Gamma-aminobutyric acid receptor subunit beta A
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30013129 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Human
Match: GABRB1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:HGNC Symbol;Acc:HGNC:4081]) HSP 1 Score: 353.214 bits (905), Expect = 6.367e-115 Identity = 214/504 (42.46%), Postives = 301/504 (59.72%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENS--ERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMST-STENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
HS+NE + T+ L+K YD RLRP FG P+ + M + VAS D +SEVNMDYT+T+Y Q W+D+RL++ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W G AV + I + QF+IV+Y + + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTIST +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G+ ++K ++ S E++++ K+ + H + R N S + + P K ++Y+ S AS YRK P+S+ R + ++ PSK R +R + K K + + D+ IDK+SR+ FPI+F LFN+ Y+ Y
Sbjct: 26 HSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNKLEMNKVQ-----------------VDAHGNILLSTLEIR--NETSGSEVLTSVSDP----KATMYSYDS-------ASIQYRK--------------------PLSSREAYGRALDRHGVPSKGR----IRRRASQLKVK-IPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Human
Match: GABRB2 (gamma-aminobutyric acid type A receptor beta2 subunit [Source:HGNC Symbol;Acc:HGNC:4082]) HSP 1 Score: 348.591 bits (893), Expect = 4.158e-113 Identity = 217/526 (41.25%), Postives = 302/526 (57.41%), Query Frame = 3
Query: 294 FWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
W+F I +C S N+ + T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL++NV + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ NAV + I + QF+IV+Y + T STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G + K +K N+E+ R++ K+ EN + E ++A+ DP R Y +S+ R+ R H FGR + R + Q +K R S L+ + + D+ ID++SRI FP+ F FNI Y+ Y
Sbjct: 12 IWSFPLIIAAVCA--------QSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDP---HENILLSTLEIKNEMATSEAVM---GLGDP-----------------RSTMLAYDASSIQYRKAGLPR------HSFGR-----------------NALERHVAQ-KKSRLRRRASQLKI--------TIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Human
Match: GABRB2 (gamma-aminobutyric acid type A receptor beta2 subunit [Source:HGNC Symbol;Acc:HGNC:4082]) HSP 1 Score: 348.591 bits (893), Expect = 4.158e-113 Identity = 217/526 (41.25%), Postives = 302/526 (57.41%), Query Frame = 3
Query: 294 FWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
W+F I +C S N+ + T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL++NV + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ NAV + I + QF+IV+Y + T STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G + K +K N+E+ R++ K+ EN + E ++A+ DP R Y +S+ R+ R H FGR + R + Q +K R S L+ + + D+ ID++SRI FP+ F FNI Y+ Y
Sbjct: 12 IWSFPLIIAAVCA--------QSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDP---HENILLSTLEIKNEMATSEAVM---GLGDP-----------------RSTMLAYDASSIQYRKAGLPR------HSFGR-----------------NALERHVAQ-KKSRLRRRASQLKI--------TIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 347.436 bits (890), Expect = 1.083e-112 Identity = 221/516 (42.83%), Postives = 309/516 (59.88%), Query Frame = 3
Query: 321 WICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSN---LSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
W SE R S N+ + T+ L+K YD RLRP FG P+ + M + +AS D +SEVNMDYT+T+Y QYW+D+RLA+ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G AV +E I + QF+IV H LVS +TG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q++KK+ E + +++ + +K +E+ D+ H + L S + ++ N + G I +T + F NSGI + + M R + P K ++LR + K K + + D+ ID++SRI+FP +F LFN+ Y+ Y
Sbjct: 16 WTLGTRGSEPR--SVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVE---HRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQRQKKLAEKTAKAKNDRSK------SESNRVDA--------HGNIL----------LTSLE-----VHNEMNEVSGGI-GDTRNSAISFD----------------NSGIQ--YRKQSMPREGHGRFLGDRSLPHKK---THLRRRSSQLKIK-IPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYY 471
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Human
Match: GABRB2 (gamma-aminobutyric acid type A receptor beta2 subunit [Source:HGNC Symbol;Acc:HGNC:4082]) HSP 1 Score: 348.591 bits (893), Expect = 1.104e-112 Identity = 218/533 (40.90%), Postives = 309/533 (57.97%), Query Frame = 3
Query: 294 FWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQ--AIFPKPSCRDPNLYSCQKEFQ-FANSPHNRIKGSIY--ANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENR-EMFQNQKPSKT-REISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
W+F I +C S N+ + T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL++NV + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ NAV + I + QF+IV+Y + T STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G + K +K N+E+ R++ K+ F+ D++ Q +++ P + +F + PH I S N + + R + + S I +P + N E QK S+ R S L+ + + D+ ID++SRI FP+ F FNI Y+ Y
Sbjct: 12 IWSFPLIIAAVCA--------QSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKI-------------FYKDIKQNGTQYRSLWDPTGNLSPTRRTTNYDFSLYTMDPHENILLSTLEIKNEMATSEAVMGLGDPRSTMLAYD---ASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRASQLKI--------TIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 510
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Celegans
Match: gab-1 (Gamma-aminobutyric acid receptor subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O18276]) HSP 1 Score: 382.489 bits (981), Expect = 9.436e-126 Identity = 234/507 (46.15%), Postives = 308/507 (60.75%), Query Frame = 3
Query: 432 RLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXX-------XXXENSERSRINNTK--------------------LSHPIFTEN--KNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
RLRP FG + + M++++ASFDSISEV+MDYT+T+YL+QYW DERL ++ + + G+FS IWVPDTFLANDK+S+LH+VTE+NKMLRI DG++ YGMR ++TL+C M+L +PLD QNCTVEIESYGY +V M W N AVH +E + QFTI + + + +TG YQRLSL FQL R+VG+F+FQTYLP +LIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVR SLPRISYVK+ID+YLV+CFVFVF+ALLEYAAVNY++WG + + S +N K L + T N N++F + K + P CR N S +E + + P Y+ TS+ R AS N++ H GR S + R S + IS + K ++VRD+ +IDK+SR++FP+ FI+FN+ Y+ Y +
Sbjct: 68 RLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKW-NYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYWGRERGKGGGGNEWPVNGANKEDRESAVNVQKWVPSGLMDGVPQPQDRRVEALEEAMSTSNTAAQNNNFESTSKPKKRSSSPIPPLCRAGNTIS--EESESPDYPR-------YSTTSLKGARPHASLNHKTH-HLKGRS--------------SARAKRRMTLARMNVSMKQSISGIGRR--ARKVIPTIRVRDVNLIDKYSRVVFPVCFIVFNLFYWSYYMM 547
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Celegans
Match: lgc-38 (pep chromosome:WBcel235:III:7009136:7019574:1 gene:WBGene00017389.1 transcript:F11H8.2a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgc-38) HSP 1 Score: 258.84 bits (660), Expect = 3.289e-79 Identity = 145/344 (42.15%), Postives = 205/344 (59.59%), Query Frame = 3
Query: 288 WIFWNFL---------------SIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
W+ W+ L + + Q + T SNE L N + + L+ ++D R+RP +G P+ +++ V + ++SEV+MDYT+ LYL Q W+D RLA+ D++ + D IW PDTF N+K SF H+ T N LRI G + +R + T C M LH +PLD Q C +E+ESYGY D+ W +G NAV EN+H+ FTI + +LSTG Y RL+ F RN+GF++ Q Y PS LIV++SWVSFW++ EA ARVA+G+TTVLTMTT+ T +SLP++SYVK++DV+L VCF VF++LLEYAA+ Y
Sbjct: 4 WLLWSLLIGYVTTEHPPLMKSDKLIEYAPQASTEPTLGGESNE-NLENNVTRLLDKLIASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAWESDVEDSLT-IGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHW-HGTNAVTIDENVHLAHFTIGEHKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGY 344
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Celegans
Match: lgc-38 (pep chromosome:WBcel235:III:7009136:7019403:1 gene:WBGene00017389.1 transcript:F11H8.2b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgc-38) HSP 1 Score: 258.455 bits (659), Expect = 7.147e-79 Identity = 145/344 (42.15%), Postives = 205/344 (59.59%), Query Frame = 3
Query: 288 WIFWNFL---------------SIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
W+ W+ L + + Q + T SNE L N + + L+ ++D R+RP +G P+ +++ V + ++SEV+MDYT+ LYL Q W+D RLA+ D++ + D IW PDTF N+K SF H+ T N LRI G + +R + T C M LH +PLD Q C +E+ESYGY D+ W +G NAV EN+H+ FTI + +LSTG Y RL+ F RN+GF++ Q Y PS LIV++SWVSFW++ EA ARVA+G+TTVLTMTT+ T +SLP++SYVK++DV+L VCF VF++LLEYAA+ Y
Sbjct: 4 WLLWSLLIGYVTTEHPPLMKSDKLIEYAPQASTEPTLGGESNE-NLENNVTRLLDKLIASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAWESDVEDSLT-IGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHW-HGTNAVTIDENVHLAHFTIGEHKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGY 344
