Heterogeneous nuclear ribonucleoprotein Q

Overview
NameHeterogeneous nuclear ribonucleoprotein Q
Smed IDSMED30013109
Length (bp)1883
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Heterogeneous nuclear ribonucleoprotein Q (SMED30013109) t-SNE clustered cells

Violin plots show distribution of expression levels for Heterogeneous nuclear ribonucleoprotein Q (SMED30013109) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Heterogeneous nuclear ribonucleoprotein Q (SMED30013109) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Heterogeneous nuclear ribonucleoprotein Q (SMED30013109) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30013109

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30013109h1SMcG0011786 dd_Smed_v4_10996_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30013109h1SMcG0011786 dd_Smed_v4_10996_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30013109h1SMcG0011786 dd_Smed_v4_10996_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
anterior sideSMED30013109h1SMcG0011786 dd_Smed_v4_10996_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Human
Match: A1CF (APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086])

HSP 1 Score: 212.231 bits (539), Expect = 4.246e-60
Identity = 118/307 (38.44%), Postives = 175/307 (57.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y   +   +  YG PPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NKV A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   17 EAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 303
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Human
Match: A1CF (APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086])

HSP 1 Score: 212.231 bits (539), Expect = 4.246e-60
Identity = 118/307 (38.44%), Postives = 175/307 (57.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y   +   +  YG PPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NKV A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   17 EAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 303
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Human
Match: A1CF (APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086])

HSP 1 Score: 212.231 bits (539), Expect = 4.246e-60
Identity = 118/307 (38.44%), Postives = 175/307 (57.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y   +   +  YG PPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NKV A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   17 EAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 303
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Human
Match: A1CF (APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086])

HSP 1 Score: 212.231 bits (539), Expect = 5.699e-60
Identity = 118/307 (38.44%), Postives = 175/307 (57.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y   +   +  YG PPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NKV A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   17 EAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 303
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Human
Match: A1CF (APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086])

HSP 1 Score: 210.69 bits (535), Expect = 1.981e-59
Identity = 114/282 (40.43%), Postives = 167/282 (59.22%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            GPPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NKV A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   50 GPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 311
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Celegans
Match: hrp-2 (HnRNP A1 homolog [Source:UniProtKB/TrEMBL;Acc:B3KYC2])

HSP 1 Score: 180.644 bits (457), Expect = 6.159e-49
Identity = 90/276 (32.61%), Postives = 161/276 (58.33%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHA---NEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTI 999
            GPPP+W       A   +E+++G +P DV    L+ L E +     I++L +M+D     S       RG+AFVT+ NK  AA   +  D  EI  GK +++N S  N  LF+ N+P  K+++E+L +L+   +G+VDV++++      + +  ++RGF F+++  H  A++ +RK+++   R +N ++ VDWA  ++EP ++ MSKVK +Y+RN+    T++ L + F +Y  ++ +KKV+D+AFIHF +R   + A++  N   L   +   ++
Sbjct:  183 GPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKS---GKIWDLRLMMDPMSGAS-------RGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP----DNEKIKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASL 444
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Celegans
Match: hrp-2 (HnRNP A1 homolog [Source:UniProtKB/TrEMBL;Acc:B3KYC2])

HSP 1 Score: 180.644 bits (457), Expect = 6.159e-49
Identity = 90/276 (32.61%), Postives = 161/276 (58.33%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHA---NEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTI 999
            GPPP+W       A   +E+++G +P DV    L+ L E +     I++L +M+D     S       RG+AFVT+ NK  AA   +  D  EI  GK +++N S  N  LF+ N+P  K+++E+L +L+   +G+VDV++++      + +  ++RGF F+++  H  A++ +RK+++   R +N ++ VDWA  ++EP ++ MSKVK +Y+RN+    T++ L + F +Y  ++ +KKV+D+AFIHF +R   + A++  N   L   +   ++
Sbjct:  183 GPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKS---GKIWDLRLMMDPMSGAS-------RGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP----DNEKIKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASL 444
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8])

HSP 1 Score: 62.3882 bits (150), Expect = 4.813e-10
Identity = 55/250 (22.00%), Postives = 116/250 (46.40%), Query Frame = 1 
Query:  283 IESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAEC-----------RELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKK----QEPSQ-------EVMSKVK----SIYVRNLTSECTDQNLRDYFSQYGEIESIK--KVRDFAFIHFKDRSSAISAL 948
            ++ST+ E+ I  L   + +      +    N  +AFV F +   A++            RE+  N  + PG++     +T + H+FV ++ S  + ++L    + F D + D  +        + ++ + +G+ F+ Y     A  A  +++  G  L  R ++ +WA +K    ++PS        E+ ++      S+YV N+ S  T+  +R  F+ +G I  ++  K++ +AF+ F ++ +A  A+
Sbjct:   53 LDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGD-VSDAKVIR------DTNTTKSKGYGFVSYPKREEAERAIEQMN--GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 292
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8])

HSP 1 Score: 57.3806 bits (137), Expect = 1.233e-8
Identity = 44/191 (23.04%), Postives = 94/191 (49.21%), Query Frame = 1 
Query:  427 RELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKK----QEPSQ-------EVMSKVK----SIYVRNLTSECTDQNLRDYFSQYGEIESIK--KVRDFAFIHFKDRSSAISAL 948
            RE+  N  + PG++     +T + H+FV ++ S  + ++L    + F D + D  +        + ++ + +G+ F+ Y     A  A  +++  G  L  R ++ +WA +K    ++PS        E+ ++      S+YV N+ S  T+  +R  F+ +G I  ++  K++ +AF+ F ++ +A  A+
Sbjct:    9 REMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGD-VSDAKVIR------DTNTTKSKGYGFVSYPKREEAERAIEQMN--GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 189
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8])

HSP 1 Score: 56.225 bits (134), Expect = 3.803e-8
Identity = 43/190 (22.63%), Postives = 93/190 (48.95%), Query Frame = 1 
Query:  430 ELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKK----QEPSQ-------EVMSKVK----SIYVRNLTSECTDQNLRDYFSQYGEIESIK--KVRDFAFIHFKDRSSAISAL 948
            E+  N  + PG++     +T + H+FV ++ S  + ++L    + F D + D  +        + ++ + +G+ F+ Y     A  A  +++  G  L  R ++ +WA +K    ++PS        E+ ++      S+YV N+ S  T+  +R  F+ +G I  ++  K++ +AF+ F ++ +A  A+
Sbjct:   81 EMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGD-VSDAKVIR------DTNTTKSKGYGFVSYPKREEAERAIEQMN--GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 260
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Fly
Match: Syp (gene:FBgn0038826 transcript:FBtr0083961)

HSP 1 Score: 240.35 bits (612), Expect = 2.539e-71
Identity = 125/315 (39.68%), Postives = 192/315 (60.95%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            PD E K+ + L +  Y    +  +  YG PPP+W   +P +  EVF G +P+D+   EL+ L E+     II++L +M+D            NRG+AFVTF N+  A      LDN EI+PGK +++N S PNL LFV N+P  K ++E+L +  + T GL +V+I+++       D K++RGF FLEYE+H AA+ A+R+L     ++W  ++ VDWA  ++EP ++ MSKVK +YVRNLT + ++  L++ F QYG++E +KK++D+AFIHF+DR SA+ A+   N      +I    I+V L KP  + + K
Sbjct:  123 PD-EDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIPLFENC---GIIWDLRLMMDPMTGT-------NRGYAFVTFTNREAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPD-----DKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNG----KEIGASNIEVSLAKPPSDKKKK 417
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Fly
Match: Syp (gene:FBgn0038826 transcript:FBtr0113256)

HSP 1 Score: 240.35 bits (612), Expect = 2.575e-71
Identity = 125/315 (39.68%), Postives = 192/315 (60.95%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            PD E K+ + L +  Y    +  +  YG PPP+W   +P +  EVF G +P+D+   EL+ L E+     II++L +M+D            NRG+AFVTF N+  A      LDN EI+PGK +++N S PNL LFV N+P  K ++E+L +  + T GL +V+I+++       D K++RGF FLEYE+H AA+ A+R+L     ++W  ++ VDWA  ++EP ++ MSKVK +YVRNLT + ++  L++ F QYG++E +KK++D+AFIHF+DR SA+ A+   N      +I    I+V L KP  + + K
Sbjct:  128 PD-EDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIPLFENC---GIIWDLRLMMDPMTGT-------NRGYAFVTFTNREAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPD-----DKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNG----KEIGASNIEVSLAKPPSDKKKK 422
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Fly
Match: Syp (gene:FBgn0038826 transcript:FBtr0083963)

HSP 1 Score: 241.121 bits (614), Expect = 3.039e-71
Identity = 125/315 (39.68%), Postives = 192/315 (60.95%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            PD E K+ + L +  Y    +  +  YG PPP+W   +P +  EVF G +P+D+   EL+ L E+     II++L +M+D            NRG+AFVTF N+  A      LDN EI+PGK +++N S PNL LFV N+P  K ++E+L +  + T GL +V+I+++       D K++RGF FLEYE+H AA+ A+R+L     ++W  ++ VDWA  ++EP ++ MSKVK +YVRNLT + ++  L++ F QYG++E +KK++D+AFIHF+DR SA+ A+   N      +I    I+V L KP  + + K
Sbjct:  165 PD-EDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIPLFENC---GIIWDLRLMMDPMTGT-------NRGYAFVTFTNREAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPD-----DKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNG----KEIGASNIEVSLAKPPSDKKKK 459
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Fly
Match: Syp (gene:FBgn0038826 transcript:FBtr0334720)

