:  533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDARRRV-EGQIRKGAFNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGARS------LMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKF-DQRSTGAERKQMLEQI-IQADGEEEEEEEVPDDETVNQMVARSEEE 1049

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BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
Match: pqn-15 (Prion-like-(Q/N-rich)-domain-bearing protein [Source:UniProtKB/TrEMBL;Acc:P91094])

HSP 1 Score: 447.203 bits (1149), Expect = 2.280e-133
Identity = 251/561 (44.74%), Postives = 356/561 (63.46%), Query Frame = 2

Query:  353 YFVIGG-----EMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPG------PPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDES 1966
            +F++GG     +++ YQI+GL W++ L+ ++ NGILADEMGLGKT+QTI+ I YL   +   GP L+I P ST+ NW NEF +W  +V  I   G +ETR +V    I    ++V++T++E  I+EK+ L K  + Y+ IDE HR+KN+  KL+E++ T F+ Q RLLITGTPLQN L ELWALLNFL+P +F+S + F+  FN         +   +EET+  ++RLH VL+PFLLRR+K +VE  LP K E  +   +S LQ+ LY K + K + L++G      K  L N ++ LRK  NHP+LF+ +E          + +   L    GK+ LL ++L KL+  G R+L+F QMT M+ I+ED+       Y RLDGST  DER   +D++N P S+ FLFMLSTRAGGLG+NL TAD VI++DSDWNP  D+QAQDRAHRIGQ   VRVFRLIT N+VEE+I+A A  KL +D  VIQ G+  + ++    + EIL+ I           +    DEDI+ +L+R E++  E+ +K+D        Q +F+N+++
Sbjct: 1189 HFMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPKETR-KVFEPIIKSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLY-KHMQKGL-LLDGKTNTGSKS-LRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGKF-DNRSTGAERREILENI-IKTENESEEDEEVPNDEDINDILSRSEEE-FELFQKMD--------QERFENEQA 1734

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BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
Match: chd-1 (Chromodomain and Helicase Domain protein [Source:UniProtKB/TrEMBL;Acc:O17909])

HSP 1 Score: 432.565 bits (1111), Expect = 9.887e-131
Identity = 241/552 (43.66%), Postives = 349/552 (63.22%), Query Frame = 2

Query:  335 RFEQSPYFV-IGGE----MRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDW----------DVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDI-DLVNGAGGKSDKVRLLNILMQLRKCTNHPYL---FDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ----GRLVEQKNNQ------LGKNEILDMIKYGANYIFRSKDTDIRDE--DIDVLLARGEQKTAE 1897
            +FE  P F+   GE    +RDYQ+ GLNW++  +    + ILADEMGLGKT+Q+IS++  L H  +L GP+L++ P ST+  W  EF +W P +  +  +GD      V R+ I   +W          + I+T+YE+ +K+K+ L   ++  L +DEAHR+KN++S L + +  F+  ++LLITGTPLQN+L ELWALL+F+MPE F     F+   N ++      +  LH  L+PFLLRR+K DVEK LPPK E  + + ++  Q++ Y  IL K+  +L  G  G  +    +N++M+L+KC NH  L   +D I           L+++ GK++LLDKLL +LK++G R+L+FSQM  MLDIL++Y   R++   RLDGS   D R+ ++D YN PGS  F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQA  RAHRIGQTKTV ++RL+T+ +VEE I+ RA+ KL LD++VIQ+    G+ V  KN          K E+  ++K+GA  +F+ K+ + ++   DID +L   E + AE
Sbjct:  387 KFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDV-----VSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESN---HKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSING--FVNLVMELKKCCNHASLTRQYDHIYDDAQGRLQ-QLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVELFKEKEGEEQEPEVDIDRILMGAETREAE 927

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BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
Match: chd-3 (Chromodomain-helicase-DNA-binding protein 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q22516])

HSP 1 Score: 422.55 bits (1085), Expect = 9.748e-126
Identity = 224/537 (41.71%), Postives = 334/537 (62.20%), Query Frame = 2

Query:  326 IVNRFEQSPYFV--IGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQIL----------PQ----------DWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLF-DGIEPGPPYTTDYH----LVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDED 1855
            I+ ++E  P F+   GG +  YQ+ G+NWL   + + T+ ILADEMGLGKT+Q+++ +  L    +  GP LI  P ST+ NW  E   W P    +  +GD+E+R  VIRE             P+           + V++TSYE    +K+ L   ++  L +DEAHR+KN +S   + +R +  Q R+L+TGTPLQNNL EL+ LLNFL P+ F    +F   F+   + +E  +++LH++L P +LRR+KADV   +P K+E+ + + LS +Q++ Y  IL ++ D +N   G + ++ L+NI+M+L+KC NHPYLF       P      +    L++N GK VLL K+L KLK+ G R+L+FSQMT MLDILED+C    Y Y R+DGS    +RQ +ID YN PG+K+F+F+LSTRAGGLGINLATAD VI+YDSDWNP  D+QA  RAHR+GQ   V ++R +T+ +VEERI + A+ K+ L ++V++ G L  +    + K E+ D++++G   +F+ ++  +   D
Sbjct:  598 ILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESR-MVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFS--EISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGT-QMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAG-LGAKDGKSMSKTELDDVLRWGTEELFKEEEAPVEGAD 1129

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BLAST of SWI:SNF matrix associated vs. Ensembl Fly
Match: Iswi (gene:FBgn0011604 transcript:FBtr0087841)

HSP 1 Score: 1280.77 bits (3313), Expect = 0.000e+0
Identity = 637/931 (68.42%), Postives = 765/931 (82.17%), Query Frame = 2

Query:  137 VEFDKKKTIECILSKAEQFSK-LKDGGTTPSKNK---------FSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFD-NDESGVYSVYNFEGEDYREKAVSKFDMDG-WIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            +E D+ +  + +L + E F+  + +   +P+K K              + DHRH KTEQEE+E+LL E      + RF+ SP ++  GEMRDYQIRGLNW+I LY +  NGILADEMGLGKTLQTIS++GYLKH++N  GPH++I PKSTLQNW+NEF +W PS++ +CLIGDQ+TR+  IR+ ++P +WDV VTSYEMCI+EKS  KKFN+ YL IDEAHRIKNEKSKLSEI+R FK+ NRLLITGTPLQNNLHELWALLNFL+P++F SS +FD+ FN N+ L ++ L+ RLH+VLKPFLLRR+KA+VEKRL PKKE+KI++GLS +QR+ YTK+L+KDID+VNGAG K +K+RL NILMQLRKCTNHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL+EQGSR+L+FSQMTRMLDILEDYC WR Y+YCRLDG TPH++R   I E+N   S KFLFMLSTRAGGLGINLATADVVI+YDSDWNPQ+DLQA DRAHRIGQ K VRVFRLITE+TVEE+I+ RAE+KL+LD +VIQ GRLV+ ++NQL K+E+L++I++GAN +F SK+TDI DEDIDV+L RGE KTAE    LD LGES+LR    D N E+G  SVY FEGED+REK   K +  G WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP VQDFQFFPPRLFELLD+EIY FRK++GY VPK      +A   + EEQ KI EAE LTE E+ E+E LL QGFT WTKRDF QFIKANEKYGRDDI++I+ DVEGKTPEEV +Y+ VFW RC ELQD+E+ + QIERGE KIQRR++IK+ALD KM+RYRAPFHQLR+QYG NKGKNYTE EDRFL+CMLHKLGFDK+NVY+ LR A+R +PQFRFDWFI+SRTA+ELQRRC+TLITLIERE
Sbjct:   39 IEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAG-KVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWREK--QKLNALGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLIERE 966

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BLAST of SWI:SNF matrix associated vs. Ensembl Fly
Match: Iswi (gene:FBgn0011604 transcript:FBtr0087842)

HSP 1 Score: 1280.77 bits (3313), Expect = 0.000e+0
Identity = 637/931 (68.42%), Postives = 765/931 (82.17%), Query Frame = 2

Query:  137 VEFDKKKTIECILSKAEQFSK-LKDGGTTPSKNK---------FSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFD-NDESGVYSVYNFEGEDYREKAVSKFDMDG-WIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            +E D+ +  + +L + E F+  + +   +P+K K              + DHRH KTEQEE+E+LL E      + RF+ SP ++  GEMRDYQIRGLNW+I LY +  NGILADEMGLGKTLQTIS++GYLKH++N  GPH++I PKSTLQNW+NEF +W PS++ +CLIGDQ+TR+  IR+ ++P +WDV VTSYEMCI+EKS  KKFN+ YL IDEAHRIKNEKSKLSEI+R FK+ NRLLITGTPLQNNLHELWALLNFL+P++F SS +FD+ FN N+ L ++ L+ RLH+VLKPFLLRR+KA+VEKRL PKKE+KI++GLS +QR+ YTK+L+KDID+VNGAG K +K+RL NILMQLRKCTNHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL+EQGSR+L+FSQMTRMLDILEDYC WR Y+YCRLDG TPH++R   I E+N   S KFLFMLSTRAGGLGINLATADVVI+YDSDWNPQ+DLQA DRAHRIGQ K VRVFRLITE+TVEE+I+ RAE+KL+LD +VIQ GRLV+ ++NQL K+E+L++I++GAN +F SK+TDI DEDIDV+L RGE KTAE    LD LGES+LR    D N E+G  SVY FEGED+REK   K +  G WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP VQDFQFFPPRLFELLD+EIY FRK++GY VPK      +A   + EEQ KI EAE LTE E+ E+E LL QGFT WTKRDF QFIKANEKYGRDDI++I+ DVEGKTPEEV +Y+ VFW RC ELQD+E+ + QIERGE KIQRR++IK+ALD KM+RYRAPFHQLR+QYG NKGKNYTE EDRFL+CMLHKLGFDK+NVY+ LR A+R +PQFRFDWFI+SRTA+ELQRRC+TLITLIERE
Sbjct:   39 IEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAG-KVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWREK--QKLNALGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLIERE 966

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Fly
Match: Iswi (gene:FBgn0011604 transcript:FBtr0087843)

HSP 1 Score: 1280.77 bits (3313), Expect = 0.000e+0
Identity = 637/931 (68.42%), Postives = 765/931 (82.17%), Query Frame = 2

Query:  137 VEFDKKKTIECILSKAEQFSK-LKDGGTTPSKNK---------FSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFD-NDESGVYSVYNFEGEDYREKAVSKFDMDG-WIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            +E D+ +  + +L + E F+  + +   +P+K K              + DHRH KTEQEE+E+LL E      + RF+ SP ++  GEMRDYQIRGLNW+I LY +  NGILADEMGLGKTLQTIS++GYLKH++N  GPH++I PKSTLQNW+NEF +W PS++ +CLIGDQ+TR+  IR+ ++P +WDV VTSYEMCI+EKS  KKFN+ YL IDEAHRIKNEKSKLSEI+R FK+ NRLLITGTPLQNNLHELWALLNFL+P++F SS +FD+ FN N+ L ++ L+ RLH+VLKPFLLRR+KA+VEKRL PKKE+KI++GLS +QR+ YTK+L+KDID+VNGAG K +K+RL NILMQLRKCTNHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL+EQGSR+L+FSQMTRMLDILEDYC WR Y+YCRLDG TPH++R   I E+N   S KFLFMLSTRAGGLGINLATADVVI+YDSDWNPQ+DLQA DRAHRIGQ K VRVFRLITE+TVEE+I+ RAE+KL+LD +VIQ GRLV+ ++NQL K+E+L++I++GAN +F SK+TDI DEDIDV+L RGE KTAE    LD LGES+LR    D N E+G  SVY FEGED+REK   K +  G WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP VQDFQFFPPRLFELLD+EIY FRK++GY VPK      +A   + EEQ KI EAE LTE E+ E+E LL QGFT WTKRDF QFIKANEKYGRDDI++I+ DVEGKTPEEV +Y+ VFW RC ELQD+E+ + QIERGE KIQRR++IK+ALD KM+RYRAPFHQLR+QYG NKGKNYTE EDRFL+CMLHKLGFDK+NVY+ LR A+R +PQFRFDWFI+SRTA+ELQRRC+TLITLIERE
Sbjct:   39 IEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAG-KVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWREK--QKLNALGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLIERE 966

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BLAST of SWI:SNF matrix associated vs. Ensembl Fly
Match: brm (gene:FBgn0000212 transcript:FBtr0333580)

HSP 1 Score: 448.743 bits (1153), Expect = 1.788e-135
Identity = 245/543 (45.12%), Postives = 351/543 (64.64%), Query Frame = 2

Query:  356 FVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEP-------GPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLD 1915
             ++ G +++YQI+GL WL+ LY ++ NGILADEMGLGKT+QTIS++ YL   + + GP+LII P STL NW+ EF +W P+V  +   G  + R R+++ Q+    ++V++T+YE  IK+K+ L K  + Y+ IDE HR+KN   KL++++ T + +  RLL+TGTPLQN L ELWALLNFL+P +F S + F+  FN         +   EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  I   +S LQR LY  +  K + L +G+     GK     L+N ++QLRK  NHP++F  IE        G    +   L    GK  LLD++L KLK    R+LLF QMT+ + I+EDY  WR++ Y RLDG+T  ++R   + ++N  GS  F+F+LSTRAGGLG+NL TAD V+++DSDWNP  DLQAQDRAHRIGQ   VRV RL+T N+VEERI+A A  KL +D  VIQ G + +QK+    + + L  I +  +     ++    DE I++++AR E++  E+ K++D
Sbjct:  771 IMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGR-RLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEI-EIFKRMD 1310

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Fly
Match: brm (gene:FBgn0000212 transcript:FBtr0075524)

HSP 1 Score: 448.358 bits (1152), Expect = 2.068e-135
Identity = 245/543 (45.12%), Postives = 351/543 (64.64%), Query Frame = 2

Query:  356 FVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEP-------GPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLD 1915
             ++ G +++YQI+GL WL+ LY ++ NGILADEMGLGKT+QTIS++ YL   + + GP+LII P STL NW+ EF +W P+V  +   G  + R R+++ Q+    ++V++T+YE  IK+K+ L K  + Y+ IDE HR+KN   KL++++ T + +  RLL+TGTPLQN L ELWALLNFL+P +F S + F+  FN         +   EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  I   +S LQR LY  +  K + L +G+     GK     L+N ++QLRK  NHP++F  IE        G    +   L    GK  LLD++L KLK    R+LLF QMT+ + I+EDY  WR++ Y RLDG+T  ++R   + ++N  GS  F+F+LSTRAGGLG+NL TAD V+++DSDWNP  DLQAQDRAHRIGQ   VRV RL+T N+VEERI+A A  KL +D  VIQ G + +QK+    + + L  I +  +     ++    DE I++++AR E++  E+ K++D
Sbjct:  763 IMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGR-RLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEI-EIFKRMD 1302

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
Match: smarca1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296])

HSP 1 Score: 1251.5 bits (3237), Expect = 0.000e+0
Identity = 632/991 (63.77%), Postives = 784/991 (79.11%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSS-----------SIGDHRH--SXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREK----------------AVSK---FDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSKHKA 3007
            D+    E +L + E F+       +   T+P K K               S+GD+RH  ++ E++EE    +    +V+V RFE+SP ++  G +RDYQIRGLNW+I LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVP++K +CLIG+++ R+  IR+ ++P +WDV VTSYEM I+EKS  KKFN+ YL IDEAHRIKNEKSKLSEI R FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+++FD  F+ N L ++ LV+RLH+VL+PFLLRRIKA+VEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N A GK DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV LDKLL K++EQGSR+L+FSQMTR+LDILEDYC+WR ++YCRLDG+TPH+ R+ +ID +N P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQ K V+VFRLIT+NTVEERI+ RAEMKL+LD+IVIQQGRL++Q+ N+LGK+E+L MI++GA ++F SKD+++ DEDID +L RG +KTAEMN+++  LGES+LR    D   +   S+YNFEGEDYREK                AV K     +  WI+PPKRERKANYAVD YF++ALR++EP+APKAPRPPKQP++QDFQFFPPRLFELL+ EI  +RK+IGY VP+       A++++ EEQ KI EAE L+  E  E+E+LL QGFT W KRDF QFIKANEKYGRDDI++I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD+K+ARY+APFHQLRIQYGTNKGKNYTEEEDRFLICMLHK+GFDK+ VY+ LR  VR APQFRFDWFI+SRTA+ELQRRC+TLI+LIE+E  ++EEK R  K     P+    Q       S   + KA
Sbjct:   50 DRANRFEFLLKQTELFAHFIQPASQKSPTSPLKVKMGRPRIKQDEKQNLLSVGDNRHRRTEQEEDEELLSESRKADNVLV-RFEESPSYIKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNCLGDQKLVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSA-GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSIVIQQGRLIDQQ-NKLGKDEMLQMIRHGATHVFASKDSELTDEDIDTILERGAKKTAEMNERMQNLGESSLRNFTVDTGATET-SLYNFEGEDYREKQKVGVFIFGHLIFVHIAVLKSINLSLIEWIEPPKRERKANYAVDAYFREALRVSEPRAPKAPRPPKQPNIQDFQFFPPRLFELLEMEILYYRKTIGYKVPRSPDIPNSAQVQK-EEQRKIDEAEPLSPEETEEKEKLLTQGFTNWNKRDFNQFIKANEKYGRDDIDNIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDVKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKEYVYEELRQCVRNAPQFRFDWFIKSRTAMELQRRCNTLISLIEKENMEIEEKERAEK-KRRTPKGQSAQKRKAEVSSEKKEKKA 1034

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BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
Match: smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1])

HSP 1 Score: 1244.95 bits (3220), Expect = 0.000e+0
Identity = 643/943 (68.19%), Postives = 771/943 (81.76%), Query Frame = 2

Query:  128 KEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSSSI-----------GDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDL 2902
            +E V+ D+    E +L + E F+       +   T+P K K     I           GD+RH +TEQEE+E+LL+E  +   +  RF+ SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW+NEF RWVPS+K +CLIGD+E R+  IR+ +LP +WDV VTSYEM I E++  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F SS +FD  F+ N+ L +  LV+RLH+VL+PFLLRRIKADVEK L PKKEIKIY+GLS +QRE YTKILMKDID++N AG K DK+RLLN+LMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y YCRLDG TPH+ERQISI+ +N+P S KFLFMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQ K VRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+   N+LGK+E+L +I++GA ++F SK+++I DEDID +L RGE+KT EM +K+  LGE +LR    D +     SVYNFEGEDYREK   K  +  WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+       AE+++ EEQ KI EAE L E E+ E+E LL QGFT WTKRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK++VYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE  +L
Sbjct:   64 EEKVQTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDNRHRRTEQEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAG-KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEMLSIIRHGATHVFASKESEITDEDIDGILERGERKTMEMKEKMANLGEGSLRNFTMDTEN----SVYNFEGEDYREK---KKVVTNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDLPNSAEMQK-EEQAKIDEAEPLNEEELEEKENLLSQGFTIWTKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMEL 997

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BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
Match: chd1l (chromodomain helicase DNA binding protein 1-like [Source:NCBI gene;Acc:393283])

HSP 1 Score: 452.21 bits (1162), Expect = 1.857e-141
Identity = 244/553 (44.12%), Postives = 355/553 (64.20%), Query Frame = 2