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Celegans
Match: unc-49 (Ionotropic GABA receptor subunit UNC-49B.3 [Source:UniProtKB/TrEMBL;Acc:G5ECD3]) HSP 1 Score: 249.98 bits (637), Expect = 1.411e-75 Identity = 135/290 (46.55%), Postives = 192/290 (66.21%), Query Frame = 3
Query: 420 NYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFN-----VSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
YD RLRP++G P+ + + + V+S ++SEV+MD+T+ Y+ Q WQD RLAF +S + + D+ +++W PDTF N+K SF H T N LRI GDG ++ R + T C MDL +P+D Q+C +EIESYGY + D+ M + + +V + E+ + QF + + V LS+G Y RL F RN+GF++ Q YLPS+LIV++SWVSFW+S +AT ARVALG+TTVLTMTT+ T SS+P++SYVK+ID++L VCF+ VF +LLEYAAV Y
Sbjct: 46 TYDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDI-MYVSHEKKSV-STESYELPQFVLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGY 333
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Celegans
Match: unc-49 (Ionotropic GABA receptor subunit UNC-49B.3 [Source:UniProtKB/TrEMBL;Acc:G5ECD3]) HSP 1 Score: 249.98 bits (637), Expect = 1.411e-75 Identity = 135/290 (46.55%), Postives = 192/290 (66.21%), Query Frame = 3
Query: 420 NYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFN-----VSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
YD RLRP++G P+ + + + V+S ++SEV+MD+T+ Y+ Q WQD RLAF +S + + D+ +++W PDTF N+K SF H T N LRI GDG ++ R + T C MDL +P+D Q+C +EIESYGY + D+ M + + +V + E+ + QF + + V LS+G Y RL F RN+GF++ Q YLPS+LIV++SWVSFW+S +AT ARVALG+TTVLTMTT+ T SS+P++SYVK+ID++L VCF+ VF +LLEYAAV Y
Sbjct: 46 TYDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDI-MYVSHEKKSV-STESYELPQFVLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGY 333
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Fly
Match: Lcch3 (gene:FBgn0010240 transcript:FBtr0074129) HSP 1 Score: 447.588 bits (1150), Expect = 1.158e-151 Identity = 264/505 (52.28%), Postives = 335/505 (66.34%), Query Frame = 3
Query: 381 LKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNV----------SHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
L+N + TISN+++ YD RLRP FG P+ + M+L +ASFD+ISEVNMDYTIT+YLNQYW+DERLAFN+ ++ + GDF+ +IWVPDTF ANDK SFLHDVTE+NK++R+ GDG + YGMRF+TTLACMMDLHYYPLD QNCTVEIESYGY + DV M WK V +E+ + QFTI+ Y+ + L+TG+YQRLSL F+L RN+G+FVFQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG+RAK+K KK+KE +I ++ S T D+ + + P PS R +N SI T MN +F S R R + +G ++ R Q ++ R + L+ + + K++D+ IIDK+SR++FPISF+ FN+GY+ Y L
Sbjct: 37 LENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP--TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCP-GKIGKSERSETCSTTE--------DIIELQDVRMSPIPSLR--------------RGTYNATLDSIGTET-MNLGKFPPS-------FRITRNYGTG------------HSQLRRRAQRGISTRPRMLHALK-RGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYIL 495
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0333835) HSP 1 Score: 252.292 bits (643), Expect = 5.181e-75 Identity = 127/296 (42.91%), Postives = 190/296 (64.19%), Query Frame = 3
Query: 387 NASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
N S + + +YD R+RP +G P+ + + + V S S+SEV MD+T+ Y Q+W D RLA+ + + +F IWVPDTF N+K S+ H T N+ +R++ G I +R + T +C M+L Y+P+D Q C +EIES+GY + D++ W G N+V + + QF ++ + + +L+TG Y RL+ Q R++G+++ Q Y+PS LIV++SWVSFW++ AT ARVALG+TTVLTMTT+ + ++LP+ISYVK+IDVYL CFV VF++LLEYA V Y
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0076534) HSP 1 Score: 252.292 bits (643), Expect = 5.181e-75 Identity = 127/296 (42.91%), Postives = 190/296 (64.19%), Query Frame = 3
Query: 387 NASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
N S + + +YD R+RP +G P+ + + + V S S+SEV MD+T+ Y Q+W D RLA+ + + +F IWVPDTF N+K S+ H T N+ +R++ G I +R + T +C M+L Y+P+D Q C +EIES+GY + D++ W G N+V + + QF ++ + + +L+TG Y RL+ Q R++G+++ Q Y+PS LIV++SWVSFW++ AT ARVALG+TTVLTMTT+ + ++LP+ISYVK+IDVYL CFV VF++LLEYA V Y
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0309054) HSP 1 Score: 251.136 bits (640), Expect = 6.343e-75 Identity = 127/296 (42.91%), Postives = 191/296 (64.53%), Query Frame = 3
Query: 387 NASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
N S + + +YD R+RP +G P+ + + + V S S+SEV MD+T+ Y Q+W D RLA+ + + +F IWVPDTF N+K S+ H T N+ +R++ G I +R + T +C M+L Y+P+D Q C +EIES+GY + D++ W++G ++V + + QF ++ + NL+TG Y RL+ Q R++G+++ Q Y+PS LIV++SWVSFW++ AT ARVALG+TTVLTMTT+ + ++LP+ISYVK+IDVYL CFV VF++LLEYA V Y
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0333834) HSP 1 Score: 251.521 bits (641), Expect = 1.029e-74 Identity = 127/296 (42.91%), Postives = 190/296 (64.19%), Query Frame = 3
Query: 387 NASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
N S + + +YD R+RP +G P+ + + + V S S+SEV MD+T+ Y Q+W D RLA+ + + +F IWVPDTF N+K S+ H T N+ +R++ G I +R + T +C M+L Y+P+D Q C +EIES+GY + D++ W G N+V + + QF ++ + + +L+TG Y RL+ Q R++G+++ Q Y+PS LIV++SWVSFW++ AT ARVALG+TTVLTMTT+ + ++LP+ISYVK+IDVYL CFV VF++LLEYA V Y
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Zebrafish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:ZFIN;Acc:ZDB-GENE-101102-2]) HSP 1 Score: 363.999 bits (933), Expect = 6.716e-119 Identity = 222/506 (43.87%), Postives = 308/506 (60.87%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKP-SCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQAS----RNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
S+NE + T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G AV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E +E++ NND +D + KP S + N + + +S N + ++ + + S RN + NSGI Y ++ ST M +N + K R LR + K K + + D+ ID++SRI+FP F LFN+ Y+ Y
Sbjct: 26 QSANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKAEKA----------------NNDRNKYDGNKSVQEGGNCKPSSVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGNEITTSVSEARNSTSMVFD-----NSGIQ-YRKQ-----STARHSMDRNAQSKKPR----LRRRSSQLKIK-IPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYY 496
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Zebrafish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:ZFIN;Acc:ZDB-GENE-101102-2]) HSP 1 Score: 363.999 bits (933), Expect = 6.716e-119 Identity = 222/506 (43.87%), Postives = 308/506 (60.87%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKP-SCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQAS----RNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
S+NE + T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G AV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E +E++ NND +D + KP S + N + + +S N + ++ + + S RN + NSGI Y ++ ST M +N + K R LR + K K + + D+ ID++SRI+FP F LFN+ Y+ Y
Sbjct: 26 QSANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKAEKA----------------NNDRNKYDGNKSVQEGGNCKPSSVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGNEITTSVSEARNSTSMVFD-----NSGIQ-YRKQ-----STARHSMDRNAQSKKPR----LRRRSSQLKIK-IPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYY 496
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Zebrafish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:ZFIN;Acc:ZDB-GENE-101102-2]) HSP 1 Score: 363.229 bits (931), Expect = 2.946e-118 Identity = 222/505 (43.96%), Postives = 308/505 (60.99%), Query Frame = 3
Query: 360 SSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKP-SCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQAS----RNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
S+NE + T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G AV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E +E++ NND +D + KP S + N + + +S N + ++ + + S RN + NSGI Y ++ ST M +N + K R LR + K K + + D+ ID++SRI+FP F LFN+ Y+ Y
Sbjct: 61 SANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKAEKA----------------NNDRNKYDGNKSVQEGGNCKPSSVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGNEITTSVSEARNSTSMVFD-----NSGIQ-YRKQ-----STARHSMDRNAQSKKPR----LRRRSSQLKIK-IPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYY 530
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Zebrafish
Match: gabrb4 (gamma-aminobutyric acid type A receptor beta4 subunit [Source:ZFIN;Acc:ZDB-GENE-070424-211]) HSP 1 Score: 350.903 bits (899), Expect = 1.134e-113 Identity = 211/494 (42.71%), Postives = 301/494 (60.93%), Query Frame = 3
Query: 390 ASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTS-MNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQK--PSKTREISNLRFHFCRSKTK-NLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