HSP 1 Score: 240.736 bits (613), Expect = 4.179e-71
Identity = 125/315 (39.68%), Postives = 192/315 (60.95%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            PD E K+ + L +  Y    +  +  YG PPP+W   +P +  EVF G +P+D+   EL+ L E+     II++L +M+D            NRG+AFVTF N+  A      LDN EI+PGK +++N S PNL LFV N+P  K ++E+L +  + T GL +V+I+++       D K++RGF FLEYE+H AA+ A+R+L     ++W  ++ VDWA  ++EP ++ MSKVK +YVRNLT + ++  L++ F QYG++E +KK++D+AFIHF+DR SA+ A+   N      +I    I+V L KP  + + K
Sbjct:  123 PD-EDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIPLFENC---GIIWDLRLMMDPMTGT-------NRGYAFVTFTNREAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPD-----DKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNG----KEIGASNIEVSLAKPPSDKKKK 417
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Fly
Match: Syp (gene:FBgn0038826 transcript:FBtr0083958)

HSP 1 Score: 240.35 bits (612), Expect = 5.586e-71
Identity = 125/315 (39.68%), Postives = 192/315 (60.95%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            PD E K+ + L +  Y    +  +  YG PPP+W   +P +  EVF G +P+D+   EL+ L E+     II++L +M+D            NRG+AFVTF N+  A      LDN EI+PGK +++N S PNL LFV N+P  K ++E+L +  + T GL +V+I+++       D K++RGF FLEYE+H AA+ A+R+L     ++W  ++ VDWA  ++EP ++ MSKVK +YVRNLT + ++  L++ F QYG++E +KK++D+AFIHF+DR SA+ A+   N      +I    I+V L KP  + + K
Sbjct:  157 PD-EDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIPLFENC---GIIWDLRLMMDPMTGT-------NRGYAFVTFTNREAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPD-----DKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNG----KEIGASNIEVSLAKPPSDKKKK 451
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Zebrafish
Match: rbm47 (RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612])

HSP 1 Score: 224.172 bits (570), Expect = 1.466e-64
Identity = 118/312 (37.82%), Postives = 176/312 (56.41%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + ++ YG  +   +  YGPPP W    P    E+F+G +PRDV   EL+ + ES      IYE+ +M+D           +NRG+AFV +  K  A      L+N EIRPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E +++ LR  F Q+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   44 EAALVSLMERSGYGMVQENGQRKYGPPPGWQGTSPPRGCEIFVGKIPRDVYEDELVPVFESV---GRIYEMRLMMDFDG--------KNRGYAFVMYTQKHEAKRAVRELNNFEIRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETSEEILRQTFGQFNPGCVERVKKIRDYAFVHFASRDDAVVAMDNLNGT----EIEGSRIEVTLAKPVDKEQY 335
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Zebrafish
Match: a1cf (apobec1 complementation factor [Source:ZFIN;Acc:ZDB-GENE-060824-3])

HSP 1 Score: 211.075 bits (536), Expect = 7.946e-60
Identity = 117/307 (38.11%), Postives = 173/307 (56.35%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y  ++   +  YG PPP W    P   +E+F+G LPRD+   EL+ L E   G+  IYE+ +M+D + N        NRG+AFVTF  K  A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ TDG++DV+++ +       D  ++RGF F+EYETH AAA ARRKL     +LW   + VDWA  + E  ++ M+ VK +YVRNL    T++ +   F+    G +E +KK+RD+AF+HF  R  AI+A++  N  V    I    I+V L KP
Sbjct:   17 EAALRALIQRTGYHIHQENGQRRYGGPPPGWEGSPPERGSEIFVGKLPRDLFEDELVPLCEK-FGK--IYEVRMMMDFNGN--------NRGYAFVTFSTKQEAKNAMKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILAEMKKVTDGVLDVIVYPSAA-----DKAKNRGFAFVEYETHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMATVKILYVRNLMLPTTEETIEKEFNSIKPGAVERVKKIRDYAFVHFSQREDAINAMNALNGKV----IDGSPIEVTLAKP 303
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Zebrafish
Match: a1cf (apobec1 complementation factor [Source:ZFIN;Acc:ZDB-GENE-060824-3])

HSP 1 Score: 211.075 bits (536), Expect = 7.946e-60
Identity = 117/307 (38.11%), Postives = 173/307 (56.35%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y  ++   +  YG PPP W    P   +E+F+G LPRD+   EL+ L E   G+  IYE+ +M+D + N        NRG+AFVTF  K  A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ TDG++DV+++ +       D  ++RGF F+EYETH AAA ARRKL     +LW   + VDWA  + E  ++ M+ VK +YVRNL    T++ +   F+    G +E +KK+RD+AF+HF  R  AI+A++  N  V    I    I+V L KP
Sbjct:   17 EAALRALIQRTGYHIHQENGQRRYGGPPPGWEGSPPERGSEIFVGKLPRDLFEDELVPLCEK-FGK--IYEVRMMMDFNGN--------NRGYAFVTFSTKQEAKNAMKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILAEMKKVTDGVLDVIVYPSAA-----DKAKNRGFAFVEYETHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMATVKILYVRNLMLPTTEETIEKEFNSIKPGAVERVKKIRDYAFVHFSQREDAINAMNALNGKV----IDGSPIEVTLAKP 303
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Zebrafish
Match: hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766])

HSP 1 Score: 201.06 bits (510), Expect = 9.244e-56
Identity = 113/310 (36.45%), Postives = 176/310 (56.77%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF +K  A E  +L DN EIR GK + +  S  N  LFV ++P  K RE +L D  + T+GL +V+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA    EP  E+M+KVK ++VR L +  T++ L   FSQ+G++E +KK++D+AF+HF++R +A+ A+   N      ++    I++ L KP
Sbjct:  127 PD-ETKIKALLDRTGYTLDVTTGQRKYGGPPPDAVFSGPQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GSIWDLRLMMDPLTG-------QNRGYAFITFCSKDAAQEAVKLCDNYEIRSGKYLGVCISVANNRLFVGSIPKNKTRESILEDFGKVTEGLQEVILYTQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNPVTVEWADPVAEPDPEIMAKVKVLFVRKLATPVTEELLEKTFSQFGKLERVKKLKDYAFVHFEERDAAVKAMQEMNG----KELGGEEIEIVLAKP 416
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Zebrafish
Match: hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766])

HSP 1 Score: 200.675 bits (509), Expect = 9.963e-56
Identity = 113/310 (36.45%), Postives = 176/310 (56.77%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF +K  A E  +L DN EIR GK + +  S  N  LFV ++P  K RE +L D  + T+GL +V+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA    EP  E+M+KVK ++VR L +  T++ L   FSQ+G++E +KK++D+AF+HF++R +A+ A+   N      ++    I++ L KP
Sbjct:  121 PD-ETKIKALLDRTGYTLDVTTGQRKYGGPPPDAVFSGPQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GSIWDLRLMMDPLTG-------QNRGYAFITFCSKDAAQEAVKLCDNYEIRSGKYLGVCISVANNRLFVGSIPKNKTRESILEDFGKVTEGLQEVILYTQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNPVTVEWADPVAEPDPEIMAKVKVLFVRKLATPVTEELLEKTFSQFGKLERVKKLKDYAFVHFEERDAAVKAMQEMNG----KELGGEEIEIVLAKP 410
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Xenopus
Match: tom1 (target of myb1 membrane trafficking protein [Source:Xenbase;Acc:XB-GENE-5834946])

HSP 1 Score: 210.69 bits (535), Expect = 9.529e-61
Identity = 109/288 (37.85%), Postives = 166/288 (57.64%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            GPPP W    P    EVF+G +PRDV   EL+ + ES      I+E+ +M+D           +NRG+AFV F  K  A +    L+N EIRPG+ + +  S  N  LF+  +P +K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E ++  ++  F Q+  G +E +KK+RD+AF+HF  R  A+ ++   N T    ++    I+V L KP    QY
Sbjct:   57 GPPPGWEGSPPPRGCEVFVGKIPRDVYEDELVPVFESA---GRIFEMRLMMDFDG--------KNRGYAFVMFTKKHEAKQAVRELNNYEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEISKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETSEDTIKKIFGQFNPGCVERVKKIRDYAFVHFSSREDAVQSMRKLNGT----ELEGSCIEVTLAKPVDKEQY 324
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Xenopus
Match: tom1 (target of myb1 membrane trafficking protein [Source:Xenbase;Acc:XB-GENE-5834946])

HSP 1 Score: 211.846 bits (538), Expect = 1.543e-60
Identity = 109/288 (37.85%), Postives = 166/288 (57.64%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            GPPP W    P    EVF+G +PRDV   EL+ + ES      I+E+ +M+D           +NRG+AFV F  K  A +    L+N EIRPG+ + +  S  N  LF+  +P +K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E ++  ++  F Q+  G +E +KK+RD+AF+HF  R  A+ ++   N T    ++    I+V L KP    QY
Sbjct:   57 GPPPGWEGSPPPRGCEVFVGKIPRDVYEDELVPVFESA---GRIFEMRLMMDFDG--------KNRGYAFVMFTKKHEAKQAVRELNNYEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEISKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETSEDTIKKIFGQFNPGCVERVKKIRDYAFVHFSSREDAVQSMRKLNGT----ELEGSCIEVTLAKPVDKEQY 324
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Xenopus
Match: tom1 (target of myb1 membrane trafficking protein [Source:Xenbase;Acc:XB-GENE-5834946])

HSP 1 Score: 211.846 bits (538), Expect = 2.697e-60
Identity = 113/313 (36.10%), Postives = 174/313 (55.59%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + +  Y   +   +  YG PPP W    P    EVF+G +PRDV   EL+ + ES      I+E+ +M+D           +NRG+AFV F  K  A +    L+N EIRPG+ + +  S  N  LF+  +P +K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E ++  ++  F Q+  G +E +KK+RD+AF+HF  R  A+ ++   N T    ++    I+V L KP    QY
Sbjct:   32 EAALINLMERTGYTMVQENGQRKYGGPPPGWEGSPPPRGCEVFVGKIPRDVYEDELVPVFESA---GRIFEMRLMMDFDG--------KNRGYAFVMFTKKHEAKQAVRELNNYEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEISKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETSEDTIKKIFGQFNPGCVERVKKIRDYAFVHFSSREDAVQSMRKLNGT----ELEGSCIEVTLAKPVDKEQY 324
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Xenopus
Match: HNRNPR (heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:734078])

