Y-box-binding protein 1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012869 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 24Note: Hover over icons to view figure legend
Homology
BLAST of Y-box-binding protein 1 vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 111.694 bits (278), Expect = 6.519e-27 Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 2
Query: 623 SELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
SE +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 79 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172 HSP 2 Score: 104.375 bits (259), Expect = 2.755e-24 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 83 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
BLAST of Y-box-binding protein 1 vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 111.694 bits (278), Expect = 2.185e-26 Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 2
Query: 623 SELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
SE +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 79 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172 HSP 2 Score: 105.145 bits (261), Expect = 4.885e-24 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 83 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
BLAST of Y-box-binding protein 1 vs. Ensembl Human
Match: YBX1 (Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]) HSP 1 Score: 109.383 bits (272), Expect = 7.522e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 52 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140 HSP 2 Score: 101.293 bits (251), Expect = 4.717e-23 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 2
Query: 158 SSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+ +K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 48 AGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
BLAST of Y-box-binding protein 1 vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 105.145 bits (261), Expect = 4.510e-24 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 2
Query: 143 ANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
A S +KPVL + G VKWFNV+ YGF+NR D ED+F+HQ+AI ++NP +SV DGE + FDVV+G KG E NV G G VKGS YA
Sbjct: 78 APPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYA 174 HSP 2 Score: 104.375 bits (259), Expect = 7.480e-24 Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
K V+ VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI ++NP +SV DGE + FD+V+G+ G EA NV+ P G VKGS YA
Sbjct: 87 KPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYA 174
BLAST of Y-box-binding protein 1 vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 105.145 bits (261), Expect = 4.510e-24 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 2
Query: 143 ANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
A S +KPVL + G VKWFNV+ YGF+NR D ED+F+HQ+AI ++NP +SV DGE + FDVV+G KG E NV G G VKGS YA
Sbjct: 78 APPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYA 174 HSP 2 Score: 104.375 bits (259), Expect = 7.480e-24 Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
K V+ VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI ++NP +SV DGE + FD+V+G+ G EA NV+ P G VKGS YA
Sbjct: 87 KPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYA 174
BLAST of Y-box-binding protein 1 vs. Ensembl Celegans
Match: cey-1 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:O62213]) HSP 1 Score: 115.161 bits (287), Expect = 2.204e-29 Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = 2
Query: 152 TESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
E +KPV ++G VKWFNVK YGF+NR D NEDIF+HQ+AI+ +NPN +S+ D EE++FD+V+G KGLE A+V G DG V+GS+YA
Sbjct: 8 AEQPADKPVKATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYA 101 HSP 2 Score: 104.375 bits (259), Expect = 1.494e-25 Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
K V + V G VKWFNVK GYGF+ R D EDIF+H +AI+ +NP +S+ D EE++FDIV+G G EAA+V+ PDG V+GS+YA
Sbjct: 14 KPVKATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYA 101
BLAST of Y-box-binding protein 1 vs. Ensembl Celegans
Match: cey-2 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91306]) HSP 1 Score: 95.9005 bits (237), Expect = 5.611e-22 Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 2
Query: 620 ESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEH-PRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEY 898
E E K I + + GKVKW++V R YGF+ R+D ++DIF+H +AI KS E +++ D EE+LFD+V+GK+G EAANV+ P+G+ V GS Y
Sbjct: 53 EEEQKSKTAITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRY 146 HSP 2 Score: 90.8929 bits (224), Expect = 2.933e-20 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 2
Query: 155 ESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKS-NPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEY 430
E K + G+QGKVKW++V RYGF++R D +DIF+HQ+AI KS +++ D EE+LFD+V+G G E ANV G +G+ V GS Y
Sbjct: 54 EEQKSKTAITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRY 146
BLAST of Y-box-binding protein 1 vs. Ensembl Celegans
Match: cey-3 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91398]) HSP 1 Score: 92.8189 bits (229), Expect = 6.048e-21 Identity = 47/119 (39.50%), Postives = 77/119 (64.71%), Query Frame = 2