A T+ L+K YD RLRP FG P+ + M + +AS DSISEVNMDYTIT+Y Q W+D+RLA+ + + + ++Q+W+PDT+ NDK SFLH VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G NAV ++ + + QF+IV + + +TG Y RLSL F++ RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAIDVYL+ CFVFVF ALLEYA VNY F+G ++ R+N P + E + + + N + + NLY ++ ++ N + ++ N M + + + R + F +SG+ F + PM + R+ F + S R +N R SK K + + D+ IDK+SRI+FPI+F FN+ Y+ Y
Sbjct: 38 AKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY--AEMALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGP------QQQKKINERLNKANNERPRYEEKRLREQDSISAPFQSNTL---RSYTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGSSVSDSRNSVMSFD---SSGVQ--FRK-PMGS----RDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPNLTDVSTIDKWSRIIFPITFGFFNLIYWLYY 510
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Zebrafish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230]) HSP 1 Score: 345.51 bits (885), Expect = 5.045e-112 Identity = 209/505 (41.39%), Postives = 301/505 (59.60%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGE----RAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
HS NE + +T+ L+K YD RLRP FG P+ + M + ++S D +SEVNMDYTIT+Y Q W+D+RL++ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G ++V ++NI + QF+I++Y + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G + K +K K N+E+SR+ + K+ + H R S + P N + Y + S+ R+ R+ +GR T++ R + P K+R LR + K K + + D+ IDK+SR++FPI++ FN+ Y+ Y
Sbjct: 34 HSVNEPSNMSYVKVTVDKLLKGYDIRLRPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSY--TGIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGG-SSVTGVDNIELPQFSIIDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKSRLESNKVQVDV-----------------HGSIPLTNLDLR----LSGAEMLGALGDPRNTMFS--YDSASIQYRKPLTGRDL------YGR---------------PTASIERPL----APKKSR----LRRRAAQLKVK-IPDLTDVNAIDKWSRVIFPITYTFFNLVYWLYY 482
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Xenopus
Match: dusp5 (dual specificity phosphatase 5 [Source:Xenbase;Acc:XB-GENE-957572]) HSP 1 Score: 360.918 bits (925), Expect = 6.959e-118 Identity = 221/491 (45.01%), Postives = 304/491 (61.91%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSN---LSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKF-NSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y QYW+D+RLA+ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W G NAV +E I + QF+I++ H LVS +TG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E S +S NK++ F + + H + HN + G+ TS+++ R A+ F NSGI Y ++ S R +N P KT +LR + K K + + D+ ID++SRI+FPI+F LFN+ Y+ Y
Sbjct: 40 TVDKLLKGYDIRLRPDFGGSPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGDNAVTGVERIELPQFSIMD---HKLVSKNVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKSAKS--------------NKDHSKFESNRVDAHGNILLTTLEI------------------HNEVTGN-EITTSVSDARNSAT------------SFDNSGIQ-YRKQSTARDSLGRRTADRNHPPKKT----HLRRRSSQLKIK-IPDLTDVNAIDRWSRIVFPITFSLFNLIYWLYY 473
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027]) HSP 1 Score: 353.984 bits (907), Expect = 3.094e-115 Identity = 207/522 (39.66%), Postives = 300/522 (57.47%), Query Frame = 3
Query: 294 FWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
W+F + +C S N+ + T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL+++V + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G NAV +E + + QF+I++Y++ + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G +R + + +H NN+ +L + N + + P + + Y +S+ R+ R H +GR + R + Q +K R S L+ N+ + D+ ID++SR++FP+ F FNI Y+ Y
Sbjct: 12 IWSFPVLITMVCT--------QSVNDPSNMTLVKETVDRLLKGYDIRLRPDFGGDPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFG-----------RGPQRQKRAAERAAH------ANNEQMRMELNKMDPHENILLSTLEIKNEMAASEAVMGLGDPRSTMLA--YDTSSIQYRKAGLPR------HSYGR-----------------NALERHVVQ-KKSRLRRRASQLKI--------NIPDLTDVNAIDRWSRMIFPVVFSFFNIVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027]) HSP 1 Score: 352.443 bits (903), Expect = 4.809e-115 Identity = 202/487 (41.48%), Postives = 290/487 (59.55%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL+++V + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G NAV +E + + QF+I++Y++ + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G +R + + +H NN+ +L + N + + P + + Y +S+ R+ R H +GR + R + Q +K R S L+ N+ + D+ ID++SR++FP+ F FNI Y+ Y
Sbjct: 16 TVDRLLKGYDIRLRPDFGGDPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFG-----------RGPQRQKRAAERAAH------ANNEQMRMELNKMDPHENILLSTLEIKNEMAASEAVMGLGDPRSTMLA--YDTSSIQYRKAGLPR------HSYGR-----------------NALERHVVQ-KKSRLRRRASQLKI--------NIPDLTDVNAIDRWSRMIFPVVFSFFNIVYWLYY 449
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027]) HSP 1 Score: 352.829 bits (904), Expect = 5.564e-115 Identity = 202/487 (41.48%), Postives = 290/487 (59.55%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL+++V + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G NAV +E + + QF+I++Y++ + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G +R + + +H NN+ +L + N + + P + + Y +S+ R+ R H +GR + R + Q +K R S L+ N+ + D+ ID++SR++FP+ F FNI Y+ Y
Sbjct: 22 TVDRLLKGYDIRLRPDFGGDPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFG-----------RGPQRQKRAAERAAH------ANNEQMRMELNKMDPHENILLSTLEIKNEMAASEAVMGLGDPRSTMLA--YDTSSIQYRKAGLPR------HSYGR-----------------NALERHVVQ-KKSRLRRRASQLKI--------NIPDLTDVNAIDRWSRMIFPVVFSFFNIVYWLYY 455
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027]) HSP 1 Score: 352.443 bits (903), Expect = 1.537e-114 Identity = 202/487 (41.48%), Postives = 290/487 (59.55%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL+++V + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G NAV +E + + QF+I++Y++ + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G +R + + +H NN+ +L + N + + P + + Y +S+ R+ R H +GR + R + Q +K R S L+ N+ + D+ ID++SR++FP+ F FNI Y+ Y
Sbjct: 46 TVDRLLKGYDIRLRPDFGGDPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFG-----------RGPQRQKRAAERAAH------ANNEQMRMELNKMDPHENILLSTLEIKNEMAASEAVMGLGDPRSTMLA--YDTSSIQYRKAGLPR------HSYGR-----------------NALERHVVQ-KKSRLRRRASQLKI--------NIPDLTDVNAIDRWSRMIFPVVFSFFNIVYWLYY 479
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Mouse
Match: Gabrb1 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 1 [Source:MGI Symbol;Acc:MGI:95619]) HSP 1 Score: 353.984 bits (907), Expect = 2.582e-115 Identity = 215/504 (42.66%), Postives = 300/504 (59.52%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENS--ERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTE-NREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
HSSNE + T+ L+K YD RLRP FG P+ + M + VAS D +SEVNMDYT+T+Y Q W+D+RL++ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W G AV + I + QF+IV+Y + + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTIST +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G+ ++K ++ S E++R+ K+ + H + R N S + + P K ++Y+ S AS YRK P+S+ R + ++ P K R +R + K K + + D+ IDK+SR+ FPI+F LFN+ Y+ Y
Sbjct: 26 HSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNRLEMNKVQ-----------------VDAHGNILLSTLEIR--NETSGSEVLTGVSDP----KATMYSYDS-------ASIQYRK--------------------PLSSREGFGRGLDRHGVPGKGR----IRRRASQLKVK-IPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 347.821 bits (891), Expect = 5.683e-113 Identity = 214/490 (43.67%), Postives = 297/490 (60.61%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSN---LSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+ + M + +AS D +SEVNMDYT+T+Y QYW+D+RLA+ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G AV +E I + QF+IV H LVS +TG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q++KK+ E + +++ + +K + N D+ N+ N+ + GS+ +T + F NSGI + + M R M P K ++LR + K K + + D+ ID++SRI+FP +F LFN+ Y+ Y
Sbjct: 40 TVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVE---HRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQRQKKLAEKTAKAKNDRSKSEINRVDAHGNILLAPMDVHNEMNE-----------------------------VAGSV-GDTRNSAISFD----------------NSGIQ--YRKQSMPKEGHGRYMGDRSIPHKK---THLRRRSSQLKIK-IPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYY 471
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 347.821 bits (891), Expect = 5.806e-113 Identity = 214/490 (43.67%), Postives = 297/490 (60.61%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSN---LSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+ + M + +AS D +SEVNMDYT+T+Y QYW+D+RLA+ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G AV +E I + QF+IV H LVS +TG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q++KK+ E + +++ + +K + N D+ N+ N+ + GS+ +T + F NSGI + + M R M P K ++LR + K K + + D+ ID++SRI+FP +F LFN+ Y+ Y