Query:  374 MRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQD--WDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS--LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGR--LVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLAR---GEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDY 2005
            +R YQ+ G+ WL     +    IL DEMGLGKT QTIS++ Y +    + GP L++ P + L+NW  E  R+ PS+  IC  GD+E R+ +  +Q L  D  + V++T+YEMC+K+   LK + +  L +DEAHR+KN++S L + ++ F    R+L+TGTP+QNNL E+++LL F+ P +F   A  +D  N  +    E  LV  LH VL+PFLLRR+KA+V   LP K E+ ++ GLS LQ+  Y  ILM+D+D       +S K RLLN+LMQLRKC +HPYLFDG+EP  P+    HLVE  GK+ LLD +L  L+E G  +LLFSQMTRMLDIL+DY  +R Y Y RLDGS   +ER ++I  ++      F+F+LST+AGG+G+NL  AD VI  D D+NPQ DLQA  RAHRIGQT+ V+V RL+  +T+EE I +RA  KL+L + VI++GR  L++Q  +     ++ +++K+G + +  S+++ ++D D+ ++L +   G+  T E + KL+E  E     ++  N       +Y FEG+DY
Sbjct:   35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKERRAEL--QQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEA-VEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFR--TDQSTKTRLLNVLMQLRKCVDHPYLFDGVEP-EPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFST--KDVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSVQDVDLQLILGQSRDGQWLTDEEHAKLNESNEEEDEDMEGQN------HMYYFEGKDY 573

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BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
Match: SMARCA4 (transcription activator BRG1-like [Source:NCBI gene;Acc:100535713])

HSP 1 Score: 446.432 bits (1147), Expect = 4.708e-135
Identity = 237/520 (45.58%), Postives = 330/520 (63.46%), Query Frame = 2

Query:  323 VIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHL------------VENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMI 1798
             +  R ++    +I G+++ YQI+GL WL+ LY ++ NGILADEMGLGKT+QTI++I YL  Y+ L GP+LII P STL NW+ EF +W PSV  +   G    R R    Q+    ++V++T+YE  IK+K  L K  + Y+ +DE HR+KN   KL++++ T + +  R+L+TGTPLQN L ELWALLNFL+P +F S + F+  FN         ++  EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  I   +S LQR LY  +  K + L +G+     GK     L+N +MQLRK  NHPY+F  IE     T   HL                GK  +LD++L KL+    ++LLF QMT ++ I+EDY  +R + Y RLDG+T  ++R + +  +N P S+ F+F+LSTRAGGLG+NL +AD VI++DSDWNP  DLQAQDRAHRIGQ   VRV RL T N+VEE+I+A A+ KL +D  VIQ G + +QK++   +   L  I
Sbjct:  690 AVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIE----ETFSEHLGFSGGIVQGLDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPASQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQLNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAI 1203

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BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
Match: smarca2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964])

HSP 1 Score: 443.351 bits (1139), Expect = 7.214e-134
Identity = 243/544 (44.67%), Postives = 343/544 (63.05%), Query Frame = 2

Query:  323 VIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEP------GPP--YTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGE 1882
             ++ R ++   F+I G ++ YQI+GL W++ LY ++ NGILADEMGLGKT+QTI +I YL  ++ L GP+LII P STL NW+ E  +W PS+  I   G    R R +  Q+    ++V++T+YE  IK+K  L K  + Y+ +DE HR+KN   KL++++ T + +  RLL+TGTPLQN L ELWALLNFL+P +F S + F+  FN         ++  EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  I   +S +Q+ LY  +  K I L +G+     GK     L+N +MQL+K  NHPY+F  IE       G P    +   L    GK  LLD++L KLK    R+LLF QMT ++ ILEDY  +R + Y RLDG+T  ++R + + ++N+ GS+ F+F+LSTRAGGLG+NL  AD V+++DSDWNP  DLQAQDRAHRIGQ   VRV RL T N+VEE+I+A A+ KL +D  VIQ G + +QK++   +   L  I          +D    DE ++ ++AR E
Sbjct:  709 AVIERVDKQSTFLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMR-RSLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAILEHEEQNM-EEDEVPDDETLNQMIARNE 1249

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BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
Match: mettl6 (methyltransferase like 6 [Source:Xenbase;Acc:XB-GENE-5809155])

HSP 1 Score: 1268.45 bits (3281), Expect = 0.000e+0
Identity = 635/880 (72.16%), Postives = 753/880 (85.57%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLI 2881
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V GG +RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYR++PGPH+++ PKSTL NW+ EF RWVPS+  ICLIGD++ R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VLKPFLLRRIKADVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K+DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL +LKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ERQ SI  YN PGS KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N+LGK+E+L MI++GA ++F SKD++I +EDI+ +L RGE+KTAEMN+KL  +GES+LR    DN+     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P A   + EEQ KI EAE L + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLI
Sbjct:  133 SMGDYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKGGTLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWVPSLCAICLIGDKDHRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLVERLHMVLKPFLLRRIKADVEKSLPPKKEIKIYVGLSKMQREWYTKILMKDIDILNSSG-KTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAYNAPGSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRYITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITEEDINAILERGEKKTAEMNEKLSNMGESSLRNFTVDNES----SVYNFEGEDYREK--QKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLI 1004

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BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
Match: mettl6 (methyltransferase like 6 [Source:Xenbase;Acc:XB-GENE-5809155])

HSP 1 Score: 1242.25 bits (3213), Expect = 0.000e+0
Identity = 625/874 (71.51%), Postives = 743/874 (85.01%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREK-AVSK------FDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAI 2842
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V GG +RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYR++PGPH+++ PKSTL NW+ EF RWVPS+  ICLIGD++ R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VLKPFLLRRIKADVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K+DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL +LKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ERQ SI  YN PGS KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N+LGK+E+L MI++GA ++F SKD++I +EDI+ +L RGE+KTAEMN+KL  +GES+LR    DN+     SVYNFEGEDYREK  VS       F +  WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P A   + EEQ KI EAE L + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+
Sbjct:   62 SMGDYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKGGTLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWVPSLCAICLIGDKDHRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLVERLHMVLKPFLLRRIKADVEKSLPPKKEIKIYVGLSKMQREWYTKILMKDIDILNSSG-KTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAYNAPGSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRYITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITEEDINAILERGEKKTAEMNEKLSNMGESSLRNFTVDNES----SVYNFEGEDYREKQKVSHIFHRCVFSLTEWIEPPKRERKANYAVDAYFREALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAM 929

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
Match: mettl6 (methyltransferase like 6 [Source:Xenbase;Acc:XB-GENE-5809155])

HSP 1 Score: 1241.1 bits (3210), Expect = 0.000e+0
Identity = 623/867 (71.86%), Postives = 740/867 (85.35%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAI 2842
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V GG +RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYR++PGPH+++ PKSTL NW+ EF RWVPS+  ICLIGD++ R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VLKPFLLRRIKADVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K+DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL +LKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ERQ SI  YN PGS KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N+LGK+E+L MI++GA ++F SKD++I +EDI+ +L RGE+KTAEMN+KL  +GES+LR    DN+     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P A   + EEQ KI EAE L + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+
Sbjct:   85 SMGDYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKGGTLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWVPSLCAICLIGDKDHRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLVERLHMVLKPFLLRRIKADVEKSLPPKKEIKIYVGLSKMQREWYTKILMKDIDILNSSG-KTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAYNAPGSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRYITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITEEDINAILERGEKKTAEMNEKLSNMGESSLRNFTVDNES----SVYNFEGEDYREKQKVK-----WIEPPKRERKANYAVDAYFREALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAM 940

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
Match: mettl6 (methyltransferase like 6 [Source:Xenbase;Acc:XB-GENE-5809155])

HSP 1 Score: 1239.17 bits (3205), Expect = 0.000e+0
Identity = 608/840 (72.38%), Postives = 718/840 (85.48%), Query Frame = 2

Query:  326 IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAI 2842
            +  RFE SP +V GG +RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYR++PGPH+++ PKSTL NW+ EF RWVPS+  ICLIGD++ R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VLKPFLLRRIKADVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K+DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL +LKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ERQ SI  YN PGS KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N+LGK+E+L MI++GA ++F SKD++I +EDI+ +L RGE+KTAEMN+KL  +GES+LR    DN+     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P A   + EEQ KI EAE L + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+
Sbjct:   36 VCTRFEDSPSYVKGGTLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWVPSLCAICLIGDKDHRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLVERLHMVLKPFLLRRIKADVEKSLPPKKEIKIYVGLSKMQREWYTKILMKDIDILNSSG-KTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAYNAPGSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRYITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITEEDINAILERGEKKTAEMNEKLSNMGESSLRNFTVDNES----SVYNFEGEDYREK--QKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAM 867

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
Match: anxa4 (annexin A4 [Source:Xenbase;Acc:XB-GENE-854498])

HSP 1 Score: 1229.93 bits (3181), Expect = 0.000e+0
Identity = 620/920 (67.39%), Postives = 755/920 (82.07%), Query Frame = 2

Query:  137 VEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSSSI-----------GDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAI 2842
            ++ D+ K  E +L + E F+       +   T+P K K     I           GD+RH +TEQEE+E+LL+E+++   +  RFE+SP ++ GG +RDYQ+RGLNW+I LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RW+PS+  +CLIGD+  R+  IR+ ++P +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH+VLKPFLLRRIKA+VEK LPPKKE+KIY+GL  +QRE YTKILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL K KEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH++R+++   +N P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQ KTVRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K+E+L MI++GA ++F SKD+++ DEDI  +L RGE+KTAEM ++L ++GES+LR    D +     S+YNFEGEDYREK   K  M  WI+PPKRERKANYAVD YF+DALR++EP+ PKAPRPPKQP++QDFQFFPPRLFELL+KEI  +RK+IGY VP+  S  P A   + EEQ KI EAE L   E  E+E+LL QGFT W KRDF QFIKANEKYGRDDI++I+ +VEGKTPEEV  YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGTNKGKNYTEEEDRFLICMLHK+GFDK+NVY+ LR  VR APQFRFDWFI+SRTA+
Sbjct:   33 IKTDRSKRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKLGRPKIKKDEKQNLLSAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEESPSYIKGGTLRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWIPSLCAVCLIGDKNARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLGKMQREWYTKILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVYNSGKMVVLDKLLPKFKEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRLDGQTPHEQREVNTITFNSPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKTVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKDSELTDEDITTILERGERKTAEMAERLQKMGESSLRNFSVDTET----SLYNFEGEDYREK--QKLSMMEWIEPPKRERKANYAVDAYFRDALRVSEPRVPKAPRPPKQPNIQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-SSDLPNASQIQKEEQRKIDEAEPLCSEESEEKEKLLTQGFTNWNKRDFNQFIKANEKYGRDDIDNIAREVEGKTPEEVMDYSGVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFRFDWFIKSRTAM 944

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
Match: Smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:MGI Symbol;Acc:MGI:1935129])

HSP 1 Score: 1268.06 bits (3280), Expect = 0.000e+0
Identity = 634/883 (71.80%), Postives = 757/883 (85.73%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW++EF +WVP+++ +CLIGD+E R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VL+PFLLRRIKADVEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPHDERQ SI+ YN+P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N++GK+E+L MI++GA ++F SK+++I DEDID +L RG +KTAEMN+KL ++GES+LR    D +     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+     P A   + EEQ KI EAE L + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE
Sbjct:  136 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTES----SVYNFEGEDYREK--QKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRSPD-LPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERE 1010

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
Match: Smarca1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:MGI Symbol;Acc:MGI:1935127])

HSP 1 Score: 1267.29 bits (3278), Expect = 0.000e+0
Identity = 634/971 (65.29%), Postives = 785/971 (80.84%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSS-----------SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSKHK 3004
            D+ K  E +L + E F+       +   T+P   K +             S+GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV LDKLL ++KEQGSR+L+FSQMTR+LDILEDYC+WR Y+Y RLDG TPH+ER+ +ID +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F  K++++ DEDI  +L RGE+KTAEMN+++ ++GES+LR  + D ++    S+Y FEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   + + EEQ KI  AE LT  E  E+++LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K    A ++   Q     S + +S  K
Sbjct:   94 DRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARPRVKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESELTDEDIVTILERGEKKTAEMNERMQKMGESSLRNFRMDLEQ----SLYKFEGEDYREK--QKLGTVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPEIPNPAIAQREEQKKIDGAEPLTPQETEEKDKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEK-KKRATKTPMSQKRKAESATESSGRK 1055

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
Match: Smarca1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:MGI Symbol;Acc:MGI:1935127])

HSP 1 Score: 1266.14 bits (3275), Expect = 0.000e+0
Identity = 629/945 (66.56%), Postives = 776/945 (82.12%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSS-----------SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK 2926
            D+ K  E +L + E F+       +   T+P   K +             S+GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV LDKLL ++KEQGSR+L+FSQMTR+LDILEDYC+WR Y+Y RLDG TPH+ER+ +ID +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F  K++++ DEDI  +L RGE+KTAEMN+++ ++GES+LR  + D ++    S+Y FEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   + + EEQ KI  AE LT  E  E+++LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K
Sbjct:   94 DRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARPRVKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESELTDEDIVTILERGEKKTAEMNERMQKMGESSLRNFRMDLEQ----SLYKFEGEDYREK--QKLGTVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPEIPNPAIAQREEQKKIDGAEPLTPQETEEKDKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEK 1030

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
Match: Smarca1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:MGI Symbol;Acc:MGI:1935127])

HSP 1 Score: 1266.14 bits (3275), Expect = 0.000e+0
Identity = 629/945 (66.56%), Postives = 776/945 (82.12%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSS-----------SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK 2926
            D+ K  E +L + E F+       +   T+P   K +             S+GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV LDKLL ++KEQGSR+L+FSQMTR+LDILEDYC+WR Y+Y RLDG TPH+ER+ +ID +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F  K++++ DEDI  +L RGE+KTAEMN+++ ++GES+LR  + D ++    S+Y FEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   + + EEQ KI  AE LT  E  E+++LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K
Sbjct:   94 DRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARPRVKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESELTDEDIVTILERGEKKTAEMNERMQKMGESSLRNFRMDLEQ----SLYKFEGEDYREK--QKLGTVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPEIPNPAIAQREEQKKIDGAEPLTPQETEEKDKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEK 1030

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
Match: Smarca1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:MGI Symbol;Acc:MGI:1935127])

HSP 1 Score: 887.1 bits (2291), Expect = 0.000e+0
Identity = 442/698 (63.32%), Postives = 553/698 (79.23%), Query Frame = 2

Query:  116 MEP-VKEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSS-----------SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQI------------SIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRI 2116
            M+P  +E ++ D+ K  E +L + E F+       +   T+P   K +             S+GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N + GK DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV LDKLL ++KEQGSR+L+FSQMTR+LDILEDYC+WR Y+Y RLDG TPH+ER+             +ID +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F  K++++ DEDI  +L RGE+KTAEMN+++ ++GES+LR  + D ++    S+Y FEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR+
Sbjct:   78 MDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARPRVKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLN-SSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREDKFLEVELLGQREAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESELTDEDIVTILERGEKKTAEMNERMQKMGESSLRNFRMDLEQ----SLYKFEGEDYREK--QKLGTVEWIEPPKRERKANYAVDAYFREALRV 768

[Close]

BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
Match: sp|Q24368|ISWI_DROME (Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila melanogaster OX=7227 GN=Iswi PE=1 SV=1)

HSP 1 Score: 1280.77 bits (3313), Expect = 0.000e+0
Identity = 637/931 (68.42%), Postives = 765/931 (82.17%), Query Frame = 2

Query:  137 VEFDKKKTIECILSKAEQFSK-LKDGGTTPSKNK---------FSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFD-NDESGVYSVYNFEGEDYREKAVSKFDMDG-WIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            +E D+ +  + +L + E F+  + +   +P+K K              + DHRH KTEQEE+E+LL E      + RF+ SP ++  GEMRDYQIRGLNW+I LY +  NGILADEMGLGKTLQTIS++GYLKH++N  GPH++I PKSTLQNW+NEF +W PS++ +CLIGDQ+TR+  IR+ ++P +WDV VTSYEMCI+EKS  KKFN+ YL IDEAHRIKNEKSKLSEI+R FK+ NRLLITGTPLQNNLHELWALLNFL+P++F SS +FD+ FN N+ L ++ L+ RLH+VLKPFLLRR+KA+VEKRL PKKE+KI++GLS +QR+ YTK+L+KDID+VNGAG K +K+RL NILMQLRKCTNHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL+EQGSR+L+FSQMTRMLDILEDYC WR Y+YCRLDG TPH++R   I E+N   S KFLFMLSTRAGGLGINLATADVVI+YDSDWNPQ+DLQA DRAHRIGQ K VRVFRLITE+TVEE+I+ RAE+KL+LD +VIQ GRLV+ ++NQL K+E+L++I++GAN +F SK+TDI DEDIDV+L RGE KTAE    LD LGES+LR    D N E+G  SVY FEGED+REK   K +  G WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP VQDFQFFPPRLFELLD+EIY FRK++GY VPK      +A   + EEQ KI EAE LTE E+ E+E LL QGFT WTKRDF QFIKANEKYGRDDI++I+ DVEGKTPEEV +Y+ VFW RC ELQD+E+ + QIERGE KIQRR++IK+ALD KM+RYRAPFHQLR+QYG NKGKNYTE EDRFL+CMLHKLGFDK+NVY+ LR A+R +PQFRFDWFI+SRTA+ELQRRC+TLITLIERE
Sbjct:   39 IEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAG-KVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWREK--QKLNALGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLIERE 966

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BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
Match: sp|O60264|SMCA5_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens OX=9606 GN=SMARCA5 PE=1 SV=1)

HSP 1 Score: 1272.69 bits (3292), Expect = 0.000e+0
Identity = 636/883 (72.03%), Postives = 759/883 (85.96%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW++EF RWVP+++ +CLIGD+E R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VL+PFLLRRIKADVEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPHDERQ SI+ YN+P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N++GK+E+L MI++GA ++F SK+++I DEDID +L RG +KTAEMN+KL ++GES+LR    D +     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P A   + EEQ KI EAESL + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE
Sbjct:  137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTES----SVYNFEGEDYREK--QKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPR-NPELPNAAQAQKEEQLKIDEAESLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERE 1011

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BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
Match: sp|Q91ZW3|SMCA5_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1)

HSP 1 Score: 1268.06 bits (3280), Expect = 0.000e+0
Identity = 634/883 (71.80%), Postives = 757/883 (85.73%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            S+GD+RH +TEQEE+E+LLTE+ +   +  RFE SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW++EF +WVP+++ +CLIGD+E R+  +R+ +LP +WDV VTSYEM IKEKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+ +FD  F+ N+ L ++ LV+RLH VL+PFLLRRIKADVEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPHDERQ SI+ YN+P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQTKTVRVFR IT+NTVEERI+ RAEMKL+LD+IVIQQGRLV+Q  N++GK+E+L MI++GA ++F SK+++I DEDID +L RG +KTAEMN+KL ++GES+LR    D +     SVYNFEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+     P A   + EEQ KI EAE L + E+ E+E+LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK+NVYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE
Sbjct:  136 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTES----SVYNFEGEDYREK--QKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRSPD-LPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERE 1010