HSP 1 Score: 210.69 bits (535), Expect = 3.487e-60
Identity = 120/310 (38.71%), Postives = 178/310 (57.42%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNW--NDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            PD E K+   L +  Y    +  +  YG PPP    +   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF NK  A E  +L DN EIRPGK I +  S  N  LFV ++P  K +E +L +  + T+GLVDV+++         D K++RGF FLEYE H  AA ARR+L     ++W   + V+WA   +EP  E+M+KVK ++VRNL+S  T++ L   FS +G++E +KK++D+AF+HF +R +A+ A+D  N T L  +     I++ L KP
Sbjct:   21 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPESVSSGAQPGIGTEVFVGKIPRDLFEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCNKEAAQEAVKLCDNYEIRPGKHIGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD-----DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEIMAKVKVLFVRNLSSTVTEEILEKAFSVFGKLERVKKLKDYAFVHFDERDAAVRAMDEMNGTELEGE----EIEIVLAKP 310
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Xenopus
Match: tom1 (target of myb1 membrane trafficking protein [Source:Xenbase;Acc:XB-GENE-5834946])

HSP 1 Score: 212.231 bits (539), Expect = 4.154e-60
Identity = 109/288 (37.85%), Postives = 166/288 (57.64%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            GPPP W    P    EVF+G +PRDV   EL+ + ES      I+E+ +M+D           +NRG+AFV F  K  A +    L+N EIRPG+ + +  S  N  LF+  +P +K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E ++  ++  F Q+  G +E +KK+RD+AF+HF  R  A+ ++   N T    ++    I+V L KP    QY
Sbjct:   57 GPPPGWEGSPPPRGCEVFVGKIPRDVYEDELVPVFESA---GRIFEMRLMMDFDG--------KNRGYAFVMFTKKHEAKQAVRELNNYEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEISKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETSEDTIKKIFGQFNPGCVERVKKIRDYAFVHFSSREDAVQSMRKLNGT----ELEGSCIEVTLAKPVDKEQY 324
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Mouse
Match: Hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:MGI Symbol;Acc:MGI:1891692])

HSP 1 Score: 207.608 bits (527), Expect = 5.943e-59
Identity = 112/290 (38.62%), Postives = 172/290 (59.31%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSN 960
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF  K  A E  +L D+ EIRPGK + +  S  N  LFV ++P  K +E +L +  + T+GLVDV+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA   +EP  EVM+KVK ++VRNL +  T++ L   FS++G++E +KK++D+AF+HF+DR +A+ A+D  N
Sbjct:   21 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMN 294
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Mouse
Match: Hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:MGI Symbol;Acc:MGI:1891692])

HSP 1 Score: 207.608 bits (527), Expect = 5.943e-59
Identity = 112/290 (38.62%), Postives = 172/290 (59.31%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSN 960
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF  K  A E  +L D+ EIRPGK + +  S  N  LFV ++P  K +E +L +  + T+GLVDV+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA   +EP  EVM+KVK ++VRNL +  T++ L   FS++G++E +KK++D+AF+HF+DR +A+ A+D  N
Sbjct:   21 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMN 294
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Mouse
Match: Hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:MGI Symbol;Acc:MGI:1891692])

HSP 1 Score: 206.838 bits (525), Expect = 5.805e-58
Identity = 112/290 (38.62%), Postives = 172/290 (59.31%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSN 960
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF  K  A E  +L D+ EIRPGK + +  S  N  LFV ++P  K +E +L +  + T+GLVDV+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA   +EP  EVM+KVK ++VRNL +  T++ L   FS++G++E +KK++D+AF+HF+DR +A+ A+D  N
Sbjct:  122 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMN 395
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Mouse
Match: Hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:MGI Symbol;Acc:MGI:1891692])

HSP 1 Score: 206.838 bits (525), Expect = 5.805e-58
Identity = 112/290 (38.62%), Postives = 172/290 (59.31%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSN 960
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF  K  A E  +L D+ EIRPGK + +  S  N  LFV ++P  K +E +L +  + T+GLVDV+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA   +EP  EVM+KVK ++VRNL +  T++ L   FS++G++E +KK++D+AF+HF+DR +A+ A+D  N
Sbjct:  122 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMN 395
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Mouse
Match: Syncrip (synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690])

