ATP-binding cassette sub-family A member
|
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012877 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 24
Homology
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Human
Match: ABCA12 (ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]) HSP 1 Score: 114.775 bits (286), Expect = 3.283e-28 Identity = 77/223 (34.53%), Postives = 124/223 (55.61%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL-KFIQNHVPDAKMMEETRSQWTIVLPQSENNCS-KFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKL-DALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
LSDRIA + QG L+CCGS +LK+ FG+GY+L + K +S N ++ +A+ IQ+H+P+A + E+ + VLP S + L LD M DL I YG+SDT++EEVFL + + S + + + LT +K+ ++ +G + P S+ S S F ++ ++ + E L G L +++I+ + IKRFH+TRRN K I++
Sbjct: 1543 LSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNL----NANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKE-SQKNSAMSLEHLTQKKIGNSNANGISTPDDLSVSS----SNFTDRDD--KILTRGE----RLDGFGLLLKKIMAILIKRFHHTRRNWKGLIAQ 1750 HSP 2 Score: 56.6102 bits (135), Expect = 2.101e-8 Identity = 37/128 (28.91%), Postives = 59/128 (46.09%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYL-IIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD 384
L R+AI+ GK QC GS +K FG G+ + + +K + E KF+Q H P + ++ S +P + + ++FD L+ L I + +S T+LEEVF+ A D
Sbjct: 2455 LCTRLAIMVNGKFQCIGSLQHIKSRFGRGFTVKVHLKNNKVTMETLT-----------KFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVA---NIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2568
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Human
Match: ABCA12 (ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]) HSP 1 Score: 114.39 bits (285), Expect = 3.968e-28 Identity = 77/223 (34.53%), Postives = 124/223 (55.61%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL-KFIQNHVPDAKMMEETRSQWTIVLPQSENNCS-KFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKL-DALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
LSDRIA + QG L+CCGS +LK+ FG+GY+L + K +S N ++ +A+ IQ+H+P+A + E+ + VLP S + L LD M DL I YG+SDT++EEVFL + + S + + + LT +K+ ++ +G + P S+ S S F ++ ++ + E L G L +++I+ + IKRFH+TRRN K I++
Sbjct: 1225 LSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNL----NANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKE-SQKNSAMSLEHLTQKKIGNSNANGISTPDDLSVSS----SNFTDRDD--KILTRGE----RLDGFGLLLKKIMAILIKRFHHTRRNWKGLIAQ 1432 HSP 2 Score: 56.6102 bits (135), Expect = 2.063e-8 Identity = 37/128 (28.91%), Postives = 59/128 (46.09%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYL-IIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD 384
L R+AI+ GK QC GS +K FG G+ + + +K + E KF+Q H P + ++ S +P + + ++FD L+ L I + +S T+LEEVF+ A D
Sbjct: 2137 LCTRLAIMVNGKFQCIGSLQHIKSRFGRGFTVKVHLKNNKVTMETLT-----------KFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVA---NIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2250
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Human
Match: ABCA4 (ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]) HSP 1 Score: 111.694 bits (278), Expect = 4.351e-27 Identity = 85/287 (29.62%), Postives = 141/287 (49.13%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIV-KTESIQWE------------------------DFQNELSISGGI--ALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDP-SGEV--GGIKEKK--LTPEK--LDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAII+QG+L C G+ +FLK FG G YL +V K ++IQ + D E + G + + + +HVP+AK++E + +LP + LF +L+ + DLG+ ++G+SDT LEE+FLKV +D SG + GG ++K+ + P L G P+ +++ S A E + + TG L +Q + L +KRF +T R+ K F++++VLP + + + L + P + P + + PW+
Sbjct: 1126 LGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVRKMKNIQSQRKGSEGTCSCSSKGFSTTCPAHVDDLTPEQVLDGDVNELMDVVLHHVPEAKLVECIGQELIFLLPNKNFKHRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSDSGPLFAGGAQQKRENVNPRHPCLGPREKAGQTPQDSNVCS---PGAPAAHPEGQPPPEPECPGPQLNTGTQLVLQHVQALLVKRFQHTIRSHKDFLAQIVLPATFVFLALMLSIVIPPFGEYPALTLHPWI 1409
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Human
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]) HSP 1 Score: 107.071 bits (266), Expect = 1.479e-25 Identity = 89/289 (30.80%), Postives = 137/289 (47.40%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTE----------------SIQWEDFQNELSISGGIAL---------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEK-LDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK + ++ ED ++ S G+ I+ HV +A+++E+ + T VLP F +LF ++D + DLGI +YG+S+T+LEE+FLKVA++ SG + L + A D + RP + D ++ E R S + +Y + G L QQ + L KR RR+ K F +++VLP + + + + I P P + + PW+
Sbjct: 1097 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE-SGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAADPNDSDIDPESRETDLLSGMDGKGSYQ-VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWM 1383 HSP 2 Score: 50.0618 bits (118), Expect = 2.878e-6 Identity = 39/134 (29.10%), Postives = 63/134 (47.01%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIA-LKFIQNH----VPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPS 390
L R+AI+ G+ +C GS LK FG+GY +++ I+G LK +Q+ P + + E+ R+ LP S S +F L ++ + L I Y +S T+L++VF+ A D S
Sbjct: 2110 LCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV---------------RIAGSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSS---LSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQS 2225
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Human
Match: ABCA7 (ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]) HSP 1 Score: 102.834 bits (255), Expect = 2.758e-24 Identity = 78/274 (28.47%), Postives = 128/274 (46.72%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGI-------------------ALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKV----ADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISP 756
L DR+A+++ G+L CCGS +FL++ G+GYYL +VK + + + + G + L +Q+ VP A+++EE + +VLP + + F LF +LD + +L + YG+SDTSLEE+FLKV A D E G + T + L P +L + E + S + + G +L QQ+ L +KRF RR+ + +++VLP L + + + I P P + +SP
Sbjct: 161 LGDRVAVVAGGRLCCCGSPLFLRRHLGSGYYLTLVKARLPLTTNEKADTDMEGSVDTRQEKKNGSQGSRVGTPQLLALVQHWVPGARLVEELPHELVLVLPYTGAHDGSFATLFRELDTRLAELRLTGYGISDTSLEEIFLKVVEECAADTDMEDGSCGQHLCT--GIAGLDVTLRLKMPPQETALENGEPAGSAPETDQGSGPDAV--GRVQGWALTRQQLQALLLKRFLLARRSRRGLFAQIVLPALFVGLALVFSLIVPPFGHYPALRLSP 430
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Celegans
Match: abt-4 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q9TXV8]) HSP 1 Score: 82.0333 bits (201), Expect = 1.938e-17 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L DRIAI++ G+L+CCGS +FLK+++G+GY+L IV ++ D I I+ ++P+A + + T +L S + FP LF +L+ GI ++G+S T++EEVFLKV
Sbjct: 793 LGDRIAIMAHGQLECCGSPMFLKQQYGDGYHLTIVY-DTTSTPDVSKTTDI--------IREYIPEAHVFSYIGQEATYLL--SATHRPIFPKLFKELEDHQTQCGITSFGVSITTMEEVFLKVG 906
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Celegans
Match: ced-7 (ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]) HSP 1 Score: 55.4546 bits (132), Expect = 1.703e-8 Identity = 50/238 (21.01%), Postives = 98/238 (41.18%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENN------------------CSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
L D + I+S GKL G++ +LK++FG GY L +V D + I ++V +A+ E Q I+LP++ + F ++ + L + L + ++GLS +LE+VF+ + D + + +++ +A P+ + D K + + S+ +G++ + Q I + K+F Y+RRN ++
Sbjct: 797 LGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVL-------DHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPEARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSRNA-------SEPSLKPAGYDTQSSTKSADSYQKLMDSQARGPEKSGVAKMVAQFISIMRKKFLYSRRNWAQLFTQ 1020 HSP 2 Score: 48.1358 bits (113), Expect = 4.054e-6 Identity = 35/129 (27.13%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVL----PQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L RIA++++G L GSS LK +GN Y + + E Q + + ++ +Q +P++ +++ T + T+ L P+ + +C + F+ + +DLG+ + L+ +SLEE FL++A
Sbjct: 1623 LCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD-----------MVVQLVQTRLPNS-VLKTTSTNKTLNLKWQIPKEKEDC--WSAKFEMVQALAKDLGVKDFILAQSSLEETFLRLA 1737
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Celegans
Match: ced-7 (ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]) HSP 1 Score: 55.0694 bits (131), Expect = 2.057e-8 Identity = 50/238 (21.01%), Postives = 98/238 (41.18%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENN------------------CSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
