Mitochondrial ATP synthase subunit 9

Overview


Name	Mitochondrial ATP synthase subunit 9
Smed ID	SMED30013300
Length (bp)	471

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Mitochondrial ATP synthase subunit 9 (SMED30013300) t-SNE clustered cells

Violin plots show distribution of expression levels for Mitochondrial ATP synthase subunit 9 (SMED30013300) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Mitochondrial ATP synthase subunit 9 (SMED30013300) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Mitochondrial ATP synthase subunit 9 (SMED30013300) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30013300

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Expressed In	Reference Transcript	Published Transcript	Transcriptome	Publication
X2 cell	SMED30013300	SmedASXL_066262	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
pharynx	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30013300	Contig21613	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30013300	Contig21613	newmark_ests	PMID:29674431 Fincher et al., 2018
body wall musculature	SMED30013300	dd_Smed_v4_23_0_1	dd_Smed_v4	PMID:30471994 Scimone et al., 2018
neoblast	SMED30013300	dd_Smed_v6_23_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Match: ATP5MC2 (ATP synthase membrane subunit c locus 2 [Source:HGNC Symbol;Acc:HGNC:842])

HSP 1 Score: 93.9745 bits (232), Expect = 9.597e-25
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 VSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 VSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 VSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 VSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Match: ATP5MC2 (ATP synthase membrane subunit c locus 2 [Source:HGNC Symbol;Acc:HGNC:842])

HSP 1 Score: 93.9745 bits (232), Expect = 1.679e-24
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   70 VSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 156

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Celegans
Match: Y82E9BR.3 (ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0])

HSP 1 Score: 87.8113 bits (216), Expect = 6.426e-23
Identity = 69/88 (78.41%), Postives = 73/88 (82.95%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V +  I T+    DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:   29 VAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V +  I T+    DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:   29 VAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V +  I T+    DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:   29 VAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V +  I T+    DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:   29 VAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0085774)

HSP 1 Score: 93.9745 bits (232), Expect = 4.728e-25
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 1

Query:  100 VSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V+ +P + S    TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   47 VALLPQIRS--FQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0085773)

HSP 1 Score: 93.9745 bits (232), Expect = 4.728e-25
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 1

Query:  100 VSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V+ +P + S    TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   47 VALLPQIRS--FQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0305121)

HSP 1 Score: 93.9745 bits (232), Expect = 4.728e-25
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 1

Query:  100 VSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V+ +P + S    TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   47 VALLPQIRS--FQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0085772)

HSP 1 Score: 93.9745 bits (232), Expect = 4.728e-25
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 1

Query:  100 VSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V+ +P + S    TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   47 VALLPQIRS--FQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0306237)

HSP 1 Score: 93.9745 bits (232), Expect = 4.728e-25
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 1

Query:  100 VSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V+ +P + S    TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   47 VALLPQIRS--FQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Match: atp5mc3b (ATP synthase membrane subunit c locus 3b [Source:ZFIN;Acc:ZDB-GENE-020814-1])

HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-24
Identity = 77/112 (68.75%), Postives = 85/112 (75.89%), Query Frame = 1

Query:   58 SVLSLRNVYGCVIKVSSIPPVNSNYI-----HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            SVLS  +V       + +P    + +      TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   28 SVLSRPDVSSAEASPAFLPQTAGSQVAVRGFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

Query:   58 SVLSLRNVYGCVIKVSSIPPVNSNYI-----HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            SVLS  +V       + +P    + +      TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   28 SVLSRPDVSSAEASPAFLPQTAGSQVAVRGFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Match: atp5mc3a (ATP synthase membrane subunit c locus 3a [Source:ZFIN;Acc:ZDB-GENE-040426-857])

HSP 1 Score: 92.0485 bits (227), Expect = 3.794e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   58 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   58 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Match: atp5mc1 (ATP synthase membrane subunit c locus 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1966])

HSP 1 Score: 90.8929 bits (224), Expect = 1.161e-23
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 1

Query:   73 RNVYGCVIKVSSIPPVN-SNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            R+    ++ VS    +N +    TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   35 RSEQAALLPVSEAALLNLTRGFQTSVASRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 137