HSP 1 Score: 202.601 bits (514), Expect = 9.176e-58
Identity = 115/310 (37.10%), Postives = 175/310 (56.45%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            PD E K+   L +  Y    +  +  YG PPP+  ++ Q P+   E+F+G +PRD+   EL+ L E       I++L +M+D            NRG+AFVTF  K  A E  +L +N EIR GK I +  S  N  LFV ++P  K +E++L +  + T+GL DV+++         D K++RGF FLEYE H  AA ARR+L     ++W     V+WA   ++P  EVM+KVK ++VRNL +  T++ L   FSQ+G++E +KK++D+AFIHF +R  A+ A++  N      D+    I++   KP
Sbjct:   21 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKA---GPIWDLRLMMDPLTGL-------NRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPD-----DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNG----KDLEGENIEIVFAKP 310
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. UniProt/SwissProt
Match: sp|Q9NQ94|A1CF_HUMAN (APOBEC1 complementation factor OS=Homo sapiens OX=9606 GN=A1CF PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.737e-59
Identity = 118/307 (38.44%), Postives = 175/307 (57.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y   +   +  YG PPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NKV A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   17 EAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 303
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. UniProt/SwissProt
Match: sp|Q5R9H4|A1CF_PONAB (APOBEC1 complementation factor OS=Pongo abelii OX=9601 GN=A1CF PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.579e-59
Identity = 117/307 (38.11%), Postives = 175/307 (57.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFS--QYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  Y   +   +  YG PPP W+   P    E+FIG LPRD+   EL+ L E  +G+  IYE+ +M+D + N        NRG+AFVTF NK+ A    + L+N EIR G+ + +  S  N  LFV  +P  K REE+L ++++ T+G+VDV+++ +       D  ++RGF F+EYE+H AAA ARRKL     +LW   + VDWA  + E  ++ MS VK +YVRNL    +++ +   F+  + G +E +KK+RD+AF+HF +R  A+ A+   N  VL        I+V L KP
Sbjct:   17 EAALRALIQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEK-IGK--IYEMRMMMDFNGN--------NRGYAFVTFSNKLEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAA-----DKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVL----DGSPIEVTLAKP 303
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. UniProt/SwissProt
Match: sp|O43390|HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.088e-57
Identity = 112/290 (38.62%), Postives = 172/290 (59.31%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSN 960
            PD E K+   L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF  K  A E  +L D+ EIRPGK + +  S  N  LFV ++P  K +E +L +  + T+GLVDV+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA   +EP  EVM+KVK ++VRNL +  T++ L   FS++G++E +KK++D+AF+HF+DR +A+ A+D  N
Sbjct:  122 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMN 395
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. UniProt/SwissProt
Match: sp|Q7TP47|HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.068e-56
Identity = 112/303 (36.96%), Postives = 173/303 (57.10%), Query Frame = 1 
Query:  118 LNEKLAKNHYGFYKSRSEIHYGPPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            L +K+A+     Y +    + GPPP+  ++ Q P+   E+F+G +PRD+   EL+ L E       I++L +M+D            NRG+AFVTF  K  A E  +L +N EIR GK I +  S  N  LFV ++P  K +E++L +  + T+GL DV+++         D K++RGF FLEYE H  AA ARR+L     ++W     V+WA   ++P  EVM+KVK ++VRNL +  T++ L   FSQ+G++E +KK++D+AFIHF +R  A+ A++  N      D+    I++   KP
Sbjct:   35 LPQKVAEKLDEIYVAGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKA---GPIWDLRLMMDPLTGL-------NRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPD-----DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNG----KDLEGENIEIVFAKP 318
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. UniProt/SwissProt
Match: sp|O60506|HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.009e-55
Identity = 115/310 (37.10%), Postives = 175/310 (56.45%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            PD E K+   L +  Y    +  +  YG PPP+  ++ Q P+   E+F+G +PRD+   EL+ L E       I++L +M+D            NRG+AFVTF  K  A E  +L +N EIR GK I +  S  N  LFV ++P  K +E++L +  + T+GL DV+++         D K++RGF FLEYE H  AA ARR+L     ++W     V+WA   ++P  EVM+KVK ++VRNL +  T++ L   FSQ+G++E +KK++D+AFIHF +R  A+ A++  N      D+    I++   KP
Sbjct:  119 PD-EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKA---GPIWDLRLMMDPLTGL-------NRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPD-----DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNG----KDLEGENIEIVFAKP 408
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. TrEMBL
Match: A0A2S2PGY7 (Heterogeneous nuclear ribonucleoprotein Q OS=Schizaphis graminum OX=13262 GN=Syncrip_0 PE=4 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 6.185e-70
Identity = 124/309 (40.13%), Postives = 187/309 (60.52%), Query Frame = 1 
Query:  115 KLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            K+ E LA+ +Y F  +  +  YGPPP+W D  P    EVF G LP  V   EL+ L E       IY+L +M+D            NRG+AFVT+  K  A      LD  EI+PGK I++N S PNL LF+ N+P  K +E+++ +  + T GL +V+I+++       D +++RGF FLEY++H AA+ A+R+LS P +++W  ++ VDWA  ++EP  E MSKVK +YVRNLT E T+  L++ F  +G +E +KK++D+AFIHF DR  A+ AL++ N +    ++   T++V L KP  + + K
Sbjct:  123 KVKEILARTNYKFDVTTGQRKYGPPPDWTDPKPTAGCEVFCGKLPNIVFEDELIPLFEKC---GKIYDLRLMMDPLSGT-------NRGYAFVTYTTKEEAERATVELDGYEIKPGKNIKVNISVPNLRLFIGNIPKSKGKEDIMEEFGKITSGLTEVIIYSSPD-----DRRKNRGFCFLEYDSHKAASVAKRRLSAPNYKVWGCDIIVDWADPQEEPDDETMSKVKVLYVRNLTQEVTENRLKETFEAHGSVERVKKIKDYAFIHFNDRGCALKALEILNGS----NLDGATLEVSLAKPPSDKKKK 412
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. TrEMBL
Match: A0A2H8TMH2 (Heterogeneous nuclear ribonucleoprotein Q OS=Melanaphis sacchari OX=742174 GN=Syncrip_1 PE=4 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.193e-69
Identity = 125/309 (40.45%), Postives = 186/309 (60.19%), Query Frame = 1 
Query:  115 KLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            K+ E LA+ +Y F  +  +  YGPPP+W D  P    EVF G LP  V   EL+ L E       IY+L +M+D            NRG+AFVT+  K  A      LD  EI+ GK I++N S PNL LF+ N+P  K +E+++ +  + T+GL +V+I+++       D +++RGF FLEYE+H AA+ A+R+LS P +++W  ++ VDWA  ++EP  E MSKVK +YVRNLT E T+  L++ F  YG +E +KK++D+AFIHF DR  A+ AL+  N +    ++   T++V L KP  + + K
Sbjct:  123 KVKEILARTNYKFDVTTGQRKYGPPPDWTDPKPTAGCEVFCGKLPNIVFEDELIPLFEKC---GKIYDLRLMMDPLSGT-------NRGYAFVTYTTKEEAERATVELDGYEIKSGKNIKVNISVPNLRLFIGNIPKSKGKEDIMEEFGKITNGLTEVIIYSSPD-----DRRKNRGFCFLEYESHKAASVAKRRLSAPNYKVWGCDIIVDWADPQEEPDDETMSKVKVLYVRNLTQEVTENRLKETFEAYGSVERVKKIKDYAFIHFNDRGCALKALEALNGS----NLDGATLEVSLAKPPSDKKKK 412
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. TrEMBL
Match: J9K1U6 (Uncharacterized protein OS=Acyrthosiphon pisum OX=7029 GN=100165814 PE=4 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 2.720e-69
Identity = 124/309 (40.13%), Postives = 186/309 (60.19%), Query Frame = 1 
Query:  115 KLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            K+ E LA+ +Y F  +  +  YGPPP+W D  P    EVF G LP  V   EL+ L E       IY+L +M+D            NRG+AFVT+  K  A      LD  EI+PGK I++N S PNL LF+ N+P  K +E+++ +  + T GL +V+I+++       D +++RGF FLEY++H AA+ A+R+LS P +++W  ++ VDWA  ++EP  E MSKVK +YVRNLT E T+  L++ F  +G +E +KK++D+AFIHF DR  A+ AL+  N +    ++   T++V L KP  + + K
Sbjct:  123 KVKEILARTNYKFDVTTGQRKYGPPPDWTDPKPTAGCEVFCGKLPNTVFEDELIPLFEKC---GKIYDLRLMMDPLSGT-------NRGYAFVTYTTKEEAERATVELDGYEIKPGKNIKVNISVPNLRLFIGNIPKSKGKEDIMEEFGKITSGLTEVIIYSSPD-----DRRKNRGFCFLEYDSHKAASVAKRRLSAPNYKVWGCDIIVDWADPQEEPDDETMSKVKVLYVRNLTQEVTENRLKETFEVHGSVERVKKIKDYAFIHFNDRGCALKALEELNGS----NLDGATLEVSLAKPPSDKKKK 412
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. TrEMBL
Match: A0A2S2PZ73 (Heterogeneous nuclear ribonucleoprotein Q OS=Sipha flava OX=143950 GN=Syncrip_0 PE=4 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 4.713e-69
Identity = 124/309 (40.13%), Postives = 186/309 (60.19%), Query Frame = 1 
Query:  115 KLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            K+ E L + +Y F  +  +  YGPPP+W D  P    EVF G LP  V   EL+ L E       IY+L +M+D            NRG+AFVT+  K  A +    LD  EI+PGK I++N S PNL LF+ N+P  K +E+++ +  + T GL +V+I+++       D +++RGF FLEY++H AA+ A+R+LS P +++W  ++ VDWA  ++EP  E MSKVK +YVRNLT E T+  L++ F  YG +E +KK++D+AFIHF DR  A+ AL+  N +    ++   T++V L KP  + + K
Sbjct:  122 KVKEILNRTNYKFDVTTGQRKYGPPPDWTDPKPTAGCEVFCGKLPNTVFEDELIPLFEKC---GKIYDLRLMMDPLSG-------TNRGYAFVTYTTKEEAEKATIELDGYEIKPGKIIKVNISVPNLRLFIGNIPKSKGKEDIMEEFGKITSGLTEVIIYSSPD-----DRRKNRGFCFLEYDSHKAASVAKRRLSAPNYKVWGCDIIVDWADPQEEPDDETMSKVKVLYVRNLTQEVTENRLKETFEAYGSVERVKKIKDYAFIHFNDRGCALKALEELNGS----NLDGATLEVSLAKPPSDKKKK 411
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. TrEMBL
Match: A0A0A1XRT5 (Heterogeneous nuclear ribonucleoprotein Q (Fragment) OS=Zeugodacus cucurbitae OX=28588 GN=Syncrip_3 PE=4 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.178e-68
Identity = 123/315 (39.05%), Postives = 193/315 (61.27%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYK 1041
            PD E K+ + L +  Y    +  +  YG PPPNW+   P +  EVF G +P+D+   E++ L E       I++L +M+D            NRG+AFVTF  +  A+     LDN EI+PGK +++N S PNL LFV N+P  K +EE+L +  + T GL++V+I+++       D K++RGF FLEYE+H AA+ A+R+L     ++W  ++ VDWA  ++EP ++ MSKVK +YVRNLT + +++ L++ F QYG++E +KK++D+AF+HF+DR SA+ A+   N      +I +  I+V L KP  + + K
Sbjct:   21 PDEE-KIKKILERTGYSLDVTTGQRKYGGPPPNWDGPTPGNGCEVFCGKIPKDMFEDEIIPLFEEC---GTIWDLRLMMDPMTGT-------NRGYAFVTFTTREAASNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKEEILDEFGKLTAGLIEVIIYSSPD-----DKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEEKLKEQFEQYGKVERVKKIKDYAFVHFEDRESAVIAMRGLNG----KEIGSSNIEVSLAKPPSDKKKK 315
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Cavefish
Match: rbm47 (RNA binding motif protein 47 [Source:NCBI gene;Acc:103026221])

HSP 1 Score: 217.238 bits (552), Expect = 4.293e-62
Identity = 115/312 (36.86%), Postives = 174/312 (55.77%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + ++ Y   +   +  YGPPP W    P    E+F+G +PRDV   EL+ + E       IYE+ +M+D           +NRG+AFV +  K  A      L+N E+RPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E +++ LR  F Q+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   44 ESALLALMERSGYRMVQENGQRKYGPPPGWQGPSPPRGCEIFVGKIPRDVYEDELVPVFEMV---GRIYEMRLMMDFDG--------KNRGYAFVMYTQKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILDEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETSEEILRQTFGQFNPGCVERVKKIRDYAFVHFTSRDDAVVAMDNLNGT----EIEGSCIEVTLAKPVDKEQY 335
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Cavefish
Match: hnrnpr (heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:103029778])

HSP 1 Score: 206.068 bits (523), Expect = 9.290e-58
Identity = 115/310 (37.10%), Postives = 177/310 (57.10%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            PD E K+   L +  Y    +  +  YG PPP   ++   P    EVF+G +PRD+   EL+ L E       I++L +M+D           +NRG+AF+TF +K  A E  +L DN EIRPGK + +  S  N  LFV ++P  K RE +L D  + T+GL +V+++         D K++RGF FLEYE H +AA ARR+L     ++W   + V+WA    EP  EVM+KVK ++VR L +  T++ L   FSQ+G++E +KK++D+AF+HF++R +A+ A++  N      ++    I++ L KP
Sbjct:  121 PD-ESKIKALLERTGYTLDVTTGQRKYGGPPPEEVFSGTQPGIGTEVFVGKIPRDLYEDELVPLFEKA---GPIWDLRLMMDPLSG-------QNRGYAFITFCSKEAAQEAVKLCDNYEIRPGKYLGVCISVANNRLFVGSIPKNKTRESILEDFGKVTEGLQEVILYTQAD-----DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNPVTVEWADPVAEPDPEVMAKVKVLFVRKLATPVTEELLEKTFSQFGKLERVKKLKDYAFVHFEERDAAVKAMEEMNG----KELGGEEIEIVLAKP 410
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Cavefish
Match: rbm46 (RNA binding motif protein 46 [Source:NCBI gene;Acc:566042])

HSP 1 Score: 200.675 bits (509), Expect = 2.103e-57
Identity = 109/282 (38.65%), Postives = 160/282 (56.74%), Query Frame = 1 
Query:  181 GPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            GPPP W    P    EVF+G +PRD+   EL+ + E       +YE  +M++ S          NRG+AFV +  +  A     LLDN EI PGK I +  S  N  LF+ ++P  K +EE+  ++ + TDG+VDV+++ + T     D  ++RGF F+EYE+H AAA ARRKL    F+LW   L+V WA  +++  +E M +V+ +YVRNL    T++ LR  FS+   G +E +KK+ D+AFIHF  R  A++A +  N  +    I    I+V L KP
Sbjct:   39 GPPPGWEGLPPPRGCEVFVGKIPRDIYEDELVPVFERA---GRMYEFRLMMEFSGE--------NRGYAFVRYTTQEAAQRAINLLDNYEIHPGKFIGVCVSLDNCRLFIGSLPKDKTKEEIQEEMMKVTDGVVDVIVYPSTT-----DKSKNRGFAFVEYESHKAAAMARRKLIPETFQLWGHTLQVHWAEPEKDVDEETMQRVRVLYVRNLMLHTTEETLRLEFSRQKPGSVERVKKLTDYAFIHFHSREDALAAQESMNGKL----IDGSPIEVSLAKP 300
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Cavefish
Match: syncripl (heterogeneous nuclear ribonucleoprotein Q [Source:NCBI gene;Acc:103026145])