L D + I+S GKL G++ +LK++FG GY L +V D + I ++V +A+ E Q I+LP++ + F ++ + L + L + ++GLS +LE+VF+ + D + + +++ +A P+ + D K + + S+ +G++ + Q I + K+F Y+RRN ++
Sbjct: 743 LGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVL-------DHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPEARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSRNA-------SEPSLKPAGYDTQSSTKSADSYQKLMDSQARGPEKSGVAKMVAQFISIMRKKFLYSRRNWAQLFTQ 966 HSP 2 Score: 48.1358 bits (113), Expect = 4.465e-6 Identity = 35/129 (27.13%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVL----PQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L RIA++++G L GSS LK +GN Y + + E Q + + ++ +Q +P++ +++ T + T+ L P+ + +C + F+ + +DLG+ + L+ +SLEE FL++A
Sbjct: 1569 LCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD-----------MVVQLVQTRLPNS-VLKTTSTNKTLNLKWQIPKEKEDC--WSAKFEMVQALAKDLGVKDFILAQSSLEETFLRLA 1683
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Celegans
Match: ced-7 (ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]) HSP 1 Score: 55.0694 bits (131), Expect = 2.293e-8 Identity = 50/238 (21.01%), Postives = 98/238 (41.18%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENN------------------CSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
L D + I+S GKL G++ +LK++FG GY L +V D + I ++V +A+ E Q I+LP++ + F ++ + L + L + ++GLS +LE+VF+ + D + + +++ +A P+ + D K + + S+ +G++ + Q I + K+F Y+RRN ++
Sbjct: 730 LGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVL-------DHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPEARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSRNA-------SEPSLKPAGYDTQSSTKSADSYQKLMDSQARGPEKSGVAKMVAQFISIMRKKFLYSRRNWAQLFTQ 953 HSP 2 Score: 47.7506 bits (112), Expect = 4.971e-6 Identity = 35/129 (27.13%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVL----PQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L RIA++++G L GSS LK +GN Y + + E Q + + ++ +Q +P++ +++ T + T+ L P+ + +C + F+ + +DLG+ + L+ +SLEE FL++A
Sbjct: 1556 LCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD-----------MVVQLVQTRLPNS-VLKTTSTNKTLNLKWQIPKEKEDC--WSAKFEMVQALAKDLGVKDFILAQSSLEETFLRLA 1670
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Celegans
Match: ced-7 (ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]) HSP 1 Score: 55.0694 bits (131), Expect = 2.314e-8 Identity = 50/238 (21.01%), Postives = 98/238 (41.18%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENN------------------CSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
L D + I+S GKL G++ +LK++FG GY L +V D + I ++V +A+ E Q I+LP++ + F ++ + L + L + ++GLS +LE+VF+ + D + + +++ +A P+ + D K + + S+ +G++ + Q I + K+F Y+RRN ++
Sbjct: 730 LGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVL-------DHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPEARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSRNA-------SEPSLKPAGYDTQSSTKSADSYQKLMDSQARGPEKSGVAKMVAQFISIMRKKFLYSRRNWAQLFTQ 953 HSP 2 Score: 47.7506 bits (112), Expect = 4.882e-6 Identity = 35/129 (27.13%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVL----PQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L RIA++++G L GSS LK +GN Y + + E Q + + ++ +Q +P++ +++ T + T+ L P+ + +C + F+ + +DLG+ + L+ +SLEE FL++A
Sbjct: 1554 LCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD-----------MVVQLVQTRLPNS-VLKTTSTNKTLNLKWQIPKEKEDC--WSAKFEMVQALAKDLGVKDFILAQSSLEETFLRLA 1668
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Fly
Match: CG6052 (gene:FBgn0036747 transcript:FBtr0075195) HSP 1 Score: 80.8777 bits (198), Expect = 5.643e-17 Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGG 405
L DRIAI+S+GKLQC G+S +LKK FG GY L+ + Q+ + G + I+ +VP K ++ T LP + KF +L DLD L +V YGLS +LE+VF+ V D + G
Sbjct: 711 LGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCI---------MQSGCDV--GAVTQLIRKYVPPIKPERVLGTELTYRLPTEYSK--KFAELLQDLDEKCAQLQLVGYGLSGATLEDVFMAVNTDKRVQGGA 831
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0306679) HSP 1 Score: 76.2554 bits (186), Expect = 2.038e-15 Identity = 47/139 (33.81%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKK 420
L DRIAI+ G+L+C G+S FLKK++G+GY LI VK + + NE++ + ++P K + ++ + LP S + +KF ++F L+ ++L + YG+ TS+EEVF+KV + G IK++
Sbjct: 733 LGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCE----TNEVT-------ALLNKYIPGLKPECDIGAELSYQLPDSAS--AKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKD-NTGNIKDQH 857 HSP 2 Score: 47.3654 bits (111), Expect = 8.579e-6 Identity = 36/145 (24.83%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL--------------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L R+AI+ G+ +C GS+ LK +F G +I+K + + + + +SGG A +F++ P++ + EE + T +P + K+ +F ++ + L + Y +S T+LEE+FL+ A
Sbjct: 1565 LCTRLAIMVNGEFKCIGSTQHLKNKFSKG---LILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTG---VKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1703
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332488) HSP 1 Score: 76.2554 bits (186), Expect = 2.076e-15 Identity = 50/139 (35.97%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKK 420
L DRIAI+ G+L+C G+S FLKK++G+GY LI VK + + NE++ + K+I P+ + E Q LP S + +KF ++F L+ ++L + YG+ TS+EEVF+KV + G IK++
Sbjct: 711 LGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCE----TNEVT---ALLNKYIPGLKPECDIGAELSYQ----LPDSAS--AKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKD-NTGNIKDQH 835 HSP 2 Score: 47.3654 bits (111), Expect = 8.500e-6 Identity = 36/145 (24.83%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL--------------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L R+AI+ G+ +C GS+ LK +F G +I+K + + + + +SGG A +F++ P++ + EE + T +P + K+ +F ++ + L + Y +S T+LEE+FL+ A
Sbjct: 1543 LCTRLAIMVNGEFKCIGSTQHLKNKFSKG---LILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTG---VKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1681
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332489) HSP 1 Score: 76.2554 bits (186), Expect = 2.113e-15 Identity = 47/139 (33.81%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKK 420
L DRIAI+ G+L+C G+S FLKK++G+GY LI VK + + NE++ + ++P K + ++ + LP S + +KF ++F L+ ++L + YG+ TS+EEVF+KV + G IK++
Sbjct: 711 LGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCE----TNEVT-------ALLNKYIPGLKPECDIGAELSYQLPDSAS--AKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKD-NTGNIKDQH 835 HSP 2 Score: 47.3654 bits (111), Expect = 8.647e-6 Identity = 36/145 (24.83%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL--------------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L R+AI+ G+ +C GS+ LK +F G +I+K + + + + +SGG A +F++ P++ + EE + T +P + K+ +F ++ + L + Y +S T+LEE+FL+ A
Sbjct: 1543 LCTRLAIMVNGEFKCIGSTQHLKNKFSKG---LILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTG---VKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1681
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Fly
Match: CG1494 (gene:FBgn0031169 transcript:FBtr0332306) HSP 1 Score: 76.2554 bits (186), Expect = 2.299e-15 Identity = 42/139 (30.22%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKK 420
++DR+AI+S G+L+C G+ FLK +G+GY L VK ++ + ++EL + +++P+ + + + T VL + +FP L DDL+ M+ LG+V++ + DTS+EE+FL+ + + + G + +
Sbjct: 739 IADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYK----RDEL-------FGMMNSYMPNMSIERDIGYKVTFVLENKFED--QFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRFGCEDNDQSGAFQSHE 864
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Zebrafish
Match: abca1b (ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]) HSP 1 Score: 121.709 bits (304), Expect = 8.573e-31 Identity = 93/292 (31.85%), Postives = 136/292 (46.58%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGG-----------------IALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIE------EIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK + ++ +D +E S G I + I HVP A+M+E+ + T VLP F +LF DLD + DLGI +YG+SDT+LEE+FLKVA+D + + + L + G + L+ D + + E E +S + G SL QQ + L KR Y RR+ K F +++VLP + + + + I P P + ++PW+
Sbjct: 1099 LGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPSLSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIVDVTIISRLILKHVPAARMVEDQGHEITYVLPYESAKNGAFVELFHDLDDRLADLGISSYGVSDTTLEEIFLKVAEDSGVDTEMLSDGTLPVRRQRRHAFGADHQSCLKPLTEDDSFDCNESEGDPESKETDYLSGSDGKGSYQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALNPWM 1390 HSP 2 Score: 54.6842 bits (130), Expect = 5.258e-8 Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L R+AI+ G+ +C GS LK FG+G Y II++ D Q +KFI++ +P + + E+ R+ LP S + +F L + E L I Y +S T+L++VF+ A