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BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
Match: sp|Q6PGB8|SMCA1_MOUSE (Probable global transcription activator SNF2L1 OS=Mus musculus OX=10090 GN=Smarca1 PE=1 SV=1)

HSP 1 Score: 1266.14 bits (3275), Expect = 0.000e+0
Identity = 629/945 (66.56%), Postives = 776/945 (82.12%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSS-----------SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK 2926
            D+ K  E +L + E F+       +   T+P   K +             S+GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV LDKLL ++KEQGSR+L+FSQMTR+LDILEDYC+WR Y+Y RLDG TPH+ER+ +ID +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F  K++++ DEDI  +L RGE+KTAEMN+++ ++GES+LR  + D ++    S+Y FEGEDYREK   K     WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   + + EEQ KI  AE LT  E  E+++LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K
Sbjct:   94 DRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARPRVKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESELTDEDIVTILERGEKKTAEMNERMQKMGESSLRNFRMDLEQ----SLYKFEGEDYREK--QKLGTVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPEIPNPAIAQREEQKKIDGAEPLTPQETEEKDKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEK 1030

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BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
Match: sp|P28370|SMCA1_HUMAN (Probable global transcription activator SNF2L1 OS=Homo sapiens OX=9606 GN=SMARCA1 PE=1 SV=2)

HSP 1 Score: 1248.8 bits (3230), Expect = 0.000e+0
Identity = 640/968 (66.12%), Postives = 786/968 (81.20%), Query Frame = 2

Query:  116 MEP-VKEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKF-----------SSSSIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI-NSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQI------------SIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSK 2926
            M+P  +E ++ D+ K  E +L + E F+       +   T+P   K            S  S GD+RH +TEQEE+E+LL+E+++   +  RFE SP +V GG +RDYQIRGLNWLI LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ IC +GD++ R+  IR++++P +WDV VTSYEM IKEKS  KKF++ YL IDEAHRIKNEKSKLSEIVR FKS NRLL+TGTPLQNNLHELWALLNFL+P++F S+ +FD  F+  N L ++ LV+RLH+VLKPFLLRRIK DVEK LPPKKEIKIY+GLS +QRE YTKILMKDID++N +G K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV+LDKLL KLKEQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ER+             +I+ +N P S KF+FMLSTRAGGLGINLA+ADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLIT+NTVEERI+ RAE+KL+LD+IVIQQGRL++Q++N+L K E+L MI++GA ++F SK++++ DEDI  +L RGE+KTAEMN++L ++GES+LR  + D ++S    +Y FEGEDYREK   K  M  WI+PPKRERKANYAVD YF++ALR++EPK PKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   L + EEQ KI  AE LT  E  E+E+LL QGFT WTKRDF QFIKANEKYGRDDI++I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ARY+APFHQLRIQYGT+KGKNYTEEEDRFLICMLHK+GFD++NVY+ LR  VR APQFRFDWFI+SRTA+E QRRC+TLI+LIE+E  ++EE+ R  K
Sbjct:   79 MDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQS----LYKFEGEDYREK--QKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR-NPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEK 1038

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BLAST of SWI:SNF matrix associated vs. TrEMBL
Match: A0A5J4P1W5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Paragonimus westermani OX=34504 GN=DEA37_0000106 PE=4 SV=1)

HSP 1 Score: 1438.71 bits (3723), Expect = 0.000e+0
Identity = 707/940 (75.21%), Postives = 825/940 (87.77%), Query Frame = 2

Query:  161 IECILSKAEQFSKLKDGGTTPSKNKFSSSSI--------------GDHRHSXXXXXXXXXXXXXXXXX-VIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDN-DESG-VYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKG 2929
            ++ +++KAE FSK+K  G+  +K   S   I              GDHRH +TE EE+E+LL++TK   + V RFE SP+FV GGEMRDYQ+RGLNW+IQL+  + NGILADEMGLGKTLQTI+M+GY+KH R+ PGP+LII PKSTL NW+NE  RWVP+++ I L+G  E RS+ IR+ IL ++WDV+VTSYEMCIKEK+ L+KF+YIY+ IDEAHRIKNEKSKLSEIVR F+SQNRLLITGTPLQNNLHELW+LLNFLMPE+FASS  FDDLF ++S +E+ LVQRLH+VLKPFLLRRIKADVEK+LPPKKE KIYIGLS +QRELYTKILMKDID+VN  G K D+VRLLNILMQLRKC NHPYLFDG+EPGPPYTTD HLV+NCGKM+LLDKLL +LKEQGSR+L+FSQMTRMLDILEDYCLWR +DY RLDGST H++RQ+ IDE+N+PGS KF+FMLSTRAGGLGINLATADVVI++DSDWNPQVDLQA DRAHRIGQTKTVRVFRLITENTVEERII RAEMKL+LDN+VIQQGRLVEQK+NQL K ++L+MIKYGANYIFRSKD+D++DEDID++LARGEQ+TAEMN+KL  LGESNLR LKFD  +ESG  +S Y FEGEDYREK      ++GWI+PPKRERKANYAVD YF++ALR++EPKAPK PRPPKQP+VQDFQFFPPRLFELLDKEIYAFRKSIGY VP+   A P+AE ER+EEQ +I EAE L E E+ E+E LL QGFT W+KRDF QFIKANEK+GRDD+E+IS DVEGKTPEEVK+Y+RVFW+RCNELQDV+K+++QIERGEAKIQRR A+KRALDLKMARYRAPFHQLRIQYGTNKGKNY EEEDRFLICMLHKLGFD+DNVYD+LRLAVRLAPQFRFDWF+RSRTA+ELQRRCSTLITLIERE+CD++++S++ +G
Sbjct:   15 LDSLIAKAEVFSKIKSSGSADAKTLTSPLKITPELLIHSPTSDLAGDHRHRRTEHEEDEELLSDTKHGGMAVQRFETSPFFVKGGEMRDYQVRGLNWMIQLHHDNINGILADEMGLGKTLQTIAMLGYMKHCRHKPGPNLIIVPKSTLSNWMNELNRWVPTLRAISLMGSIEERSQTIRDDILTKEWDVLVTSYEMCIKEKAVLRKFHYIYVIIDEAHRIKNEKSKLSEIVRQFRSQNRLLITGTPLQNNLHELWSLLNFLMPELFASSDLFDDLFKLSSDQEQNLVQRLHAVLKPFLLRRIKADVEKKLPPKKECKIYIGLSKMQRELYTKILMKDIDIVNSTGNKVDRVRLLNILMQLRKCCNHPYLFDGLEPGPPYTTDQHLVDNCGKMMLLDKLLTRLKEQGSRVLIFSQMTRMLDILEDYCLWRAHDYFRLDGSTRHEDRQVYIDEFNRPGSTKFIFMLSTRAGGLGINLATADVVIIFDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITENTVEERIIMRAEMKLRLDNLVIQQGRLVEQKSNQLQKGDVLEMIKYGANYIFRSKDSDLKDEDIDIILARGEQRTAEMNEKLATLGESNLRALKFDTPEESGAAFSAYYFEGEDYREKHQKGSGLEGWIEPPKRERKANYAVDAYFREALRVSEPKAPKPPRPPKQPNVQDFQFFPPRLFELLDKEIYAFRKSIGYKVPRNPDAGPDAERERLEEQMRIDEAEPLNEDELMEKELLLSQGFTNWSKRDFHQFIKANEKHGRDDLEAISLDVEGKTPEEVKRYARVFWTRCNELQDVDKHMAQIERGEAKIQRRAAVKRALDLKMARYRAPFHQLRIQYGTNKGKNYVEEEDRFLICMLHKLGFDRDNVYDDLRLAVRLAPQFRFDWFLRSRTAMELQRRCSTLITLIEREMCDIDDRSKQPRG 954

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BLAST of SWI:SNF matrix associated vs. TrEMBL
Match: A0A4Z2DMP6 (Putative global transcription activator SNF2L1 isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_011064 PE=4 SV=1)

HSP 1 Score: 1429.08 bits (3698), Expect = 0.000e+0
Identity = 731/984 (74.29%), Postives = 849/984 (86.28%), Query Frame = 2

Query:  161 IECILSKAEQFSKLKDGG------TTPSKNKF-------SSSSIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDN-DESGV-YSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEE--KSRKSKGGNHAPESSGGQLVSKNSGSHTSKHKAG----EDELSVPNKKKK 3046
            ++ ++ KAE ++++K  G      T+P + K        +S   GDHRH +TE+EE+E+LLTETK  V  + RFE SP++V GGEMRDYQIRGLNW+IQL+ ++ NGILADEMGLGKTLQTI+++GY+KHYR+  GPH++I PKSTL NW+NEF RWVPS++ + LIG+QE RS+ I+E+IL ++WDVIVTSYEMCIKEK+ LKKF++IYL IDEAHRIKNEKSKLSEIVR F+SQNRLLITGTPLQNNLHELWALLNFLMP++F+SS  FDD+F  N+  E++LVQRLH+VL+PFLLRRIKADVEKRLPPKKE KIYIGLS +QRELYTKILMKDIDLVN  G K D+VRLLNILMQLRKC NHPYLFDG+EPGPPYTTDYHLV+NCGK++LLDKLL KLKEQGSR+LLFSQMTRM+DILEDYCLWR Y+Y RLDGST H+ERQ+SIDE+N+PGS KFLFMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFRLITE+TVEERII RAEMKLKLDN+VIQQGRLVEQK+NQL K+++LDMI++GANYIFRSKD+D +DEDID++LARGEQ+TAEMN+KL +LGESNLR LKFD  DE+G   SVY +EGEDYREK      +DGWI+PPKRERKANYAVD YF++ALR++EPKAPK PRPPKQP+VQDFQFFPPRLFELLDKEIYAFRKSIGY VP+   A P+ E ER++EQ +I E+E LTE E+AE+EELL QGFT W+KRDFQQFIKANEK+GRDD+E+IS DVEGKTPEEVK+Y+RVFW+RCNELQDV+K+++QIERGEAKIQRR A+KRALDLKMARYRAPFHQLRIQYGTNKGKNY EEEDRFLICMLHKLGFD+DNVYD+LRLAVRLAPQFRFDWF+RSRTA+ELQRRCSTLITLIEREICDLE+  K R   G N+ P +      S  S     K K        E+S   KKKK
Sbjct:   23 LDLLVEKAELYTQVKLIGSGTKDLTSPPRIKSEQPISSPTSYVFGDHRHRRTEKEEDEELLTETKHGVSAIQRFEASPWYVKGGEMRDYQIRGLNWMIQLHHNNINGILADEMGLGKTLQTIALLGYIKHYRHKNGPHIVIVPKSTLSNWMNEFVRWVPSLRAVSLIGNQEERSQKIQEEILKKEWDVIVTSYEMCIKEKAVLKKFHFIYLIIDEAHRIKNEKSKLSEIVRDFRSQNRLLITGTPLQNNLHELWALLNFLMPDLFSSSEMFDDMFKTNNDHEDSLVQRLHAVLRPFLLRRIKADVEKRLPPKKECKIYIGLSKMQRELYTKILMKDIDLVNSVGNKVDRVRLLNILMQLRKCCNHPYLFDGMEPGPPYTTDYHLVDNCGKLMLLDKLLPKLKEQGSRVLLFSQMTRMMDILEDYCLWRGYEYFRLDGSTRHEERQVSIDEFNRPGSTKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITEHTVEERIIMRAEMKLKLDNLVIQQGRLVEQKSNQLQKDDVLDMIRHGANYIFRSKDSDFKDEDIDIILARGEQRTAEMNEKLAQLGESNLRSLKFDTADENGAPTSVYIYEGEDYREKQSRTSLLDGWIEPPKRERKANYAVDAYFREALRVSEPKAPKPPRPPKQPNVQDFQFFPPRLFELLDKEIYAFRKSIGYKVPRNPDAGPDGERERLDEQARIDESEPLTEDEIAEKEELLTQGFTNWSKRDFQQFIKANEKHGRDDLEAISVDVEGKTPEEVKRYARVFWTRCNELQDVDKHMAQIERGEAKIQRRAAVKRALDLKMARYRAPFHQLRIQYGTNKGKNYVEEEDRFLICMLHKLGFDRDNVYDDLRLAVRLAPQFRFDWFLRSRTAMELQRRCSTLITLIEREICDLEDRTKQRSGAGTNNLPATPVNSGPSNASTVSNQKRKPTPSDPTSEISGNPKKKK 1006

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BLAST of SWI:SNF matrix associated vs. TrEMBL
Match: A0A4E0RLR9 (SWI:SNF matrix associated OS=Fasciola hepatica OX=6192 GN=D915_000815 PE=4 SV=1)

HSP 1 Score: 1424.07 bits (3685), Expect = 0.000e+0
Identity = 693/924 (75.00%), Postives = 801/924 (86.69%), Query Frame = 2

Query:  329 VNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDE--SGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNS-----------GSHTSKHKAGEDELSV-PNKKKK 3046
            V RFE SP+FV GGEMRDYQ+RGLNW+IQL+  + NGILADEMGLGKTLQTISM+GY+KH R   GP LII PKSTL NW+NE  RWVP+++P+ LIG QE R++VIR++I+ ++WDV+VTSYE+CI+EK+ L+KF+YIYL IDEAHRIKNEKSKLS+IVR F+SQNRLLITGTPLQNNLHELWALLNFLMP++FASS  FDD+F  NS +E+ L+QRLH+VLKPFLLRRIKADVEKRLPPKKEIKIYIGLS +QR+LYTKILMKDIDLVN        ++D+VRLLNILMQLRKC NHPYLFDG+EPGPPYTTD HL+ENCGKMVLLDKLL +LKEQGSR+L+FSQMTR+LDILEDYCLWR +DY RLDGST H++RQ+ IDEYN+PGS KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFRLITENTVEERII RAEMKL+LDN+VIQQGRLVEQK NQL K E+LDMIK+GANYIFR+KD+D +DEDID++LARGEQ+TAEMN+KL +LGESNLR LKFD  E      S Y FEGEDYREK      ++GWI+PPKRERKANYAVD YF++ALR++EPKAPK PRPPKQP+VQDFQFFPPRLFELLDKEIYAFRKSIGY VP+   A P+AE ER+E+Q +I EAE LTE E+ E+E+LL QGFT W+KRDFQQFIKANEK+GRDD+E+IS DVEGKTPEEVK+Y+RVFW+RCNELQDV+K+++QIERGEAKIQRR AIKRALDLKMARYRAPFHQLRIQYG NKGKNY EEEDRFLICMLHKLGFD+DNVYD+LRLAVRLAPQFRFDWF+RSRTA+ELQRRCSTLITLIEREICD+++++++ +GG     +  G   + N             +   K KA E   +V PN KK+
Sbjct:   88 VQRFESSPFFVKGGEMRDYQVRGLNWMIQLHQDNINGILADEMGLGKTLQTISMLGYMKHCRQKSGPSLIIVPKSTLSNWMNEIKRWVPTLRPVALIGMQEERNQVIRDEIVGKEWDVLVTSYEICIREKAVLRKFHYIYLIIDEAHRIKNEKSKLSDIVRQFRSQNRLLITGTPLQNNLHELWALLNFLMPDLFASSELFDDMFKTNSEQEQNLIQRLHAVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSKMQRDLYTKILMKDIDLVNSMINVNANRADRVRLLNILMQLRKCCNHPYLFDGLEPGPPYTTDMHLIENCGKMVLLDKLLARLKEQGSRVLIFSQMTRLLDILEDYCLWRGHDYFRLDGSTRHEDRQVYIDEYNRPGSTKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITENTVEERIIMRAEMKLRLDNLVIQQGRLVEQKANQLQKGEVLDMIKFGANYIFRTKDSDFKDEDIDIILARGEQRTAEMNEKLAKLGESNLRSLKFDTPEELGPATSAYYFEGEDYREKHRGTA-LEGWIEPPKRERKANYAVDAYFREALRVSEPKAPKPPRPPKQPNVQDFQFFPPRLFELLDKEIYAFRKSIGYKVPRNPDAGPDAERERLEQQLRIDEAEPLTEEEVVEKEDLLSQGFTNWSKRDFQQFIKANEKHGRDDLEAISMDVEGKTPEEVKRYARVFWTRCNELQDVDKHMAQIERGEAKIQRRAAIKRALDLKMARYRAPFHQLRIQYGANKGKNYVEEEDRFLICMLHKLGFDRDNVYDDLRLAVRLAPQFRFDWFLRSRTAMELQRRCSTLITLIEREICDMDDRTKQQRGGGPGTNNQTGGPATTNDGSGTNSGSGGTAASAQKRKATEGGGAVEPNGKKR 1010

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BLAST of SWI:SNF matrix associated vs. TrEMBL
Match: A0A504YVC4 (SWI:SNF matrix associated OS=Fasciola gigantica OX=46835 GN=FGIG_02731 PE=4 SV=1)

HSP 1 Score: 1422.14 bits (3680), Expect = 0.000e+0
Identity = 692/924 (74.89%), Postives = 801/924 (86.69%), Query Frame = 2

Query:  329 VNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDE--SGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNS-----------GSHTSKHKAGEDELSV-PNKKKK 3046
            V RFE SP+FV GGEMRDYQ+RGLNW+IQL+  + NGILADEMGLGKTLQTISM+GY+KH R   GP LII PKSTL NW+NE  RWVP+++P+ LIG QE R++VIR++I+ ++WDV+VTSYE+CI+EK+ L+KF+YIYL IDEAHRIKNEKSKLS+IVR F+SQNRLLITGTPLQNNLHELWALLNFLMP++FASS  FDD+F  NS +E+ L+QRLH+VLKPFLLRRIKADVEKRLPPKKEIKIYIGLS +QR+LYTKILMKDIDLVN        ++D+VRLLNILMQLRKC NHPYLFDG+EPGPPYTTD HL+ENCGKMVLLDKLL +LKEQGSR+L+FSQMTR+LDILEDYCLWR +DY RLDGST H++RQ+ IDEYN+PGS KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQTKTVRVFRLITENTVEERII RAEMKL+LDN+VIQQGRLVEQK NQL K E+LDMIK+GANYIFR+KD+D +DEDID++LARGEQ+TAEMN+KL +LGES+LR LKFD  E      S Y FEGEDYREK      ++GWI+PPKRERKANYAVD YF++ALR++EPKAPK PRPPKQP+VQDFQFFPPRLFELLDKEIYAFRKSIGY VP+   A P+AE ER+E+Q +I EAE LTE E+ E+E+LL QGFT W+KRDFQQFIKANEK+GRDD+E+IS DVEGKTPEEVK+Y+RVFW+RCNELQDV+K+++QIERGEAKIQRR AIKRALDLKMARYRAPFHQLRIQYG NKGKNY EEEDRFLICMLHKLGFD+DNVYD+LRLAVRLAPQFRFDWF+RSRTA+ELQRRCSTLITLIEREICD+++++++ +GG     +  G   + N             +   K KA E   +V PN KK+
Sbjct:   88 VQRFESSPFFVKGGEMRDYQVRGLNWMIQLHQDNINGILADEMGLGKTLQTISMLGYMKHCRQKSGPSLIIVPKSTLSNWMNEIKRWVPTLRPVALIGMQEERNQVIRDEIVGKEWDVLVTSYEICIREKAVLRKFHYIYLIIDEAHRIKNEKSKLSDIVRQFRSQNRLLITGTPLQNNLHELWALLNFLMPDLFASSELFDDMFKTNSEQEQNLIQRLHAVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSKMQRDLYTKILMKDIDLVNSMINVNANRADRVRLLNILMQLRKCCNHPYLFDGLEPGPPYTTDMHLIENCGKMVLLDKLLARLKEQGSRVLIFSQMTRLLDILEDYCLWRGHDYFRLDGSTRHEDRQVYIDEYNRPGSTKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITENTVEERIIMRAEMKLRLDNLVIQQGRLVEQKANQLQKGEVLDMIKFGANYIFRTKDSDFKDEDIDIILARGEQRTAEMNEKLAKLGESSLRSLKFDTPEELGPATSAYYFEGEDYREKHRGTA-LEGWIEPPKRERKANYAVDAYFREALRVSEPKAPKPPRPPKQPNVQDFQFFPPRLFELLDKEIYAFRKSIGYKVPRNPDAGPDAERERLEQQLRIDEAEPLTEEEVVEKEDLLSQGFTNWSKRDFQQFIKANEKHGRDDLEAISMDVEGKTPEEVKRYARVFWTRCNELQDVDKHMAQIERGEAKIQRRAAIKRALDLKMARYRAPFHQLRIQYGANKGKNYVEEEDRFLICMLHKLGFDRDNVYDDLRLAVRLAPQFRFDWFLRSRTAMELQRRCSTLITLIEREICDMDDRTKQQRGGGPGTNNQTGGPATANDGSGTNSGSGGTAASAQKRKATEGGGAVEPNGKKR 1010