HSP 1 Score: 201.83 bits (512), Expect = 4.064e-57
Identity = 117/313 (37.38%), Postives = 176/313 (56.23%), Query Frame = 1 
Query:   91 NDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPP---NWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            N  PD E K+   L +  Y    +  +  YG PP     +   P+   E+F+G +PRD+   EL+ L E       I++L +M+D     S L    NRG+AFVTF  K  A E  +L +N EIRPGK I +  S  N  LFV ++P  K +E+++ +  + T+GL DV+++         D K++RGF FLEYE H  AA ARR+L     ++W   + V+WA   ++P  EVM+KVK ++VRNL S  +++ L   FSQ+G++E +KK++D+AFIHF++R  A+ AL   N      D+    I++   KP
Sbjct:   76 NKGPD-EAKIKALLERTGYTLDVTTGQRKYGGPPPESTHSGAQPSVGTEIFVGKIPRDLFEDELVPLFEKA---GPIWDLRLMMDP---LSGL----NRGYAFVTFCTKEAAQEAVKLCNNNEIRPGKHIGVCISVANNRLFVGSIPKSKTKEQIVDEFAKVTEGLNDVILYHQPD-----DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLASTVSEELLEKTFSQFGKLERVKKLKDYAFIHFEERDGAVKALAEMNG----KDLEGEQIEIVFAKP 368
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Cavefish
Match: syncripl (heterogeneous nuclear ribonucleoprotein Q [Source:NCBI gene;Acc:103026145])

HSP 1 Score: 201.83 bits (512), Expect = 1.047e-56
Identity = 117/313 (37.38%), Postives = 176/313 (56.23%), Query Frame = 1 
Query:   91 NDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPP---NWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            N  PD E K+   L +  Y    +  +  YG PP     +   P+   E+F+G +PRD+   EL+ L E       I++L +M+D     S L    NRG+AFVTF  K  A E  +L +N EIRPGK I +  S  N  LFV ++P  K +E+++ +  + T+GL DV+++         D K++RGF FLEYE H  AA ARR+L     ++W   + V+WA   ++P  EVM+KVK ++VRNL S  +++ L   FSQ+G++E +KK++D+AFIHF++R  A+ AL   N      D+    I++   KP
Sbjct:  116 NKGPD-EAKIKALLERTGYTLDVTTGQRKYGGPPPESTHSGAQPSVGTEIFVGKIPRDLFEDELVPLFEKA---GPIWDLRLMMDP---LSGL----NRGYAFVTFCTKEAAQEAVKLCNNNEIRPGKHIGVCISVANNRLFVGSIPKSKTKEQIVDEFAKVTEGLNDVILYHQPD-----DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLASTVSEELLEKTFSQFGKLERVKKLKDYAFIHFEERDGAVKALAEMNG----KDLEGEQIEIVFAKP 408
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Sea Lamprey
Match: syncripl (synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104])

HSP 1 Score: 206.068 bits (523), Expect = 2.462e-58
Identity = 112/301 (37.21%), Postives = 175/301 (58.14%), Query Frame = 1 
Query:   88 VNDIPDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPN--WNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPND 981
             N  PD E K+ E L +  Y    +  +  YG PPP+  ++   P    EVF+G +PRD+    L+ L E       I++L +M+D            NRG+AF+T+ +K  A E  +L DN EIRPGK + +  S  N  LFV ++P  K +E+++ + ++ T+GL DV+++         D +R+RGF FLE+E H  AA ARR+L     +++   + V+WA   +EP  E+MSKVK ++VRNL S  T++ L+D FS +G++E +KK++D+AF+HF+DR  A+ A+D  N   L  +
Sbjct:  123 TNKGPD-EAKIKELLERTGYTLDVTTGQRKYGGPPPDPVYSGPQPGTGTEVFVGKIPRDLFEDTLVPLFEKA---GPIWDLRLMMDPLTGL-------NRGYAFLTYCSKDAALEAVKLCDNYEIRPGKHVGVCLSVANNRLFVGSIPKSKTKEQIMEEFQDITEGLTDVILYQQVE-----DKRRNRGFCFLEFEDHKTAAQARRRLMSGKIKVFGIPVSVEWADPIEEPDPEIMSKVKVLFVRNLASAVTEEILQDTFSVFGKLERVKKLKDYAFVHFEDRDDAVKAMDEMNGKPLEGE 407
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009756.1 (pep scaffold:Pmarinus_7.0:GL478948:7772:26420:1 gene:ENSPMAG00000008818.1 transcript:ENSPMAT00000009756.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 118.627 bits (296), Expect = 6.555e-30
Identity = 79/220 (35.91%), Postives = 121/220 (55.00%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQE 768
            E  L + + +  Y   +   +  +GPPP+W    P    EVF+G +PRD+   EL+ ++E T+G+  +Y L +M++ S          NRG+AF T+  +  A +  + L+N EIRPG  I +  S  N  L++  +P  K +EE++  +   T G+VDV +    T     D  R+RG+ F+EYE+H AAA ARRKL    F LW   +KVDWA  K++
Sbjct:    2 EEALLDLMLRTGYNMIQENGQRKFGPPPDWQGPPPARGCEVFLGKIPRDLYEDELVPVLE-TVGK--LYLLRLMMEFSGE--------NRGYAFATYTTRTHAEDAIKKLNNFEIRPGCAIGVCISVDNCRLYIGGLPKDKTQEEVMLAMSCATMGVVDVKMSVCPT-----DKTRNRGYAFVEYESHRAAAMARRKLVPETFELWGHTIKVDWADPKRD 205
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003808.1 (pep scaffold:Pmarinus_7.0:GL483076:13225:15644:1 gene:ENSPMAG00000003482.1 transcript:ENSPMAT00000003808.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 95.1301 bits (235), Expect = 7.681e-23
Identity = 62/163 (38.04%), Postives = 94/163 (57.67%), Query Frame = 1 
Query:  226 EVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPG 714
            EVF+G +PRD+   EL+ ++E T+G   +Y+L +M++ S          NRG+AF T+  +   A  ++ L+N EIRPG    +  S  N  L++  +P  K +EE++  +   T G+VDV +    T     D  R+RG+ F+EYE+H AAA ARRKL  PG
Sbjct:   44 EVFLGKIPRDLYEDELVPVLE-TVGR--LYQLRLMMEFSGE--------NRGYAFATYTTRHAVAAIKK-LNNFEIRPGHPFGVCISVDNCRLYIGGLPKDKKQEEVMLAMSCATMGVVDVKMSVCPT-----DKTRNRGYAFVEYESHRAAAMARRKLV-PG 188
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Sea Lamprey
Match: rbm4.2 (RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019])

HSP 1 Score: 55.8398 bits (133), Expect = 4.019e-9
Identity = 45/160 (28.12%), Postives = 73/160 (45.62%), Query Frame = 1 
Query:  493 NLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKL-SKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFK---DRSSAISALDVSN 960
             + +FV NVP    +    R+++E  +   +V            + ++ + F F+     SA  +A R + +  G RL    L V       EPS    S    +YV N+T +CT+  LR  F ++G +     V+D+AF+H +   D  +AI ALD S 
Sbjct:    1 TMKIFVGNVPFQATK----REIQELFEQHGEVT-----------ECEKIKDFAFVHM---SAPGDAERAIVALRGHRLHGAALDV-------EPSHGRGSSTTKMYVGNVTPDCTNVELRAKFEEFGPVAECDIVKDYAFVHMEREDDARAAIRALDGSE 135
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Sea Lamprey
Match: HNRNPA2B1 (heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033])

HSP 1 Score: 53.1434 bits (126), Expect = 4.484e-8
Identity = 41/149 (27.52%), Postives = 70/149 (46.98%), Query Frame = 1 
Query:  502 LFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKV--------RDFAFIHFKD 924
            LF+  + S +  EE LR+  E    +VD ++    +      SKR RGF F+ Y       +A +  ++P   +  R ++   A  + +    +   VK ++V  +     + +LRDYFS++G +ES+  V        R FAF+ F D
Sbjct:   16 LFIGGL-SFETTEESLREYYEQWGTIVDCVVMKDPS------SKRSRGFGFITYSVMEEVNSAMQ--ARP-HTVDGRVVEAKRAVPRDDSRPGIQVTVKKLFVGGIKDNTDESHLRDYFSKFGRVESVDMVTDKQTGKKRGFAFVTFDD 154
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967])

HSP 1 Score: 61.6178 bits (148), Expect = 2.210e-10
Identity = 65/255 (25.49%), Postives = 125/255 (49.02%), Query Frame = 1 
Query:  283 IESTLGENIIYELSVMLDTSHNYSSLKVMRNR------GFAFVTFQNKVLAAECRELLDNKEIRPGK--RIRMNQSTPNL------HLFVANV-PSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKV-DWAAKKQEPSQ--EVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIK-------KVRDFAFIHFKDRSSAISALDVSNKTVL 972
            +E ++ E  +Y++   + +    SS++V R+       G+A+V F +     +  E L+   I+ G+  RI  +Q  P+L      ++F+ N+ P I N+  L      F D      I ++K  + E  + + +GF F+ +E   AA  A   L+  G  L  +E+ V    ++K+  SQ  E  +   ++YV+N+ SE TD+  ++ F+++G I S         K++ F F++++    A+ A++  N + L
Sbjct:   45 LEPSVSEAHLYDIFSPIGS---VSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIK-GRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA-LYDTFSVFGD------ILSSKIATDE--NGKSKGFGFVHFEEEGAAKEAIDALN--GMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSEL 284