Sbjct: 40 TVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVE---HRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQRQKKLAEKTAKAKNDRSKSEINRVDAHGNILLAPMDVHNEMNE-----------------------------VAGSV-GDTRNSAISFD----------------NSGIQ--YRKQSMPKEGHGRYMGDRSIPHKK---THLRRRSSQLKIK-IPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYY 471
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 347.436 bits (890), Expect = 1.659e-112 Identity = 214/490 (43.67%), Postives = 297/490 (60.61%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSN---LSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
T+ L+K YD RLRP FG P+ + M + +AS D +SEVNMDYT+T+Y QYW+D+RLA+ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G AV +E I + QF+IV H LVS +TG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q++KK+ E + +++ + +K + N D+ N+ N+ + GS+ +T + F NSGI + + M R M P K ++LR + K K + + D+ ID++SRI+FP +F LFN+ Y+ Y
Sbjct: 62 TVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVE---HRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQRQKKLAEKTAKAKNDRSKSEINRVDAHGNILLAPMDVHNEMNE-----------------------------VAGSV-GDTRNSAISFD----------------NSGIQ--YRKQSMPKEGHGRYMGDRSIPHKK---THLRRRSSQLKIK-IPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYY 493
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Mouse
Match: Gabrb2 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620]) HSP 1 Score: 341.273 bits (874), Expect = 1.624e-110 Identity = 176/332 (53.01%), Postives = 236/332 (71.08%), Query Frame = 3
Query: 294 FWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGE 1289
W+F I +C S N+ + T+ L+K YD RLRP FG P+++ M + +AS D +SEVNMDYT+T+Y Q W+D+RL++NV + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ NAV + I + QF+IV+Y + T STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G
Sbjct: 12 IWSFPLIIAAVCA--------QSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN--LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGR 333
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. UniProt/SwissProt
Match: sp|Q08832|GBRB3_DROME (Gamma-aminobutyric acid receptor subunit beta-like OS=Drosophila melanogaster OX=7227 GN=Lcch3 PE=1 SV=2) HSP 1 Score: 447.588 bits (1150), Expect = 1.160e-150 Identity = 264/505 (52.28%), Postives = 335/505 (66.34%), Query Frame = 3
Query: 381 LKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNV----------SHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
L+N + TISN+++ YD RLRP FG P+ + M+L +ASFD+ISEVNMDYTIT+YLNQYW+DERLAFN+ ++ + GDF+ +IWVPDTF ANDK SFLHDVTE+NK++R+ GDG + YGMRF+TTLACMMDLHYYPLD QNCTVEIESYGY + DV M WK V +E+ + QFTI+ Y+ + L+TG+YQRLSL F+L RN+G+FVFQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG+RAK+K KK+KE +I ++ S T D+ + + P PS R +N SI T MN +F S R R + +G ++ R Q ++ R + L+ + + K++D+ IIDK+SR++FPISF+ FN+GY+ Y L
Sbjct: 37 LENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP--TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCP-GKIGKSERSETCSTTE--------DIIELQDVRMSPIPSLR--------------RGTYNATLDSIGTET-MNLGKFPPS-------FRITRNYGTG------------HSQLRRRAQRGISTRPRMLHALK-RGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYIL 495
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. UniProt/SwissProt
Match: sp|P26714|GBRB_LYMST (Gamma-aminobutyric acid receptor subunit beta OS=Lymnaea stagnalis OX=6523 PE=2 SV=1) HSP 1 Score: 438.343 bits (1126), Expect = 5.135e-147 Identity = 250/501 (49.90%), Postives = 327/501 (65.27%), Query Frame = 3
Query: 387 NASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAF--------NVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
N + TI +L+K YD RLRP FG P+ I +E+++ASFDSISEV+MDYTIT+YLNQYW+DERL F + + + + G F+ +IWVPDTFLANDK SFLHD+TEKNKM+R+YG+G + YGMRF+TTLACMMDLH YPLD Q CTVEIESYGY +DD+ + W N R AV +E++ + QF+I NY + LSTG YQRLSL FQL RN+G+F+FQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTIS GVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG RA K ++R R T + + ++ N++ +E K + + ++ + + R+ I R F H ++ + Y IP T+ R + P + R +S+ R +S + +V+D+ IDK++R++FP+ FI+FN Y+ +Y L
Sbjct: 32 NVTNTIDSLLKGYDIRLRPSFGGAPLEIGIEVILASFDSISEVDMDYTITMYLNQYWRDERLQFIFNESLDLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSFLHDITEKNKMVRLYGNGSLVYGMRFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLNDRGAVTGVEDVSLPQFSITNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARA-------KRKAKRLRERATSVRKRVDDGDQMNNTNMDTVELKEVHMVPTSVGVTNSQSFNLDLDDGSGDDTGFRVVPPI----------------PRSFTHS-----HATTHGY---IP--TNVVRRRSSSHVPPRRRRLLSHFR-QKAKSIKVKIPRVQDVNTIDKYARLMFPLLFIIFNTSYWSVYLL 498
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. UniProt/SwissProt
Match: sp|O18276|GBRB_CAEEL (Gamma-aminobutyric acid receptor subunit beta OS=Caenorhabditis elegans OX=6239 GN=gab-1 PE=2 SV=3) HSP 1 Score: 382.489 bits (981), Expect = 1.200e-124 Identity = 234/507 (46.15%), Postives = 308/507 (60.75%), Query Frame = 3
Query: 432 RLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXX-------XXXENSERSRINNTK--------------------LSHPIFTEN--KNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
RLRP FG + + M++++ASFDSISEV+MDYT+T+YL+QYW DERL ++ + + G+FS IWVPDTFLANDK+S+LH+VTE+NKMLRI DG++ YGMR ++TL+C M+L +PLD QNCTVEIESYGY +V M W N AVH +E + QFTI + + + +TG YQRLSL FQL R+VG+F+FQTYLP +LIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVR SLPRISYVK+ID+YLV+CFVFVF+ALLEYAAVNY++WG + + S +N K L + T N N++F + K + P CR N S +E + + P Y+ TS+ R AS N++ H GR S + R S + IS + K ++VRD+ +IDK+SR++FP+ FI+FN+ Y+ Y +
Sbjct: 68 RLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKW-NYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYWGRERGKGGGGNEWPVNGANKEDRESAVNVQKWVPSGLMDGVPQPQDRRVEALEEAMSTSNTAAQNNNFESTSKPKKRSSSPIPPLCRAGNTIS--EESESPDYPR-------YSTTSLKGARPHASLNHKTH-HLKGRS--------------SARAKRRMTLARMNVSMKQSISGIGRR--ARKVIPTIRVRDVNLIDKYSRVVFPVCFIVFNLFYWSYYMM 547
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. UniProt/SwissProt
Match: sp|P50571|GBRB1_MOUSE (Gamma-aminobutyric acid receptor subunit beta-1 OS=Mus musculus OX=10090 GN=Gabrb1 PE=1 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 1.806e-114 Identity = 215/504 (42.66%), Postives = 300/504 (59.52%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENS--ERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTE-NREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
HSSNE + T+ L+K YD RLRP FG P+ + M + VAS D +SEVNMDYT+T+Y Q W+D+RL++ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W G AV + I + QF+IV+Y + + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTIST +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G+ ++K ++ S E++R+ K+ + H + R N S + + P K ++Y+ S AS YRK P+S+ R + ++ P K R +R + K K + + D+ IDK+SR+ FPI+F LFN+ Y+ Y
Sbjct: 26 HSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNRLEMNKVQ-----------------VDAHGNILLSTLEIR--NETSGSEVLTGVSDP----KATMYSYDS-------ASIQYRK--------------------PLSSREGFGRGLDRHGVPGKGR----IRRRASQLKVK-IPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. UniProt/SwissProt
Match: sp|P18505|GBRB1_HUMAN (Gamma-aminobutyric acid receptor subunit beta-1 OS=Homo sapiens OX=9606 GN=GABRB1 PE=1 SV=2) HSP 1 Score: 353.214 bits (905), Expect = 3.058e-114 Identity = 214/504 (42.46%), Postives = 301/504 (59.72%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENS--ERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMST-STENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
HS+NE + T+ L+K YD RLRP FG P+ + M + VAS D +SEVNMDYT+T+Y Q W+D+RL++ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W G AV + I + QF+IV+Y + + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTIST +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G+ ++K ++ S E++++ K+ + H + R N S + + P K ++Y+ S AS YRK P+S+ R + ++ PSK R +R + K K + + D+ IDK+SR+ FPI+F LFN+ Y+ Y
Sbjct: 26 HSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY--SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNKLEMNKVQ-----------------VDAHGNILLSTLEIR--NETSGSEVLTSVSDP----KATMYSYDS-------ASIQYRK--------------------PLSSREAYGRALDRHGVPSKGR----IRRRASQLKVK-IPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. TrEMBL
Match: A0A2Z5X785 (Gamma-aminobutyric acid receptor subunit beta A OS=Dugesia japonica OX=6161 PE=2 SV=1) HSP 1 Score: 827.395 bits (2136), Expect = 0.000e+0 Identity = 427/528 (80.87%), Postives = 471/528 (89.20%), Query Frame = 3