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BLAST of SWI:SNF matrix associated vs. TrEMBL
Match: A0A5K3ETF1 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 1421.76 bits (3679), Expect = 0.000e+0
Identity = 703/977 (71.95%), Postives = 832/977 (85.16%), Query Frame = 2

Query:  149 KKKTIECILSKAEQFSKLKDGG-------TTPSKNKFSSSSIGDHRH--SXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKS--RKSKGGNHAPESSGGQLVSKNSGSHTSKHKAGEDELSVPNKKKK 3046
            KK+ ++ +L KA  F+ LK+ G       ++P+  + +  S  DHRH  ++ E++EE    T+   +  + RF+ +P++V GGEMRDYQIRGLNWLI L LS+TNGILADEMGLGKTLQTIS++GY+KHYR   GP L+I PKSTL NW+NE  +WVPS+ P+CLIG+ + R+RVIRE+ILP +WDV++TSYEMCIKEK+ L+++N++YL IDEAHRIKNEKSKLSE+VR F SQNRLLITGTPLQNNLHELWALLNFLMP+MFASS  FD+LFN  SL+EE+LV RLHS+L+PFLLRR+KADVEKRLPPKKEIKIYIGLS +QRELYTKILMKD+DLVN  G K+DKVRLLN+LMQLRKC NHPYLFDG+EPGPPYTTD HLV+NCGKMVLLDKLL KL+EQGSR+L+FSQMTR LDILEDYC+WR ++Y RLDG T HD+RQ+SIDE+N+PGS KF+FMLSTRAGGLGINLATADVV+LYDSDWNPQVDLQA DRAHRIGQTKTVRVFRLITENTVEERI+ RA+MKL LDN+VIQQGRLV+QK+NQL K E+LDMIK+GANYIFRSK++ I+DEDID +LARGEQKT+E+N+K  ++GESNLR L+FD +E    SVY F+GEDYR K  +   + GWI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP++QDFQFFPPRLFELLDKEIYAFRKSIGY VP+   A P+ E ER EEQ KI +A  L +AE+AE+EELL QGFT W+KRDFQQFIKANEK+GRDD+ESIS DVEGKTP+EVK+Y+RVFW+RC+ELQDV+K+++QIERGEAKIQRR A+KRALD+KMARYRAPFHQLRIQYG NKGKNYTEEEDRFLICMLHKLGFD+DNVYD+LRLA+RLAPQFRFDWFIRSRTA+ELQRRCSTLITLIERE+ D+E+KS  R    G     + GG   +  S     K K+     SVP + KK
Sbjct:   30 KKRRMQELLEKAAAFTALKETGGETSVALSSPTNQQTAPLSATDHRHRRTEKEEDEELLSETKRGSNATITRFDVTPWYVKGGEMRDYQIRGLNWLIGLGLSNTNGILADEMGLGKTLQTISLLGYVKHYRGKSGPFLVIVPKSTLSNWMNEVRKWVPSLHPVCLIGNADDRARVIREEILPGNWDVLITSYEMCIKEKALLRRYNFVYLIIDEAHRIKNEKSKLSEVVRMFNSQNRLLITGTPLQNNLHELWALLNFLMPQMFASSDTFDELFNSQSLQEESLVTRLHSILRPFLLRRVKADVEKRLPPKKEIKIYIGLSKMQRELYTKILMKDLDLVNSTGQKADKVRLLNVLMQLRKCCNHPYLFDGVEPGPPYTTDQHLVDNCGKMVLLDKLLKKLREQGSRVLIFSQMTRTLDILEDYCMWRGHEYFRLDGQTAHDDRQVSIDEFNRPGSSKFIFMLSTRAGGLGINLATADVVVLYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITENTVEERIVMRADMKLYLDNLVIQQGRLVDQKSNQLQKTEVLDMIKFGANYIFRSKESAIKDEDIDEILARGEQKTSELNEKYAKMGESNLRLLRFDTEEETPDSVYIFDGEDYRTKQQNSGALAGWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNIQDFQFFPPRLFELLDKEIYAFRKSIGYKVPRNPDAGPDGERERQEEQAKINDATPLDDAELAEKEELLTQGFTNWSKRDFQQFIKANEKHGRDDLESISLDVEGKTPDEVKRYARVFWARCSELQDVDKHMAQIERGEAKIQRRAAVKRALDIKMARYRAPFHQLRIQYGANKGKNYTEEEDRFLICMLHKLGFDRDNVYDDLRLAIRLAPQFRFDWFIRSRTAMELQRRCSTLITLIEREVVDMEDKSKQRGPTSGTATAGAVGGPGGALASSGVGQKRKSSSAITSVPVESKK 1006

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BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
Match: smarca1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Source:NCBI gene;Acc:103034185])

HSP 1 Score: 1259.2 bits (3257), Expect = 0.000e+0
Identity = 624/884 (70.59%), Postives = 765/884 (86.54%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGV-YSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            S+GD+RH +TEQEE+E+LL+E+++   ++ RFE+SP +V  G +RDYQIRGLNW+I LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVP++K +CLIGD++ R+  IR+ ++P +WDV VTSYEM I+EKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+++FD  F+ N+ L ++ LV+RLH+VL+PFLLRRIK +VEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKM+ LDKLL K++EQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG+TPH++R+ +ID +N P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLITENTVEERI+ RAEMKL+LD+IVIQQGRL+EQ+ N+LGK+E+L MI++GA ++F SKD+++ +EDI  +L RG +KTAEMN+++++LGES+LR   F  D SG   S+Y FEGEDYREK   K  M  WI+PPKRERKANYAVD YF++ALR++EP+APKAPRPPKQP++QDFQFFPPRLFELL+ EI  +RK+IGY VPK       A++++ EEQ KI EAE LT  E  E+E+LL QGFT+W KRDF QFIKANEKYGRDDI+SI+ +VEGKTPEEV +YS VFW RCNELQD+E+ ++QIERGEA+IQRR++IK+ALD+K+ARY+APFHQLRIQYGTNKGKNYTEEEDRFLICMLHK+GFDK+NVY+ LR  VR APQFRFDWFI+SRTA+ELQRRC+TLI+LIE+E
Sbjct:   16 SVGDNRHRRTEQEEDEELLSESRKAANLLVRFEESPSYVKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNNCLGDQKLVERLHAVLRPFLLRRIKQEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVTNSGKMLALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRLDGNTPHEDREKAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITENTVEERIVERAEMKLRLDSIVIQQGRLIEQQ-NKLGKDEMLQMIRHGATHVFASKDSELTEEDISTILERGAKKTAEMNERMEKLGESSLRN--FTMDTSGAETSLYKFEGEDYREK--QKLSMMEWIEPPKRERKANYAVDAYFREALRVSEPRAPKAPRPPKQPNIQDFQFFPPRLFELLEMEILYYRKTIGYKVPKSPDIPNAAQVQK-EEQRKIDEAEPLTAEETEEKEKLLTQGFTSWNKRDFNQFIKANEKYGRDDIDSIAREVEGKTPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISIKKALDVKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFRFDWFIKSRTAMELQRRCNTLISLIEKE 892

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
Match: smarca1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Source:NCBI gene;Acc:103034185])

HSP 1 Score: 1254.2 bits (3244), Expect = 0.000e+0
Identity = 624/884 (70.59%), Postives = 765/884 (86.54%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGV-YSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            S+GD+RH +TEQEE+E+LL+E+++   ++ RFE+SP +V  G +RDYQIRGLNW+I LY +  NGILADEMGLGKTLQTI+++GYLKHYRN+PGPH+++ PKSTL NW+NEF RWVP++K +CLIGD++ R+  IR+ ++P +WDV VTSYEM I+EKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+++FD  F+ N+ L ++ LV+RLH+VL+PFLLRRIK +VEK LPPKKE+KIY+GLS +QRE YT+ILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKM+ LDKLL K++EQGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG+TPH++R+ +ID +N P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFRLITENTVEERI+ RAEMKL+LD+IVIQQGRL+EQ+ N+LGK+E+L MI++GA ++F SKD+++ +EDI  +L RG +KTAEMN+++++LGES+LR   F  D SG   S+Y FEGEDYREK   K  M  WI+PPKRERKANYAVD YF++ALR++EP+APKAPRPPKQP++QDFQFFPPRLFELL+ EI  +RK+IGY VPK       A++++ EEQ KI EAE LT  E  E+E+LL QGFT+W KRDF QFIKANEKYGRDDI+SI+ +VEGKTPEEV +YS VFW RCNELQD+E+ ++QIERGEA+IQRR++IK+ALD+K+ARY+APFHQLRIQYGTNKGKNYTEEEDRFLICMLHK+GFDK+NVY+ LR  VR APQFRFDWFI+SRTA+ELQRRC+TLI+LIE+E
Sbjct:   16 SVGDNRHRRTEQEEDEELLSESRKAANLLVRFEESPSYVKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNNCLGDQKLVERLHAVLRPFLLRRIKQEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVTNSGKMLALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRLDGNTPHEDREKAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITENTVEERIVERAEMKLRLDSIVIQQGRLIEQQ-NKLGKDEMLQMIRHGATHVFASKDSELTEEDISTILERGAKKTAEMNERMEKLGESSLRN--FTMDTSGAETSLYKFEGEDYREK--QKLSMMEWIEPPKRERKANYAVDAYFREALRVSEPRAPKAPRPPKQPNIQDFQFFPPRLFELLEMEILYYRKTIGYKVPKSPDIPNAAQVQK-EEQRKIDEAEPLTAEETEEKEKLLTQGFTSWNKRDFNQFIKANEKYGRDDIDSIAREVEGKTPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISIKKALDVKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFRFDWFIKSRTAMELQRRCNTLISLIEKE 892

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
Match: smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:NCBI gene;Acc:103021645])

HSP 1 Score: 1240.71 bits (3209), Expect = 0.000e+0
Identity = 639/943 (67.76%), Postives = 769/943 (81.55%), Query Frame = 2

Query:  128 KEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSSSI-----------GDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDL 2902
            +E V+ D+    E +L + E F+       +   T+P K K     I           GD+RH +TEQEE+E+LL+E  +   +  RF+ SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ +CLIGD++ R+  IR+ +LP +WDV VTSYEM I E++  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F SS +FD  F+ N+ L +  LV+RLH+VL+PFLLRRIKADVEK L PKKEIK+YIGLS +QRE YTKILMKDID++N AG K DK+RLLN+LMQLRKC NHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL EQGSR+L+FSQMTR+LDILEDYC+WR Y YCRLDG TPH+ERQISI+ +N+P S KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQ K VRVFR ITENTVEERI+ RAEMKL+LD+IVIQQGRLV+   N+LGK+E+L +I++GA ++F SK+++I DEDID +L RGE+KT EM +KL  LGES+LR    D +     SVYNFEGEDYREK   K  +  WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+       A++++ EEQ KI EAE L E E+ E+E LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK++VYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE  +L
Sbjct:   65 EEKVKTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDNRHRRTEQEEDEELLSENSKASNVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRDERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNSAG-KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKLNEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAEMKLRLDSIVIQQGRLVDPNMNKLGKDEMLSIIRHGATHVFASKESEITDEDIDAILERGEKKTMEMKEKLSNLGESSLRNFTMDTEN----SVYNFEGEDYREK---KKVITNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPELPNSAQVQK-EEQAKIDEAEPLNEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMEL 998

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
Match: smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:NCBI gene;Acc:103021645])

HSP 1 Score: 1238.79 bits (3204), Expect = 0.000e+0
Identity = 639/943 (67.76%), Postives = 769/943 (81.55%), Query Frame = 2

Query:  128 KEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSSSI-----------GDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDL 2902
            +E V+ D+    E +L + E F+       +   T+P K K     I           GD+RH +TEQEE+E+LL+E  +   +  RF+ SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ +CLIGD++ R+  IR+ +LP +WDV VTSYEM I E++  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F SS +FD  F+ N+ L +  LV+RLH+VL+PFLLRRIKADVEK L PKKEIK+YIGLS +QRE YTKILMKDID++N AG K DK+RLLN+LMQLRKC NHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL EQGSR+L+FSQMTR+LDILEDYC+WR Y YCRLDG TPH+ERQISI+ +N+P S KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQ K VRVFR ITENTVEERI+ RAEMKL+LD+IVIQQGRLV+   N+LGK+E+L +I++GA ++F SK+++I DEDID +L RGE+KT EM +KL  LGES+LR    D +     SVYNFEGEDYREK   K  +  WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+       A++++ EEQ KI EAE L E E+ E+E LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK++VYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE  +L
Sbjct:   65 EEKVKTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDNRHRRTEQEEDEELLSENSKASNVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRDERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNSAG-KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKLNEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAEMKLRLDSIVIQQGRLVDPNMNKLGKDEMLSIIRHGATHVFASKESEITDEDIDAILERGEKKTMEMKEKLSNLGESSLRNFTMDTEN----SVYNFEGEDYREK---KKVITNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPELPNSAQVQK-EEQAKIDEAEPLNEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMEL 998

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
Match: smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:NCBI gene;Acc:103021645])

HSP 1 Score: 1237.25 bits (3200), Expect = 0.000e+0
Identity = 614/860 (71.40%), Postives = 730/860 (84.88%), Query Frame = 2

Query:  326 IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDL 2902
            +  RF+ SP +V  G++RDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ +CLIGD++ R+  IR+ +LP +WDV VTSYEM I E++  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F SS +FD  F+ N+ L +  LV+RLH+VL+PFLLRRIKADVEK L PKKEIK+YIGLS +QRE YTKILMKDID++N AG K DK+RLLN+LMQLRKC NHPYLFDG EPGPPYTTD HLV N GKM +LDKLL KL EQGSR+L+FSQMTR+LDILEDYC+WR Y YCRLDG TPH+ERQISI+ +N+P S KF+FMLSTRAGGLGINLATADVVI+YDSDWNPQVDLQA DRAHRIGQ K VRVFR ITENTVEERI+ RAEMKL+LD+IVIQQGRLV+   N+LGK+E+L +I++GA ++F SK+++I DEDID +L RGE+KT EM +KL  LGES+LR    D +     SVYNFEGEDYREK   K  +  WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+       A++++ EEQ KI EAE L E E+ E+E LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGKTPEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK++VYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE  +L
Sbjct:  132 VCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRDERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNSAG-KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKLNEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAEMKLRLDSIVIQQGRLVDPNMNKLGKDEMLSIIRHGATHVFASKESEITDEDIDAILERGEKKTMEMKEKLSNLGESSLRNFTMDTEN----SVYNFEGEDYREK---KKVITNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPELPNSAQVQK-EEQAKIDEAEPLNEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMEL 982

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
Match: SMARCA5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101])

HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0
Identity = 408/595 (68.57%), Postives = 490/595 (82.35%), Query Frame = 2

Query:  197 KLKDG-GTTPSKNKFSSSSIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ--GRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDES 1966
            KLK G     +  K S  S+GD+RH +TEQEE+E+LL+E+++    + RFE+SP +V  G MRDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KHYRN+PGPH+++ PKSTL NW+ EF RWVPS++ +CLIGD++ R    +  + P +WDV VTSYEM I+EKS  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELW+LLNFL+P++F S+  F   F+ N+   ++ LV+RLH VL+PFLLRRIKADVEK LPPKKE KIYIGLS +QRE YTKILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD H+V N GKMV+LDKLL KL EQGSR+L+FSQMTRM+DILEDYC+WR Y+YCRLDG TPH++RQ+SI  +N P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFR ITE+TVE+RI+ RAEMKL+LD+IVIQQ  GRLV+Q  N+LGK+E+L MI+YGA  +F SK++ I DEDIDV+L RG +KTAEMN+K+ +LGE+ LR    D + S
Sbjct:   51 KLKPGRPRVKTDEKQSLLSVGDYRHRRTEQEEDEELLSESRKSANALLRFEESPSYVKCGTMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMAEFERWVPSLRAVCLIGDKDHRVSASQPIVPPIEWDVCVTSYEMIIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADTFTSWFDTNNCFGDQQLVERLHMVLRPFLLRRIKADVEKSLPPKKECKIYIGLSKMQREWYTKILMKDIDILNSAG-KMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHIVINSGKMVVLDKLLPKLHEQGSRVLIFSQMTRMMDILEDYCMWRGYEYCRLDGQTPHEDRQVSIASFNAPDSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKVVRVFRFITESTVEDRIVERAEMKLRLDSIVIQQGPGRLVDQVANKLGKDEMLQMIRYGATQVFSSKESQITDEDIDVILERGAKKTAEMNEKMSQLGENTLRTFTMDTESS 644

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
Match: SMARCA5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101])

HSP 1 Score: 800.431 bits (2066), Expect = 0.000e+0
Identity = 391/553 (70.71%), Postives = 470/553 (84.99%), Query Frame = 2

Query:  248 SIGDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ---GRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKT 1891
            S+GD RH +TEQEE+E+LL+E+K+   I  RFE+SP +V GG MRDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+KH+RN+ GPH+++ PKSTL NW+NEF RWVPS++ +CLIG+++ R          ++WDV VTSYE+ I+EKS  KKFN+ YL IDEAHRIKNEKSKLS+IVR FKS NRLL+TGTPLQNNLHELW+LLNFL+P++F SS +FD  F+ N+ L ++ LV+RLH VL+PFLLRRIKADVEK L PKKE+KIYIGLS +QRE YTKILMKDID++N AG K DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL KL+EQGSR+LLFSQMTRMLDILEDYC+W+ Y YCRLDG TPH++RQ +I  YN P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQTK VRVFR +TENTVEERI+ RAEMKL+LD+IVIQQ   GRL++Q+ N+LGK+E+L MI++GA ++F S+D++I DE+IDV+L RGE++ 
Sbjct:   94 SVGDFRHRRTEQEEDEELLSESKKATNICTRFEESPTYVKGGTMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHHRNIQGPHMVLVPKSTLHNWMNEFERWVPSLRAVCLIGNKDQRVATDENVYTKREWDVCVTSYEIVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSDIVREFKSTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSEDFDSWFDTNNCLGDQELVERLHMVLRPFLLRRIKADVEKSLQPKKEVKIYIGLSKMQREWYTKILMKDIDILNSAG-KMDKLRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVNNSGKMVVLDKLLPKLQEQGSRVLLFSQMTRMLDILEDYCMWKGYGYCRLDGQTPHEDRQEAIAAYNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKRVRVFRFLTENTVEERIVERAEMKLRLDSIVIQQVCAGRLIDQQANKLGKDEMLQMIRHGATHVFASRDSEITDEEIDVVLERGEKRV 645