HSP 2 Score: 50.447 bits (119), Expect = 5.801e-7
Identity = 59/234 (25.21%), Postives = 94/234 (40.17%), Query Frame = 1 
Query:  370 RNRGFAFVTFQNKVLAAECRE-----LLDNKEIRPGKRIRMNQSTPNLH--------LFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQ-----------EVMSKVKSI--YVRNLTSECTDQNLRDYFSQYGEIESIK-------KVRDFAFIHFKDRSSAISALDVSNKTVL 972
            +++GF FV F+ +  A E  +     LL+ +EI     +   +    L         L+V N+ S    E+      +F  G + V     K   G++     +GF F+ YE H  A  A   L+     L   +L V  A KK E              E M+K + +  +V+NL     D+ L + F+ YG I S K       K + F F+ F     A  A+   N+ ++
Sbjct:  164 KSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF--GPI-VSASLEKDADGKL-----KGFGFVNYEKHEDAVKAVEALNDS--ELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIV 387
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Nematostella
Match: EDO46547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPQ1])

HSP 1 Score: 211.46 bits (537), Expect = 3.018e-62
Identity = 108/304 (35.53%), Postives = 173/304 (56.91%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            E  L   + +  +   +   +  YGPPP W+  IP    EVF+G +PRD+   EL+ + E+      IYE+ +M+D +         +NRG+AFV + +K  A  C + L+N EIR GK I +  S  N  LFV  +P    ++E++ ++ + TD +VDV+++ +       D  ++RGF F+EY +H  AA ARRKL     +LW  ++ VDWA  +QE  QE+M +VK +Y RNL    T++ +   FS++GE+E +KK++D+ FIHF+ +  A  A++  N+T    ++    I+V L KP
Sbjct:   19 EAALRALMERTKFPIRQCNGQRRYGPPPGWDRPIPPRGCEVFVGKIPRDLYEDELVPVFETA---GPIYEVRLMMDFNG--------QNRGYAFVVYTSKDDAKRCVKTLNNYEIRKGKCIGVCSSVDNCRLFVGGIPKKVKKDEIMAEVSKVTDNVVDVIVYPSA-----QDKTKNRGFAFVEYISHRDAAMARRKLMTGKIQLWGHQIAVDWAEPEQEVDQEIMDQVKVLYARNLLLSTTEETIEQAFSKFGEVERVKKIKDYCFIHFRTKEQARDAMEAMNET----ELDGNEIEVTLAKP 302
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Nematostella
Match: EDO38763 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC28])

HSP 1 Score: 207.223 bits (526), Expect = 7.305e-59
Identity = 119/332 (35.84%), Postives = 186/332 (56.02%), Query Frame = 1 
Query:  100 PDWELKLNEKLAKNHYGFYKSRSEIHYG-PPPNWNDQIPNHANE-----VFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLW-NRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP---NINSQYKSVGFSFSN 1065
            PD E K+   L +  Y    +  +  YG PPP W  + P   +E     VFIG +PRD    EL+ + E       IY+  +M+D     +       +GFAF TF NK  A    + LDNKEIRPGKR+ +  S  N  LFV ++P  K+++E+L +  + T+GL DV+++ +    G     ++RGF FLEYE+H AA+ ARR+L+    ++W N  + VDWA  ++EP  + M KVK +Y+RNL+   T++ L++ +SQYG ++ +KK++D+AF+HF +R  A+ A++ ++      ++    I+  L KP   N + Q    GF   N
Sbjct:  106 PD-EAKIKALLDRTGYTLDITTGQRKYGGPPPGWEGKPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEEC---GHIYDFRLMIDPISGLT-------KGFAFCTFSNKDEAQNAVKKLDNKEIRPGKRLGVCISVANSRLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQKG-----KNRGFAFLEYESHQAASLARRRLASGRIKVWGNIVVTVDWADPQEEPDDDAMKKVKVVYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDG----KEMDGLKIEASLAKPQPGNKDRQRGQSGFGSLN 417
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Nematostella
Match: EDO38734 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC26])

HSP 1 Score: 169.088 bits (427), Expect = 5.864e-47
Identity = 97/269 (36.06%), Postives = 151/269 (56.13%), Query Frame = 1 
Query:  220 ANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELK-VDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPN 1023
              EVFIG +PRD    EL+ L+E   GE  I E  + +D +          N+GFAF TF  +  A +    L++K+IRPG+R+ + +S  N  LFV  +P  K++EE+ ++  + T  L DV+++ +       D   +RGFVFLEY  + A A+A  + +    R+W + L+ V WA  ++ P   VMSKVKSIYVRN+    ++  L+  F++YG+IE ++K+RD+ F++F  R SA+ A+D  N       I    ++V L  P 
Sbjct:  109 GTEVFIGKIPRDCLEDELIPLLEKC-GE--IREFRLQMDPATGL-------NKGFAFCTFTKQTSAYQAITTLNDKDIRPGRRLAICKSRSNSRLFVKGIPKRKSKEEIFQEFSKVTTDLQDVIVYQSCDQGNHGD--LNRGFVFLEYANYIAGASALHRFTDGKVRIWGKVLEAVTWAEAREIPDYAVMSKVKSIYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAY----IDGCKLEVSLAIPQ 361
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Nematostella
Match: EDO33206 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSV8])

HSP 1 Score: 51.9878 bits (123), Expect = 6.376e-7
Identity = 55/232 (23.71%), Postives = 99/232 (42.67%), Query Frame = 1 
Query:  376 RGFAFVTFQNKVLAAECRE-----LLDNKEIRPGK------RIRMNQSTPN--LHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKS-------------IYVRNLTSECTDQNLRDYFSQYGEIESIKKVRD-------FAFIHFKDRSSAISALDVSNKTVL 972
            +G+ FV F+ +  A E        LL++K++  G+      RI    + P    +++V N     + E++ +++      +V + +     G       + +GF F+ +ET   A  A   L+  G  +  R L    A K+ E + EV ++++              +Y++NL     D+ LR+ FS YG I S K ++D       F F+ F     A  A+   N  +L
Sbjct:  141 KGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQM-KEICAEAGKIVSLKVMTDPEG-------KSKGFGFVSFETPEEAEEAVNVLN--GKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRIL 362
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Nematostella
Match: EDO32492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUY1])

HSP 1 Score: 49.6766 bits (117), Expect = 1.079e-6
Identity = 52/207 (25.12%), Postives = 88/207 (42.51%), Query Frame = 1 
Query:  382 FAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQST--PNL---------HLFVANVPSIKNREELLRDLREFTD-GLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVK----------------SIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRD--FAFI 912
            + FV F+    A E +  +D + +   K++++N +T  P +         H+FV ++    +   L +    F +   V V+   AK  S        +GF F+ +     AA A  ++      +  +++K +WAA+K  P+Q     VK                ++YV NL  +  D  L+  FSQYG I   K   D  +AFI
Sbjct:   39 YCFVEFETHADAQEAKFRMDQRTVM-DKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKS--------KGFGFVSFVRREDAAKAIAEMD--SVTIGGKQVKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFI 234
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Medaka
Match: rbm47 (RNA binding motif protein 47 [Source:NCBI gene;Acc:101167848])

HSP 1 Score: 221.861 bits (564), Expect = 2.073e-64
Identity = 117/312 (37.50%), Postives = 175/312 (56.09%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + +  Y   +   +  YGPPP WN   P    E+F+G +PRDV   EL+ + ES      IYE+ +M+D           +NRG+AFV +  K  A      L+N E+RPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E  ++ +R  FSQ+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   45 EAALVTLMERTGYTMVQENGQRKYGPPPGWNGPSPPRGCEIFVGKIPRDVYEDELVPVFESV---GRIYEMRLMMDFDG--------KNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMMETNEETIRQIFSQWNPGCVERVKKIRDYAFVHFTSRDDAVLAMDNLNGT----EIEGSCIEVTLAKPVDKEQY 336
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Medaka
Match: rbm47 (RNA binding motif protein 47 [Source:NCBI gene;Acc:101167848])

HSP 1 Score: 223.016 bits (567), Expect = 2.546e-64
Identity = 117/312 (37.50%), Postives = 175/312 (56.09%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + +  Y   +   +  YGPPP WN   P    E+F+G +PRDV   EL+ + ES      IYE+ +M+D           +NRG+AFV +  K  A      L+N E+RPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E  ++ +R  FSQ+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   30 EAALVTLMERTGYTMVQENGQRKYGPPPGWNGPSPPRGCEIFVGKIPRDVYEDELVPVFESV---GRIYEMRLMMDFDG--------KNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMMETNEETIRQIFSQWNPGCVERVKKIRDYAFVHFTSRDDAVLAMDNLNGT----EIEGSCIEVTLAKPVDKEQY 321
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Medaka
Match: rbm47 (RNA binding motif protein 47 [Source:NCBI gene;Acc:101167848])

HSP 1 Score: 223.016 bits (567), Expect = 3.929e-64
Identity = 117/312 (37.50%), Postives = 175/312 (56.09%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + +  Y   +   +  YGPPP WN   P    E+F+G +PRDV   EL+ + ES      IYE+ +M+D           +NRG+AFV +  K  A      L+N E+RPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E  ++ +R  FSQ+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   45 EAALVTLMERTGYTMVQENGQRKYGPPPGWNGPSPPRGCEIFVGKIPRDVYEDELVPVFESV---GRIYEMRLMMDFDG--------KNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMMETNEETIRQIFSQWNPGCVERVKKIRDYAFVHFTSRDDAVLAMDNLNGT----EIEGSCIEVTLAKPVDKEQY 336
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Medaka
Match: rbm47 (RNA binding motif protein 47 [Source:NCBI gene;Acc:101167848])