Sbjct: 2119 LCTRMAIMVNGRFRCLGSVQHLKNRFGDG-YTIILRVAGPD-PDLQP--------VMKFIESELPGSTLKEKHRNMLQYQLPSS---LTSLAHIFSILAKNKEFLRIEDYSVSQTTLDQVFVNFA 2230
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Zebrafish
Match: abca4b (ATP-binding cassette, sub-family A (ABC1), member 4b [Source:ZFIN;Acc:ZDB-GENE-050517-4]) HSP 1 Score: 121.324 bits (303), Expect = 1.081e-30 Identity = 90/288 (31.25%), Postives = 142/288 (49.31%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWE-----DFQNELSISGGIALKF-----------------------IQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEK--LDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYS-MLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPK 774
LSDR+AIIS+GKL C GS +FLK FG G+YL +V+ Q + D +E S + ++ I +HVP+AK++E + T +LP + LF +L+ + D+G+ ++G+SDTSLEE+FLKV D G +TPE+ L +G F + + +E A S SE S + G SL ++Q L +KRFH+ R+ K F++++VLP +L+ + I P + P + ++PW+ P+
Sbjct: 1177 LSDRVAIISKGKLHCSGSPLFLKNCFGVGFYLTLVRRMKDQRKKENECDCASECSCTCSTCTRYKEESQALQPERVLDGNVESITTLIHHHVPEAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLKVTAD-----GEAANSSVTPEQWMLQQRKNGNGFMKDTGL------AEDANGVGASLESDSSEGRASRQVKGFSLVLKQFHALLVKRFHHATRSHKDFLAQIVLPASFVLIALVFTMIVPPFGEYPCLTLTPWMYGPQ 1453
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Zebrafish
Match: abca4b (ATP-binding cassette, sub-family A (ABC1), member 4b [Source:ZFIN;Acc:ZDB-GENE-050517-4]) HSP 1 Score: 117.472 bits (293), Expect = 2.569e-29 Identity = 88/285 (30.88%), Postives = 139/285 (48.77%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWE-----DFQNELSISGGIALKF-----------------------IQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPK 774
LSDR+AIIS+GKL C GS +FLK FG G+YL +V+ Q + D +E S + ++ I +HVP+AK++E + T +LP + LF +L+ + D+G+ ++G+SDTSLEE+FLKV D GE ++ DA G AS+ S D SE +++ G SL ++Q L +KRFH+ R+ K F++++VLP +L+ + I P + P + ++PW+ P+
Sbjct: 1096 LSDRVAIISKGKLHCSGSPLFLKNCFGVGFYLTLVRRMKDQRKKENECDCASECSCTCSTCTRYKEESQALQPERVLDGNVESITTLIHHHVPEAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLKVTAD--GEAANSSIMCVSGLVTDANGVG------ASLES--DSSEGRASRQVK--------------GFSLVLKQFHALLVKRFHHATRSHKDFLAQIVLPASFVLIALVFTMIVPPFGEYPCLTLTPWMYGPQ 1356
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Zebrafish
Match: abca1b (ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]) HSP 1 Score: 117.472 bits (293), Expect = 2.626e-29 Identity = 93/303 (30.69%), Postives = 136/303 (44.88%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGG----------------------------IALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIE------EIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK + ++ +D +E S G I + I HVP A+M+E+ + T VLP F +LF DLD + DLGI +YG+SDT+LEE+FLKVA+D + + + L + G + L+ D + + E E +S + G SL QQ + L KR Y RR+ K F +++VLP + + + + I P P + ++PW+
Sbjct: 1099 LGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPSLSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGTSWPESPVVPVDVTIISRLILKHVPAARMVEDQGHEITYVLPYESAKNGAFVELFHDLDDRLADLGISSYGVSDTTLEEIFLKVAEDSGVDTEMLSDGTLPVRRQRRHAFGADHQSCLKPLTEDDSFDCNESEGDPESKETDYLSGSDGKGSYQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALNPWM 1401 HSP 2 Score: 54.6842 bits (130), Expect = 4.980e-8 Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L R+AI+ G+ +C GS LK FG+G Y II++ D Q +KFI++ +P + + E+ R+ LP S + +F L + E L I Y +S T+L++VF+ A
Sbjct: 2130 LCTRMAIMVNGRFRCLGSVQHLKNRFGDG-YTIILRVAGPD-PDLQP--------VMKFIESELPGSTLKEKHRNMLQYQLPSS---LTSLAHIFSILAKNKEFLRIEDYSVSQTTLDQVFVNFA 2241
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Zebrafish
Match: abca4a (ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]) HSP 1 Score: 117.087 bits (292), Expect = 3.240e-29 Identity = 87/288 (30.21%), Postives = 130/288 (45.14%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK-----------------------------------TESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
LSDR+AIISQG+L CCGS +FLK G G+YL +V+ TE + + Q E +I AL + +HVP+A+++E + T +LP + LF +L+ + D+G+ ++G+SDTSLEEVFLKV D GE I T D+S V K + G L ++Q L IKRFH+T R+ K F++++VLP + + + I P + P + +SPW+
Sbjct: 1144 LSDRVAIISQGRLYCCGSPLFLKNCLGAGFYLTLVRRIKEQPAPVRKEGQCDCTDDCSCKCSLCTKFKASDTEKPRVSERQMEGNIESITAL--VHHHVPEARLIEVIGQELTFLLPSRAFKHRSYASLFRELEETLADMGLSSFGVSDTSLEEVFLKVTAD--GEAAHINTASDT-----------------------DRSHANGQSNSANVISKEGRGSQQVKGFFLVVKQFFALLIKRFHHTTRSGKDFLAQIVLPASFVFISLMFTLIVPPFGEYPSLTLSPWM 1404
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 119.398 bits (298), Expect = 7.080e-30 Identity = 91/279 (32.62%), Postives = 136/279 (48.75%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------IQWEDFQNELSISGGIALKF------------IQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK ++ + + ++G + L F I HVP+A+++E+ + T VLP F +LF ++D + DLGI +YG++DT+LEE+FLKVADD + K A D + RP + D ++ E R + S I +Y L +L QQ L KR Y +R+ K F +++VLP + +L+ + I P P + + PW+
Sbjct: 1091 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKKFMTGFLLLCFAGLTDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDSDMDPESRETDYLSGIDGKGSYQ-LKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPWM 1368
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 119.013 bits (297), Expect = 9.147e-30 Identity = 92/288 (31.94%), Postives = 137/288 (47.57%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGGIAL---------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK ++ ++ ED ++ S G+ I HVP+A+++E+ + T VLP F +LF ++D + DLGI +YG++DT+LEE+FLKVADD + K A D + RP + D ++ E R + S I +Y L +L QQ L KR Y +R+ K F +++VLP + +L+ + I P P + + PW+
Sbjct: 1037 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDSDMDPESRETDYLSGIDGKGSYQ-LKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPWM 1323
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 119.013 bits (297), Expect = 9.766e-30 Identity = 92/288 (31.94%), Postives = 137/288 (47.57%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGGIAL---------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK ++ ++ ED ++ S G+ I HVP+A+++E+ + T VLP F +LF ++D + DLGI +YG++DT+LEE+FLKVADD + K A D + RP + D ++ E R + S I +Y L +L QQ L KR Y +R+ K F +++VLP + +L+ + I P P + + PW+
Sbjct: 1063 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDSDMDPESRETDYLSGIDGKGSYQ-LKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPWM 1349
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 119.013 bits (297), Expect = 1.009e-29 Identity = 92/288 (31.94%), Postives = 137/288 (47.57%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGGIAL---------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK ++ ++ ED ++ S G+ I HVP+A+++E+ + T VLP F +LF ++D + DLGI +YG++DT+LEE+FLKVADD + K A D + RP + D ++ E R + S I +Y L +L QQ L KR Y +R+ K F +++VLP + +L+ + I P P + + PW+
Sbjct: 1098 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDSDMDPESRETDYLSGIDGKGSYQ-LKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPWM 1384
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 119.013 bits (297), Expect = 1.029e-29 Identity = 92/288 (31.94%), Postives = 137/288 (47.57%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGGIAL---------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK ++ ++ ED ++ S G+ I HVP+A+++E+ + T VLP F +LF ++D + DLGI +YG++DT+LEE+FLKVADD + K A D + RP + D ++ E R + S I +Y L +L QQ L KR Y +R+ K F +++VLP + +L+ + I P P + + PW+
Sbjct: 1096 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDSDMDPESRETDYLSGIDGKGSYQ-LKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPWM 1382
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Mouse
Match: Abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:MGI Symbol;Acc:MGI:2676312]) HSP 1 Score: 116.316 bits (290), Expect = 7.662e-29 Identity = 79/223 (35.43%), Postives = 123/223 (55.16%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL-KFIQNHVPDAKMMEETRSQWTIVLPQSENNCS-KFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKL-DALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
LSDRIA + QG L+CCGS +LK+ FG+GY+L + K +S + +I +A+ IQ+H+P+A + E+ + VLP S + L LD+ M L I YG+SDT++EEVFL + D S + + + LT K+ + +G + P S+ S S F ++ +V +SE L G L +++I+ + IKRFH+TRRN K I++