HSP 2 Score: 224.557 bits (571), Expect = 9.039e-61
Identity = 99/126 (78.57%), Postives = 118/126 (93.65%), Query Frame = 2

Query: 2513 VFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE 2890
            VFW RCNELQD+E+ ++QIERGEA+IQRRV+IK+ALD K+ARYRAPF+QLRI YGTNKGKNYTEEEDRFL+CM+H+LGF+K++VYD LR  +R APQFRFDWFI+SRTA+ELQRRC+TLITLIERE
Sbjct:  817 VFWERCNELQDIERIMAQIERGEARIQRRVSIKKALDAKIARYRAPFYQLRISYGTNKGKNYTEEEDRFLVCMVHRLGFEKESVYDELRQCIRNAPQFRFDWFIKSRTAMELQRRCNTLITLIERE 942

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004254.1 (pep scaffold:Pmarinus_7.0:GL484668:1435:12215:1 gene:ENSPMAG00000003871.1 transcript:ENSPMAT00000004254.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 414.846 bits (1065), Expect = 4.454e-134
Identity = 228/527 (43.26%), Postives = 333/527 (63.19%), Query Frame = 2

Query:  440 ILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRV-----IREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYH-----LVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ----GRLVEQKNNQ------LGKNEILDMIKYGANYIFRSKDTDIRDE----DIDVLLARGEQKTAEMNKKLDELGESNLRQLK 1948
            ILADEMGLGKT+QTIS + Y+ H   + GP L++ P ST+ +W  EF  W P +  +  +GD  +R+ +     I +Q     ++ +VT+YE+ +K+K+ L   N+ +L +DEAHR+KN+ S L + +  FK+  RLLITGTPLQN+L ELW+LL+F+MP+ F++  +FD +    S   +     LH  L+PFLLRR+K DVE+ LP K E  + + ++  Q+  Y  IL ++   ++  G +      LNI+M+L+KC NH YL   I+       D H     LV + GK++LLDKLL +L+E G R+L+FSQM RMLDIL DY   + + + RLDGS  +++R+ ++D +N  GS+ F F+LSTRAGGLGINLA+AD V+++DSDWNPQ DLQAQ RAHRIGQ K V ++RL+T  TVEE II RA+ K+ LD++VIQ+    G+ V QK +         K E+  ++K+GA  +F+  + + ++     DID +L R E +  + +  L   GE  L Q K
Sbjct:    7 ILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIREYEWIHQQTKKLKFNALVTTYEILLKDKTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDKFSAWEDFDAVHGSGS---DNGYVSLHKELEPFLLRRVKKDVERSLPAKVEQILRVEMTPQQKHYYKWILTRNFKALS-KGTRGSTSGFLNIMMELKKCCNHCYL---IKLPEDENVDKHDALQSLVRSSGKLILLDKLLCRLRETGHRVLIFSQMVRMLDILADYLAMKHFPFQRLDGSIKNEQRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLQKGSAPSSSTPFNKEELASILKFGAEELFKEGEAEEQESQQEMDIDEILRRAETREND-DSLLPTAGEELLSQFK 525

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BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
Match: SMARCA2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:HGNC Symbol;Acc:HGNC:11098])

HSP 1 Score: 433.721 bits (1114), Expect = 5.863e-131
Identity = 237/520 (45.58%), Postives = 328/520 (63.08%), Query Frame = 2

Query:  323 VIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQ----DWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEP------GPPYT--TDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMI 1798
             +  R E     ++ G ++ YQ++GL WL+ LY ++ NGILADEMGLGKT+QTI++I YL  ++ L GP LII P STL NW+ EF +W PSV  I   G     S + R   +PQ     ++V++T+YE  IK+K  L K  + Y+ +DE HR+KN   KL++++ T + +  RLL+TGTPLQN L ELWALLNFL+P +F S + F+  FN         ++  EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  I   +S LQ+ LY  +  K + L +G+     GK     L+N ++QLRK  NHPY+F  IE       G P +      L    GK  LLD++L KL+    R+LLF QMT ++ I+EDY  +R + Y RLDG+T  ++R   +  +N+P S  F+F+LSTRAGGLG+NL  AD VI++DSDWNP  DLQAQDRAHRIGQ   VRV RL T N+VEE+I+A A+ KL +D  VIQ G + +QK++   +   L  +
Sbjct:  719 AVSERVECQSSLLVNGSLKMYQVQGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPFLIIVPLSTLSNWMMEFDKWGPSVVKISYKG-----SPIARRAFMPQLRSGKFNVLLTTYEYIIKDKHVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYIAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFALTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKVLYRHMQAKGVLLTDGSEKDKKGKGGAKTLMNTIVQLRKIANHPYMFQHIEESFAEHLGFPNSIVQGADLFRASGKFELLDRILPKLRVSNHRVLLFCQMTSLMTIMEDYFAFRSFRYLRLDGTTKSEDRSNLLKTFNEPNSPYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSGHERRAFLQAV 1232

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BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008242.1 (pep scaffold:Pmarinus_7.0:GL480216:41002:47501:-1 gene:ENSPMAG00000007461.1 transcript:ENSPMAT00000008242.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 377.867 bits (969), Expect = 1.211e-122
Identity = 205/323 (63.47%), Postives = 257/323 (79.57%), Query Frame = 2

Query: 1994 GEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQ 2962
            GEDY  KA  K +M  WI+PPKRERKANYAVD YF++ALR+ EPKAPKAPRPPKQPS+QDFQFFPPRLFELL+KEI  +RK+IGY VP+ +   P   + + EEQ KI  AESL E E+ E+E+LL QGFT W+KRDF QFIKANEK+GRDDI++I+ +VEGKTPE+V +YS +FW RCNELQD+E+ ++QIERGEA+IQRR+ IK+ALD K+ARY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHK+GFD+++VYD LR  +R APQF+FDWF++SRTA  + R  S ++ ++   +      + K++     P+SS  Q
Sbjct:    1 GEDY--KAKQKLNMTEWIEPPKRERKANYAVDAYFREALRVTEPKAPKAPRPPKQPSIQDFQFFPPRLFELLEKEILHYRKTIGYKVPR-NPDVPNPAVTQKEEQGKIDTAESLNEEELEEKEKLLTQGFTDWSKRDFNQFIKANEKWGRDDIDNIAQEVEGKTPEDVIEYSALFWDRCNELQDIERIMAQIERGEARIQRRIGIKKALDAKIARYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKMGFDRESVYDELRQCIRNAPQFKFDWFLKSRTA--MVRLPSFVVVMVTSHLPSPTSVAMKAERKRRGPKSSSAQ 318

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BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
Match: ISW2 (ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; the Isw2 complex exhibits basal levels of chromatin binding throughout the genome as well as target-specific chromatin interactions; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide [Source:SGD;Acc:S000005831])

HSP 1 Score: 860.522 bits (2222), Expect = 0.000e+0
Identity = 458/917 (49.95%), Postives = 614/917 (66.96%), Query Frame = 2

Query:  344 QSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEE--ETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSD-KVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLG--KNEILDMIKYGANYIFRSKDTDIR-DEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPP---KRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSV------QDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCD---------------------SATPEA-----ELERI--EEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKG-KNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREI----CDLEEKSRKSKGGNHAPES 2950
            +SP FV  G++RDYQ++GLNWLI L+ +  +GILADEMGLGKTLQTIS +GYL++ + + GP LII PKSTL NW  EF +W P+V  + L GD++TR+ ++R  IL   +DV++TSYEM I+EK+ LK+  + Y+ IDEAHRIKNE+S LS+I+R F S+NRLLITGTPLQNNLHELWALLNFL+P++F  S  FD+ F  N+ E+  E ++Q+LHSVL PFLLRR+KADVEK L PK E  +Y+G++ +Q + Y  +L KDID VNGA GK + K RLLNI+MQLRKC NHPYLF+G EPGPPYTTD HL+ N GKM++LDKLL +LKE+GSR+L+FSQM+R+LDILEDYC +R ++YCR+DGST H+ER  +IDEYNKP S+KF+F+L+TRAGGLGINL TAD VIL+DSDWNPQ DLQA DRAHRIGQ K V V+R +TEN +EE++I RA  KL+LD +VIQQG    +K   LG  K+++LDMI++GA  +F  K + +  D DID +L +GEQKT E+N K   LG  +L+  KF+  E+   S Y + G+ +++K+  K  +  WI P    +R  +  Y+VD Y+K+ +      A K    PK P        QDFQFFP  L  L +KE   F+K + Y V   D                     +A  E      EL+R   EEQ KI  A   T+ +   ++EL+ + FT W KRDF  FI A  KYGRDD+E+I   ++ KTPEEV+ Y+++FW R  E+   EKYL  +E GE K ++    +  L  K+ + + P H+L IQY  N   + Y   ED+FL+  ++K G   D +Y+ L+  + ++  F FDWFI++RT  EL +R  TL+TLI RE      + +++SR S      P S
Sbjct:  174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG--TGKKTASLGNSKDDLLDMIQFGAKNMFEKKASKVTVDADIDDILKKGEQKTQELNAKYQSLGLDDLQ--KFNGIENQ--SAYEWNGKSFQKKSNDK--VVEWINPSRRERRREQTTYSVDDYYKEIIGGGSKSASKQTPQPKAPRAPKVIHGQDFQFFPKELDALQEKEQLYFKKKVNYKVTSYDITGDIRNEGSDAEEEEGEYKNAANTEGHKGHEELKRRIEEEQEKINSAPDFTQEDELRKQELISKAFTNWNKRDFMAFINACAKYGRDDMENIKKSIDSKTPEEVEVYAKIFWERLKEINGWEKYLHNVELGEKKNEKLKFQETLLRQKIEQCKHPLHELIIQYPPNNARRTYNTLEDKFLLLAVNKYGLRADKLYEKLKQEIMMSDLFTFDWFIKTRTVHELSKRVHTLLTLIVREYEQPDANKKKRSRTSATREDTPLS 1082

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BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
Match: ISW1 (ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK [Source:SGD;Acc:S000000449])

HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 452/938 (48.19%), Postives = 622/938 (66.31%), Query Frame = 2

Query:  335 RFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEET--LVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA-GGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGR--LVEQKNNQLGKNEILDMIKYGANYIFRSKDT-------------DIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELE--------RIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVE-GKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQY--GTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIERE-----ICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSKHKAGEDELSVPNKKKK 3046
            +F +SP +V  G++R YQI+G+NWL+ L+ +   GILADEMGLGKTLQTIS +GYL++   +PGP L+I PKSTL NW+ E  RW P V    L GD+E R+ +I++++L  D+DV++ SYE+ I+EKS LKK N+ Y+ IDEAHRIKNE+S LS+++R F S+NRLLITGTPLQNNLHELWALLNFL+P++F+ + +FDD F+  S EE+   +V++LH+VL+PFLLRRIK+DVE  L PKKE+ +Y+G+S +Q++ Y KIL KD+D VNG+ G K  K RLLNI+MQLRKC NHPYLFDG EPGPPYTTD HLV N  K+ +LDKLL KLKE+GSR+L+FSQM+R+LDILEDYC +R Y+YCR+DGST H++R  +ID+YN P SKKF+F+L+TRAGGLGINL +ADVV+LYDSDWNPQ DLQA DRAHRIGQ K V+VFRL+T+N+VEE+I+ RA  KL+LD +VIQQ R  L +++N    K+ +L MI++GA  +F+S  +                D D+D LL + E KT  +N K + LG  +L+  KF+ D     S Y + G+D+++K          + P KRERK NY++D Y+KD L       P  PR PK       Q  PP+L  L +KE     K  GYV    D      ++             +  +  ++ LTE E   + +   +GFT W K +F++FI  + KYGR+ I++I+ ++  GKT EEV+ Y++ FWS    ++D EKYL  IE  E KI+R    + AL  K++ Y+ PF  L++++   +N  + Y+EEEDRF++ ML K G D+D+VY+ +R  +R  P F  D++ RSRT +EL RR +TL+  +E+E     + D   K R  K      E   G+ + +     T+  K   D   V +KK K
Sbjct:  184 QFRESPAYV-NGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHGAADVFKSGTSTGSAGTPEPGSGEKGDDIDLDELLLKSENKTKSLNAKYETLGLDDLQ--KFNQD-----SAYEWNGQDFKKKIQRDIISPLLLNPTKRERKENYSIDNYYKDVLNTGRSSTPSHPRMPKPHVFHSHQLQPPQLKVLYEKERMWTAKKTGYVPTMDDVKAAYGDISDEEEKKQKLELLKLSVNNSQPLTEEEEKMKADWESEGFTNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEEKIKRVKMQQEALRRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLLQCLEKEFNAGIVLDDATKDRMKK------EDENGKRIREEFADQTANEKENVD--GVESKKAK 1105

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BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
Match: CHD1 (Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes [Source:SGD;Acc:S000000966])

HSP 1 Score: 458.373 bits (1178), Expect = 7.094e-141
Identity = 255/587 (43.44%), Postives = 358/587 (60.99%), Query Frame = 2

Query:  335 RFEQ---SPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQIL----------PQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEP------GPPYTTDYH----LVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQ---KNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDI---DVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYR 2008
            RFE+    P F+ GGE+RD+Q+ G+NW+  L+    NGILADEMGLGKT+QT++ I +L   R   GPH+I+ P ST+  W++ F +W P +  IC +G+Q++R   IRE                ++V++T+YE  +K+++ L    + ++A+DEAHR+KN +S L E + +FK  NR+LITGTPLQNN+ EL AL+NFLMP  F      D  F     E+E  +  LH  ++PF+LRR+K DVEK LP K E  + + LS +Q E Y  IL K+   +  AG K     LLNI+ +L+K +NHPYLFD  E       G    T  +    L+ + GKMVLLD+LL +LK+ G R+L+FSQM RMLDIL DY   +  ++ RLDG+ P  +R+ISID +N P S  F+F+LSTRAGGLGINL TAD V+++DSDWNPQ DLQA  RAHRIGQ   V V+RL++++TVEE ++ RA  K+ L+  +I  G        K N+    E+  ++K+GA  +F + D   + ED+   DVL        AE +    +LGES+L   +F         +  FE  DY+
Sbjct:  360 RFEKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRD-TIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEID--FENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALT-AGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEPNAGELSAILKFGAGNMFTATDNQKKLEDLNLDDVL------NHAEDHVTTPDLGESHLGGEEF---------LKQFEVTDYK 927

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BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
Match: SNF2 (Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p [Source:SGD;Acc:S000005816])

HSP 1 Score: 442.195 bits (1136), Expect = 8.771e-134
Identity = 256/619 (41.36%), Postives = 378/619 (61.07%), Query Frame = 2

Query:  338 FEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN-----------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLL---NILMQLRKCTNHPYLFDGIEP--GPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDI------RDEDIDVLLARGEQKTA-------EMNKKLDELG-------ESNLRQL-------KFDNDESGVYSVYNFEGEDYREKAVSKFDM--DGWIQ 2050
             ++ P  ++GG ++DYQI+GL W++ L+ +  NGILADEMGLGKT+QTIS++ YL   +N+ GP+L+I P STL NW +EF +W P+++ I   G    R +  + +I   ++DV++T++E  IKE++ L K  ++++ IDE HR+KN +SKLS  + T + +  RL++TGTPLQNNL ELWALLNF++P++F S  +FD+ FN           I   EEETL  ++RLH VL+PFLLRR+K DVEK LP K E  +   +S LQ+ +Y ++L K   L  G       V L    N +MQL+K  NHP++F+ +E    P   T+  +    GK  LLD++L KLK  G R+L+F QMT+++DI+ED+  +    Y RLDG T  DER   +  +N P S+   F+LSTRAGGLG+NL TAD VI++D+DWNP  DLQAQDRAHRIGQ   VR+ RLIT N+VEE I+ RA  KL +D  VIQ G+  + K+    +  +L  +        + +++ +      +D +I+ +LAR +++ A       + +KK +ELG       +S L  +       +   +ES   +VYN  G   R+ A    +M  + W++
Sbjct:  755 IKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNER-KAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQML-KYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKF-DNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRLLEKSELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDNMSEEQWLR 1370

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BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
Match: STH1 (ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p [Source:SGD;Acc:S000001388])

HSP 1 Score: 432.95 bits (1112), Expect = 2.881e-132
Identity = 235/494 (47.57%), Postives = 323/494 (65.38%), Query Frame = 2

Query:  326 IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLS-EIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNI---NSLEEE----------TLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGG----KSDKVRLLNILMQLRKCTNHPYLFDGIEP--GPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRL 1747
            I  + ++ P  ++GG +++YQ+RGL W++ LY +  NGILADEMGLGKT+Q+IS+I YL   +   GP L+I P ST+ NW  EF +W PS+  I   G    R   ++ QI   ++DV++T+YE  IK+KS L K ++ ++ IDE HR+KN +SKLS  I   ++++NRL++TGTPLQNNL ELWALLNF++P++F S+  F+D FN    N+  +E           +++RLH VL+PFLLRR+K +VEK LP K E  I   LS LQ++LY ++ +K   L  GAG     K     L N +MQLRK  NHP++FD +E    P       L    GK  LLD++L K K  G R+L+F QMT+++DI+ED+   +   Y RLDGST  +ER   ++ +N P S  F F+LSTRAGGLG+NL TAD VI++D+DWNP  DLQAQDRAHRIGQ   VR+ RLIT ++VEE I+ RA  KL +D  VIQ G+ 
Sbjct:  454 IKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQR-HSLQHQIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQM-LKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKF 945

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BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
Match: EDO40761 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S667])

HSP 1 Score: 1229.54 bits (3180), Expect = 0.000e+0
Identity = 630/928 (67.89%), Postives = 764/928 (82.33%), Query Frame = 2