Query: 288 WIFWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTK--NLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
WI+WN +SI + ++SS F SSNEY+ LKNAS+TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFN SHA AMI MPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDG+IFYGMRF+TTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTI +YDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAKQKKKK+KEN +RSR N TKLS P+F ++ NND F F+ ENK+N+ +FPK S D NLYSC +E+Q + PHNRIK Y + S+N+++F++S+NYRKF+H+F +K++SGINDYFEEIPMS S E+ E+F NQK + SN + FC+SK+K +L KVR+IKIIDKFSRILFPI F+LFNI YFCIYSL
Sbjct: 6 WIYWNSISILGFFIGLNSSIQNFQSSNEYDHLKNASVTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNASHAGAMITMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGKIFYGMRFTTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTINSYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAKQKKKKLKENYDRSRTNLTKLSQPLFPDDMNNDLFLFNSENKNNEVVFPKTSSPDHNLYSCHREYQASGFPHNRIKSCSYTSNSVNSKKFRSSKNYRKFMHKFSKKYSSGINDYFEEIPMSASIEHTEIFNNQKTNTNPRQSNWKSQFCQSKSKHLHLPKVRNIKIIDKFSRILFPICFLLFNICYFCIYSL 533
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. TrEMBL
Match: R7UBK0 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_144043 PE=3 SV=1) HSP 1 Score: 469.929 bits (1208), Expect = 6.201e-157 Identity = 271/496 (54.64%), Postives = 348/496 (70.16%), Query Frame = 3
Query: 381 LKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWK-NGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
L+N S TI+NL++ YD RLRP+FG + I+M+L++ASFDSISEVNMDYTIT+YLNQYW+DERLAF+ ++ D + + GDF+ +IWVPDTF ANDK+SFLHDVTEKNKM+R++GDG + YGMRF+TTLACMMDLHYYPLD QNCTVEIESYGYP+ DV M WK G +AV + + + QFTIV+Y + V L+TG YQRLSL F++ RN+G+F+FQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG RAK+K K++KE ++ ++ H N + SF + + + P S R+ ++ F F + + S+ N M +A+ R + RK N +STS ++MF N K K +EI + + V+D+ IDK+SR++FP FI+FN+ Y+C Y L
Sbjct: 38 LQNVSRTIANLLEKYDIRLRPQFGGEALIIEMKLLLASFDSISEVNMDYTITIYLNQYWKDERLAFSDNY-DETMTLTGDFAEKIWVPDTFFANDKHSFLHDVTEKNKMVRLHGDGSLVYGMRFTTTLACMMDLHYYPLDVQNCTVEIESYGYPMQDVVMKWKGGGEDAVDGVAKVEIPQFTIVDYRCISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAKRKAKRLKEQAKANQ------EHQYQRVNCSIVSFQNEAIELQDVRMSPILSLRN------RQNFNFDSED---VAQSMAPNFRMQTAVPRATYPIRGGHTQLLRKRN-----------VSTSKNRKKMFTNLK-KKAKEIR-----------QKIPSVKDVNKIDKYSRLVFPSLFIVFNVCYWCFYLL 494
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. TrEMBL
Match: A0A1I8MLG2 (Uncharacterized protein OS=Musca domestica OX=7370 GN=101891413 PE=3 SV=1) HSP 1 Score: 457.218 bits (1175), Expect = 5.773e-152 Identity = 258/506 (50.99%), Postives = 335/506 (66.21%), Query Frame = 3
Query: 381 LKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNV-----------SHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
L+N + TI+ ++K YD RLRP FG P+ + M+L +ASFD+ISEVNMDYTIT+YLNQYW+DERLAFN + ++ + GDF+ +IWVPDTF ANDK SFLHDVTE+NK++R+ GDG + YGMRF+TTLACMMDLHYYPLD QNCTVEIESYGY + DV M WK V +E+ + QFTI+ Y+ + L+TG+YQRLSL F+L RN+G+F+FQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG+RA K+ +R + ++K S + S D+ + + P PS R N NS N + G+ + + F+ +RNY T++ + ++ Q+ +K R I L+ K + K++D+ IIDK+SR++FP+SF+ FN+GY+ Y L
Sbjct: 36 LENVTQTITKILKGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNAYGPYYDDDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP--TPVRGVEDAQLPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRA-------KKKVKRGKDGDSKKSGK--QDKSETCSTAEDIIELQDVRMSPIPSLRKGNY----------NSTLNSL-GAETLDLAKFPPSFRIARNY------------------------GTTSRSNLRYRGQRGNKPRVIHALKKGASAIKA-TIPKIKDVNIIDKYSRMVFPVSFMAFNLGYWLFYIL 494
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. TrEMBL
Match: A0A5N4ANR0 (Uncharacterized protein OS=Photinus pyralis OX=7054 GN=PPYR_06803 PE=4 SV=1) HSP 1 Score: 456.062 bits (1172), Expect = 1.265e-151 Identity = 260/513 (50.68%), Postives = 329/513 (64.13%), Query Frame = 3
Query: 321 WICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
W C I + + + L N + TIS L++ YD RLRP FG P+ + M+L +ASFD+ISEVNMDYTIT+YLNQYW+DERLAF S + ++ + GDF+ +IWVPDTF ANDK SFLHDVTE+NK++R+ GDG I YGMRF+TTLACMMDLHYYPLD QNCTVEIESYGY + DV M WK V +E + QFTI+ Y+ + L+TG+YQRLSL F+L RN+G+FVFQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG RA + + + P K+ D+ + HN+ I R + S + + S G + + +F S R R G N P ST + K + +R C K ++ K++D+ +IDK+SRI+FP++F+LFN+GY+ Y
Sbjct: 12 WYCCIIAGSVGIKKTMVSDRLDNVTQTISKLLEGYDIRLRPNFGGDPLRVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAF--STDEEILTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVMDVVMYWKE--TPVRGVEEAELPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARA---------KKKSKKSKEVEEKRP---GTKSTDTTY----QPHNEDIIELQDVRMSPIASIRNRHNSSKSTSGGATGEV------DPSKFPPS-------FRISRSVGYGFN------PRSTPGLRYRGSKGNPLHKPKVFHVIRKGACALKA-SMPKIKDVNVIDKYSRIIFPVTFLLFNVGYWAFY 484
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. TrEMBL
Match: A0A1I8PT20 (Uncharacterized protein OS=Stomoxys calcitrans OX=35570 GN=106095898 PE=3 SV=1) HSP 1 Score: 456.062 bits (1172), Expect = 1.345e-151 Identity = 258/506 (50.99%), Postives = 334/506 (66.01%), Query Frame = 3
Query: 381 LKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNV-----------SHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
L+N + TI+ ++K YD RLRP FG P+ + M+L +ASFD+ISEVNMDYTIT+YLNQYW+DERLAFN + ++ + GDF+ +IWVPDTF ANDK SFLHDVTE+NK++R+ GDG + YGMRF+TTLACMMDLHYYPLD QNCTVEIESYGY + DV M WK V +E+ + QFTI+ Y+ + L+TG+YQRLSL F+L RN+G+F+FQTYLPSILIVMLSWVSFWI+HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLV+CFVFVF+ALLEYAAVNYT+WG+RA K+ +R + + K S + S D+ + + P PS R N NS N + G+ + + F+ +RNY T++ + ++ Q+ +K R I L+ K + K++D+ IIDK+SR++FP+SF+ FN+GY+ Y L
Sbjct: 36 LENVTQTITKILKGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNAYGPYYDDDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP--TPVRGVEDAQLPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRA-------KKKVKRGKDGDIKKSGK--PDKSETCSTAEDIIELQDVRMSPIPSLRKGNY----------NSTLNSL-GAETLDLAKFPPSFRIARNY------------------------GTTSRSNLRYRGQRGNKPRVIHALKKGASAIKA-TIPKIKDVNIIDKYSRMIFPVSFMAFNLGYWLFYIL 494
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Cavefish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:103041149]) HSP 1 Score: 372.089 bits (954), Expect = 4.572e-122 Identity = 230/516 (44.57%), Postives = 313/516 (60.66%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSN----QIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKP-SCRDPNLYSCQKEFQFANSP----------HNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
S+NE + T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ A IP+ N Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G NAV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E +E++ NND +D +A KP S + N + + +S HN + G+ TS++ R S + NSGI + P +T + + +N +P K R LR + K K + + D+ ID++SRI+FP F LFN+ Y+ Y
Sbjct: 26 QSANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY------AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKAEKA----------------NNDRTKYDGNKSVQEAGNCKPSSVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGN-EVTTSVSEARNSTSMVFD----------NSGIQYRKQSAPRHDTTRH-SVDRNAQPKKAR----LRRRSSQLKIK-IPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYY 501
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Cavefish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:103041149]) HSP 1 Score: 370.933 bits (951), Expect = 2.588e-121 Identity = 230/515 (44.66%), Postives = 313/515 (60.78%), Query Frame = 3
Query: 360 SSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSN----QIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKP-SCRDPNLYSCQKEFQFANSP----------HNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
S+NE + T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ A IP+ N Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G NAV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E +E++ NND +D +A KP S + N + + +S HN + G+ TS++ R S + NSGI + P +T + + +N +P K R LR + K K + + D+ ID++SRI+FP F LFN+ Y+ Y
Sbjct: 48 SANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY------AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKAEKA----------------NNDRTKYDGNKSVQEAGNCKPSSVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGN-EVTTSVSEARNSTSMVFD----------NSGIQYRKQSAPRHDTTRH-SVDRNAQPKKAR----LRRRSSQLKIK-IPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYY 522