Sbjct: 1543 LSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLDTN----AICDTVAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVFLNLTKD-SQKSSNMSLEHLTQRKVGNPSANGTSTPDDLSVSS----SNFTDRDD--KVLTRSE----KLEGFGLLLKKIMAILIKRFHHTRRNWKGLIAQ 1750 HSP 2 Score: 55.4546 bits (132), Expect = 2.710e-8 Identity = 36/128 (28.12%), Postives = 59/128 (46.09%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYL-IIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD 384
L R+AI+ G+ QC GS +K FG G+ + + +K + E KF+Q H P + ++ S +P + + ++FD L+ L I + +S T+LEEVF+ A D
Sbjct: 2455 LCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNNKVSMETLT-----------KFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVA---NIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2568
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Mouse
Match: Abca4 (ATP-binding cassette, sub-family A (ABC1), member 4 [Source:MGI Symbol;Acc:MGI:109424]) HSP 1 Score: 114.39 bits (285), Expect = 2.676e-28 Identity = 87/293 (29.69%), Postives = 139/293 (47.44%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIV-KTESIQWE------------------------DFQNELSISGGIA--LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGE---VGGIKEKK----------LTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIISQG+L C G+ +FLK FG G+YL +V K ++IQ + + E + G + + + +HVP+AK++E + +LP + LF +L+ + DLG+ ++G+SDT LEE+FLKV +D VGG ++K+ EKL + P + K + + E V F TG L +Q + L +KRFH+T R+ K F++++VLP + + + L I P + P + + PW+
Sbjct: 1126 LGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKGFSTRCPTRVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDAGAGSMFVGGAQQKREQAGLRHPCSAPTEKLRQYAQAPHTCSPGQVDP--PKGQPSPEPEDPGVPFN--------TGARLILQHVQALLVKRFHHTIRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPALTLHPWM 1408
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Mouse
Match: Abca1 (ATP-binding cassette, sub-family A (ABC1), member 1 [Source:MGI Symbol;Acc:MGI:99607]) HSP 1 Score: 106.686 bits (265), Expect = 1.276e-25 Identity = 91/302 (30.13%), Postives = 141/302 (46.69%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTE----------------SIQWEDFQNELSISGGIA---------------LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDK-------SEFAKIE----EIRRVSFKSEITYSM-------LTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK + ++ ED ++ S G+ I+ HV +A+++E+ + T VLP F +LF ++D + DLGI +YG+S+T+LEE+FLKVA++ SG +DA T G P + + DK +E ++ +I S ++++ M L G L QQ + L KR RR+ K F +++VLP + + + + I P P + + PW+
Sbjct: 1097 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE-SG--------------VDAETSDGTLPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQLKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWM 1383 HSP 2 Score: 49.2914 bits (116), Expect = 3.077e-6 Identity = 35/130 (26.92%), Postives = 64/130 (49.23%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLII-VKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPS 390
L R+AI+ G+ +C GS LK FG+GY +++ + + + Q +F P + + E+ R+ LP S ++ ++ +F L ++ + L I Y +S T+L++VF+ A D S
Sbjct: 2110 LCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQ-----------EFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLAR---IFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQS 2225
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Mouse
Match: Abca16 (ATP-binding cassette, sub-family A (ABC1), member 16 [Source:MGI Symbol;Acc:MGI:2388711]) HSP 1 Score: 103.219 bits (256), Expect = 1.973e-24 Identity = 72/217 (33.18%), Postives = 109/217 (50.23%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVAD--DPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMK 648
L DR+AI+ +G L CCGSSVFLK+ +G GY++++ E Q+ D N +++ IQ HVP A + ++ + +LP+ S+F LF +L+ + LGI ++G S T++EEVF+KV P + I+ L K+ + N P + K F + EI V F TG+ L+ QQ L IKR + RN K
Sbjct: 709 LGDRVAIMVRGTLHCCGSSVFLKQIYGAGYHIVM---EKQQYCDVDNIIAM--------IQQHVPGAVLENNIENELSFILPKKY--VSRFETLFTELEMRQKALGIASFGASITTMEEVFVKVNKLATPQKSIQTIQPYYLAYRKMRQ-DEQQNVNMPIN----YSKPNFPYLSEIATVKFN--------TGVPLYRQQFYSLFIKRALFISRNWK 899
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Mouse
Match: Abca7 (ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]) HSP 1 Score: 103.219 bits (256), Expect = 2.028e-24 Identity = 84/301 (27.91%), Postives = 137/301 (45.51%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKT-------------ESIQWE-------------------DFQNELSISGGIA--------LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKE----KKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPK 774
L DR+A+++ G L CCGS +FL++ G GYYL +VK+ E + E D N+ G + L+ +Q HVP A+++E+ + +VLP + F +F +LD+ +E LG+ YG+SDT+LEE+FLKV +D E G + + TP+ P S+ + E AK+ + + + G +L QQ+ L KRF RR+ + +++VLP L + + + I P PP+ +SP + P+
Sbjct: 1001 LGDRVAMVAGGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHDAKGDSEDPRREKKSDGNGRTSDTAFTRGTSDKSNQAPAPGAVPITPSTARILELVQQHVPGAQLVEDLPHELLLVLPYAGALDGSFAMVFQELDQQLELLGLTGYGISDTNLEEIFLKVVEDAHREGGDSRPQLHLRTCTPQ-----------PPTGPEASVLENGELAKLVLDPQAPQGLAPNAAQVQGWTLTCQQLRALLHKRFLLARRSRRGLFAQVVLPALFVGLALFFSLIVPPFGQYPPLQLSPAMYGPQ 1290
BLAST of ATP-binding cassette sub-family A member vs. UniProt/SwissProt
Match: sp|Q86UK0|ABCAC_HUMAN (ATP-binding cassette sub-family A member 12 OS=Homo sapiens OX=9606 GN=ABCA12 PE=1 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 1.576e-27 Identity = 77/223 (34.53%), Postives = 124/223 (55.61%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL-KFIQNHVPDAKMMEETRSQWTIVLPQSENNCS-KFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKL-DALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
LSDRIA + QG L+CCGS +LK+ FG+GY+L + K +S N ++ +A+ IQ+H+P+A + E+ + VLP S + L LD M DL I YG+SDT++EEVFL + + S + + + LT +K+ ++ +G + P S+ S S F ++ ++ + E L G L +++I+ + IKRFH+TRRN K I++
Sbjct: 1543 LSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNL----NANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKE-SQKNSAMSLEHLTQKKIGNSNANGISTPDDLSVSS----SNFTDRDD--KILTRGE----RLDGFGLLLKKIMAILIKRFHHTRRNWKGLIAQ 1750 HSP 2 Score: 56.6102 bits (135), Expect = 1.009e-7 Identity = 37/128 (28.91%), Postives = 59/128 (46.09%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYL-IIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD 384
L R+AI+ GK QC GS +K FG G+ + + +K + E KF+Q H P + ++ S +P + + ++FD L+ L I + +S T+LEEVF+ A D
Sbjct: 2455 LCTRLAIMVNGKFQCIGSLQHIKSRFGRGFTVKVHLKNNKVTMETLT-----------KFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVA---NIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2568
BLAST of ATP-binding cassette sub-family A member vs. UniProt/SwissProt
Match: sp|O35600|ABCA4_MOUSE (Retinal-specific phospholipid-transporting ATPase ABCA4 OS=Mus musculus OX=10090 GN=Abca4 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.872e-27 Identity = 87/293 (29.69%), Postives = 139/293 (47.44%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIV-KTESIQWE------------------------DFQNELSISGGIA--LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGE---VGGIKEKK----------LTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIISQG+L C G+ +FLK FG G+YL +V K ++IQ + + E + G + + + +HVP+AK++E + +LP + LF +L+ + DLG+ ++G+SDT LEE+FLKV +D VGG ++K+ EKL + P + K + + E V F TG L +Q + L +KRFH+T R+ K F++++VLP + + + L I P + P + + PW+
Sbjct: 1126 LGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKGFSTRCPTRVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDAGAGSMFVGGAQQKREQAGLRHPCSAPTEKLRQYAQAPHTCSPGQVDP--PKGQPSPEPEDPGVPFN--------TGARLILQHVQALLVKRFHHTIRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPALTLHPWM 1408
BLAST of ATP-binding cassette sub-family A member vs. UniProt/SwissProt
Match: sp|Q7TNJ2|ABCA7_RAT (ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus OX=10116 GN=Abca7 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.017e-26 Identity = 84/299 (28.09%), Postives = 139/299 (46.49%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKT-ESIQWEDFQNE---------------------------------------LSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD--PSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPK 774
L DR+A+++ G L CCGS +FL++ G GYYL +VK+ +S+ D + + ++ S + L+ +Q HVP A+++EE + + LP + F +F +LD+ +E LG+ YG+SDT+LEE+FLKV ++ GE G P + L P S+ + E AK+ + S T + + G +L QQ+ L KRF RR+ + +++VLP L + + + I P PP+ +SP + P+
Sbjct: 1002 LGDRVAMVASGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHDLKGDTEDPRREKKSGSEGKTADTVLTRDGPHRSSQVPAPDAVPVTPSAALILELVQRHVPGAQLVEELPHELVLALPYAGALDGSFATVFQELDQQLERLGLTGYGISDTNLEEIFLKVVEEAHAHGEGG-------DPRQQQHLLTATPQPHTGPEASVLENGELAKLVLDPQAPKGSAPTTAQVQGWTLTCQQLRALLHKRFLLARRSRRGLFAQIVLPALFVGLALFFTLIVPPFGQYPPLQLSPAMYGPQ 1293