Query:  146 DKKKTIECILSKAEQFSKLKD--GG----TTPSKNK---FSS-----SSIGDHRHSXXXXXXXXXXXXXXX-XXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSL-EEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLI 2881
            D+      +L K E F+   +  GG    T+P K K   F S     S  GDHRH +TEQEE+E+LL +TK     +  FE+SP ++ GGEMRDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTIS++GY+K++RN+PGPH++I PKSTL NW+ EF RW PS++ +CLIG+QE R+  IR+ +LP +WDV VTSYEM I+EK+  KKF + Y+ IDEAHRIKNEKSKLSEIVR  +S NRLL+TGTPLQNNLHELWALLNFL+P++F+SS +FD  FN N+L EE+ LV+RLHSVL+PFLLRR+K+DVEKRL PKKE K+Y GL+ +QR  YTKILMKDID+VNGAG K+DK+RLLNILMQLRKC NHPYLFDG EPGPPYTTD HL+EN GKM +LDKLL +LK++GSR+L+FSQMTR+LDILEDYCLWR+YDYCRLDG TPH+ERQ  I+ +N PGS KF+FMLSTRAGGLGINLATAD+VILYDSDWNPQVDLQA DRAHRIGQ K V+VFR I+E+TVEERII RAEMKL+LD +VIQQGRLV+  N ++GK E+L MI++GA  +F SKD DI DEDID +LA+GE+KTAEM +K+   GE  LR+L  D   +   S+++FEGEDY+EK  S      WI+PPKRERKANYAVDQYF++ALR++EPKAP+APRPPKQP+VQD+QFFP RLFELLDKEIYAFRKSIGY VP  D   PE   ++ E Q  I E+E LTE E +E+++LL +GFT W+KR+F QFIKA EKYGRDD+++I  +VEGKTP+EV++Y+ VFW R +ELQD+E+ ++QIERGE+KIQRR++IK+ALD KMARYR+PFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGF+K+NVYD LR+A R APQFRFDWF++SRTA ELQRRC+TLITLI
Sbjct:   53 DRATRFNFLLEKTEIFAHFMNPSGGRKQPTSPLKMKAPAFPSRQRKVSECGDHRHRRTEQEEDEELLNQTKGAQTSILHFEESPNYIKGGEMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKNFRNVPGPHMVICPKSTLANWMAEFERWCPSIRAVCLIGNQEQRTAFIRDTMLPGEWDVCVTSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKLSEIVRELRSANRLLLTGTPLQNNLHELWALLNFLLPDVFSSSDDFDAWFNSNNLVEEKQLVERLHSVLRPFLLRRLKSDVEKRLLPKKETKVYTGLTKMQRSWYTKILMKDIDVVNGAG-KTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDVHLIENSGKMRVLDKLLARLKQEGSRVLIFSQMTRLLDILEDYCLWRQYDYCRLDGQTPHEERQAYINSFNMPGSTKFIFMLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAEMKLRLDAVVIQQGRLVD-PNLKVGKEEMLSMIRHGAEAVFASKDEDITDEDIDAILAKGEKKTAEMEEKMKTYGEGALRKLTLD---APTESIFHFEGEDYKEKQKSGSSFPRWIEPPKRERKANYAVDQYFREALRVSEPKAPRAPRPPKQPNVQDYQFFPTRLFELLDKEIYAFRKSIGYKVP-LDIEDPEGPDKQKEAQKLIDESEPLTEEEQSEKDQLLQEGFTNWSKREFNQFIKACEKYGRDDMDNICQEVEGKTPQEVREYAAVFWERNDELQDLERIMAQIERGESKIQRRISIKKALDAKMARYRSPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFEKENVYDELRMACRSAPQFRFDWFLKSRTAQELQRRCNTLITLI 974

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BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
Match: EDO39585 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9J4])

HSP 1 Score: 421.009 bits (1081), Expect = 2.416e-132
Identity = 227/527 (43.07%), Postives = 330/527 (62.62%), Query Frame = 2

Query:  335 RFEQSPYFV--IGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRV---------------IREQILPQD----WDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDG--IEPGPPYTTDYH---LVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDT 1837
            R+E+ P ++   GG++ +YQ  GLNWL   +   TN ILADEMGLGKT+QTIS +  L    +  GP L+  P STL NW  EF  W P +  +   GD+E+R+ +               ++   L +D    + V++TSYE+   + ++L+  ++  L +DEAHR+KN +SK    +  +    +LL+TGTPLQNNL ELW LL FL P  F +  NF  L   +++ +E  +++LH +L P +LRR+KADV K +P K E+ + + LS +Q++ Y  IL ++ + +N  G +  +V LLN++M+L+KC NHPYLF    +E     +  Y    L E  GK++LL K+L KL+EQG R+L+FSQMTRMLD+LED+     Y Y R+DGS     RQ +ID +N P S+ F F+LSTRAGGLGINLATAD V +YDSDWNP  D+QA  RAHRIGQ   V ++R +T ++VEERI   A+ K+ L ++V++ G L   K   + K+E+ D++K+G + +F+  DT
Sbjct:  243 RYEKQPAYLDETGGKLHEYQREGLNWLRFSWAQGTNTILADEMGLGKTIQTISFLYSLMKEGHSQGPFLVSAPLSTLVNWEREFEFWAPDMYVVTYAGDKESRATIRNFDFSFDEDAFKSGLKAYKLKKDSPVKFHVLLTSYELVSIDSASLQSIDWAMLVVDEAHRLKNNQSKFFRTLSDYNIGYKLLLTGTPLQNNLEELWNLLFFLDPVEFNNKNNF--LTEFDNVAKEDQIKKLHDILGPHMLRRLKADVLKGIPSKSELIVRVELSPMQKKYYKWILTRNFEALNTKGAQ--QVSLLNVMMELKKCCNHPYLFHAAALEAKRTQSGGYEPNSLTEASGKLMLLVKMLKKLREQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVMIYRFVTRSSVEERITQVAKKKMMLTHLVVRPG-LGSNKATIMSKSELDDILKFGTSELFKDDDT 764

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BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
Match: EDO48116 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RK66])

HSP 1 Score: 431.795 bits (1109), Expect = 3.020e-130
Identity = 223/490 (45.51%), Postives = 313/490 (63.88%), Query Frame = 2

Query:  344 QSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYH--------LVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQG 1741
            + P  ++GG +++YQ+ GL W++ L+ ++ NGILADEMGLGKT+QTI++  YL   + L GP L+I P STL NW  EF +W PS   +   G    R R     +    ++V++T+YE  +++K+ L K  + Y+ +DE HR+KN   KL++++ T + +Q+R+L+TGTPLQN L ELWALLNFL+P +F S + F+  FN         +   EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  +   +SILQR LY  +  K + L +G+     GK     L+N +MQLRK  NHP++F  IE        +H        +    GK  LLD++L KLK    R+L+F QMT ++ ILEDY  W+ + Y RLDG+T  ++R   +  +N   S  F+F+LSTRAGGLG+NL  AD V+++DSDWNP  DLQAQDRAHRIGQ K VRV RL+T N+VEE+I+A A  KL +D  VIQ G
Sbjct:  636 EQPSMLVGGRLKEYQLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGPFLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMR-RSAGAVLRTGKFNVVLTTYEYVMRDKAILAKVRWKYMVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQNRLPELWALLNFLLPTIFKSVSTFEQWFNAPFAMTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVVKCDMSILQRILYNHMYKKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEESIAEHLGFHGGIVTGPDIYRASGKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYLRLDGTTKSEDRGQLLSLFNAKDSPYFVFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQEKEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQAG 1124

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BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
Match: EDO31943 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWF7])

HSP 1 Score: 404.445 bits (1038), Expect = 1.072e-125
Identity = 234/571 (40.98%), Postives = 348/571 (60.95%), Query Frame = 2

Query:  365 GGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDW---DVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMF--ASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEIL--DMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVY----SVYNFEGEDYREKA----VSKFD 2032
            G  +R YQ+ G+ W+    L+    IL DEMGLGKT+QTIS++  LK      G  L+++P S + NW NE  R+  S+K + LIG +E R   I +  L QD    DV++TSYE+C++E S L++F++  +A+DEAHR+KN +S L   +  FK    +L+TGTP+QNNL EL++LL+F+ P +F       F+  F   +   +     L  +L PFLLRR+K++V   LP K E+ +Y G+S LQ++ Y  ILMKD D+ +  G   +K+   +IL  LRKC NHPYLFDG+EP  P+    HL+   GK+  +D+LL+ L ++G ++L+FSQMTRMLDI++DY  +R Y Y RLDGS   +ER I+I  +N+     F+F+LST+AGG G+NL +AD VI  DSD+NPQ DLQA  RAHRIGQT+ V++ RL+  NTVEE I+  A+ K++L N VI+ G++ +          +L  +++K+G   +F S++  +      + L  G  +      + D+  + +L  L  + +  G      S+Y +EG DY + A    V+ FD
Sbjct:   13 GITLRPYQLEGVGWMRDCALTGHGCILGDEMGLGKTIQTISVLLLLKRTIKHTGLFLVLSPLSVMANWKNEIKRFTKSLKVLSLIGSKEERE--ITKNKLFQDIKNIDVLLTSYEICLRETSFLQRFHWSAVAVDEAHRLKNSQSLLYTELIQFKYDFSILLTGTPVQNNLKELYSLLSFIAPSIFDLEYVEEFETAFKNLATGRDNTNSDLPQLLSPFLLRRVKSEVMVDLPEKSEVILYAGMSELQKKYYKAILMKDYDIFSTDGPSRNKLN--SILTNLRKCVNHPYLFDGVEP-EPFALGEHLITASGKLHAIDQLLSYLYKRGHKVLMFSQMTRMLDIVQDYLGYRGYAYERLDGSVRGEERYIAIKNFNEE-QDNFIFLLSTKAGGQGLNLMSADTVIFVDSDYNPQNDLQAAARAHRIGQTRPVKIIRLVGRNTVEEIILKHADDKMRLTNNVIEGGQVYDSSKIVASYRTLLLANILKFGLEKLFESEERYV------IYLILGASRNGRWIVE-DKTPKPDLETLSTNQELQGTVNHFTSMYVYEGRDYSKGASDEDVAAFD 570

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BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
Match: EDO47298 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMN4])

HSP 1 Score: 413.69 bits (1062), Expect = 7.643e-125
Identity = 234/544 (43.01%), Postives = 328/544 (60.29%), Query Frame = 2

Query:  332 NRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRW--------VPSVKPICLIGDQETRSRVIREQILPQ--DWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDID-LVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEP------GPPYTTDYH---LVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQ--KNNQLGKNEILDMIKYGANYIFRSKDTD----IRDEDIDVLLARGEQ 1885
            ++ E SP +     +R+YQ+ G+NWL+  + +  N ILADEMGLGKT+Q+I+ +  ++ Y  + GP+L+I P ST+ NW  EF  W          S     LI + E   R    Q +P    + V++T+YE+ I +   L    +  + IDEAHR+KN   KL E +   + ++R+L+TGTPLQNN+ EL++LLNFL P  F S   F  L     L+ E+ V +L  +LKP +LRR+K DVEK + PK+E  I + L+ +Q++ Y  IL ++   L  G    ++   L+N +M+LRKC NHP+L  G E       G  +  D H   ++E  GK+VL+ KLL KLK  G ++L+FSQM R LDILEDY +  KY Y R+DG    + RQ +ID ++KP S +F+F+L TRAGGLGINL  AD VI++DSDWNPQ DLQAQ R HRIGQ+++V+V+RLIT N+ E  +  RA MKL LD  V+Q     E    N Q+ K EI D++K GA      +D D      +EDID +L R  Q
Sbjct:  215 HKLETSPVYKDENTLREYQLEGVNWLMFCWCNRQNSILADEMGLGKTIQSIAFLFEMQRY-GIRGPNLVIAPLSTISNWQREFESWNDINAVVYHGSASSRHLIQEYEFYYRDEHGQPIPNIFKFQVLITTYEIIIADNMQLSTVPWRAVIIDEAHRLKNRNCKLLEGLNNLQMEHRILLTGTPLQNNVEELFSLLNFLEPSQFPSQGAF--LMEFGDLKTESQVDKLKQLLKPMMLRRLKEDVEKNIAPKEETIIEVELTTVQKKFYRAILERNFAFLAKGTSSTANVPNLMNTMMELRKCCNHPFLITGAEEKILQEYGREHV-DRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRCLDILEDYLVHMKYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDKAVLQSMNTKENAGNNGQMSKREIEDLLKRGAYGAIMEEDNDDASKFCEEDIDQILERRTQ 754

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BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
Match: smarca5 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:NCBI gene;Acc:101161213])

HSP 1 Score: 1244.57 bits (3219), Expect = 0.000e+0
Identity = 640/943 (67.87%), Postives = 774/943 (82.08%), Query Frame = 2

Query:  128 KEIVEFDKKKTIECILSKAEQFSKL-----KDGGTTPSKNKFSSSSI-----------GDHRHSXXXXXXXXXXXXXXXXXV-IVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINS-LEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDL 2902
            +E V+ D+    E +L + E F+       +   T+P K K     I           GD+RH +TEQEE+E+LL E+ +   +  RF+ SP +V  G+MRDYQ+RGLNWLI LY +  NGILADEMGLGKTLQTI+++GY+KHYRN+PGPH+++ PKSTL NW+NEF RWVPS++ +CLIGD+  R+ +IR+ +LP +WDV VTSYEM I EK+  KKFN+ YL IDEAHRIKNEKSKLSEIVR FK+ NRLL+TGTPLQNNLHELWALLNFL+P++F SS +FD  F+ N+ L ++ LV+RLH+VL+PFLLRRIKADVEK L PKKE+KIY+GLS +QRE YTKILMKDID++N AG K DK+RLLN+LMQLRKC NHPYLFDG EPGPPYTTD HLV N GKMV+LDKLL K+K QGSR+L+FSQMTR+LDILEDYC+WR Y+YCRLDG TPH+ERQISI+ YN+P S KF+FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA DRAHRIGQ K VRVFR ITENTVEERI+ RAEMKL+LD+IVIQQGRLV+   N+LGK+E+L +I++GA ++F SKD++I D+DID +L RGE+KT EM +KL  LGES+LR    D + S   SVY FEGEDYREK   K  +  WI+PPKRERKANYAVD YF++ALR++EPKAPKAPRPPKQP+VQDFQFFPPRLFELL+KEI  +RK+IGY VP+       A++++ EEQ KI EAE+L+E E+ E+E LL QGFT W KRDF QFIKANEK+GRDDIE+I+ +VEGK+PEEV +YS VFW RCNELQD+EK ++QIERGEA+IQRR++IK+ALD K+ RY+APFHQLRI YGTNKGKNYTEEEDRFLICMLHKLGFDK++VYD LR  +R +PQFRFDWF++SRTA+ELQRRC+TLITLIERE  +L
Sbjct:   67 EEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDNRHRRTEQEEDEELLNESTKTTNVCTRFDDSPSYVKAGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRNERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHTVLRPFLLRRIKADVEKTLLPKKEVKIYVGLSKMQREWYTKILMKDIDILNSAG-KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKMKVQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQISINAYNEPNSTKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKDSEITDDDIDAILERGERKTMEMKEKLSSLGESSLRNFTMDTENS---SVYTFEGEDYREK---KKVITNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDLPNSAQVQK-EEQAKIDEAEALSEEELEEKENLLQQGFTIWNKRDFNQFIKANEKWGRDDIENIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMEL 1001

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
Match: chd1l (chromodomain helicase DNA binding protein 1 like [Source:NCBI gene;Acc:101159810])

HSP 1 Score: 439.113 bits (1128), Expect = 5.910e-138
Identity = 236/553 (42.68%), Postives = 353/553 (63.83%), Query Frame = 2

Query:  365 GGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSA--NFDDLFN--INSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGR--LVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDY 2005
            G ++R YQ+ G+ WLIQ   +    IL DEMGLGKT QTI ++ Y+       GP ++++P S L+NW  E   + PS+  +C  GD++ R+  ++ Q   QD+ V++T+YE+C+K+ S L+++ +  L +DEAHR+KN  S L + +  F    R+L+TGTP+QN+L EL++LL+F+ P +FA++   +F D ++  I+ L + T    L SVL+PFLLRRIK++V   LP K E+ +Y G+S LQ++ Y  ILM+D+D      G   K RLLNILM LRKC +HPYLFDG+EP  P+    HL+E  GK+ LLD +L  L + G R+LLFSQMTRMLDIL+DY  +R Y Y RLDGS   +ER +S+  ++      F+F+LST+AGG+GINL  AD VI  DSD+NPQ DLQA  R HRIGQ + V+  RL+  +TVEE + +RA  KL+L N VIQ GR  L++Q ++     ++ +++K+G + +  S ++ ++D ++  +           ++ L  + E    + + ++DE  +  +Y FEG DY
Sbjct:   32 GIQLRGYQLDGVQWLIQNLQNQQGCILGDEMGLGKTCQTIGLLVYVSGALGKKGPFMVLSPLSVLENWRKELESFAPSLTVLCYQGDKDRRAE-MQLQASSQDFQVLLTTYELCLKDASFLRRWRWEVLVVDEAHRLKNPNSLLHQTLSEFSVDFRVLLTGTPIQNSLQELYSLLSFIQPSIFAANDVDSFVDYYSRVISLLSKAT---ELQSVLEPFLLRRIKSEVAVDLPKKTELVVYHGMSALQKKYYKAILMRDLDAFGNEQGS--KNRLLNILMNLRKCVDHPYLFDGVEP-EPFEIGEHLIEASGKLCLLDNMLAYLHKGGHRVLLFSQMTRMLDILQDYMEYRGYSYERLDGSVRGEERNLSVKNFST--KDIFVFLLSTKAGGVGINLTAADTVIFVDSDFNPQNDLQAAARCHRIGQNRPVKQIRLLARDTVEEIMYSRAASKLQLTNTVIQDGRFSLLDQAHSAAAGVQLSEILKFGVDKLLSSDESSVQDVNLQNIFGSSRGGQWVDDEDLKAVAEEEEEEERPESDE--LNHMYIFEGVDY 573

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BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
Match: ENSORLT00000004949.2 (transcription activator BRG1 [Source:NCBI gene;Acc:101162023])

HSP 1 Score: 443.736 bits (1140), Expect = 2.603e-135
Identity = 235/522 (45.02%), Postives = 330/522 (63.22%), Query Frame = 2

Query:  323 VIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRT-FKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFN---------INSLEEETL--VQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGA----GGKSDKVRLLNILMQLRKCTNHPYLFD--------------GIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMI 1798
             +  + E+    +I G+++ YQI+GL WL+ LY ++ NGILADEMGLGKT+QTI++I YL  ++ L GP+LII P STL NW+ EF +W PSV  +   G    R R    Q+    ++V++T+YE  IK+K  L K  + Y+ +DE HR+KN   KL++++ T + +  R+L+TGTPLQN L ELWALLNFL+P +F S + F+  FN         ++  EEET+  ++RLH VL+PFLLRR+K +VE +LP K E  I   +S LQR LY  +  K + L +G+     GK     L+N +MQLRK  NHPY+F               GI  GP       L    GK  +LD++L KL+    ++LLF QMT ++ I+EDY  +R + Y RLDG+T  ++R + +  +N P S+ F+F+LSTRAGGLG+NL +AD V+++DSDWNP  DLQAQDRAHRIGQ   VRV RL T N+VEE+I+A A+ KL +D  VIQ G + +QK++   +   L  I
Sbjct:  640 AVTEKVEKQSTLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGP------DLYRASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRTFKYLRLDGTTKAEDRGMLLKTFNSPESEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAI 1153

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BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:101160654])

HSP 1 Score: 446.432 bits (1147), Expect = 4.239e-134
Identity = 253/590 (42.88%), Postives = 364/590 (61.69%), Query Frame = 2