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 95.1301 bits (235), Expect = 2.707e-25
Identity = 83/125 (66.40%), Postives = 91/125 (72.80%), Query Frame = 1

Query:   37 NCFVIRR----SVLS---LRNVYGCVIKVSSIPPVNSNYI----HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            NC V+ R    SVLS   +R   G    +S  P   +  +     TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:    6 NCLVLYRPVSASVLSRPEVRTGEGNATLLSGTPNTFTQLVLREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 130

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc1 (ATP synthase membrane subunit c locus 1 [Source:NCBI gene;Acc:448692])

HSP 1 Score: 93.9745 bits (232), Expect = 8.666e-25
Identity = 72/95 (75.79%), Postives = 80/95 (84.21%), Query Frame = 1

Query:   94 IKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            ++   + PV +  I +S    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   39 LRTEQLMPVPARGIQSSVTCRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 133

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc1 (ATP synthase membrane subunit c locus 1 [Source:NCBI gene;Acc:448692])

HSP 1 Score: 94.3597 bits (233), Expect = 1.532e-24
Identity = 72/95 (75.79%), Postives = 80/95 (84.21%), Query Frame = 1

Query:   94 IKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            ++   + PV +  I +S    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   75 LRTEQLMPVPARGIQSSVTCRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 169

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 92.8189 bits (229), Expect = 2.541e-24
Identity = 79/117 (67.52%), Postives = 87/117 (74.36%), Query Frame = 1

Query:   49 IRRSVLS---LRNVYGCVIKVSSIPPVNSNYI----HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            +  SVLS   +R   G    +S  P   +  +     TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   18 VSASVLSRPEVRTGEGNATLLSGTPNTFTQLVLREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 134

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 92.0485 bits (227), Expect = 4.047e-24
Identity = 79/117 (67.52%), Postives = 87/117 (74.36%), Query Frame = 1

Query:   49 IRRSVLS---LRNVYGCVIKVSSIPPVNSNYI----HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            +  SVLS   +R   G    +S  P   +  +     TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   16 VSASVLSRPEVRTGEGNATLLSGTPNTFTQLVLREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 132

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
Match: Atp5g2 (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) [Source:MGI Symbol;Acc:MGI:1915192])

HSP 1 Score: 92.8189 bits (229), Expect = 2.494e-24
Identity = 72/87 (82.76%), Postives = 76/87 (87.36%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            + S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   59 IPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 145

[Close]

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            + S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   59 IPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 145

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
Match: Atp5g1 (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) [Source:MGI Symbol;Acc:MGI:107653])

HSP 1 Score: 90.5077 bits (223), Expect = 1.716e-23
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1

Query:  241 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   90 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

Query:  241 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   90 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

Query:  241 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   90 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q06646|AT5G2_RAT (ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.436e-24
Identity = 77/115 (66.96%), Postives = 85/115 (73.91%), Query Frame = 1

Query:   34 MNCFVIRRSVLSLRNVYGCVIKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            ++C  +RR + SL               + S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   41 LSCLAVRRPLTSL---------------IPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q9U505|AT5G_MANSE (ATP synthase lipid-binding protein, mitochondrial OS=Manduca sexta OX=7130 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.027e-24
Identity = 70/82 (85.37%), Postives = 75/82 (91.46%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
             T++   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   50 QTTSVTKDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 131

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q06055|AT5G2_HUMAN (ATP synthase F(0) complex subunit C2, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5MC2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.609e-24
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 VSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q5RAP9|AT5G2_PONAB (ATP synthase F(0) complex subunit C2, mitochondrial OS=Pongo abelii OX=9601 GN=ATP5MC2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.909e-24
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V+S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 VSSRNFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q06056|AT5G2_SHEEP (ATP synthase F(0) complex subunit C2, mitochondrial OS=Ovis aries OX=9940 GN=ATP5MC2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.702e-23
Identity = 74/93 (79.57%), Postives = 79/93 (84.95%), Query Frame = 1

Query:  100 VSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             +S+ P  S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   52 TTSLTP--SRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A4S2KKD1 (ATP-synt_C domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010871 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.991e-26
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1