BLAST of ATP-binding cassette sub-family A member vs. UniProt/SwissProt
Match: sp|P78363|ABCA4_HUMAN (Retinal-specific phospholipid-transporting ATPase ABCA4 OS=Homo sapiens OX=9606 GN=ABCA4 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 2.090e-26 Identity = 85/287 (29.62%), Postives = 141/287 (49.13%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIV-KTESIQWE------------------------DFQNELSISGGI--ALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDP-SGEV--GGIKEKK--LTPEK--LDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAII+QG+L C G+ +FLK FG G YL +V K ++IQ + D E + G + + + +HVP+AK++E + +LP + LF +L+ + DLG+ ++G+SDT LEE+FLKV +D SG + GG ++K+ + P L G P+ +++ S A E + + TG L +Q + L +KRF +T R+ K F++++VLP + + + L + P + P + + PW+
Sbjct: 1126 LGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVRKMKNIQSQRKGSEGTCSCSSKGFSTTCPAHVDDLTPEQVLDGDVNELMDVVLHHVPEAKLVECIGQELIFLLPNKNFKHRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSDSGPLFAGGAQQKRENVNPRHPCLGPREKAGQTPQDSNVCS---PGAPAAHPEGQPPPEPECPGPQLNTGTQLVLQHVQALLVKRFQHTIRSHKDFLAQIVLPATFVFLALMLSIVIPPFGEYPALTLHPWI 1409
BLAST of ATP-binding cassette sub-family A member vs. UniProt/SwissProt
Match: sp|O95477|ABCA1_HUMAN (Phospholipid-transporting ATPase ABCA1 OS=Homo sapiens OX=9606 GN=ABCA1 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 7.103e-25 Identity = 89/289 (30.80%), Postives = 137/289 (47.40%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTE----------------SIQWEDFQNELSISGGIAL---------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEK-LDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEI----TYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK + G GYYL +VK + ++ ED ++ S G+ I+ HV +A+++E+ + T VLP F +LF ++D + DLGI +YG+S+T+LEE+FLKVA++ SG + L + A D + RP + D ++ E R S + +Y + G L QQ + L KR RR+ K F +++VLP + + + + I P P + + PW+
Sbjct: 1097 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE-SGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAADPNDSDIDPESRETDLLSGMDGKGSYQ-VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWM 1383
BLAST of ATP-binding cassette sub-family A member vs. TrEMBL
Match: N1PB02 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_226736 PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.904e-39 Identity = 105/281 (37.37%), Postives = 146/281 (51.96%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTE----SIQWEDFQNELSISGGIA-----LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEE---------------IRRVSFKSEITYSM-LTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMP 771
L DRIAII+QGKL C GSS+FLK FG GYYL +VK E S D + E + G A FI VP+A ++E + T LP +++ + F LF DLD + LG+++YG+SDT+LEEVFLKVA++ S E + E+ + + + LTDGG + RP + LS R ++ FA + + S T S +TG+SL +Q + + IKRF+Y RR+ K+FIS+ P M I PWLM P
Sbjct: 1092 LGDRIAIINQGKLCCVGSSLFLKSNFGGGYYLTLVKDERKGDSASTSDVKVENATEDGNAGEISTTAFIMERVPEAVLVESIGIEMTYQLPNDKSHTASFEKLFRDLDAHLSSLGLLSYGVSDTTLEEVFLKVANE-SEEANHLSEEDVR-QGTERLTDGGMYARPVTRLSFRKRNFFASKDRESNELLDADGNPDSAVSTASISCNGTGSYKVTGLSLIPRQFLAIFIKRFNYLRRSKKAFISQE-----------------------PAMEIHPWLMSP 1347
BLAST of ATP-binding cassette sub-family A member vs. TrEMBL
Match: A0A3P8NFP8 (Uncharacterized protein OS=Astatotilapia calliptera OX=8154 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.840e-37 Identity = 107/308 (34.74%), Postives = 157/308 (50.97%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK-------------------------------------TESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPA---SILSLRDKSE---------FAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLM-MPKT 777
L DRIAIIS GK++CCGSS+FLKK FG+GYYL +V+ ++S D LS G + +Q HVP+A +E + T +LP F LF +LDRAM DLG+ +YG+SDT+LEE+FLKVA+D G+ + + P K + D R A SI S+ K+E +K+E+IR+ S +++TG L QQ + L IKRFH+ RR+ K I+++VLP + + + I P ++ PP+ + PW+ +P+T
Sbjct: 1089 LGDRIAIISHGKMRCCGSSIFLKKCFGSGYYLTLVRDGSGKMTAQRNGIISQAKGGKKETDCPLSSSPDEGFGSQSWSNSDPSANLSAVG----QLVQRHVPEAIFLESIGQEITYILPYGGAKDGTFGTLFRELDRAMADLGLTSYGISDTTLEEIFLKVAEDT-----GV-DADIQPTKELFVRDSKRRSREAKRNSIASVHSKTEQTTGKSEKFTSKVEDIRKSPSDSGRGSAVITGWKLIRQQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFTEFPPLELQPWMYGLPQT 1386
BLAST of ATP-binding cassette sub-family A member vs. TrEMBL
Match: A0A4U5VYY4 (ATP-binding cassette sub-family A member 1 OS=Collichthys lucidus OX=240159 GN=D9C73_027198 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.089e-36 Identity = 93/261 (35.63%), Postives = 146/261 (55.94%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL--KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLM-MPKT 777
L DRIAIIS GK++CCGSS+FLKK FG+GYYL +V+ E I+ Q I + + ++ HVP+A +E + T +LP + F LF +LD AM DLG+ +YG+SDT+LEE+FLKVA+D +G + + K T +K+E++++ + S +++TG L +Q + L IKRFHY RR+ K I+++VLP + + + + I P ++ P + + PW+ +P+T
Sbjct: 1120 LGDRIAIISHGKMRCCGSSIFLKKCFGSGYYLTLVR-EGIEKMTAQRNGIIHADLTAVGQLVRRHVPEAAFLESIGQEITYILPYTGARDGTFALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAED-TGVDAEMNKLKFT----------------------------SKVEDLKKNASVSGKGSTVITGWKLIRRQFLALFIKRFHYARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPNLELQPWMYGLPQT 1350
BLAST of ATP-binding cassette sub-family A member vs. TrEMBL
Match: A0A0P4ZVF7 (ATP-binding cassette sub-family A member OS=Daphnia magna OX=35525 GN=APZ42_019391 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.266e-35 Identity = 98/269 (36.43%), Postives = 148/269 (55.02%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESI---------QWEDFQ---NELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSE----NNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIISQG+L+CCGSS+FLK++ G+GYYL +V+ + Q + Q N + I + ++ H+P+A ++E S LP+ + +KFP LFD+LD ME L + +YG+SDT+LEE+FL+VADDPS + NFP P S+ L D++ + + E SF E + L G L QQ+ + IKRF+ ++RN+K F E+VLP +++++ + PP+V+SPWL
Sbjct: 1030 LGDRIAIISQGQLKCCGSSLFLKQKLGSGYYLTVVRKDDTSHDGPINNGQANENQVPRNAMEIDTERIVTLVKRHIPNATIVENVGSDIVFCLPEFDEAGLRQRNKFPHLFDELDLNMEQLRVDSYGVSDTTLEEIFLRVADDPSAD--------------------SNFP-PPSVSDLGDENPYRE-ENGGSDSFNLE-SNEKLKGKKLVAQQMKAMYIKRFNNSKRNVKGFFCEIVLPCILVIIGELFSLTLDLETPQPPLVLSPWL 1275
BLAST of ATP-binding cassette sub-family A member vs. TrEMBL
Match: A0A482DHK7 (ATP-binding cassette sub-family A member 1 isoform X2 OS=Daphnia magna OX=35525 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.552e-35 Identity = 99/272 (36.40%), Postives = 149/272 (54.78%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIA-----------LKFIQNHVPDAKMMEETRSQWTIVLPQSEN----NCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDK----SEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIISQG+L+CCGSS+FLK++ G+GYYL +VK + Q N + ++ + ++ H+ + ++E S LP+ ++ KFP LFD+LD ME L + +YG+SDT+LEE+FLKVA+DPS +E TP + D +T G+ P S+ + + E +IE + ++ LTG L QQ I L +KRF ++RN+K F E+VLP L+I++ S +S P + +SPWL
Sbjct: 1100 LGDRIAIISQGQLKCCGSSLFLKQKLGSGYYLTVVKKDG-QSASVDNAQATENPVSQNSTETDVERIVNVVKRHIQNGSVVENVGSDIVFCLPEFDDAGLRQRDKFPHLFDELDLNMEQLRVDSYGVSDTTLEEIFLKVANDPS------EENVTTPLETDQVT-SGDLPVLKSLQKIGTRECVYEEVPQIEGNDTSDTFNLLSSEKLTGSVLICQQFIALYVKRFCNSKRNLKGFFCEIVLPALLIIINQLTTMSLSAISPEPSIELSPWL 1363
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Cavefish
Match: zgc:172302 (zgc:172302 [Source:ZFIN;Acc:ZDB-GENE-081205-5]) HSP 1 Score: 122.479 bits (306), Expect = 4.507e-31 Identity = 91/255 (35.69%), Postives = 135/255 (52.94%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFP--RPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIISQGKL CCGSS+FLK G GYYL VK E + S SG + Q++V A+++E+ + I LP + + +LD+ + GI++YGLSDT+LEE+FLKVA++ V ++ TP + + G P R A + + + + + +E +S + S LTG L QQ+ L KR Y R+ K FI+++VLP L IL+ + I P+ P + + PW+
Sbjct: 1002 LGDRIAIISQGKLCCCGSSLFLKSHLGTGYYLTAVKKEL----QSRTPTSASGNGLVALAQHYVSGARLVEDVGREVVINLPHAASEDGTLALFLAELDKRQAEFGIISYGLSDTTLEEIFLKVAEETG--VDAEPDEAATPPAVSP-SQQGEPPEDRDAVLFNQQVSLLYTEAQETDPLSGDGRGSVS-LTGWGLTWQQLRALFTKRLLYATRSRKGFIAQIVLPALFILIDLLFSLIVPPMGKYPALELQPWM 1248 HSP 2 Score: 50.0618 bits (118), Expect = 1.358e-6 Identity = 35/120 (29.17%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEV 363
L R+AI+ G+ QC GS LK FG+GY +I+ + + + + +I+N + E + LP N+CS +FD L E+LG+ Y +S T+L++V
Sbjct: 1961 LCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSAPPK-----DPCPVDA-----YIKNSFTGIVLKERHHNVLQYQLP--SNSCS-LARVFDVLSNNYEELGVTDYSISQTTLDQV 2067
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Cavefish