HSP 1 Score: 223.016 bits (567), Expect = 3.929e-64
Identity = 117/312 (37.50%), Postives = 175/312 (56.09%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + +  Y   +   +  YGPPP WN   P    E+F+G +PRDV   EL+ + ES      IYE+ +M+D           +NRG+AFV +  K  A      L+N E+RPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E  ++ +R  FSQ+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   45 EAALVTLMERTGYTMVQENGQRKYGPPPGWNGPSPPRGCEIFVGKIPRDVYEDELVPVFESV---GRIYEMRLMMDFDG--------KNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMMETNEETIRQIFSQWNPGCVERVKKIRDYAFVHFTSRDDAVLAMDNLNGT----EIEGSCIEVTLAKPVDKEQY 336
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Medaka
Match: rbm47 (RNA binding motif protein 47 [Source:NCBI gene;Acc:101167848])

HSP 1 Score: 223.016 bits (567), Expect = 3.929e-64
Identity = 117/312 (37.50%), Postives = 175/312 (56.09%), Query Frame = 1 
Query:  109 ELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQY--GEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQY 1038
            E  L   + +  Y   +   +  YGPPP WN   P    E+F+G +PRDV   EL+ + ES      IYE+ +M+D           +NRG+AFV +  K  A      L+N E+RPG+ + +  S  N  LF+  +P  K REE+L ++ + T+G++DV+++A+       D  ++RGF F+EYE+H AAA ARRKL     +LW  ++ VDWA  + +  ++VM  VK +YVRNL  E  ++ +R  FSQ+  G +E +KK+RD+AF+HF  R  A+ A+D  N T    +I    I+V L KP    QY
Sbjct:   45 EAALVTLMERTGYTMVQENGQRKYGPPPGWNGPSPPRGCEIFVGKIPRDVYEDELVPVFESV---GRIYEMRLMMDFDG--------KNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAA-----DKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMMETNEETIRQIFSQWNPGCVERVKKIRDYAFVHFTSRDDAVLAMDNLNGT----EIEGSCIEVTLAKPVDKEQY 336
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Planmine SMEST
Match: SMESG000071117.1 (SMESG000071117.1)

HSP 1 Score: 1002.66 bits (2591), Expect = 0.000e+0
Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 1 
Query:   49 MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTXXXXXXXXXXXXXXXXXXXXXXXXXMYGMTSPAHVPSSNKNKPSTAWHIMNGXXXXXXXXXXXXXXXXXQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSGKMFYKSLFDFNKAHVKSIYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG 1638
            MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPYGLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNLSNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSGKMFYKSLFDFNKAHVKSIYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG
Sbjct:    1 MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPYGLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNLSNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSGKMFYKSLFDFNKAHVKSIYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG 530
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Planmine SMEST
Match: SMESG000071117.1 (SMESG000071117.1)

HSP 1 Score: 959.518 bits (2479), Expect = 0.000e+0
Identity = 513/530 (96.79%), Postives = 513/530 (96.79%), Query Frame = 1 
Query:   49 MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTXXXXXXXXXXXXXXXXXXXXXXXXXMYGMTSPAHVPSSNKNKPSTAWHIMNGXXXXXXXXXXXXXXXXXQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSGKMFYKSLFDFNKAHVKSIYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG 1638
            MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPYGLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNLSNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSG                 IYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG
Sbjct:    1 MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPYGLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNLSNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSG-----------------IYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG 513
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Planmine SMEST
Match: SMESG000071117.1 (SMESG000071117.1)

HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0
Identity = 513/530 (96.79%), Postives = 513/530 (96.79%), Query Frame = 1 
Query:   49 MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTXXXXXXXXXXXXXXXXXXXXXXXXXMYGMTSPAHVPSSNKNKPSTAWHIMNGXXXXXXXXXXXXXXXXXQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSGKMFYKSLFDFNKAHVKSIYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG 1638
            MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPYGLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNLSNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSG                 IYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG
Sbjct:    1 MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPYGLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNLSNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGASGDNSGISQIKNSENKPPNLYSG-----------------IYDVNKRIKAIKQANCSNPQALFYWGVSPNEIMYRDSPFMG 513
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Planmine SMEST
Match: SMESG000032489.1 (SMESG000032489.1)

HSP 1 Score: 183.341 bits (464), Expect = 1.755e-49
Identity = 105/286 (36.71%), Postives = 159/286 (55.59%), Query Frame = 1 
Query:  178 YGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYF-----SQYGEIESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            +GPP +W    P+   EVFIG +PRD    EL+ + E T+G  +IYE  +M+D +          NRG+ F  +Q K  +    E L+N EIRPGK I +  S  N  LFV  +P  K +EE+  +++  T G+V+V+ + +       +  ++RGF F+EYE+H +AA ARRKL      LW +++ VDWA  ++E  + +MS VK +Y RNL    T+  LR+ F       Y  IE +KK++D+AFIHF +R  A +A +  N +    +I    ++V   KP
Sbjct:   57 FGPPSDWIGDPPSRGCEVFIGKIPRDCLEDELIPIFE-TIG--LIYEFRLMVDFNG--------VNRGYGFCVYQKKEDSNRAVEKLNNYEIRPGKTIGVCFSVDNCRLFVGGIPKNKTKEEIFMEMQRVTSGVVNVIAYPSIA-----NKNKNRGFAFVEYESHKSAAVARRKLIPGRIPLWGQQIAVDWAEPEREVHETIMSTVKILYARNLMLTTTEDTLREKFLTASGGPYSCIERVKKMKDYAFIHFTERQYAENAKESLNNS----EIDGSIVEVTWAKP 322
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Planmine SMEST
Match: SMESG000044930.1 (SMESG000044930.1)