Query:   55 RSVLSLRNVYGCV--------IKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            ++ L+LR V+  +        I V+  PP+ ++  HTS    DIDQAAKYIGAGAAT G AGSGAGIG+VFG+LVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    8 QTRLALRPVFSTILRGQPLKCIPVAVAPPLQTSQFHTSLVRRDIDQAAKYIGAGAATVGAAGSGAGIGSVFGNLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 124

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A0X3NS56 (ATP synthase F(0) complex subunit C3 OS=Schistocephalus solidus OX=70667 GN=AT5G3 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.095e-25
Identity = 83/122 (68.03%), Postives = 98/122 (80.33%), Query Frame = 1

Query:   25 SYMMNCFVIRRSVLSLRNVYGCV---IKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            ++++   VI R ++S R V   +   I  S++  V+S  IHT+    DIDQAAKYIGAGAAT GVAGSGAGIG+VFG+LV+GYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    5 THILKSSVIVRPLIS-RTVLNSMLPKIGQSTLFDVSSKNIHTTVIHRDIDQAAKYIGAGAATVGVAGSGAGIGSVFGNLVMGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 125

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A267EQX1 (ATP-synt_C domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig000661g1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.095e-25
Identity = 76/95 (80.00%), Postives = 83/95 (87.37%), Query Frame = 1

Query:   97 KVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            ++++  PV S  +H SA   DIDQAAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:   24 RLAAASPVLSRQLHASAARRDIDQAAKYIGAGAATVGVAGSGAGIGNVFGNLVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 118

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A3P7NU32 (ATP-synt_C domain-containing protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS19391 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.156e-25
Identity = 81/121 (66.94%), Postives = 98/121 (80.99%), Query Frame = 1

Query:   25 SYMMNCFVIRRSVLSLRNVYGCVIKV--SSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            ++++   V+ R ++S   V   + K+  S++  V+S  IHT+    DIDQAAKYIGAGAAT GVAGSGAGIG+VFG+LV+GYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    5 AHILKSSVMVRPLISRTLVNSMLPKIGQSTLFDVSSKSIHTTVVRRDIDQAAKYIGAGAATVGVAGSGAGIGSVFGNLVMGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 125

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: C1BTS9 (ATP synthase lipid-binding protein, mitochondrial OS=Lepeophtheirus salmonis OX=72036 GN=AT5G3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.887e-25
Identity = 77/111 (69.37%), Postives = 88/111 (79.28%), Query Frame = 1

Query:   49 IRRSVLSLRNVYGCVIKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            + RS LS       + + ++  P+ +  I TS+   DID AAK+IGAGAAT GVAGSGAGIG+VFGSLVIGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   12 VSRSTLSGVRCQYALARQNAWTPIAARAIQTSSVKSDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 122

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: atp5mc1 (ATP synthase F(0) complex subunit C2, mitochondrial [Source:NCBI gene;Acc:103043029])

HSP 1 Score: 92.8189 bits (229), Expect = 1.775e-24
Identity = 76/103 (73.79%), Postives = 82/103 (79.61%), Query Frame = 1

Query:   73 RNVYGCVIKVSSIPPVN-SNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            R     ++ VS    +N S    TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   36 RTEQAALLPVSEASLLNVSRSFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: atp5mc3b (ATP synthase F(0) complex subunit C2, mitochondrial-like [Source:NCBI gene;Acc:103042584])

HSP 1 Score: 91.6633 bits (226), Expect = 3.574e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 129

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: ENSAMXT00000036927.1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:103027531])

HSP 1 Score: 91.6633 bits (226), Expect = 5.511e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   60 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: ENSAMXT00000049606.1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:103027531])

HSP 1 Score: 91.2781 bits (225), Expect = 5.518e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   58 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: atp5mc3b (ATP synthase F(0) complex subunit C2, mitochondrial-like [Source:NCBI gene;Acc:103042584])

HSP 1 Score: 91.2781 bits (225), Expect = 6.881e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   59 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: atp5mc3a (ATP synthase membrane subunit c locus 3a [Source:ZFIN;Acc:ZDB-GENE-040426-857])