Match: ENSAMXT00000016919.2 (pep primary_assembly:Astyanax_mexicanus-2.0:8:9912642:9956080:1 gene:ENSAMXG00000016432.2 transcript:ENSAMXT00000016919.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 121.324 bits (303), Expect = 9.726e-31 Identity = 93/292 (31.85%), Postives = 139/292 (47.60%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTES----------------IQWEDFQNELSISGGIALK----------------FIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIE---EIRRVSFKS----EITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS+FLK G GYYL +VK E ++ +D +E S G+ I HVP+A+M+E+ + T +LP F +LF D+D + DLGI +YG+SDT+LEE+FLKVA+D + + + + G + L+ D+ + + E E R + S + +Y + G SL QQ + L KRF Y RR+ K F +++VLP + + + + I P P + + PW+
Sbjct: 992 LGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKEPEASLSSCRNSSSTVSYVKKDDEASESSSDAGLGSDHESDAATAIDISLISGLIIKHVPNARMVEDLGHEITYILPYESAKDGAFVELFHDMDDHLADLGISSYGVSDTTLEEIFLKVAEDSGVDTEILSDGTFPIRRRRRHAFGADHQSCLKPLTEDDRYDGNESEVDPESRETDYLSGSDGKGSYQ-IQGWSLKRQQFLALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALQPWM 1282 HSP 2 Score: 57.3806 bits (137), Expect = 4.950e-9 Identity = 41/129 (31.78%), Postives = 64/129 (49.61%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPS 390
L R+AI+ G+ +C GS LK FG+G Y II++ D Q +KFI++ +P + + E+ R+ LP S S +F L + + L I Y +S T+L++VF+ A D S
Sbjct: 2005 LCTRMAIMVNGRFRCLGSVQHLKNRFGDG-YTIILRVAGPD-PDLQP--------VMKFIESELPGSTLKEKHRNMLQYQLPSS---VSSLAHIFSILAKHKDFLRIEDYSVSQTTLDQVFVNFAKDQS 2120
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Cavefish
Match: abca4a (retinal-specific ATP-binding cassette transporter-like [Source:NCBI gene;Acc:103024609]) HSP 1 Score: 118.627 bits (296), Expect = 8.569e-30 Identity = 83/286 (29.02%), Postives = 137/286 (47.90%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK--------TESIQWEDFQNELSISGGIALKF-------------------------IQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
LSDR+AIISQG+L CCGS +FLK G G+YL +V+ T D +++ S I ++ + +HVP+A+++E + T +LP + LF +L+ + D+G+ ++G+SDTSLEE+FLKV D +G K A +G +P + S + + ++ + G+SL ++Q + L IKRFH+T R+ K F +++VLP +L+ + I P + P + +SPW+
Sbjct: 1176 LSDRVAIISQGRLHCCGSPLFLKSMLGAGFYLTLVRRMKDDTPPTRKEGQCDCKDDCSCKCSICTEYKESTCGQTKSAGRQMDGDVETITNLVHHHVPEARLVEAVGQELTFLLPSRGFKHRAYASLFRELEETLADIGLSSFGVSDTSLEEIFLKVTADGETSLGKSAADK------KACANG----QPTAGGSSSGEGQGSR----------------QVKGVSLVVKQFLALLIKRFHHTTRSGKDFFAQIVLPASFVLVSLMFTLIVPPFGEYPSLTLSPWI 1435
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Cavefish
Match: abca4a (retinal-specific ATP-binding cassette transporter-like [Source:NCBI gene;Acc:103024609]) HSP 1 Score: 118.242 bits (295), Expect = 1.048e-29 Identity = 87/299 (29.10%), Postives = 142/299 (47.49%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK--------TESIQWEDFQNELSISGGIALKF-------------------------IQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEI--RRVSFKSEIT-----------YSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
LSDR+AIISQG+L CCGS +FLK G G+YL +V+ T D +++ S I ++ + +HVP+A+++E + T +LP + LF +L+ + D+G+ ++G+SDTSLEE+FLKV D +G + L AL + +S+ RD + EE ++ + T + G+SL ++Q + L IKRFH+T R+ K F +++VLP +L+ + I P + P + +SPW+
Sbjct: 1176 LSDRVAIISQGRLHCCGSPLFLKSMLGAGFYLTLVRRMKDDTPPTRKEGQCDCKDDCSCKCSICTEYKESTCGQTKSAGRQMDGDVETITNLVHHHVPEARLVEAVGQELTFLLPSRGFKHRAYASLFRELEETLADIGLSSFGVSDTSLEEIFLKVTADGETSLGK------SAADLRALQETSR----SSV--FRDTTVTVNTEEPEDKKACANGQPTAGGSSSGEGQGSRQVKGVSLVVKQFLALLIKRFHHTTRSGKDFFAQIVLPASFVLVSLMFTLIVPPFGEYPSLTLSPWI 1462
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Cavefish
Match: ENSAMXT00000022236.2 (pep primary_assembly:Astyanax_mexicanus-2.0:21:13397857:13560117:1 gene:ENSAMXG00000021540.2 transcript:ENSAMXT00000022236.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 114.39 bits (285), Expect = 2.383e-28 Identity = 87/274 (31.75%), Postives = 136/274 (49.64%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKT--------ESIQWEDFQNELSISGGIAL-------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALT-DGGNFPRPASILSL-----RDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS G++ CCGSS+FLKK +G+GYYL +V+ Q +DF + I G +L ++ HVP+A +E + +LP + + F LF +LD E LGI +YG+SDTSLEEV + L+ + D L D R + S+ + + E +K ++ R+ + S+++G L Q + L IKRFH+ RR+ K I+++VLP + + + I P + P + + PW+
Sbjct: 858 LGDRIAIISHGRVCCCGSSLFLKKTYGSGYYLTLVQANQERGARKHQSQCDDFSLDEGI-GSSSLSNVADLSALVRRHVPEAVFLEVLGQELVYILPYTGSKDGSFASLFKELDLEKERLGISSYGISDTSLEEVH---------TLAQTHTHTLSIQYKDTLVRDWKRSSRESRTHSISSAMEQKEKESSKCDDQRQSVCLNGKGSSVMSGWPLIRHQFLALFIKRFHHARRSRKGIIAQVVLPAFFVCLSLIFSLIVPPFVEYPSLELQPWM 1121
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002495.1 (pep scaffold:Pmarinus_7.0:GL480265:53:27909:1 gene:ENSPMAG00000002218.1 transcript:ENSPMAT00000002495.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 136.346 bits (342), Expect = 1.041e-36 Identity = 92/278 (33.09%), Postives = 143/278 (51.44%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK--------------TESIQWEDFQNELSISGGIAL-------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPE--KLDAL--TDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS G+L+CCGSS+FLK FG GYYL +VK S E F ++ S IA + +Q HVPDA+++E + T +LP F LF +LD + +LG+ +YG+SDT+LEE+FLKVA++P+ KL+ K L G + S + +E ++E++ + K ++G+ L + Q L IKRFH+ RR+ K F+++++LP + + + + I P P + + PW+
Sbjct: 560 LGDRIAIISHGRLRCCGSSLFLKNAFGAGYYLTMVKRSGSGGSNSSCLAGLASSSDEGFGSDESNPDSIAANHVSSVTRLLQQHVPDARLIENFGQELTYLLPSHGAKDGTFALLFKELDEKLAELGVSSYGVSDTTLEEIFLKVAEEPAANSHFTNGVKLSARNSKYTYLQPVHAGCICKNYSTCK-KAPAELGELEKLNELDGKGT---QQISGVQLILLQFKALFIKRFHHARRSRKGFVAQIILPAVFVCLALVFSLIIPPFGKYPMLQLQPWM 833
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Sea Lamprey
Match: abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]) HSP 1 Score: 62.7734 bits (151), Expect = 1.724e-11 Identity = 65/273 (23.81%), Postives = 107/273 (39.19%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIAL------------KFIQNHVPDAKMME------ETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFL---KVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPA--SILSLRDKSEFAKIEEIRRVSFKSE-----------------------------------ITYSMLTGISLFIQQIIGLQIKRFHYTRRNMK 648
LSDRIA++ GKL+CCGS +LK+ +G G L + K + L +S + L +++ V A + + +LP N L+ ME+LG+ Y +SDT+LEEV L +V +P+ + TP +L P S L ++E ++++I S ++E + +TGI L +++ L KRFH+ RR++K
Sbjct: 580 LSDRIAVLEHGKLRCCGSPQYLKEIYGQGLTLTLTKKVRV--------LCLSQSVTLGSRPPFDPERVVSLVRSGVAGAALKSGEDSSGNRNADMVFLLPAHSQNVLG-QSFLVTLEENMEELGLSGYAISDTTLEEVCLRQQRVMSEPALGCSA-SARYFTPTSAASLLTKATQCGPGLYSCSQLVQEAEDQRLKDITNKSPEAESGSINSETAAPPDHTSPAASSILCLSSLWRTEKHLVKKERVTGIHLLVRKTQALIYKRFHHWRRDVK 842 HSP 2 Score: 60.4622 bits (145), Expect = 9.147e-11 Identity = 39/130 (30.00%), Postives = 65/130 (50.00%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIA-----LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L D++AI+ G+ +C G+ LK FGNG+ + +L +S G + +FI +H P A + E+ SQ +P +N K ++F L++ E L I Y +S T+L++VF+ A
Sbjct: 1650 LCDKLAIMVNGQFKCLGTLQHLKNRFGNGHMI---------------KLRLSSGNSKVTEVTEFITSHFPGAYLKEQHISQLEFQVP---SNAGKLSEIFIALEKEKESLSIQHYSISQTTLDQVFINFA 1761
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006855.1 (pep scaffold:Pmarinus_7.0:GL486953:391:4596:1 gene:ENSPMAG00000006189.1 transcript:ENSPMAT00000006855.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.447 bits (119), Expect = 1.243e-7 Identity = 35/132 (26.52%), Postives = 60/132 (45.45%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLE---EVFLKVADDPS 390
L R+AI+ G +C GS LK FG+GY + I ++ ++ L+F PDA + E T V Q ++ +F +++ ++ LG+ Y +S T+L+ +VF+ A S
Sbjct: 189 LCTRLAIMVNGHFKCLGSIQHLKNRFGDGYMITIRTRSTLHVKE-----------VLRFFSRSFPDAVLKER---HHTKVQYQLKSETLSLAAVFTKMEQVLDVLGVEDYSVSQTTLDNDPQVFVNFAKKQS 306
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010397.1 (pep scaffold:Pmarinus_7.0:GL480213:155963:163950:1 gene:ENSPMAG00000009413.1 transcript:ENSPMAT00000010397.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.0618 bits (118), Expect = 1.470e-7 Identity = 35/126 (27.78%), Postives = 62/126 (49.21%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLII-VKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVA 378
L RIAI+ G+ +C GS LK +G+GY L+ ++ E + F++ F++ P + + ++ Q + ++ N S + +F L++A D + Y +S SLE+VFL A
Sbjct: 181 LCTRIAIMVNGQFRCLGSQQHLKSRYGSGYTLLARIRAEQADTQPFKH-----------FVETTFPGSILKDQ--HQGLVHYHLTDMNMS-WAQVFGMLEKAKRDYCLDDYSISQISLEQVFLGFA 292