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Cavefish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:103041149]) HSP 1 Score: 367.466 bits (942), Expect = 1.885e-120 Identity = 227/504 (45.04%), Postives = 307/504 (60.91%), Query Frame = 3
Query: 360 SSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSN----QIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
S+NE + T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ A IP+ N Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G NAV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E +E++ NND +D +Q N+ E HN + G+ TS++ R S + NSGI + P +T + + +N +P K R LR + K K + + D+ ID++SRI+FP F LFN+ Y+ Y
Sbjct: 48 SANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY------AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKAEKA----------------NNDRTKYDGNKVDSQG----------NILLTTLEI------HNEVAGN-EVTTSVSEARNSTSMVFD----------NSGIQYRKQSAPRHDTTRH-SVDRNAQPKKAR----LRRRSSQLKIK-IPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYY 495
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Cavefish
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4-like [Source:NCBI gene;Acc:103032374]) HSP 1 Score: 352.058 bits (902), Expect = 3.224e-114 Identity = 219/526 (41.63%), Postives = 318/526 (60.46%), Query Frame = 3
Query: 306 LSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTS-MNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQK--PSKTREISNLRFHFCRSKTK-NLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
L++ IC + + T S A T+ L+K YD RLRP FG P+ + M + +AS DSISEVNMDYTIT+Y Q W+D+RLA+ + + ++Q+W+PDT+ NDK SFLH VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G+NAV ++ + + QF+IV + + +TG Y RLSL F++ RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAIDVYL+ CFVFVF ALLEYA VNY F+G ++ K ++ K N+ER R + +L ++ + F + + Q NLY ++ ++ N + ++ N M + + + R + F +SG+ F + PM++ R+ F + S R +N R SK K + + D+ IDK+SR++FPI+F FN+ Y+ Y
Sbjct: 16 LTVLSSICFVQCTSTGTGISV-------AKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY--VEMPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGKNAVTGVDKLELPQFSIVELHLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKINERLNKANNERPRYEDKRLRE----QDSISAPFQTNTLRSYTQR---------RNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGSSVSDSRNSVMSFD---SSGVQ--FRK-PMAS----RDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPNLTDVSTIDKWSRVIFPITFGFFNLIYWLYY 509
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Cavefish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230]) HSP 1 Score: 348.591 bits (893), Expect = 1.416e-113 Identity = 210/508 (41.34%), Postives = 303/508 (59.65%), Query Frame = 3
Query: 357 HSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGE----RAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKV---RDIKIIDKFSRILFPISFILFNIGYFCIY 1859
HS NE + +T+ L+K YD RLRP FG P+ + M + ++S D +SEVNMDYTIT+Y Q W+D+RL++ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G ++V ++NI + QF+I++Y + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G + K +K K N+E+SR+ K+ + + N + DL + + S DP F F + AS YRK P++ R+++ S R I++ + H R + +K+ D+ IDK+SR++FPI++ FN+ Y+ Y
Sbjct: 12 HSGNEPSNMSYVKVTVDKLLKGYDIRLRPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSY--TGIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQEG-SSVTGVDNIELPQFSIIDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKSRLECNKVQ--VVDAHGNIPLTNLDLRLTGAEML---GSLGDPR----NTMFSFDS----------------------ASIQYRK--------------------PLT----GRDLYGRPTASLERPITHKKSHLRRRAAQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWLYY 461
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000073.1 (pep scaffold:Pmarinus_7.0:GL476340:503477:541718:1 gene:ENSPMAG00000000064.1 transcript:ENSPMAT00000000073.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 272.322 bits (695), Expect = 3.763e-85 Identity = 136/317 (42.90%), Postives = 205/317 (64.67%), Query Frame = 3
Query: 339 SSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXX----XXXXXXXXXXRSSLPRI-SYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
S+ + S EY+ I NLM+ Y+ LRP F +GP++I M L +AS D+ISE+NMDYT T++L Q WQDERL F + + + G +WVPDTF+ + K SFLHD+T +N+++RI+ +G + Y +R +TT+AC MDL YP+D+Q CT+++ES+GY +D+ W G ++V ++ + + Q+T+ Y + TG Y +L F+L RN+ +F+ +TY+PS+L+V+LSWVSFWIS + AR+ +G LTMTT+ G R+SLP ++KAIDVYL +CF F+F AL+EYA ++
Sbjct: 16 STRAAYQGSQEYKEGDALPQKIQNLMRGYNKYLRPSFDNGPVAIGMSLDIASIDTISEINMDYTATIFLRQRWQDERLCF---EGNKSLSLDGRLVELLWVPDTFIVDSKRSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWGYNTNDLVFYWTRGNDSVRGLDTLKLAQYTVEGYYTSVSEAVYETGQYPKLVFHFKLRRNILYFILETYIPSVLLVVLSWVSFWISQSSVPARICIGTNAGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALVEYAVAHF 329
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008467.1 (pep scaffold:Pmarinus_7.0:GL477211:8305:20106:1 gene:ENSPMAG00000007648.1 transcript:ENSPMAT00000008467.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 238.424 bits (607), Expect = 5.452e-72 Identity = 139/292 (47.60%), Postives = 188/292 (64.38%), Query Frame = 3
Query: 420 NYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPG---DFSN--QIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVN-YDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYT 1277
Y+ R+RP FG +++ + + SF SI E DY +T+YL Q W D RLA+ SH P+P D SN IW PD F N+K + H++T NKMLRI +G + Y MR + TL+C MDLH +P+D Q C++ +ES+GY D+ W NG V E + + QF + N + STG + + F LHR +GF++ Q Y+PSILIV+LSWVSFWI+ EA ARVALGITTVLT+TT STG R+SLP++SY+KA+D+++ C +FVF+ALLEYAAVN T
Sbjct: 55 GYNHRVRPNFGGPAVNVSCGVFIRSFGSIQEATSDYRMTVYLRQRWTDPRLAY--SH----YPVPLLHLDQSNIKHIWKPDLFFDNEKSAHFHEITTDNKMLRIANNGVVDYAMRLTLTLSCPMDLHNFPMDTQMCSMYLESFGYTTADIVFHW-NGPTPVSLFEGLTLPQFVLSNKISTGSCTKTYSTGSFTCIFAKFTLHREMGFYLIQLYVPSILIVILSWVSFWINMEAAPARVALGITTVLTLTTQSTGARASLPKVSYIKAMDIWMATCLLFVFAALLEYAAVNVT 339
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Sea Lamprey
Match: glra2 (glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]) HSP 1 Score: 233.032 bits (593), Expect = 1.032e-70 Identity = 124/274 (45.26%), Postives = 186/274 (67.88%), Query Frame = 3
Query: 459 PMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVN-YDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYT 1277
P+++ + + SF SI+E MDY + ++L Q W D RLA++ + D + + + IW PD F AN+K + H+VT NK+LRI+ DG + Y +R + TL+C MDL +P+D Q C +++ES+GY ++D+ WK AV E + + QF + + D+ + +TG + + + F L R +G+++ Q Y+PS+LIV+LSWVSFWI+ +A ARVALGITTVLTMTT S+G R+SLP++SYVKAID+++ VC +FVF+ALLEYAAVN+
Sbjct: 5 PVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYS-EYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEWKQ-EGAVQVAEGLTLPQFVLKDEKDLVYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV 276
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Sea Lamprey
Match: gabra6a (gamma-aminobutyric acid (GABA) A receptor, alpha 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1692]) HSP 1 Score: 215.698 bits (548), Expect = 1.111e-62 Identity = 118/299 (39.46%), Postives = 176/299 (58.86%), Query Frame = 3
Query: 384 KNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNI--ENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
+N + + L+ YD+RLRP FG + ++ V SF +S+V MDYT+ ++ Q W DERL F+ ++ + N+IW PDT+ N K S H++T NK+ RI +G + Y MR + C M L +P+D C ++ SY YP ++ SW G N + E+ ++Q+ + ++V + G Y +++ F L R +G+F+ QTY+P I+ V+LS VSFWI+ E+ AR GITTVLTMTT S R SLP++SY A+D ++ V F FVFSAL+E+AAVNY
Sbjct: 43 ENITKILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMDYTMDVFFRQTWVDERLKFD--GPIEILRLNNLMVNRIWTPDTYFRNGKKSIAHNMTAPNKLFRIMQNGTVLYTMRLTINAECPMRLMDFPMDGHTCPLKFGSYAYPKSEIIYSWTKGANNSVEVPQESSSLLQYDLTGHNVSSEELKSKIGDYVVMTVSFYLKRKMGYFIVQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTQSISARGSLPKVSYATAMDWFIAVSFAFVFSALIEFAAVNY 339
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Sea Lamprey
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:ZFIN;Acc:ZDB-GENE-101102-2]) HSP 1 Score: 204.527 bits (519), Expect = 8.701e-61 Identity = 142/371 (38.27%), Postives = 202/371 (54.45%), Query Frame = 3
Query: 771 MMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSER-SRINNTKLSHPIFTENKNNDSFH------FDLENKHNQAIFPKPSC-RDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
MMDL YPLDE CT+EIESYGY +D+K W+ G A+ + I + QFTIV ++ + +TG Y RLSL F+L RN+G+F+ QTY+P+ILI +LSWVSFWI+++A++ARVALG+TTVLTMTTIST +R +LP+I YVKAID+YL+ CF FVF ALLEYAAVNY F+G ++ K+ +ER +R NN K P + D+ ++ N+ + P DP + + P +++ + R A+R R GR T R +K R S L+ + + ++ IDK+SR++FP++F FN Y+ Y