HSP 1 Score: 91.6633 bits (226), Expect = 3.121e-25
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   21 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 101

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000839.1 (pep scaffold:Pmarinus_7.0:GL479015:51266:53309:-1 gene:ENSPMAG00000000766.1 transcript:ENSPMAT00000000839.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 91.6633 bits (226), Expect = 1.404e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   70 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 150

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: atp5mc3b (ATP synthase membrane subunit c locus 3b [Source:ZFIN;Acc:ZDB-GENE-020814-1])

HSP 1 Score: 90.5077 bits (223), Expect = 2.877e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   59 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: atp5mc3b (ATP synthase membrane subunit c locus 3b [Source:ZFIN;Acc:ZDB-GENE-020814-1])

HSP 1 Score: 90.1225 bits (222), Expect = 5.016e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   76 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 156

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Yeast
Match: OLI1 (F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2 [Source:SGD;Acc:S000007274])

HSP 1 Score: 59.6918 bits (143), Expect = 2.823e-13
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 1

Query:  241 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            F +L+ G +RNP +K  +F  AILGFALSEA GLFCLM++FL+LF 
Sbjct:   30 FAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFG 75

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Nematostella
Match: EDO42877 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S000])

HSP 1 Score: 93.5893 bits (231), Expect = 2.617e-25
Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 1

Query:  124 SNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            S    TS+ + D+D AAK+IGAGAAT G AGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFLILFA
Sbjct:   50 SRGFQTSSAVQDVDSAAKFIGAGAATVGAAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 134

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:101156015])

HSP 1 Score: 92.4337 bits (228), Expect = 1.666e-24
Identity = 72/85 (84.71%), Postives = 76/85 (89.41%), Query Frame = 1

Query:  124 SNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            S  + TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   47 SRSLQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 131

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc3b (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:101163447])

HSP 1 Score: 92.4337 bits (228), Expect = 2.143e-24
Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 1

Query:   88 CVIKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             V+  S +  V      TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   42 AVMPQSPLTQVTLRGFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: ATP5MC2 (ATP synthase F(0) complex subunit C2, mitochondrial [Source:NCBI gene;Acc:101173375])

HSP 1 Score: 92.4337 bits (228), Expect = 2.686e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1

Query:  136 HTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   60 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc3b (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:101163447])

HSP 1 Score: 92.0485 bits (227), Expect = 3.480e-24
Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 1

Query:   88 CVIKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
             V+  S +  V      TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   51 AVMPQSPLTQVTLRGFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 147

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:101156015])

HSP 1 Score: 92.0485 bits (227), Expect = 1.784e-23
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 1

Query:  118 VNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 378
            V S  + TSA   DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:  128 VLSRSLQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 214

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST
Match: SMESG000078181.1 (SMESG000078181.1)

HSP 1 Score: 179.104 bits (453), Expect = 7.417e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1

Query:   34 MNCFVIRRSVLSLRNVYGCVIKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            MNCFVIRRSVLSLRNVYGCVIKVSSIPPVNSNYIHTSARICDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF
Sbjct:    1 MNCFVIRRSVLSLRNVYGCVIKVSSIPPVNSNYIHTSARICDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 116

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST
Match: SMESG000059768.1 (SMESG000059768.1)

HSP 1 Score: 102.834 bits (255), Expect = 6.329e-29
Identity = 81/97 (83.51%), Postives = 84/97 (86.60%), Query Frame = 1

Query:   91 VIKVSSIPPVNSNYIHTSARICDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 381
            V K+S +  +     HTS    DIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF
Sbjct:    9 VQKLSPLANIKDCKFHTSTVRNDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 105

The following BLAST results are available for this feature:

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Celegans
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Yeast
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Nematostella
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ATP5MC2	9.597e-25	83.91	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]
ATP5MC2	9.597e-25	83.91	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]
ATP5MC2	9.597e-25	83.91	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]
ATP5MC2	9.597e-25	83.91	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]
ATP5MC2	1.679e-24	83.91	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4