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006988.1 (pep scaffold:Pmarinus_7.0:GL478499:147909:176415:-1 gene:ENSPMAG00000006318.1 transcript:ENSPMAT00000006988.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.595 bits (109), Expect = 3.250e-6 Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIV 108
L+D A++SQG+L+C GSS+FLK +FG GY L ++
Sbjct: 648 LADWKAVLSQGRLKCAGSSLFLKTKFGVGYRLTLI 682
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Nematostella
Match: EDO46878 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNL9]) HSP 1 Score: 135.576 bits (340), Expect = 3.730e-36 Identity = 86/254 (33.86%), Postives = 130/254 (51.18%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKT------ESIQWED-------------------------FQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGN---FPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
L DRIAIISQGKLQCCG+S+FLK +GNGYYL + K +S+ + + NE S++ FI++H+P A ++E ++ T VLP KF D+F++LDR + L + +YG+SDT+LEEVFLKVA++ E G + P + T + +P + ++ S +E R S G++L ++Q L +KRFH+ RRN K+FI++
Sbjct: 568 LGDRIAIISQGKLQCCGTSLFLKSHYGNGYYLTLTKKTPGLGLDSVDASERDSLGSRSSDSDPISDSVLGDYSDVYCNEKSVT-----SFIKSHIPSASLVEHVGTELTYVLPSHAAKEGKFQDMFEELDRNLHKLHVGSYGVSDTTLEEVFLKVAEEAQSEEAGTSAE--VPVRRSTFTFSSHPVKCLQPPAQGDSKNDSVDGSLEFDDRES-----------GLALLLRQFFALLVKRFHHCRRNRKAFIAQ 803 HSP 2 Score: 46.9802 bits (110), Expect = 4.357e-6 Identity = 34/128 (26.56%), Postives = 62/128 (48.44%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLII-VKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD 384
L +R+AI+ G+++C GS LK +FG+GY +I+ V + E +FI P+A + ++ + +P + S+ LF L+ + I Y ++ T+L++VF+ A D
Sbjct: 1523 LCNRVAIMVNGQMKCLGSPQHLKNKFGDGYTVILRVAGSNPDTEQ-----------VCQFIIQCFPNAVLKDKHHNMVEYQIPCQGLSVSR---LFGHLEANRKMFDIEDYSVTQTTLDQVFINFAKD 1636
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Nematostella
Match: EDO38879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBQ0]) HSP 1 Score: 99.7525 bits (247), Expect = 8.979e-24 Identity = 81/272 (29.78%), Postives = 115/272 (42.28%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALK-----------FIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKV---------------------------ADDPSGEVGGIKEKKLTP--------EKLDALTDGGNFP------RPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
L DRIAIIS GKL+C GS ++LK+ FG GY L +VK S L+ FI +H+ A++ +T ++T +LP + F LF DL++ ++ LGI +YG++ T LEEVFLKV AD P G +G + P E D + + G +P S + + + + LTG +L QQ L +KRFHY RRN K IS+
Sbjct: 800 LGDRIAIISSGKLRCVGSPLYLKRRFGEGYNLTLVKKSISSPHGSIGSFRRSTSSNLEASRRSEEKLTSFITSHISSAQLKHKTNQEFTFILPDNSIKRGAFKKLFADLEQNIDVLGIDSYGITHTLLEEVFLKVTDVSLNETGNMPHHRQDKLPTQLLQFPADKP-GHLGHVLLSPPLPTLPTNEGLEMSDVVRNRGEDTERLLGYQPLSDSGTHQGNLYNEASNGHAAGLFEGVGSHTLTGSALQWQQFYALMLKRFHYARRNFKGVISQ 1070
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Nematostella
Match: EDO48951 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI12]) HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-20 Identity = 70/222 (31.53%), Postives = 111/222 (50.00%), Query Frame = 1
Query: 1 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIE-EIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISE 663
+L DRIAI++ G+L+CCGSS+FLK +G GY+L +VK ED + I+ ++ VP A+++ ++ VL + F LF L+ ED GI +YG+S T++EEVF+KV + V I L ILS + + I+ +I R+ KS Y + TG +L Q + +KRF ++R+ KS +++
Sbjct: 697 FLGDRIAIMADGQLRCCGSSLFLKSRYGVGYHLTLVKK-----EDCDDNAIINA------VRETVPSAQVLSNVGAEIEFVLNGEASK--DFESLFVKLENNKEDYGIASYGVSCTTMEEVFMKVGEGSEKTVEDILNLLL------------------RILSSQSLLRYQNIKIKILRL-LKSN--YPLQTGFALQWQHYKAMLVKRFINSKRDKKSVVTQ 884 HSP 2 Score: 62.3882 bits (150), Expect = 3.972e-11 Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGE 396
L R+AI+ G+ +C GS+ LK FG GY L++ K E+ E +F+ + P A+++E T + +E + S+ +F +L+R L IV Y +S TSLE+VFL +A + E
Sbjct: 1609 LCTRLAIMVNGQFKCVGSAQHLKSRFGMGYTLML-KVEARLVPVSNTE---------QFVSSTFPGAQLLESHNGMLTYQINSTELSWSR---IFGELERNRASLNIVDYSVSQTSLEQVFLNLAKEQYSE 1726
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Nematostella
Match: EDO32071 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW57]) HSP 1 Score: 68.1662 bits (165), Expect = 2.141e-13 Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWE----DFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKE 414
L R+ I+ +G+L+C GS+ LK +FG+GY L I + S Q D Q +L + F++ P+AK E + +P+S N SK F L+ +GI Y S ++LE+VFL+ A + + G K+
Sbjct: 181 LCSRVGIMVKGQLKCLGSTQHLKSKFGSGYTLEIKLSPSFQSSDPDVDMQTQL-------VAFVEGLFPNAKRTESFGDRVIYKVPKS--NVSKLSSTFATLEEGKRSIGIEEYSFSQSTLEQVFLEFAREQDDDRTGAKD 312
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Nematostella
Match: EDO28092 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T7F9]) HSP 1 Score: 57.3806 bits (137), Expect = 2.955e-10 Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLII-VKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEV 363
L R+AI+ G+ +C GS+ LK FG GY L++ V+ + + + A +F+ + P A+++E T + +E + S+ +F +L+R L IV Y +S TSLE+V
Sbjct: 73 LCTRLAIMVNGQFKCVGSAQHLKSRFGMGYTLMLKVEARLVPVSNTEQ--------AQQFVSSTFPGAQLLESHNGMLTYQINSTELSWSR---IFGELERNRASLNIVDYSVSQTSLEQV 182
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Medaka
Match: ENSORLT00000045391.1 (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:101164844]) HSP 1 Score: 137.117 bits (344), Expect = 3.401e-36 Identity = 99/308 (32.14%), Postives = 153/308 (49.68%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK----------------------TES-------------IQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSL----------RDKSEFA-----KIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKT 777
L DRIAIIS GK++CCGSS+FLKK FG+GYYL +V+ TES Q D N + +F++ HVP+A +E + T +LP + F LF +LD+ M+ LG+ +YG+SDT+LEE+FLKVA+D G+ +K+L+P K + D R + S+ K E K+E+ ++ + + ++TG L QQ + L IKRFH+ RR+ K I+++VLP + + + + I +D P + + PW+ +T
Sbjct: 752 LGDRIAIISHGKMRCCGSSIFLKKSFGSGYYLTLVRSGTEVMTAQRSGIISGIAEEKPTESDCPSSSSLDEDRGCQSSDNSNPTDLKH--VTQFVRRHVPEAVFLESIGQEITFILPYARARDGTFATLFQELDKVMDKLGLTSYGVSDTTLEEIFLKVAEDT-----GV-DKELSPTKEPVVKDYKKDSRESKRRSMSRFHGKAAKGNTKDELKKKLSNKVEDFKKSASVNGRGSVVITGWKLIRQQFLALFIKRFHHARRSRKGLIAQVVLPAIFVCLALVFSLIVPSFTDYPSLELQPWMYNSQT 1051 HSP 2 Score: 50.0618 bits (118), Expect = 1.379e-6 Identity = 39/137 (28.47%), Postives = 61/137 (44.53%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIA--LK----FIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGE 396
L R+AI+ G+ QC GS LK FG+GY LI+ GG LK F++ P + E+ + L E +K +F +L ++LG+ Y +S T+L++VF+ A + E
Sbjct: 1755 LCTRMAIMVNGRFQCLGSIQHLKNRFGDGYTLIVR----------------VGGCPPDLKPVEDFVEETFPGTVLKEKHHNTLQYQLLSQEGALAK---IFTELTDHQQELGLEDYSVSQTTLDQVFVNFAKEQHDE 1872
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Medaka
Match: ENSORLT00000046301.1 (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:101164844]) HSP 1 Score: 137.117 bits (344), Expect = 3.708e-36 Identity = 99/308 (32.14%), Postives = 153/308 (49.68%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK----------------------TES-------------IQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSL----------RDKSEFA-----KIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKT 777
L DRIAIIS GK++CCGSS+FLKK FG+GYYL +V+ TES Q D N + +F++ HVP+A +E + T +LP + F LF +LD+ M+ LG+ +YG+SDT+LEE+FLKVA+D G+ +K+L+P K + D R + S+ K E K+E+ ++ + + ++TG L QQ + L IKRFH+ RR+ K I+++VLP + + + + I +D P + + PW+ +T
Sbjct: 752 LGDRIAIISHGKMRCCGSSIFLKKSFGSGYYLTLVRSGTEVMTAQRSGIISGIAEEKPTESDCPSSSSLDEDRGCQSSDNSNPTDLKH--VTQFVRRHVPEAVFLESIGQEITFILPYARARDGTFATLFQELDKVMDKLGLTSYGVSDTTLEEIFLKVAEDT-----GV-DKELSPTKEPVVKDYKKDSRESKRRSMSRFHGKAAKGNTKDELKKKLSNKVEDFKKSASVNGRGSVVITGWKLIRQQFLALFIKRFHHARRSRKGLIAQVVLPAIFVCLALVFSLIVPSFTDYPSLELQPWMYNSQT 1051 HSP 2 Score: 50.0618 bits (118), Expect = 1.523e-6 Identity = 39/137 (28.47%), Postives = 61/137 (44.53%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIA--LK----FIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGE 396
L R+AI+ G+ QC GS LK FG+GY LI+ GG LK F++ P + E+ + L E +K +F +L ++LG+ Y +S T+L++VF+ A + E
Sbjct: 1755 LCTRMAIMVNGRFQCLGSIQHLKNRFGDGYTLIVR----------------VGGCPPDLKPVEDFVEETFPGTVLKEKHHNTLQYQLLSQEGALAK---IFTELTDHQQELGLEDYSVSQTTLDQVFVNFAKEQHDE 1872
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Medaka
Match: abca4a (retinal-specific ATP-binding cassette transporter [Source:NCBI gene;Acc:101171449]) HSP 1 Score: 117.472 bits (293), Expect = 2.061e-29 Identity = 83/276 (30.07%), Postives = 132/276 (47.83%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIV---------------------KTESIQWEDFQNELSISGGIA--LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