Sbjct: 1 MMDLRRYPLDEPFCTLEIESYGYTTEDIKFYWRGGDTAITGVGEIKLPQFTIVKHNQVSRNVQFATGSYPRLSLSFRLKRNIGYFILQTYMPTILITILSWVSFWINYDASAARVALGVTTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFCFVFLALLEYAAVNYLFFGR----GPQRAKKAAERIARANNEK---PRAADTSKVDAHGNILLTSLEIRNEMGGPGYGHPGLPGDPRATGLGLD-HHHHHPGVQLRQPVQGGGETLER---AARGER------GR-----------------GTLQRGQGGAKKTRLQRRTSQLKI--------KIPDLSNVNAIDKWSRVIFPVTFGFFNAVYWLYY 329
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Nematostella
Match: EDO35410 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK4]) HSP 1 Score: 241.891 bits (616), Expect = 7.802e-75 Identity = 122/299 (40.80%), Postives = 195/299 (65.22%), Query Frame = 3
Query: 387 NASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWK---NGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
N++L + NL++ YD R+RP P+ + +++ V++ ++ E+NMD+TI +YL QYW+DERL F AM+ + D + QIWVP T+ K ++ HDVT N +L++ DG +FY +R + T +C +DL +P D Q+C++ +ESYGY DV W + +A++ +++ + QF ++ ++ + G + L F++ R +G+F+ TY+PS +IV++SW+SFWI E ARVALGITTVLTMTT+ + R++LP++SYVKAID YL++C +FVF ++LEY V Y
Sbjct: 21 NSTLVLKNLLEGYDRRIRPGSKGEPVVVYVDMYVSNIWAMQEMNMDFTIDIYLRQYWRDERLQFETQTPGAMLTLSSDINKQIWVPSTYFLATKKAYFHDVTTDNYLLQVKPDGSLFYSIRLTITTSCRLDLRDFPHDTQSCSLSLESYGYQSTDVLYVWNERLDNTSAIYIHDDLELPQFEVLGVSRSAKMNKYNIGNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCLIFVFGSILEYTCVTY 319
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Nematostella
Match: EDO40478 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S763]) HSP 1 Score: 228.024 bits (580), Expect = 4.462e-70 Identity = 111/274 (40.51%), Postives = 184/274 (67.15%), Query Frame = 3
Query: 459 PMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSW-KN-GRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
P+ + ++ V ISE +M++ + + QYWQD RLA++ + + + + + +W+PD + N+K HD+T++N+++R++ DGR+F+ +R S T +C M LH YP+D+Q C + ES+ YP ++ W KN G V + + + QF + Y + +N +TG Y RL++ F+ R++GFF+ QTY+P+ LIVMLSW++FWI+H +T AR+ LGITTVLTMTT++ R+SLP++SYVK+I+ +L++CF++VF +L+EY V+Y
Sbjct: 5 PVIVYTDMFVLDIGDISEADMEFRVMFFYRQYWQDTRLAYDYTGYNKRLALNARMVDYMWIPDIYFVNEKSGIKHDLTKQNEVVRVWPDGRVFHSIRLSMTASCPMKLHSYPMDKQTCKLSFESFSYPSTELIFKWNKNRGNKEVQVSDELQIPQFILTEYKTTSEFANFTTGSYSRLTVLFRFERSIGFFLIQTYIPAYLIVMLSWIAFWINHTSTPARIGLGITTVLTMTTLTNSARASLPKVSYVKSIEWFLIMCFLYVFMSLVEYGCVSY 278
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Nematostella
Match: EDO36340 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ14]) HSP 1 Score: 220.32 bits (560), Expect = 5.003e-67 Identity = 126/293 (43.00%), Postives = 177/293 (60.41%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGR-NAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
T+ L + D RLRP FG P+ + +++ + + IS NMDY + LY Q W D RLAF++ A I + G N IW+PDT N+K S H VT+ N +L I+ +G + MR S T C MDL YP+D Q C + I SY D++ + WK G +V ENI++ Q ++ +V ++G Y RLSL F+ R + F+ +TY+P +LIV LSWVSFWI+++ ARVAL ITTVLT+ T+S VR+SLP+++Y K D L+ V+VF AL+EYA VNY
Sbjct: 1 TLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQTWHDPRLAFDLPEA---ITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLSIWPNGTTYLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNLILKWKFGETGSVTWAENINLPQMDVLGVKGREVVDVFASGNYSRLSLAFKFKRRISLFLTETYVPLVLIVALSWVSFWINYKVAPARVALCITTVLTIITLSASVRTSLPKVTYTKYSDWILITGLVYVFGALVEYAVVNY 290
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Nematostella
Match: EDO37555 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFG6]) HSP 1 Score: 216.468 bits (550), Expect = 5.952e-64 Identity = 122/293 (41.64%), Postives = 179/293 (61.09%), Query Frame = 3
Query: 402 ISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKN-GRNAVHNIENIH-MIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
+ NL++ YD RLRP FG P+++ + V S D+I+ ++MDY + +L Q W+D RL D + + ++IWVPDT+ N K S H VT NKML I DG + Y R + +C M+L +P D QNC ++IESYGY D+V+ W+N N + + I M Q+ + + +V + G + L+ F+ R G+F+ Y P LIV+LSW+SF I E+T+AR+ALGIT+VLT+TTI + +S+P++SYVKA+D YL+ CF+FVF+ LLEY V Y
Sbjct: 10 LDNLIQGYDPRLRPDFGGDPVTVTVGFWVLSIDAINVIDMDYRMDFFLRQLWRDPRLKHRF---DDTLALSNTMLDKIWVPDTYFVNSKMSKFHSVTTINKMLSISPDGLVHYNSRVTVKASCAMNLRMFPKDVQNCNIDIESYGYSADNVQYQWENRSDNGIAVNKKIRDMPQYNLSDINVSRHFTMYVAGNWSGLTATFRFRRRSGYFIIHIYAPCALIVILSWISFCIPPESTAARIALGITSVLTITTILNMLNNSMPKVSYVKAVDWYLIGCFLFVFAVLLEYTFVLY 299
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Nematostella
Match: EDO39173 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAS4]) HSP 1 Score: 201.06 bits (510), Expect = 9.299e-60 Identity = 117/292 (40.07%), Postives = 171/292 (58.56%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAM-IPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVN-YDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAV 1268
I L YD+RLRP FG P++I + + V SF ++ E +M++++ ++ Q W+D RL H+ M +PG + W+PDTF N K + H V N + + DG I R + + +C MDL YPLD+Q C +EI SY + ++D+ WK + + I + M +F + + S TG Y L F R + + Q Y P+ LIV+LSW+SFWIS +A ARVALGITTVLT+ T+ +R+S+P++SY+KAID+YL+V F+FVF LLEY AV
Sbjct: 8 AIDGLFVGYDNRLRPYFGGPPLNISVYMSVVSFSTVYEKDMEFSLDVFFKQAWRDPRL----RHSAKMPFILPGSQKEKFWIPDTFFLNVKTARFHQVPAANTRIVVTPDGDIELSERLTVSASCRMDLRMYPLDQQTCVLEILSYSFDINDIDYRWKAKEDLI--ILDGEMNEFELKDSRGERKQKSRSCTGTYTHLVAKFVFRRRLAYSFIQIYSPTFLIVVLSWLSFWISKDAVPARVALGITTVLTIVTLMGSLRNSVPKVSYIKAIDLYLIVSFIFVFGTLLEYIAV 293
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Medaka
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:NCBI gene;Acc:101154825]) HSP 1 Score: 350.132 bits (897), Expect = 5.245e-114 Identity = 212/506 (41.90%), Postives = 303/506 (59.88%), Query Frame = 3
Query: 363 SNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNA--VHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXE---NSERSRINNTKLS--HPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
+NE + T+ L+K YD RLRP FG P+ + M + +AS D +SEVNMDYTIT+Y Q W+D+RL++ + + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G NA V +ENI + QF+I++Y + + +TG Y RLSL F+L RN+G+F+ QTY+PS LI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G +KK ++ N RSR+ ++++ I N + D+ + + DP + F+ Y + S+ R+ ASR+ +GR + + P K+R LR + K K + + D+ IDK+SR++FPI+FI FN+ Y+ Y
Sbjct: 25 ANEPSNMSYVKATVDKLLKGYDIRLRPDFGGAPVDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSY--TGIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSNAGSVTGVENIELPQFSIIDYQTLSTKAVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKAAEKAKSNENRSRLESSRVDAHGSILLSNMPTEMGGPDMMS----------TLHDP------RATMFS-----------YDSASIQYRKPMASRDL------YGRP---------------------ALDRPLGPKKSR----LRRRASQLKVK-IPDLTDVNAIDKWSRVVFPITFIFFNLVYWLYY 469
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Medaka
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4 [Source:NCBI gene;Acc:101160433]) HSP 1 Score: 350.517 bits (898), Expect = 1.171e-113 Identity = 215/523 (41.11%), Postives = 314/523 (60.04%), Query Frame = 3
Query: 306 LSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTS-MNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
L+ ++C + SS T + A T+ L+K YD RLRP FG P+ + M + +AS DSISEVNMDYTIT+Y Q W D+RLA+ D + + ++Q+W+PDT+ NDK SFLH VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G +AV ++ + + QF+IV + + +TG Y RLSL F++ RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAIDVYL+ CFVFVF ALLEYA VNY F+G ++ K ++ K N+ER+R +L + DS + ++ + NLY ++ ++ N + ++ N M + + + R + F +SG+ F + PM+ ++ ++R LR + K K + + D+ IDK+SR++FPI F FN+ Y+ Y
Sbjct: 16 LAALSFVCFVQSSSTGNTG------MSVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWTDKRLAYG--ELDLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGNSAVTGVDKLELPQFSIVELRLVSREVRFATGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKLSERLGKVNNERTRYEEKRL--------REQDSISVPFQTNTFRSF-----TQRRNLYLEEQRKVGVDAYGNILLTTLDMNNEVMPSDVGSSVSDSRNSVMSFD---SSGVQ--FRK-PMAPRDGYSHHSLDRSAMRSRANCRLRRRSSKLKLK-IPNLSDVSTIDKWSRVIFPIIFGFFNLIYWLYY 510
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169]) HSP 1 Score: 348.206 bits (892), Expect = 3.346e-113 Identity = 218/522 (41.76%), Postives = 306/522 (58.62%), Query Frame = 3
Query: 324 ICQIHSSETRFHSS--NEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSN---LSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFA-NSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIY 1859
+C S FHS N+ + T+ L+K YD RLRP FG P+ + M + +AS D +SEVNMDYT+T+Y Q W+D+RL++ S + + ++Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ W+ G AV +E I + QF+IV+ H L+S STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAIDVYL+ CFVFVF ALLEYA VNY F+G + + +K N+E+ R++ K+ + + + L+ K++ + E N P N + Y ++++ R+ +R H FGR + +R M Q +K R S L+ + + D+ IDK+SRI+FP F FNI Y+ Y