Match Name	E-value	Identity	Description
Y82E9BR.3	6.426e-23	78.41	ATP synthase lipid-binding protein, mitochondrial ...	[more]
Y82E9BR.3	6.426e-23	78.41	ATP synthase lipid-binding protein, mitochondrial ...	[more]
Y82E9BR.3	6.426e-23	78.41	ATP synthase lipid-binding protein, mitochondrial ...	[more]
Y82E9BR.3	6.426e-23	78.41	ATP synthase lipid-binding protein, mitochondrial ...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ATPsynC	4.728e-25	78.72	gene:FBgn0039830 transcript:FBtr0085774	[more]
ATPsynC	4.728e-25	78.72	gene:FBgn0039830 transcript:FBtr0085773	[more]
ATPsynC	4.728e-25	78.72	gene:FBgn0039830 transcript:FBtr0305121	[more]
ATPsynC	4.728e-25	78.72	gene:FBgn0039830 transcript:FBtr0085772	[more]
ATPsynC	4.728e-25	78.72	gene:FBgn0039830 transcript:FBtr0306237	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc3b	3.039e-24	68.75	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
atp5mc3b	3.039e-24	68.75	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
atp5mc3a	3.794e-24	87.65	ATP synthase membrane subunit c locus 3a [Source:Z...	[more]
atp5mc3a	3.794e-24	87.65	ATP synthase membrane subunit c locus 3a [Source:Z...	[more]
atp5mc1	1.161e-23	71.84	ATP synthase membrane subunit c locus 1 [Source:ZF...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc3	2.707e-25	66.40	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc1	8.666e-25	75.79	ATP synthase membrane subunit c locus 1 [Source:NC...	[more]
atp5mc1	1.532e-24	75.79	ATP synthase membrane subunit c locus 1 [Source:NC...	[more]
atp5mc3	2.541e-24	67.52	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc3	4.047e-24	67.52	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Atp5g2	2.494e-24	82.76	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g2	2.494e-24	82.76	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g1	1.716e-23	93.48	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g1	1.716e-23	93.48	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g1	1.716e-23	93.48	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q06646\|AT5G2_RAT	2.436e-24	66.96	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
sp\|Q9U505\|AT5G_MANSE	3.027e-24	85.37	ATP synthase lipid-binding protein, mitochondrial ...	[more]
sp\|Q06055\|AT5G2_HUMAN	4.609e-24	83.91	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
sp\|Q5RAP9\|AT5G2_PONAB	5.909e-24	83.91	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
sp\|Q06056\|AT5G2_SHEEP	1.702e-23	79.57	ATP synthase F(0) complex subunit C2, mitochondria...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4S2KKD1	1.991e-26	69.23	ATP-synt_C domain-containing protein OS=Opisthorch...	[more]
A0A0X3NS56	3.095e-25	68.03	ATP synthase F(0) complex subunit C3 OS=Schistocep...	[more]
A0A267EQX1	4.095e-25	80.00	ATP-synt_C domain-containing protein OS=Macrostomu...	[more]
A0A3P7NU32	5.156e-25	66.94	ATP-synt_C domain-containing protein OS=Dibothrioc...	[more]
C1BTS9	5.887e-25	69.37	ATP synthase lipid-binding protein, mitochondrial ...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc1	1.775e-24	73.79	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
atp5mc3b	3.574e-24	87.65	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
ENSAMXT00000036927.1	5.511e-24	87.65	ATP synthase F(0) complex subunit C3, mitochondria...	[more]
ENSAMXT00000049606.1	5.518e-24	87.65	ATP synthase F(0) complex subunit C3, mitochondria...	[more]
atp5mc3b	6.881e-24	87.65	ATP synthase F(0) complex subunit C2, mitochondria...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4


Match Name	E-value	Identity	Description
atp5mc3a	3.121e-25	87.65	ATP synthase membrane subunit c locus 3a [Source:Z...	[more]
ENSPMAT00000000839.1	1.404e-24	87.65	pep scaffold:Pmarinus_7.0:GL479015:51266:53309:-1 ...	[more]
atp5mc3b	2.877e-24	87.65	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
atp5mc3b	5.016e-24	87.65	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
OLI1	2.823e-13	60.87	F0-ATP synthase subunit c (ATPase-associated prote...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO42877	2.617e-25	82.35	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc1	1.666e-24	84.71	ATP synthase F(0) complex subunit C3, mitochondria...	[more]
atp5mc3b	2.143e-24	76.29	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
ATP5MC2	2.686e-24	87.65	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
atp5mc3b	3.480e-24	76.29	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc1	1.784e-23	83.91	ATP synthase F(0) complex subunit C3, mitochondria...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2