Query:  371 EMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRV-----IREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTD---YHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ----GRLVEQKN------NQLGKNEILDMIKYGANYIFR---SKDTDIRDEDIDVLLARGEQKTAEM-NKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKA 2074
            E+RDYQ+ GLNWL   +    + ILADEMGLGKT+QTIS + YL H   L GP L++ P STL +W  EF  W P +  +  IGD  +R  +     +  Q     ++ ++T+YE+ +K+K  L   N+ +L +DEAHR+KN+ S L + +  F+S +RLLITGTPLQN+L ELW+LL+FLMP+ F S  +F+D         +   Q LH VL+PFLLRR+K DVEK LP K E  + + ++  Q++ Y  IL ++   ++  G +      LNI+M+L+KC NH +L    E G           +V   GK+VLLDKLL +L+E+G+R+L+FSQM RMLDIL  Y   +++ + RLDGS   + R+ ++D +N  GS+ F F+LSTRAGGLGINLA+AD V+++DSDWNPQ DLQAQ RAHRIGQ K V ++RL+T+ TVEE II RA+ K+ LD++VIQ+    GR V   N      N   K E+  ++K+GA  +F+    ++++ ++ DID +L   E + ++  +   DEL    L Q K  N  S   + + FE     E+ V ++D    I P ++ RKA
Sbjct:  461 ELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFETWAPDMNVVVYIGDVMSRKTIRDYEWVNHQTKRIRFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKG---RDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILTRNYKALS-KGTRGSSSGFLNIVMELKKCCNHCFLIKQPEDGDGEVQQDVLQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAKYLTKKRFPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDEL----LSQFKVANFSSMEETTHEFE-----ERPVREWDD---IIPEEQRRKA 1034

[Close]

BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
Match: chd2 (chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:101160654])

HSP 1 Score: 446.817 bits (1148), Expect = 5.652e-134
Identity = 253/590 (42.88%), Postives = 364/590 (61.69%), Query Frame = 2

Query:  371 EMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRV-----IREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTD---YHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQ----GRLVEQKN------NQLGKNEILDMIKYGANYIFR---SKDTDIRDEDIDVLLARGEQKTAEM-NKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKA 2074
            E+RDYQ+ GLNWL   +    + ILADEMGLGKT+QTIS + YL H   L GP L++ P STL +W  EF  W P +  +  IGD  +R  +     +  Q     ++ ++T+YE+ +K+K  L   N+ +L +DEAHR+KN+ S L + +  F+S +RLLITGTPLQN+L ELW+LL+FLMP+ F S  +F+D         +   Q LH VL+PFLLRR+K DVEK LP K E  + + ++  Q++ Y  IL ++   ++  G +      LNI+M+L+KC NH +L    E G           +V   GK+VLLDKLL +L+E+G+R+L+FSQM RMLDIL  Y   +++ + RLDGS   + R+ ++D +N  GS+ F F+LSTRAGGLGINLA+AD V+++DSDWNPQ DLQAQ RAHRIGQ K V ++RL+T+ TVEE II RA+ K+ LD++VIQ+    GR V   N      N   K E+  ++K+GA  +F+    ++++ ++ DID +L   E + ++  +   DEL    L Q K  N  S   + + FE     E+ V ++D    I P ++ RKA
Sbjct:  502 ELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFETWAPDMNVVVYIGDVMSRKTIRDYEWVNHQTKRIRFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKG---RDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILTRNYKALS-KGTRGSSSGFLNIVMELKKCCNHCFLIKQPEDGDGEVQQDVLQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAKYLTKKRFPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDEL----LSQFKVANFSSMEETTHEFE-----ERPVREWDD---IIPEEQRRKA 1075

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BLAST of SWI:SNF matrix associated vs. Planmine SMEST
Match: SMESG000013560.1 (SMESG000013560.1)

HSP 1 Score: 1944.47 bits (5036), Expect = 0.000e+0
Identity = 975/979 (99.59%), Postives = 977/979 (99.80%), Query Frame = 2

Query:  116 MEPVKEIVEFDKKKTIECILSKAEQFSKLKDGGTTPSKNKFSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSKHKAGEDELSVPNKKKKSV 3052
            ME VKEIVEFDKKKTIECILSKAEQFSKLKDGGTTPSKNKFSSSSIGDHRHSKTEQEE+EDLLTETKQDVIVNRFEQSPYFVIGGEMRDYQ+RGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRW PSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEPKAPKAPRPPKQPSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSKHKAGEDELSVPNKKKKSV
Sbjct:    1 MESVKEIVEFDKKKTIECILSKAEQFSKLKDGGTTPSKNKFSSSSIGDHRHSKTEQEEDEDLLTETKQDVIVNRFEQSPYFVIGGEMRDYQVRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWAPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEPKAPKAPRPPKQPSVQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQLVSKNSGSHTSKHKAGEDELSVPNKKKKSV 979

[Close]

BLAST of SWI:SNF matrix associated vs. Planmine SMEST
Match: SMESG000017699.1 (SMESG000017699.1)

HSP 1 Score: 1283.86 bits (3321), Expect = 0.000e+0
Identity = 628/912 (68.86%), Postives = 751/912 (82.35%), Query Frame = 2

Query:  227 KNKFSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKF---DNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXS-VQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPES 2950
            KN   + S  D+RH KTE+EE+++LL +  ++  V RFE +P++V GGEMRDYQIRGLNW+IQLYLS+ NGILADEMGLGKTLQTISMIGYLKH+    G  ++ITPKSTLQNW+NE  RW PS+  I LIGDQ+ R  +I  Q+  + WDV+VT+YEMCIKEKS +KK+NY+YLAIDEAHRIKNE SKLSEIVR F S++RLLITGTPLQNNLHELWALLNFLMP+ F+SS NFD+LFN + + E+  VQ+LHS+LKP+LLRR+K DVEK+LPPKKEIK+YIGLS +QRELYTKILMKD+D +N    K +K RL NILMQLRKCTNHPYLFDGIEPGPPYTTDYHLV NCGKM+LLDKLL++LK +GSR+L+F+QMTRMLDILEDYC WR ++YCRLDG T H +RQISID+YN P S KFLFMLSTRAGGLGINL +ADVVI+YDSDWNPQVDLQAQDRAHRIGQ KTVRVFRLITENTVEERII RAEMKLKLDNIVIQQGRLVE KNNQLGKN++L+MIK+GANYIFRSKD+DI+DEDIDVLLAR E KTAE++KK+DELGES+L  LKF    +D    YSVYNFEGE+Y++KA +K  +  WI+PPKRERKANYAVD YF+DA + ++ K+      P +   V DFQFFP RL ELLDKEIY FR+S+GY VPK DS   EA+ +R  EQ KI +AE LTE E+ E+++LL +GF  W K+DF  FIKANEK+GR++I  I   V GKTPEEVK+YS VFW R  E+ D EKYL QIE+GE K++R+   +RALDLK+A+Y  PFHQL+IQY  NKGK Y+E+EDRFLICMLHK G D ++VY+NLRLAVRLAPQFRF+WF+++RT+IELQRRC+TLI LIE+EIC+++    K    N + +S
Sbjct:    3 KNDEPTLSTEDNRHRKTEEEEDKELLNDNAKEDQVFRFESTPWYVSGGEMRDYQIRGLNWMIQLYLSNNNGILADEMGLGKTLQTISMIGYLKHFSGKKGHFIVITPKSTLQNWVNEINRWAPSLTSISLIGDQQARHEIIH-QLQTKQWDVLVTTYEMCIKEKSAIKKYNYVYLAIDEAHRIKNENSKLSEIVREFNSEHRLLITGTPLQNNLHELWALLNFLMPDEFSSSDNFDELFNNDKMAEQNQVQKLHSILKPYLLRRLKIDVEKKLPPKKEIKVYIGLSAIQRELYTKILMKDLDTLNSTAKKVEKTRLQNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVANCGKMILLDKLLSRLKAEGSRVLVFTQMTRMLDILEDYCRWRGHEYCRLDGQTQHSDRQISIDDYNSPNSTKFLFMLSTRAGGLGINLTSADVVIIYDSDWNPQVDLQAQDRAHRIGQKKTVRVFRLITENTVEERIIGRAEMKLKLDNIVIQQGRLVEHKNNQLGKNDLLEMIKHGANYIFRSKDSDIKDEDIDVLLARAEVKTAELSKKIDELGESSLSALKFDTAADDAGAAYSVYNFEGENYKDKANNKEPLINWIEPPKRERKANYAVDLYFQDAFKASDSKSSIRAPRPPKQPIVHDFQFFPSRLIELLDKEIYFFRQSVGYKVPKVDSDDKEAKKQRNAEQAKINKAEPLTEKEIVEKDQLLTEGFINWMKKDFLAFIKANEKWGRNNIIEICEQVPGKTPEEVKEYSLVFWKRFREINDYEKYLLQIEKGEMKLERKNMTRRALDLKVAQYEYPFHQLKIQYNGNKGKYYSEDEDRFLICMLHKFGIDNEDVYENLRLAVRLAPQFRFNWFVKARTSIELQRRCTTLINLIEKEICEIDNSRAKDVNNNKSRKS 913

[Close]

BLAST of SWI:SNF matrix associated vs. Planmine SMEST
Match: SMESG000017699.1 (SMESG000017699.1)

HSP 1 Score: 1283.09 bits (3319), Expect = 0.000e+0
Identity = 628/912 (68.86%), Postives = 751/912 (82.35%), Query Frame = 2

Query:  227 KNKFSSSSIGDHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISIDEYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKF---DNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXS-VQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPES 2950
            KN   + S  D+RH KTE+EE+++LL +  ++  V RFE +P++V GGEMRDYQIRGLNW+IQLYLS+ NGILADEMGLGKTLQTISMIGYLKH+    G  ++ITPKSTLQNW+NE  RW PS+  I LIGDQ+ R  +I  Q+  + WDV+VT+YEMCIKEKS +KK+NY+YLAIDEAHRIKNE SKLSEIVR F S++RLLITGTPLQNNLHELWALLNFLMP+ F+SS NFD+LFN + + E+  VQ+LHS+LKP+LLRR+K DVEK+LPPKKEIK+YIGLS +QRELYTKILMKD+D +N    K +K RL NILMQLRKCTNHPYLFDGIEPGPPYTTDYHLV NCGKM+LLDKLL++LK +GSR+L+F+QMTRMLDILEDYC WR ++YCRLDG T H +RQISID+YN P S KFLFMLSTRAGGLGINL +ADVVI+YDSDWNPQVDLQAQDRAHRIGQ KTVRVFRLITENTVEERII RAEMKLKLDNIVIQQGRLVE KNNQLGKN++L+MIK+GANYIFRSKD+DI+DEDIDVLLAR E KTAE++KK+DELGES+L  LKF    +D    YSVYNFEGE+Y++KA +K  +  WI+PPKRERKANYAVD YF+DA + ++ K+      P +   V DFQFFP RL ELLDKEIY FR+S+GY VPK DS   EA+ +R  EQ KI +AE LTE E+ E+++LL +GF  W K+DF  FIKANEK+GR++I  I   V GKTPEEVK+YS VFW R  E+ D EKYL QIE+GE K++R+   +RALDLK+A+Y  PFHQL+IQY  NKGK Y+E+EDRFLICMLHK G D ++VY+NLRLAVRLAPQFRF+WF+++RT+IELQRRC+TLI LIE+EIC+++    K    N + +S
Sbjct:   26 KNDEPTLSTEDNRHRKTEEEEDKELLNDNAKEDQVFRFESTPWYVSGGEMRDYQIRGLNWMIQLYLSNNNGILADEMGLGKTLQTISMIGYLKHFSGKKGHFIVITPKSTLQNWVNEINRWAPSLTSISLIGDQQARHEIIH-QLQTKQWDVLVTTYEMCIKEKSAIKKYNYVYLAIDEAHRIKNENSKLSEIVREFNSEHRLLITGTPLQNNLHELWALLNFLMPDEFSSSDNFDELFNNDKMAEQNQVQKLHSILKPYLLRRLKIDVEKKLPPKKEIKVYIGLSAIQRELYTKILMKDLDTLNSTAKKVEKTRLQNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVANCGKMILLDKLLSRLKAEGSRVLVFTQMTRMLDILEDYCRWRGHEYCRLDGQTQHSDRQISIDDYNSPNSTKFLFMLSTRAGGLGINLTSADVVIIYDSDWNPQVDLQAQDRAHRIGQKKTVRVFRLITENTVEERIIGRAEMKLKLDNIVIQQGRLVEHKNNQLGKNDLLEMIKHGANYIFRSKDSDIKDEDIDVLLARAEVKTAELSKKIDELGESSLSALKFDTAADDAGAAYSVYNFEGENYKDKANNKEPLINWIEPPKRERKANYAVDLYFQDAFKASDSKSSIRAPRPPKQPIVHDFQFFPSRLIELLDKEIYFFRQSVGYKVPKVDSDDKEAKKQRNAEQAKINKAEPLTEKEIVEKDQLLTEGFINWMKKDFLAFIKANEKWGRNNIIEICEQVPGKTPEEVKEYSLVFWKRFREINDYEKYLLQIEKGEMKLERKNMTRRALDLKVAQYEYPFHQLKIQYNGNKGKYYSEDEDRFLICMLHKFGIDNEDVYENLRLAVRLAPQFRFNWFVKARTSIELQRRCTTLINLIEKEICEIDNSRAKDVNNNKSRKS 936

[Close]

BLAST of SWI:SNF matrix associated vs. Planmine SMEST
Match: SMESG000017689.1 (SMESG000017689.1)

HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0
Identity = 337/487 (69.20%), Postives = 398/487 (81.72%), Query Frame = 2

Query: 1502 MLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNNQLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLDELGESNLRQLKFD---NDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRERKANYAVDQYFKDALRINEXXXXXXXXXXXXXS-VQDFQFFPPRLFELLDKEIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREELLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRVFWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFDWFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPES 2950
            MLSTRAGGLGINL +ADVVI+YDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERII RAEMKLKLDNIVIQQGRLVE KNNQLGKN++L+MIK+GANYIFRSKD+DI+DEDIDVLLAR E KTAE++KK+D LGES+L  LKFD   +D S  YSVYNFEGE+YR+KA +K  +  WI+PPKRERKANYAVD YFKDAL+ N+PK+      P +   V DFQFFP RL ELLDKEIY FRK+IGY VPK DS   EA+  R  EQ KI  AE +TE E+ E+++LL +GFT W K+DF  FIKANEK GR+++  I   V GKT +EVK+YS VFW R  E+ D EKYL QIERGE K++R+  I+RALDLKMA+Y++PFHQL+IQYG NKGKNY+EEEDRFL+CMLHK G D ++VY+NLRLAVRLAPQFRF+WF++SRT++ELQRRC+TLI LIE+EIC+++    K    N   +S
Sbjct:    1 MLSTRAGGLGINLTSADVVIIYDSDWNPQVDLQAQDRAHRIGQTKTVRVFRLITENTVEERIIGRAEMKLKLDNIVIQQGRLVEHKNNQLGKNDLLEMIKHGANYIFRSKDSDIKDEDIDVLLARAEVKTAELSKKIDALGESSLSALKFDTAADDGSAAYSVYNFEGENYRDKANNKEPLLNWIEPPKRERKANYAVDLYFKDALKQNDPKSSHKAPRPPKQPIVHDFQFFPSRLIELLDKEIYIFRKNIGYKVPKVDSDEKEAKKLRAIEQAKINRAEPMTEEEIVEKDQLLTEGFTNWAKKDFLAFIKANEKCGRNNMNEICEQVPGKTSKEVKEYSLVFWKRFREINDYEKYLLQIERGETKLERKNIIRRALDLKMAQYKSPFHQLKIQYGGNKGKNYSEEEDRFLMCMLHKFGIDNEDVYENLRLAVRLAPQFRFNWFVKSRTSLELQRRCTTLINLIEKEICEMDNSRPKDVNNNKLKKS 487

[Close]

BLAST of SWI:SNF matrix associated vs. Planmine SMEST
Match: SMESG000017691.1 (SMESG000017691.1)

HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0
Identity = 287/400 (71.75%), Postives = 343/400 (85.75%), Query Frame = 2

Query:  257 DHRHSXXXXXXXXXXXXXXXXXVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQLYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQNWINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKEKSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNNLHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLRRIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDKVRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLNKLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQI 1456
            DHRH KTE+EE+++LL  + +   + RFE++P+++  GEMRDYQIRGLNWLIQLYLS+ NGILADEMGLGKTLQTISMIGYLKH+    G  L+ITPKSTLQNW+NE  RW PS+  I LIGDQ+ R  +I  Q+  + WDV+VT+YEMCIKEKST+KK++Y YLAIDEAHRIKNE SKLSEIVR F S+NRLLITGTPLQNNLHELWALLNFLMP+ F+SS NFD+LFN + + E+  VQ+LHS+LKP+LLRR+K DVEK+LPPKKEIK+YIGLS +QRELYTKILMKD+D +N A  K++K RL NILMQLRKCTNHPYLFDG+EPGPPYTTDYHLV NCGKM+LLDKLL++LK +GSR+L+F+QMTRMLDILEDYC WR ++YCRLDG T H +RQ+
Sbjct:   36 DHRHRKTEEEEDKELLNASAETDKLFRFEKTPWYIASGEMRDYQIRGLNWLIQLYLSNNNGILADEMGLGKTLQTISMIGYLKHHTEKKGHFLVITPKSTLQNWVNEINRWAPSLTSISLIGDQQARHEIIH-QLQTKQWDVLVTTYEMCIKEKSTIKKYSYAYLAIDEAHRIKNENSKLSEIVRQFNSENRLLITGTPLQNNLHELWALLNFLMPDEFSSSYNFDELFNTDKMAEQNQVQKLHSILKPYLLRRLKIDVEKKLPPKKEIKVYIGLSAIQRELYTKILMKDLDTLNSAANKAEKTRLQNILMQLRKCTNHPYLFDGVEPGPPYTTDYHLVANCGKMILLDKLLSRLKAEGSRVLVFTQMTRMLDILEDYCRWRGHEYCRLDGQTQHSDRQV 434

The following BLAST results are available for this feature:

BLAST of SWI:SNF matrix associated vs. Ensembl Human
BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
BLAST of SWI:SNF matrix associated vs. Ensembl Fly
BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
BLAST of SWI:SNF matrix associated vs. TrEMBL
BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
BLAST of SWI:SNF matrix associated vs. Planmine SMEST