Sbjct: 13 MCTPFLSFLPFHSVGVNDPSNMPLVKQTVDRLLKGYDIRLRPDFGGPPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY--SEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVGAVTGVERIELPQFSIVD---HKLISKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKRAAEKTALANNEKMRMDPNKM-------DPHENILLGTLDIKNDMGV---------------TELALGLNDPRNTML--TYDSSNLQYRKAGLAR------HNFGR-----------------NALDRHMTQ-KKSRLRRRASQLKI--------TIPDLTDVNSIDKWSRIIFPTVFSFFNIVYWLYY 473
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Medaka
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:101165384]) HSP 1 Score: 345.895 bits (886), Expect = 4.791e-112 Identity = 221/496 (44.56%), Postives = 301/496 (60.69%), Query Frame = 3
Query: 399 TISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSN----QIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHP-IFTENKNNDSFHFDLENKHNQAIFPKPSCR---DPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYS 1862
T+ L+K YD RLRP FG P+++ M + VAS D +SEVNMDYT+T+Y QYW+D+RLA+ IP+ N Q+WVPDT+ NDK SF+H VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD++ WK G AV + I + QF+IV+Y + + STG Y RLSL F+L RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY F+G R Q +KK+ E + ++ +K P E N F + NQ + S R N+ E HN + GS T+++ +S + NSGI + + + +N KTR L+ + K K + + D+ ID++SRI+FP F LFN+ Y+ Y+
Sbjct: 39 TVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY------LGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG-RGPQMQKKLAEKALKANNERSKYEKPKSLLEGVN---CKFSSLKQSNQVQGRRHSQRVDSQGNILLTTLEI------HNEV-GSNEITTTLSETHNSSSMVFD----------NSGIQ--YRKQSAVHDPGRLSLDRNAHLKKTR----LQRRSSQLKIK-IPDLTDVNGIDRWSRIIFPSVFSLFNLIYWLYYA 500
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Medaka
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4 [Source:NCBI gene;Acc:101160433]) HSP 1 Score: 343.199 bits (879), Expect = 1.691e-111 Identity = 180/345 (52.17%), Postives = 244/345 (70.72%), Query Frame = 3
Query: 348 TRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWG----ERAXXXXXXXXENSERSRINNTKLSHPI 1370
+R HSS + A T+ L+K YD RLRP FG P+ + M + +AS DSISEVNMDYTIT+Y Q W D+RLA+ D + + ++Q+W+PDT+ NDK SFLH VT KN+M+R++ DG + YG+R +TT ACMMDL YPLDEQNCT+EIESYGY DD+ W+ G +AV ++ + + QF+IV + + +TG Y RLSL F++ RN+G+F+ QTY+PSILI +LSWVSFWI+++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAIDVYL+ CFVFVF ALLEYA VNY F+G ++ K ++ K N+ER+R +L +
Sbjct: 6 SRSHSSTGNTGMSVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWTDKRLAYG--ELDLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGNSAVTGVDKLELPQFSIVELRLVSREVRFATGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKLSERLGKVNNERTRYEEKRLREQV 348
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Planmine SMEST
Match: SMESG000026005.1 (SMESG000026005.1) HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0 Identity = 526/526 (100.00%), Postives = 526/526 (100.00%), Query Frame = 3
Query: 288 WIFWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAXXXXXXXXENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 1865
WIFWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAKQKKKKMKENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL
Sbjct: 6 WIFWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNYTFWGERAKQKKKKMKENSERSRINNTKLSHPIFTENKNNDSFHFDLENKHNQAIFPKPSCRDPNLYSCQKEFQFANSPHNRIKGSIYANTSMNNRRFQASRNYRKFIHRFGRKFNSGINDYFEEIPMSTSTENREMFQNQKPSKTREISNLRFHFCRSKTKNLLKVRDIKIIDKFSRILFPISFILFNIGYFCIYSL 531
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Planmine SMEST
Match: SMESG000018336.1 (SMESG000018336.1) HSP 1 Score: 203.371 bits (516), Expect = 8.867e-59 Identity = 112/300 (37.33%), Postives = 174/300 (58.00%), Query Frame = 3
Query: 381 LKNASLTISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRN-AVHNIENIHMIQFTIVNYDVHTLVSNL-STGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
L N S+ ++ L+ YD LRP P+ I +++ + S ISE+NM Y+ Y Q WQD+RL F+ ++ + + +W PDT+ N + S+LH++T N +RI+ DG I Y MR + C M+LH +PLD Q C + I SYGY D+ W N +V + + + QF ++N + G + L++ F L RN+G+F+ Q YLP L+V++SWV FWI+ EATS R+ LG+TTVLTM S R LP++SY A+D+Y+ C+ F+ + ++++A V+Y
Sbjct: 23 LNNISIHLNKLLDRYDRNLRPSNQGEPLIISIDINIRSMGPISEMNMVYSFDCYFRQRWQDQRLKFDGVDHPKILQLNQKLLDTVWKPDTYFMNGEGSYLHNITLPNIFVRIHNDGNIVYSMRLTIKATCPMELHRFPLDTQKCPLLIASYGYNNHDLLYKWTQSPNRSVEHDNELTLSQFHLMNISESRSTKIIPGRGNFSILAVEFILKRNIGYFMIQQYLPCCLLVIISWVGFWINREATSDRITLGVTTVLTMAFSSVDNRKDLPKVSYATALDIYVNGCYTFIAATIIQFATVHY 322
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Planmine SMEST
Match: SMESG000071005.1 (SMESG000071005.1) HSP 1 Score: 189.889 bits (481), Expect = 1.245e-52 Identity = 116/314 (36.94%), Postives = 178/314 (56.69%), Query Frame = 3
Query: 375 ELLKNASL---TISNLMKNYDSRLRP-KFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFNVSHA----DAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQFTIVNYDVHTLVSNL----STGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYA-AVNYT 1277
E +KN S+ I + +NY P + P + + + + + +SI +NM + YL Q W D RLA+ A I +P F N++W+PD F N K F++ +T N ++R+ DG I Y + + +C M L +P+D Q C + I SYGY +DD++ WK + + ++I + +F +V T+ NL STG Y L L F L R + ++ TY+P+ILIVM+SW+SFWIS EA ARV LG+ T+L + T + GV +LPR+SY+KAID+Y++ C +F+ A E+A A NY+
Sbjct: 30 ESIKNPSIRDKIIVQIFENYKKHELPTEELLKPTIVIVNIHILAINSIDVINMAFNADFYLRQEWLDRRLAWTDQEAFRNFTRPISIPSMF-NKLWLPDLFFRNGKEGFMYKMTMPNFLIRLKSDGEILYSQKITMRFSCQMHLSNFPMDSQQCEINIGSYGYTMDDLRFQWKTNESVTQS-KDIQISEF-YTPVEVLTMDCNLNSKTSTGTYSCLKLLFTLKRQLSSYLVSTYIPAILIVMVSWLSFWISVEAVPARVTLGLLTLLGILTQNKGVSGNLPRVSYIKAIDIYIIACILFIIGAFTEFAIASNYS 340
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Planmine SMEST
Match: SMESG000032691.1 (SMESG000032691.1) HSP 1 Score: 184.496 bits (467), Expect = 1.845e-51 Identity = 105/297 (35.35%), Postives = 174/297 (58.59%), Query Frame = 3
Query: 402 ISNLMKNYDSRLRPKFGSGPMSIDMELVVASFDSISEVNMDYTITLYLNQYWQDERLAFN----VSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRNAVHNIENIHMIQF---TIVNYDVHTLVSNLSTGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVN 1271
+ +++NY RP S + + + V + +S++ NM+Y+ LYL Q W D RL ++ H ++ + P +++W+PD F N K ++H +T+ N ++R++ +G + Y + + +C MDL YP+D Q+C + I SYGY LD +K W N + N+ + +F T V + T S TG Y L F L R +G ++ T++P+ LIV++SW++FW+S EA AR+ LG+ T+L + T ++G+ +LPR+SY+KAIDV+L+ C VFV ALLE+A +
Sbjct: 35 MDKILQNYSLNERP-IESNQTRVMVFMKVLAINSVNVSNMEYSTDLYLRQLWVDARLRWDNLNEFKHFNSSLVSPS-LKDRLWLPDLFFRNGKEGYVHIMTKPNYLMRLFPNGEVLYSQKITMRFSCQMDLQTYPMDTQSCEMNIGSYGYTLDQLKFYWSQT-NPMELGNNVQIPEFNAPTKVETNDCTNSSTTETGFYSCLKALFILRRQLGSYLVSTFIPNTLIVIVSWLNFWVSVEAVPARITLGLLTLLGILTQASGISGNLPRVSYIKAIDVWLIACIVFVIGALLEFAVAS 328
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Planmine SMEST
Match: SMESG000018336.1 (SMESG000018336.1) HSP 1 Score: 181.415 bits (459), Expect = 3.509e-51 Identity = 100/259 (38.61%), Postives = 153/259 (59.07%), Query Frame = 3
Query: 504 ISEVNMDYTITLYLNQYWQDERLAFNVSHADAMIPMPGDFSNQIWVPDTFLANDKYSFLHDVTEKNKMLRIYGDGRIFYGMRFSTTLACMMDLHYYPLDEQNCTVEIESYGYPLDDVKMSWKNGRN-AVHNIENIHMIQFTIVNYDVHTLVSNL-STGLYQRLSLCFQLHRNVGFFVFQTYLPSILIVMLSWVSFWISHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDVYLVVCFVFVFSALLEYAAVNY 1274
ISE+NM Y+ Y Q WQD+RL F+ ++ + + +W PDT+ N + S+LH++T N +RI+ DG I Y MR + C M+LH +PLD Q C + I SYGY D+ W N +V + + + QF ++N + G + L++ F L RN+G+F+ Q YLP L+V++SWV FWI+ EATS R+ LG+TTVLTM S R LP++SY A+D+Y+ C+ F+ + ++++A V+Y
Sbjct: 4 ISEMNMVYSFDCYFRQRWQDQRLKFDGVDHPKILQLNQKLLDTVWKPDTYFMNGEGSYLHNITLPNIFVRIHNDGNIVYSMRLTIKATCPMELHRFPLDTQKCPLLIASYGYNNHDLLYKWTQSPNRSVEHDNELTLSQFHLMNISESRSTKIIPGRGNFSILAVEFILKRNIGYFMIQQYLPCCLLVIISWVGFWINREATSDRITLGVTTVLTMAFSSVDNRKDLPKVSYATALDIYVNGCYTFIAATIIQFATVHY 262 The following BLAST results are available for this feature:
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor subunit beta A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30013129 ID=SMED30013129|Name=Gamma-aminobutyric acid receptor subunit beta A|organism=Schmidtea mediterranea sexual|type=transcript|length=1889bpback to top protein sequence of SMED30013129-orf-1 >SMED30013129-orf-1 ID=SMED30013129-orf-1|Name=SMED30013129-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=532bp MEFQLWIFWNFLSIFRWICQIHSSETRFHSSNEYELLKNASLTISNLMKNback to top Aliases
The feature 'Gamma-aminobutyric acid receptor subunit beta A' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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