Match Name	E-value	Identity	Description
SMESG000078181.1	7.417e-59	100.00	SMESG000078181.1	[more]
SMESG000059768.1	6.329e-29	83.51	SMESG000059768.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30013300 ID=SMED30013300|Name=Mitochondrial ATP synthase subunit 9|organism=Schmidtea mediterranea sexual|type=transcript|length=471bp
CGGTCTTATCGAAATCTATATAAATCTTATATGATGAATTGCTTTGTAAT
TCGTAGGAGTGTGCTGTCGCTTAGAAATGTATACGGATGTGTAATTAAGG
TATCTTCTATACCTCCTGTCAACAGCAATTATATTCACACTAGTGCTAGA
ATATGTGATATTGATCAAGCAGCAAAATATATTGGAGCTGGAGCAGCTAC
TGCCGGTGTAGCGGGTTCAGGAGCTGGAATTGGTACTGTTTTTGGTAGTT
TAGTTATTGGTTATGCAAGAAACCCTGGATTAAAGCAGCAATTATTTTCA
TATGCTATTTTAGGTTTCGCTTTAAGTGAGGCTATGGGGTTATTTTGTTT
GATGATGGCATTTTTAATTCTTTTTGCTTTCTGAAAAATTGTATTTAGAT
TTGATATTAGTTAAACATTAGGGATGTATTTTCTGAATTTTGATAGCTCA
AATACACAAAGGATAATGGAG

protein sequence of SMED30013300-orf-1

>SMED30013300-orf-1 ID=SMED30013300-orf-1|Name=SMED30013300-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=128bp
RSYRNLYKSYMMNCFVIRRSVLSLRNVYGCVIKVSSIPPVNSNYIHTSAR
ICDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFS
YAILGFALSEAMGLFCLMMAFLILFAF*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **biological process**
Term	Definition
GO:1902600	hydrogen ion transmembrane transport
GO:0015986	ATP synthesis coupled proton transport
GO:0015991	ATP hydrolysis coupled proton transport
GO:0006810	transport
GO:0006811	ion transport
GO:0015992	proton transport

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000240	body wall musculature
PLANA:0000429	neoblast
PLANA:0002032	epidermal cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR038662	ATP_synth_F0_csu_sf
IPR035921	F/V-ATP_Csub_sf
IPR000454	ATP_synth_F0_csu
IPR002379	ATPase_proteolipid_c-like_dom
IPR020537	ATP_synth_F0_csu_DDCD_BS

Vocabulary: **cellular component**
Term	Definition
GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0016020	membrane
GO:0016021	integral component of membrane

Vocabulary: **molecular function**
Term	Definition
GO:0015078	hydrogen ion transmembrane transporter activity
GO:0008289	lipid binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000454	ATP synthase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 88..113 score: 58.41 coord: 50..69 score: 53.63 coord: 71..86 score: 46.32
IPR000454	ATP synthase, F0 complex, subunit C	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 34..115
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	G3DSA:1.20.20.10		coord: 43..114 e-value: 1.6E-36 score: 126.2
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 50..112 e-value: 2.9E-10 score: 40.3
None	No IPR available	PANTHER	PTHR10031:SF31	ATP SYNTHASE F(0) COMPLEX SUBUNIT C1, MITOCHONDRIAL	coord: 34..115
None	No IPR available	CDD	cd18182	ATP-synt_Fo_c_ATP5G3	coord: 68..112 e-value: 1.12994E-20 score: 76.7795
None	No IPR available	TMHMM	TMhelix		coord: 55..77
None	No IPR available	TMHMM	TMhelix		coord: 92..114
IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 78..99
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	SSF81333	F1F0 ATP synthase subunit C	coord: 44..115