LSDR+AI+SQG+L CCGS +FLK FG G+YL +V K ++ LS +G I + + +HVP A+++E + T +LP + LF +L+ + D+G+ ++G+SDTSLEE+FLKV D + +K PE N P+ I K R S++ + G+ L ++Q + L IKR H+ R+ K F++++VLP + + I P + P + +SPW+
Sbjct: 1111 LSDRVAILSQGRLYCCGSPIFLKNCFGAGFYLTLVRRMKNDPPKVGRKPPVCFCAFKARAVSSNSKTAFLS-TGNIESIMALVHHHVPQARLIETIGQELTFLLPNQNFQPRAYASLFRELEETLVDIGLSSFGVSDTSLEEIFLKVTADGT-------NRKCIPES--------NGQDPSQI----------KEGSAGRGSYR-------VRGVCLTVKQFLALLIKRLHHATRSYKDFVAQIVLPASFVFFSLMFNLIVPPFGEYPSLTLSPWM 1353
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Medaka
Match: zgc:172302 (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101162276]) HSP 1 Score: 115.161 bits (287), Expect = 1.324e-28 Identity = 89/287 (31.01%), Postives = 140/287 (48.78%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESI----------------------QWEDFQNELSISGGIA-----------LKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSM-LTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS+GKL CCGS +FLK + G+GYYL +VK E +D ++ LS G+ L +Q H+P A ++EE+R + I LPQ LD+ + +LGI +YGLSD++LEE+FL+VA++ +G ++++L+P N +P+ +E + E + + L+G L QQ+ L IKR+ Y RR+ + F +++VLP L +L+ + I P P + + PW+
Sbjct: 1126 LGDRIAIISKGKLCCCGSPLFLKSQLGSGYYLTVVKREETNPNTPSGSSFSTSTSIITNKLPHAKDSESSLSEDTGLGSDESSSCVAALLALVQQHIPSASLVEESRREAVINLPQKAAKDGSLAIFLSKLDQRLPELGISSYGLSDSTLEEIFLRVAEE-TGVDAEPEQEELSP----------NSQQPSGERVEEQPAEQPEPEPLETDLLSGDCRGGEPLSGSWLMWQQLKALFIKRWLYARRSRRGFFAQIVLPALFVLVALLFSLIVPPFGRYPSVELQPWM 1401 HSP 2 Score: 55.4546 bits (132), Expect = 2.283e-8 Identity = 38/133 (28.57%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLII------VKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADD 384
L R+AI+ G+ QC GS LK FG+GY +I+ TES ++ ++ P+ ++ E+ ++ LP + CS +FD L E+LG+ + +S T+L++VF+ A D
Sbjct: 2131 LCTRMAIMVNGQFQCLGSVQHLKNRFGDGYTVILRLADTKSDTESCPVDE--------------YMTKSFPNIELKEQHQNVLQYHLP--SHGCS-LALIFDALANNCEELGVADFSVSQTTLDQVFISFAKD 2246
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Medaka
Match: ENSORLT00000025407.2 (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101163308]) HSP 1 Score: 111.694 bits (278), Expect = 2.061e-27 Identity = 96/310 (30.97%), Postives = 138/310 (44.52%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVK---------------TESIQWEDFQN-----------------ELSISGGIAL----------------KFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTD---GGNFPRPASILSLRDKSEFAKIE------EIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWL 762
L DRIAIIS GKL C GSS++LK + G+GYYL +VK T S +D +N +I G A I HVP A+++E+ + T +LP S F +LF DLD + +LGI +YG+SDT+LEE+FLKVA+D + + + L P + T GG +S D + E E +S + G SL QQ + L KRF Y RR+ K F +++VLP + + + + I P P + + PW+
Sbjct: 1103 LGDRIAIISHGKLCCVGSSLYLKNQLGSGYYLTLVKKDPETSLSSCRNSSSTISFNKKDEENTSVSSSDAGLGSEHESEAATIENGPAASICTVPFVPTDTSLVSALILRHVPTARLVEDLGHELTYILPYSAAKNGAFVELFKDLDLKLHELGISSYGVSDTTLEEIFLKVAEDNGVDTEVLSDGTL-PVRARRRTHAFGGGEHQSCLKPISEDDTYDCNDSEGDPDCRETDWLSCTEGKGSYQVNGWSLRRQQFVALMWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWM 1411 HSP 2 Score: 52.373 bits (124), Expect = 2.614e-7 Identity = 37/134 (27.61%), Postives = 63/134 (47.01%), Query Frame = 1
Query: 4 LSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGG-----IALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPS 390
L R+AI+ G+ +C GS LK FG+GY +I L ++G +KFI++ + + + E+ R+ LP S + +F L + + L I Y ++ T+L++VF+ A D S
Sbjct: 2140 LCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTII---------------LRVAGPDPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSS---LTSLAHIFSILAKNKDTLRIEDYSVTQTTLDQVFVNFAKDQS 2255
BLAST of ATP-binding cassette sub-family A member vs. Planmine SMEST
Match: SMESG000068605.1 (SMESG000068605.1) HSP 1 Score: 492.271 bits (1266), Expect = 4.833e-161 Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 1
Query: 1 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKTR 780
YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTI LPQSENNCSKFPDLFD+LDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFI+ELVLPVLMILMIIGLLNISSPLSDAPPMVISPWLMMPKTR
Sbjct: 907 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIALPQSENNCSKFPDLFDNLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFIAELVLPVLMILMIIGLLNISSPLSDAPPMVISPWLMMPKTR 1166
BLAST of ATP-binding cassette sub-family A member vs. Planmine SMEST
Match: SMESG000032896.1 (SMESG000032896.1) HSP 1 Score: 305.449 bits (781), Expect = 6.197e-95 Identity = 165/260 (63.46%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 1 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKTR 780
YLSDRIAIISQGKLQCCGSSVFLKKEFG+GYYLI+VK Q EDF++ +S SG L FI+ H+ DAKM+EETR+QWTIVLPQ+E N KF DLF D+DR++ L V+YGLSDTSLEEVFLKVADDP+G V IK+K++T E LD+LTD GNFPRP+S LS RDK EF + +++ + ++S S+LTG +L QQ++GLQ+KRFHYT+RN+K F++ELVLP+L+I+++I ISS L+ PPM ISPWLMMPK R
Sbjct: 871 YLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIRAHITDAKMIEETRTQWTIVLPQNEINIGKFSDLFADIDRSLSGLNFVSYGLSDTSLEEVFLKVADDPAGSVQEIKDKQITAEDLDSLTDDGNFPRPSSRLSFRDKLEFPRFDDLNSIPYESGAPSSLLTGSALLRQQLLGLQVKRFHYTKRNIKGFVAELVLPILLIVVMIAFSKISSNLNYQPPMEISPWLMMPKAR 1130
BLAST of ATP-binding cassette sub-family A member vs. Planmine SMEST
Match: SMESG000032896.1 (SMESG000032896.1) HSP 1 Score: 305.064 bits (780), Expect = 8.199e-95 Identity = 165/260 (63.46%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 1 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKTR 780
YLSDRIAIISQGKLQCCGSSVFLKKEFG+GYYLI+VK Q EDF++ +S SG L FI+ H+ DAKM+EETR+QWTIVLPQ+E N KF DLF D+DR++ L V+YGLSDTSLEEVFLKVADDP+G V IK+K++T E LD+LTD GNFPRP+S LS RDK EF + +++ + ++S S+LTG +L QQ++GLQ+KRFHYT+RN+K F++ELVLP+L+I+++I ISS L+ PPM ISPWLMMPK R
Sbjct: 868 YLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIRAHITDAKMIEETRTQWTIVLPQNEINIGKFSDLFADIDRSLSGLNFVSYGLSDTSLEEVFLKVADDPAGSVQEIKDKQITAEDLDSLTDDGNFPRPSSRLSFRDKLEFPRFDDLNSIPYESGAPSSLLTGSALLRQQLLGLQVKRFHYTKRNIKGFVAELVLPILLIVVMIAFSKISSNLNYQPPMEISPWLMMPKAR 1127
BLAST of ATP-binding cassette sub-family A member vs. Planmine SMEST
Match: SMESG000032861.1 (SMESG000032861.1) HSP 1 Score: 303.908 bits (777), Expect = 2.726e-94 Identity = 165/260 (63.46%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 1 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKTR 780
YLSDRIAIISQGKLQCCGSSVFLKKEFG+GYYLI+VK Q EDF++ +S SG L FI+ H+ DAKM+EETR+QWTIVLPQ+E N KF DLF D+DR++ L IV+YGLSDTSLEEVFLKVADDP+G V IK+K++T E LD+LTD GNFPRP+S LS R K EF + +++ + ++S S+LTG +L QQ++GLQ+KRFHYT+RN+K F++ELVLP+L+I+++I ISS L+ PPM ISPWLMMPK R
Sbjct: 881 YLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIRAHITDAKMIEETRTQWTIVLPQNEINSGKFSDLFADIDRSLSGLNIVSYGLSDTSLEEVFLKVADDPAGTVEEIKDKQITAEDLDSLTDDGNFPRPSSRLSFRCKREFPRFDDLNSIPYESGAPSSLLTGSALLRQQLLGLQVKRFHYTKRNIKGFVAELVLPILLIVVMIAFSKISSNLNYQPPMEISPWLMMPKAR 1140
BLAST of ATP-binding cassette sub-family A member vs. Planmine SMEST
Match: SMESG000032891.1 (SMESG000032891.1) HSP 1 Score: 303.138 bits (775), Expect = 4.590e-94 Identity = 165/260 (63.46%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 1 YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIVLPQSENNCSKFPDLFDDLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIEEIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFISEXXXXXXXXXXXXXXXXXSSPLSDAPPMVISPWLMMPKTR 780
YLSDRIAIISQGKLQCCGSSVFLKKEFG+GYYLI+VK Q EDF++ +S SG L FI+ H+ DAKM+EETR+QWTIVL Q+E N KF DLF D+DR++ L IV+YGLSDTSLEEVFLKVADDP+G V IK+K++T E LD+LTD GNFPRP+S LS RDK EF + +++ + ++S S+LTG +L QQ++GLQ+KRFHYT+RN+K F++ELVLP+L+I+++I ISS L+ PPM ISPWLMMPK R
Sbjct: 871 YLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIRAHITDAKMIEETRTQWTIVLSQNEINNGKFSDLFADIDRSLSGLNIVSYGLSDTSLEEVFLKVADDPAGTVEEIKDKQITTEDLDSLTDDGNFPRPSSRLSFRDKREFPRFDDLNSIPYESGAPSSLLTGSALLCQQLLGLQVKRFHYTKRNIKGFVAELVLPILLIVIMIAFSKISSNLNYQPPMEISPWLMMPKAR 1130 The following BLAST results are available for this feature:
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012877 ID=SMED30012877|Name=ATP-binding cassette sub-family A member|organism=Schmidtea mediterranea sexual|type=transcript|length=780bpback to top protein sequence of SMED30012877-orf-1 >SMED30012877-orf-1 ID=SMED30012877-orf-1|Name=SMED30012877-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=260bp YLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|