BLAST of SWI:SNF matrix associated vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
SMARCA5	0.000e+0	72.03	SWI/SNF related, matrix associated, actin dependen...	[more]
SMARCA1	0.000e+0	65.69	SWI/SNF related, matrix associated, actin dependen...	[more]
SMARCA1	0.000e+0	64.89	SWI/SNF related, matrix associated, actin dependen...	[more]
SMARCA1	0.000e+0	66.12	SWI/SNF related, matrix associated, actin dependen...	[more]
CHD2	2.038e-142	43.77	chromodomain helicase DNA binding protein 2 [Sourc...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
isw-1	0.000e+0	60.31	Chromatin-remodeling complex ATPase chain isw-1 [...	[more]
swsn-4	1.809e-138	46.96	SWI/SNF nucleosome remodeling complex component; S...	[more]
pqn-15	2.280e-133	44.74	Prion-like-(Q/N-rich)-domain-bearing protein [Sou...	[more]
chd-1	9.887e-131	43.66	Chromodomain and Helicase Domain protein [Source:...	[more]
chd-3	9.748e-126	41.71	Chromodomain-helicase-DNA-binding protein 3 homolo...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Iswi	0.000e+0	68.42	gene:FBgn0011604 transcript:FBtr0087841	[more]
Iswi	0.000e+0	68.42	gene:FBgn0011604 transcript:FBtr0087842	[more]
Iswi	0.000e+0	68.42	gene:FBgn0011604 transcript:FBtr0087843	[more]
brm	1.788e-135	45.12	gene:FBgn0000212 transcript:FBtr0333580	[more]
brm	2.068e-135	45.12	gene:FBgn0000212 transcript:FBtr0075524	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
smarca1	0.000e+0	63.77	SWI/SNF related, matrix associated, actin dependen...	[more]
smarca5	0.000e+0	68.19	SWI/SNF related, matrix associated, actin dependen...	[more]
chd1l	1.857e-141	44.12	chromodomain helicase DNA binding protein 1-like [...	[more]
SMARCA4	4.708e-135	45.58	transcription activator BRG1-like [Source:NCBI gen...	[more]
smarca2	7.214e-134	44.67	SWI/SNF related, matrix associated, actin dependen...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mettl6	0.000e+0	72.16	methyltransferase like 6 [Source:Xenbase;Acc:XB-GE...	[more]
mettl6	0.000e+0	71.51	methyltransferase like 6 [Source:Xenbase;Acc:XB-GE...	[more]
mettl6	0.000e+0	71.86	methyltransferase like 6 [Source:Xenbase;Acc:XB-GE...	[more]
mettl6	0.000e+0	72.38	methyltransferase like 6 [Source:Xenbase;Acc:XB-GE...	[more]
anxa4	0.000e+0	67.39	annexin A4 [Source:Xenbase;Acc:XB-GENE-854498]	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Smarca5	0.000e+0	71.80	SWI/SNF related, matrix associated, actin dependen...	[more]
Smarca1	0.000e+0	65.29	SWI/SNF related, matrix associated, actin dependen...	[more]
Smarca1	0.000e+0	66.56	SWI/SNF related, matrix associated, actin dependen...	[more]
Smarca1	0.000e+0	66.56	SWI/SNF related, matrix associated, actin dependen...	[more]
Smarca1	0.000e+0	63.32	SWI/SNF related, matrix associated, actin dependen...	[more]

BLAST of SWI:SNF matrix associated vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q24368\|ISWI_DROME	0.000e+0	68.42	Chromatin-remodeling complex ATPase chain Iswi OS=...	[more]
sp\|O60264\|SMCA5_HUMAN	0.000e+0	72.03	SWI/SNF-related matrix-associated actin-dependent ...	[more]
sp\|Q91ZW3\|SMCA5_MOUSE	0.000e+0	71.80	SWI/SNF-related matrix-associated actin-dependent ...	[more]
sp\|Q6PGB8\|SMCA1_MOUSE	0.000e+0	66.56	Probable global transcription activator SNF2L1 OS=...	[more]
sp\|P28370\|SMCA1_HUMAN	0.000e+0	66.12	Probable global transcription activator SNF2L1 OS=...	[more]

BLAST of SWI:SNF matrix associated vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A5J4P1W5	0.000e+0	75.21	SWI/SNF-related matrix-associated actin-dependent ...	[more]
A0A4Z2DMP6	0.000e+0	74.29	Putative global transcription activator SNF2L1 iso...	[more]
A0A4E0RLR9	0.000e+0	75.00	SWI:SNF matrix associated OS=Fasciola hepatica OX=...	[more]
A0A504YVC4	0.000e+0	74.89	SWI:SNF matrix associated OS=Fasciola gigantica OX...	[more]
A0A5K3ETF1	0.000e+0	71.95	Uncharacterized protein OS=Mesocestoides corti OX=...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
smarca1	0.000e+0	70.59	SWI/SNF-related matrix-associated actin-dependent ...	[more]
smarca1	0.000e+0	70.59	SWI/SNF-related matrix-associated actin-dependent ...	[more]
smarca5	0.000e+0	67.76	SWI/SNF related, matrix associated, actin dependen...	[more]
smarca5	0.000e+0	67.76	SWI/SNF related, matrix associated, actin dependen...	[more]
smarca5	0.000e+0	71.40	SWI/SNF related, matrix associated, actin dependen...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
SMARCA5	0.000e+0	68.57	SWI/SNF related, matrix associated, actin dependen...	[more]
SMARCA5	9.039e-61	70.71	SWI/SNF related, matrix associated, actin dependen...	[more]
ENSPMAT00000004254.1	4.454e-134	43.26	pep scaffold:Pmarinus_7.0:GL484668:1435:12215:1 ge...	[more]
SMARCA2	5.863e-131	45.58	SWI/SNF related, matrix associated, actin dependen...	[more]
ENSPMAT00000008242.1	1.211e-122	63.47	pep scaffold:Pmarinus_7.0:GL480216:41002:47501:-1 ...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
ISW2	0.000e+0	49.95	ATP-dependent DNA translocase involved in chromati...	[more]
ISW1	0.000e+0	48.19	ATPase subunit of imitation-switch (ISWI) class ch...	[more]
CHD1	7.094e-141	43.44	Chromatin remodeler that regulates various aspects...	[more]
SNF2	8.771e-134	41.36	Catalytic subunit of the SWI/SNF chromatin remodel...	[more]
STH1	2.881e-132	47.57	ATPase component of the RSC chromatin remodeling c...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO40761	0.000e+0	67.89	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO39585	2.416e-132	43.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48116	3.020e-130	45.51	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO31943	1.072e-125	40.98	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47298	7.643e-125	43.01	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of SWI:SNF matrix associated vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
smarca5	0.000e+0	67.87	SWI/SNF related, matrix associated, actin dependen...	[more]
chd1l	5.910e-138	42.68	chromodomain helicase DNA binding protein 1 like [...	[more]
ENSORLT00000004949.2	2.603e-135	45.02	transcription activator BRG1 [Source:NCBI gene;Acc...	[more]
chd2	4.239e-134	42.88	chromodomain helicase DNA binding protein 2 [Sourc...	[more]
chd2	5.652e-134	42.88	chromodomain helicase DNA binding protein 2 [Sourc...	[more]

BLAST of SWI:SNF matrix associated vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000013560.1	0.000e+0	99.59	SMESG000013560.1	[more]
SMESG000017699.1	0.000e+0	68.86	SMESG000017699.1	[more]
SMESG000017699.1	0.000e+0	68.86	SMESG000017699.1	[more]
SMESG000017689.1	0.000e+0	69.20	SMESG000017689.1	[more]
SMESG000017691.1	0.000e+0	71.75	SMESG000017691.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30013475 ID=SMED30013475|Name=SWI:SNF matrix associated|organism=Schmidtea mediterranea sexual|type=transcript|length=3208bp
CTTCACTGACAAAGAAAAACATTCAAAACATAGTACATTATTGTTTAAAC
GTATTAAACGTATTTCTATTTGACCGCATTATTATAAACGCTATTTTTGT
TTTTGAGTTATTGCAATGGAACCTGTTAAAGAAATAGTTGAATTTGATAA
AAAAAAAACAATTGAATGTATCTTATCTAAAGCAGAACAATTTAGCAAAT
TGAAAGATGGTGGAACAACTCCAAGTAAAAATAAATTCAGTTCTTCAAGT
ATTGGCGACCATCGTCACAGTAAGACCGAACAAGAAGAAGAGGAAGATTT
ATTGACAGAAACTAAGCAAGACGTTATTGTCAATAGATTTGAGCAGTCTC
CGTATTTTGTCATTGGCGGTGAAATGAGAGACTATCAAATTAGAGGATTA
AATTGGCTTATTCAACTATATTTATCTTCAACTAATGGAATATTAGCTGA
TGAAATGGGTCTCGGAAAAACCTTACAAACAATCTCAATGATTGGTTATT
TAAAACACTATCGTAATCTCCCGGGGCCTCATTTAATTATTACTCCGAAA
TCAACTTTACAAAATTGGATCAACGAATTTACTCGTTGGGTGCCGTCTGT
TAAACCAATATGTTTAATAGGCGATCAAGAAACTCGTAGTCGAGTAATAC
GTGAACAGATTTTGCCCCAAGATTGGGATGTAATTGTAACTAGTTATGAA
ATGTGCATTAAAGAAAAGAGTACATTAAAGAAATTTAATTATATATATTT
GGCAATCGATGAAGCTCATAGAATCAAAAACGAAAAGAGTAAATTATCGG
AAATTGTTCGCACTTTCAAATCGCAAAATCGTCTTCTTATTACTGGTACT
CCTTTACAAAACAATCTTCATGAACTATGGGCTCTTTTGAATTTTTTAAT
GCCTGAAATGTTTGCTTCGTCTGCAAATTTCGATGATCTTTTCAATATCA
ATTCTTTGGAGGAAGAAACACTGGTTCAACGTTTACATTCGGTTCTAAAA
CCATTTTTACTCCGAAGAATTAAAGCAGATGTTGAAAAGCGATTACCTCC
AAAAAAAGAAATTAAAATCTATATTGGATTAAGCATATTGCAAAGAGAAT
TATATACGAAAATTTTAATGAAAGATATAGATTTGGTTAACGGAGCTGGG
GGGAAATCAGATAAAGTGCGATTACTTAATATTTTGATGCAGCTTCGGAA
GTGTACAAATCATCCGTATTTGTTTGATGGAATTGAACCGGGACCACCGT
ATACCACAGATTATCATTTAGTAGAAAACTGTGGCAAAATGGTCCTTTTG
GATAAATTACTAAATAAATTGAAAGAACAAGGCTCACGAATTCTTCTTTT
CAGTCAAATGACAAGAATGCTGGATATTTTAGAAGATTATTGTTTATGGA
GGAAATATGATTATTGTCGTCTTGATGGCTCAACGCCACATGATGAAAGA
CAGATTTCTATAGATGAATACAATAAGCCTGGATCAAAAAAGTTTCTTTT
TATGTTATCAACTCGAGCCGGCGGTCTTGGAATCAACTTGGCAACTGCTG
ACGTTGTTATTTTATACGACAGTGATTGGAATCCCCAGGTTGATCTACAA
GCTCAAGACAGGGCTCATAGAATCGGTCAGACGAAAACCGTTCGTGTTTT
TCGTTTGATTACCGAAAATACGGTCGAAGAGCGAATAATTGCTCGCGCTG
AAATGAAACTCAAACTTGATAATATTGTTATTCAACAGGGACGACTTGTA
GAGCAGAAAAATAATCAATTAGGGAAAAATGAAATTTTGGATATGATTAA
ATATGGAGCTAATTATATATTCCGATCTAAAGACACCGACATTAGAGATG
AGGATATTGATGTTCTGCTTGCTAGAGGAGAACAAAAAACTGCTGAAATG
AACAAAAAATTAGATGAGCTCGGTGAGTCTAACTTACGCCAACTTAAATT
CGACAATGATGAAAGTGGAGTTTATTCGGTTTATAATTTTGAAGGCGAAG
ATTATCGAGAGAAAGCTGTTTCTAAATTTGACATGGATGGATGGATTCAA
CCTCCGAAAAGAGAACGTAAAGCCAATTATGCAGTTGATCAATACTTCAA
GGATGCATTACGCATCAATGAACCAAAAGCTCCAAAAGCTCCTCGACCAC
CTAAGCAACCAAGTGTTCAGGATTTTCAATTCTTTCCTCCACGCTTGTTT
GAACTGCTAGATAAAGAAATTTATGCATTTAGAAAAAGTATAGGCTATGT
TGTTCCTAAGTGTGACTCTGCCACTCCGGAAGCTGAATTGGAAAGAATTG
AAGAACAAAATAAAATATTTGAAGCAGAATCATTAACCGAAGCTGAAATG
GCGGAAAGAGAAGAACTATTAGTTCAAGGATTTACTACTTGGACCAAAAG
AGATTTCCAGCAGTTTATAAAAGCCAATGAAAAATATGGTCGAGATGACA
TTGAATCCATTTCAGGCGATGTCGAAGGAAAAACTCCAGAAGAAGTAAAG
AAATATTCTCGTGTTTTTTGGAGTCGTTGCAACGAGTTACAAGATGTGGA
AAAATATCTCTCGCAGATTGAACGAGGAGAAGCTAAAATTCAACGCAGAG
TAGCTATAAAACGAGCTTTGGATTTAAAAATGGCTCGATATAGGGCTCCT
TTTCATCAACTTCGAATACAATATGGAACAAATAAAGGAAAAAATTACAC
AGAAGAAGAAGATAGGTTTTTGATTTGTATGCTTCATAAATTAGGATTCG
ACAAGGACAATGTTTATGATAATTTGAGATTGGCTGTTCGATTAGCTCCT
CAATTTCGTTTTGATTGGTTTATACGCTCTCGAACTGCTATAGAACTTCA
GCGTCGCTGTTCAACACTCATTACATTGATCGAAAGGGAAATCTGTGATC
TGGAGGAAAAAAGTCGCAAATCGAAAGGTGGAAATCACGCACCAGAATCG
TCTGGCGGCCAACTCGTGTCTAAAAATAGTGGAAGTCATACTTCGAAGCA
TAAAGCTGGAGAAGATGAATTGTCGGTTCCAAATAAAAAAAAGAAAAGTG
TCTGATATATGTTTTCAATTTTTAAAGCATTTATTCTCTATTTTTACTGT
AACATTTGTAAATTAAATTCATATTATCTTGGTCTTTTTTAAATAGTTTA
TAAATTATTTCAATTCAAATGTGTAATGTTTTTTTAATATAAAATTCTGA
GAATTAAA

protein sequence of SMED30013475-orf-1

>SMED30013475-orf-1 ID=SMED30013475-orf-1|Name=SMED30013475-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=980bp
MEPVKEIVEFDKKKTIECILSKAEQFSKLKDGGTTPSKNKFSSSSIGDHR
HSKTEQEEEEDLLTETKQDVIVNRFEQSPYFVIGGEMRDYQIRGLNWLIQ
LYLSSTNGILADEMGLGKTLQTISMIGYLKHYRNLPGPHLIITPKSTLQN
WINEFTRWVPSVKPICLIGDQETRSRVIREQILPQDWDVIVTSYEMCIKE
KSTLKKFNYIYLAIDEAHRIKNEKSKLSEIVRTFKSQNRLLITGTPLQNN
LHELWALLNFLMPEMFASSANFDDLFNINSLEEETLVQRLHSVLKPFLLR
RIKADVEKRLPPKKEIKIYIGLSILQRELYTKILMKDIDLVNGAGGKSDK
VRLLNILMQLRKCTNHPYLFDGIEPGPPYTTDYHLVENCGKMVLLDKLLN
KLKEQGSRILLFSQMTRMLDILEDYCLWRKYDYCRLDGSTPHDERQISID
EYNKPGSKKFLFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRA
HRIGQTKTVRVFRLITENTVEERIIARAEMKLKLDNIVIQQGRLVEQKNN
QLGKNEILDMIKYGANYIFRSKDTDIRDEDIDVLLARGEQKTAEMNKKLD
ELGESNLRQLKFDNDESGVYSVYNFEGEDYREKAVSKFDMDGWIQPPKRE
RKANYAVDQYFKDALRINEPKAPKAPRPPKQPSVQDFQFFPPRLFELLDK
EIYAFRKSIGYVVPKCDSATPEAELERIEEQNKIFEAESLTEAEMAEREE
LLVQGFTTWTKRDFQQFIKANEKYGRDDIESISGDVEGKTPEEVKKYSRV
FWSRCNELQDVEKYLSQIERGEAKIQRRVAIKRALDLKMARYRAPFHQLR
IQYGTNKGKNYTEEEDRFLICMLHKLGFDKDNVYDNLRLAVRLAPQFRFD
WFIRSRTAIELQRRCSTLITLIEREICDLEEKSRKSKGGNHAPESSGGQL
VSKNSGSHTSKHKAGEDELSVPNKKKKSV*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000099	neuron
PLANA:0000429	neoblast
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR038718	SNF2-like_sf
IPR036306	ISWI_HAND-dom_sf
IPR029915	ISWI_metazoa
IPR001005	SANT/Myb
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C
IPR027417	P-loop_NTPase
IPR009057	Homeobox-like_sf
IPR015195	SLIDE
IPR000330	SNF2_N
IPR015194	ISWI_HAND-dom
IPR017884	SANT_dom

Vocabulary: **molecular function**
Term	Definition
GO:0003677	DNA binding
GO:0003676	nucleic acid binding
GO:0005524	ATP binding
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0031491	nucleosome binding
GO:0008324	cation transmembrane transporter activity
GO:0016887	ATPase activity

Vocabulary: **biological process**
Term	Definition
GO:0006338	chromatin remodeling
GO:0043044	ATP-dependent chromatin remodeling
GO:0006812	cation transport
GO:0055085	transmembrane transport
GO:0098655	cation transmembrane transport

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus
GO:0016020	membrane
GO:0016021	integral component of membrane
GO:0016589	NURF complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 755..804 e-value: 3.6E-6 score: 36.5 coord: 857..921 e-value: 0.0055 score: 25.9
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 758..797 e-value: 7.17491E-7 score: 44.4886
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 83..279 e-value: 6.2E-38 score: 142.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 99..264 score: 24.706
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 420..504 e-value: 7.1E-24 score: 95.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 392..504 e-value: 1.2E-18 score: 67.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 394..545 score: 19.935
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 755..809 e-value: 2.0E-24 score: 87.6
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 843..948 e-value: 1.1E-42 score: 146.2
None	No IPR available	GENE3D	G3DSA:1.20.5.1190		coord: 810..842 e-value: 1.2E-15 score: 59.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 307..604 e-value: 4.9E-123 score: 412.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 932..979
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 959..979
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 940..958
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 34..920
None	No IPR available	CDD	cd18793	SF2_C_SNF	coord: 389..515 e-value: 7.61581E-53 score: 178.824
None	No IPR available	CDD	cd17997	DEXHc_SMARCA1_SMARCA5	coord: 84..303 e-value: 3.95656E-135 score: 402.856
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	G3DSA:3.40.50.10810		coord: 88..302 e-value: 7.8E-70 score: 236.2
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 102..369 e-value: 1.5E-71 score: 241.0
IPR015194	ISWI, HAND domain	PFAM	PF09110	HAND	coord: 656..755 e-value: 4.8E-28 score: 98.1
IPR015195	SLIDE domain	PFAM	PF09111	SLIDE	coord: 812..925 e-value: 3.2E-40 score: 136.7
IPR036306	ISWI, HAND domain superfamily	GENE3D	G3DSA:1.10.1040.30		coord: 647..754 e-value: 4.3E-39 score: 135.5
IPR036306	ISWI, HAND domain superfamily	SUPERFAMILY	SSF101224	HAND domain of the nucleosome remodeling ATPase ISWI	coord: 657..757
IPR029915	ISWI family, metazoa	PANTHER	PTHR10799:SF819	GLOBAL TRANSCRIPTION ACTIVATOR SNF2L1-RELATED	coord: 34..920
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 754..806 score: 17.856
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 759..808
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 810..935
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 303..586
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 70..301