HSP 1 Score: 183.726 bits (465), Expect = 2.023e-49
Identity = 106/302 (35.10%), Postives = 162/302 (53.64%), Query Frame = 1 
Query:  130 LAKNHYGFYKSRSEIHYGPPPNWNDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHNYSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNLHLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGFVFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVKSIYVRNLTSECTDQNLRDYFSQYGE-----IESIKKVRDFAFIHFKDRSSAISALDVSNKTVLPNDISNGTIDVELVKP 1020
            L +  Y   +   +  YGPPP+W    P    EVFIG +PRD    EL+ + E  +G   IY   +M+D +          NRG+ F  + N+         L+N EIR  K + +  S  N  LFV  +P  K +EE+  ++   T+G+ DV+ + +       D  ++RGF F+EYE+H AAA ARRKL     +LW +++ VDWA  ++E ++++MS VK +YVRNL    T++ +R+ F          +E +KK++D+AF+HFKDR+ A +AL   N T     I +  I+V   KP
Sbjct:   46 LNRTMYPIVQENGQRRYGPPPDWKGFPPRRGCEVFIGKIPRDCFEDELVPVFER-IGP--IYMFRLMMDFTGT--------NRGYGFCIYMNREDTKRAVAELNNFEIRRDKPLGVCLSVDNCRLFVGGIPKNKTKEEIFIEMVRVTEGVKDVIAYPSVA-----DKTKNRGFAFVEYESHKAAAMARRKLIPGRIQLWGQQIAVDWAEPEREVNEDIMSTVKILYVRNLMLTTTEETIREKFVACSNGPPDCVERVKKIKDYAFVHFKDRNLADNALKALNNT----QIDSSWIEVNWAKP 327
The following BLAST results are available for this feature:
BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
A1CF4.246e-6038.44APOBEC1 complementation factor [Source:HGNC Symbol... [more]
A1CF4.246e-6038.44APOBEC1 complementation factor [Source:HGNC Symbol... [more]
A1CF4.246e-6038.44APOBEC1 complementation factor [Source:HGNC Symbol... [more]
A1CF5.699e-6038.44APOBEC1 complementation factor [Source:HGNC Symbol... [more]
A1CF1.981e-5940.43APOBEC1 complementation factor [Source:HGNC Symbol... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hrp-26.159e-4932.61HnRNP A1 homolog [Source:UniProtKB/TrEMBL;Acc:B3K... [more]
hrp-26.159e-4932.61HnRNP A1 homolog [Source:UniProtKB/TrEMBL;Acc:B3K... [more]
tiar-14.813e-1022.00TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
tiar-11.233e-823.04TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
tiar-13.803e-822.63TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Syp2.539e-7139.68gene:FBgn0038826 transcript:FBtr0083961[more]
Syp2.575e-7139.68gene:FBgn0038826 transcript:FBtr0113256[more]
Syp3.039e-7139.68gene:FBgn0038826 transcript:FBtr0083963[more]
Syp4.179e-7139.68gene:FBgn0038826 transcript:FBtr0334720[more]
Syp5.586e-7139.68gene:FBgn0038826 transcript:FBtr0083958[more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm471.466e-6437.82RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-... [more]
a1cf7.946e-6038.11apobec1 complementation factor [Source:ZFIN;Acc:ZD... [more]
a1cf7.946e-6038.11apobec1 complementation factor [Source:ZFIN;Acc:ZD... [more]
hnrnpr9.244e-5636.45heterogeneous nuclear ribonucleoprotein R [Source:... [more]
hnrnpr9.963e-5636.45heterogeneous nuclear ribonucleoprotein R [Source:... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tom19.529e-6137.85target of myb1 membrane trafficking protein [Sourc... [more]
tom11.543e-6037.85target of myb1 membrane trafficking protein [Sourc... [more]
tom12.697e-6036.10target of myb1 membrane trafficking protein [Sourc... [more]
HNRNPR3.487e-6038.71heterogeneous nuclear ribonucleoprotein R [Source:... [more]
tom14.154e-6037.85target of myb1 membrane trafficking protein [Sourc... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Hnrnpr5.943e-5938.62heterogeneous nuclear ribonucleoprotein R [Source:... [more]
Hnrnpr5.943e-5938.62heterogeneous nuclear ribonucleoprotein R [Source:... [more]
Hnrnpr5.805e-5838.62heterogeneous nuclear ribonucleoprotein R [Source:... [more]
Hnrnpr5.805e-5838.62heterogeneous nuclear ribonucleoprotein R [Source:... [more]
Syncrip9.176e-5837.10synaptotagmin binding, cytoplasmic RNA interacting... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9NQ94|A1CF_HUMAN2.737e-5938.44APOBEC1 complementation factor OS=Homo sapiens OX=... [more]
sp|Q5R9H4|A1CF_PONAB5.579e-5938.11APOBEC1 complementation factor OS=Pongo abelii OX=... [more]
sp|O43390|HNRPR_HUMAN4.088e-5738.62Heterogeneous nuclear ribonucleoprotein R OS=Homo ... [more]
sp|Q7TP47|HNRPQ_RAT2.068e-5636.96Heterogeneous nuclear ribonucleoprotein Q OS=Rattu... [more]
sp|O60506|HNRPQ_HUMAN1.009e-5537.10Heterogeneous nuclear ribonucleoprotein Q OS=Homo ... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2S2PGY76.185e-7040.13Heterogeneous nuclear ribonucleoprotein Q OS=Schiz... [more]
A0A2H8TMH21.193e-6940.45Heterogeneous nuclear ribonucleoprotein Q OS=Melan... [more]
J9K1U62.720e-6940.13Uncharacterized protein OS=Acyrthosiphon pisum OX=... [more]
A0A2S2PZ734.713e-6940.13Heterogeneous nuclear ribonucleoprotein Q OS=Sipha... [more]
A0A0A1XRT51.178e-6839.05Heterogeneous nuclear ribonucleoprotein Q (Fragmen... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm474.293e-6236.86RNA binding motif protein 47 [Source:NCBI gene;Acc... [more]
hnrnpr9.290e-5837.10heterogeneous nuclear ribonucleoprotein R [Source:... [more]
rbm462.103e-5738.65RNA binding motif protein 46 [Source:NCBI gene;Acc... [more]
syncripl4.064e-5737.38heterogeneous nuclear ribonucleoprotein Q [Source:... [more]
syncripl1.047e-5637.38heterogeneous nuclear ribonucleoprotein Q [Source:... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
syncripl2.462e-5837.21synaptotagmin binding, cytoplasmic RNA interacting... [more]
ENSPMAT00000009756.16.555e-3035.91pep scaffold:Pmarinus_7.0:GL478948:7772:26420:1 ge... [more]
ENSPMAT00000003808.17.681e-2338.04pep scaffold:Pmarinus_7.0:GL483076:13225:15644:1 g... [more]
rbm4.24.019e-928.13RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB... [more]
HNRNPA2B14.484e-827.52heterogeneous nuclear ribonucleoprotein A2/B1 [Sou... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
PAB12.210e-1025.49Poly(A) binding protein; part of the 3'-end RNA-pr... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO465473.018e-6235.53Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO387637.305e-5935.84Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO387345.864e-4736.06Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO332066.376e-723.71Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO324921.079e-625.12Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm472.073e-6437.50RNA binding motif protein 47 [Source:NCBI gene;Acc... [more]
rbm472.546e-6437.50RNA binding motif protein 47 [Source:NCBI gene;Acc... [more]
rbm473.929e-6437.50RNA binding motif protein 47 [Source:NCBI gene;Acc... [more]
rbm473.929e-6437.50RNA binding motif protein 47 [Source:NCBI gene;Acc... [more]
rbm473.929e-6437.50RNA binding motif protein 47 [Source:NCBI gene;Acc... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein Q vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000071117.10.000e+0100.00SMESG000071117.1[more]
SMESG000071117.10.000e+096.79SMESG000071117.1[more]
SMESG000071117.10.000e+096.79SMESG000071117.1[more]
SMESG000032489.11.755e-4936.71SMESG000032489.1[more]
SMESG000044930.12.023e-4935.10SMESG000044930.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30013109 ID=SMED30013109|Name=Heterogeneous nuclear ribonucleoprotein Q|organism=Schmidtea mediterranea sexual|type=transcript|length=1883bp
TACACATATTGATGTTCAAATAGTGATAACTAATTAAAGTCACTGTTGAT
GGATACTTTTGAAAATAGCATAGATGAACATCAAGTGGTCAATGATATAC
CAGATTGGGAACTAAAATTAAATGAAAAACTTGCAAAAAATCATTACGGA
TTTTACAAAAGTCGAAGTGAAATTCATTATGGCCCTCCACCAAATTGGAA
TGATCAAATACCTAATCATGCAAATGAAGTTTTTATTGGTGCTCTACCCC
GTGATGTAAATATATATGAATTATTATGCTTAATTGAAAGCACTCTTGGA
GAAAATATTATTTATGAATTATCTGTAATGCTAGACACTTCACATAATTA
TTCATCTCTAAAAGTTATGCGAAATCGTGGATTTGCATTTGTTACTTTTC
AAAATAAAGTTCTAGCGGCAGAATGTAGAGAGTTGTTAGATAATAAAGAA
ATCAGACCGGGTAAACGAATACGCATGAATCAATCTACTCCAAATCTTCA
TTTATTTGTTGCCAATGTACCAAGCATAAAAAATAGAGAAGAATTGCTTC
GTGATCTCAGAGAATTTACAGATGGACTAGTAGATGTAATGATTTTTGCC
GCCAAAACGGGAAGTGGTGAAATGGATTCTAAACGTCATCGTGGCTTTGT
ATTTCTGGAATATGAAACACATTCAGCAGCAGCAAATGCGAGAAGAAAAC
TTTCTAAGCCTGGTTTTAGATTGTGGAATAGAGAATTAAAAGTTGACTGG
GCTGCTAAAAAGCAAGAACCATCTCAAGAAGTCATGTCCAAAGTTAAATC
TATTTACGTCAGAAATCTCACTTCTGAATGCACTGATCAGAATCTCAGAG
ACTATTTTTCCCAATATGGAGAAATAGAATCAATTAAAAAAGTCAGAGAC
TTCGCATTTATTCATTTTAAAGACAGATCTTCAGCCATTAGTGCTTTAGA
TGTTAGTAATAAAACTGTTTTACCTAATGATATTAGTAATGGAACAATTG
ATGTGGAGCTAGTCAAACCAAACATAAATTCTCAATATAAGTCTGTTGGA
TTTTCTTTCTCAAATCTTCTAACTCCGCCATTTCTTTCGTATCCATATGG
ATTACCATTACCTCCTCCTCCAGCGCATTTACTACCTCCACCTCACCTCA
TGTATGGAATGACTAGTCCTGCTCATGTACCATCATCAAATAAAAATAAA
CCATCAACAGCATGGCATATCATGAATGGAATTAAAAATTCAAATCTTTC
TAATAATTTACGTTCAAATAAAATTAATCTTCAAAATAATCGTCCTACTT
CTGCTTTCGATACCGGTGTTTCAAAGTGGACAAATAATATTGATAATCAG
AACTTTTCTAATCCATCTACACGTCAAAATGTATCTGTTGGTGCTAGTGG
AGATAATTCTGGAATTTCTCAAATCAAAAATTCAGAAAATAAACCACCTA
ATTTGTATTCTGGAAAAATGTTTTATAAGTCTCTTTTTGATTTCAACAAA
GCTCATGTTAAATCAATTTATGATGTAAATAAGAGAATTAAAGCAATCAA
ACAAGCAAATTGCTCTAATCCACAAGCTTTATTTTATTGGGGAGTCTCTC
CAAATGAGATAATGTATCGGGATTCTCCATTTATGGGCTGGTAATTATTC
AGAATGAAAAAGAAAATATTTATTTAAATTGTTTATGCTCGAAGTGTGAT
ATTATCAATGTCAGTTTACGTAAATTGTGATGCGAGATTGCAGTTTTGTT
TTTATCTCTGTTTGTTTAACTTCCTTACAAATAATTAATTGTTAAATCAA
ATATCTAATAATAAGAATCGCTTTATATAACCATTGATTATCTGTGAATT
TAGTTGATAGTTTGTTATTTATTATTTGATCTG
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protein sequence of SMED30013109-orf-1

>SMED30013109-orf-1 ID=SMED30013109-orf-1|Name=SMED30013109-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=532bp
MDTFENSIDEHQVVNDIPDWELKLNEKLAKNHYGFYKSRSEIHYGPPPNW
NDQIPNHANEVFIGALPRDVNIYELLCLIESTLGENIIYELSVMLDTSHN
YSSLKVMRNRGFAFVTFQNKVLAAECRELLDNKEIRPGKRIRMNQSTPNL
HLFVANVPSIKNREELLRDLREFTDGLVDVMIFAAKTGSGEMDSKRHRGF
VFLEYETHSAAANARRKLSKPGFRLWNRELKVDWAAKKQEPSQEVMSKVK
SIYVRNLTSECTDQNLRDYFSQYGEIESIKKVRDFAFIHFKDRSSAISAL
DVSNKTVLPNDISNGTIDVELVKPNINSQYKSVGFSFSNLLTPPFLSYPY
GLPLPPPPAHLLPPPHLMYGMTSPAHVPSSNKNKPSTAWHIMNGIKNSNL
SNNLRSNKINLQNNRPTSAFDTGVSKWTNNIDNQNFSNPSTRQNVSVGAS
GDNSGISQIKNSENKPPNLYSGKMFYKSLFDFNKAHVKSIYDVNKRIKAI
KQANCSNPQALFYWGVSPNEIMYRDSPFMGW*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000140anterior region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: cellular component
TermDefinition
GO:0019013viral nucleocapsid
GO:0030529intracellular ribonucleoprotein complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 251..320
e-value: 1.4E-14
score: 64.4
coord: 151..233
e-value: 4.0E-4
score: 29.7
coord: 60..144
e-value: 8.8E-4
score: 28.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 252..309
e-value: 6.9E-15
score: 54.6
coord: 103..136
e-value: 1.9E-4
score: 21.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 250..324
score: 15.46
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 150..237
score: 11.213
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 59..148
score: 11.622
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 150..236
e-value: 7.4E-15
score: 56.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 242..333
e-value: 4.4E-18
score: 67.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 48..149
e-value: 2.4E-8
score: 35.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..463
NoneNo IPR availablePANTHERPTHR21245FAMILY NOT NAMEDcoord: 24..369
NoneNo IPR availablePANTHERPTHR21245:SF15coord: 24..369
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 241..327
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 59..240