Query: 545 RNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEH-PRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEY 898
+++ ++ R+P+ R + E ++ K V+ + + GKVKW++V R YGF+ R D ++D+F+H +AI KS+ E +++ D EE+LFD+V GK+G EAANV+ P G V GS+Y
Sbjct: 33 KDDTSKHRLPAAERIRIWEEEQK-------AKIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144 HSP 2 Score: 89.7373 bits (221), Expect = 5.745e-20 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2
Query: 155 ESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNH-PRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEY 430
E K VL G+QGKVKW++V RYGF++R D +D+F+HQ+AI KS+ +++ D EE+LFD+V G G E ANV G G V GS+Y
Sbjct: 52 EEQKAKIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144
BLAST of Y-box-binding protein 1 vs. Ensembl Celegans
Match: cey-3 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91398]) HSP 1 Score: 92.8189 bits (229), Expect = 6.048e-21 Identity = 47/119 (39.50%), Postives = 77/119 (64.71%), Query Frame = 2
Query: 545 RNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEH-PRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEY 898
+++ ++ R+P+ R + E ++ K V+ + + GKVKW++V R YGF+ R D ++D+F+H +AI KS+ E +++ D EE+LFD+V GK+G EAANV+ P G V GS+Y
Sbjct: 33 KDDTSKHRLPAAERIRIWEEEQK-------AKIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144 HSP 2 Score: 89.7373 bits (221), Expect = 5.745e-20 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2
Query: 155 ESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNH-PRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEY 430
E K VL G+QGKVKW++V RYGF++R D +D+F+HQ+AI KS+ +++ D EE+LFD+V G G E ANV G G V GS+Y
Sbjct: 52 EEQKAKIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144
BLAST of Y-box-binding protein 1 vs. Ensembl Celegans
Match: cey-4 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:G5EDV3]) HSP 1 Score: 92.0485 bits (227), Expect = 1.831e-20 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 2
Query: 170 KPVLCEGIQGKVKWFNVKLRYGFVNR---YDNNEDIFIHQSAIVKSNP-NHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
K V+ G++G VKWF+V+ RYGFV R D NED F+HQ+AI KS+ ++++D E ++FD+V+G+KG E ANV G DG V+GS +A
Sbjct: 82 KKVIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSRFA 173 HSP 2 Score: 88.1965 bits (217), Expect = 3.065e-19 Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 2
Query: 620 ESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRH---DNQEDIFIHHSAIVKSNP-EHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
E +L K+VI + V G VKWF+V+ YGFV R D ED F+H +AI KS+ + ++++D E ++FDIV+G G EAANV+ PDG V+GS +A
Sbjct: 76 EEDLASKKVIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSRFA 173
BLAST of Y-box-binding protein 1 vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0076027) HSP 1 Score: 108.612 bits (270), Expect = 9.430e-26 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
KEVI + V G VKWFNVK GYGF+ R+D +ED+F+H SAI ++NP+ +SV DGE + FD+V G+ G EAANV+ P G V+GS++A
Sbjct: 55 KEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143 HSP 2 Score: 100.523 bits (249), Expect = 5.878e-23 Identity = 54/111 (48.65%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 104 EMADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
E D GQ A T K V+ + G VKWFNVK YGF+NR D ED+F+HQSAI ++NP +SV DGE + FDVV G KG E ANV G G V+GS++A
Sbjct: 38 EPLDELQGQQGQPAPPT-----KEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143
BLAST of Y-box-binding protein 1 vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0305992) HSP 1 Score: 108.227 bits (269), Expect = 1.074e-25 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
KEVI + V G VKWFNVK GYGF+ R+D +ED+F+H SAI ++NP+ +SV DGE + FD+V G+ G EAANV+ P G V+GS++A
Sbjct: 55 KEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143 HSP 2 Score: 100.138 bits (248), Expect = 6.300e-23 Identity = 54/111 (48.65%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 104 EMADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
E D GQ A T K V+ + G VKWFNVK YGF+NR D ED+F+HQSAI ++NP +SV DGE + FDVV G KG E ANV G G V+GS++A
Sbjct: 38 EPLDELQGQQGQPAPPT-----KEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143
BLAST of Y-box-binding protein 1 vs. Ensembl Fly
Match: lin-28 (gene:FBgn0035626 transcript:FBtr0077090) HSP 1 Score: 59.3066 bits (142), Expect = 6.932e-10 Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 2
Query: 662 LGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEY 898
LGK KWFNV +G+GF+ +D +++F+H S I S +S+ + EE+ F+ + G EA VS+ G +GS Y
Sbjct: 40 LGKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSG----FRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTY 114 HSP 2 Score: 53.5286 bits (127), Expect = 5.991e-8 Identity = 28/78 (35.90%), Postives = 42/78 (53.85%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEY 430
GK KWFNV +GF+ D +++F+HQS I S +S+ + EE+ F+ + +GLE V G +GS Y
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSG----FRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTY 114
BLAST of Y-box-binding protein 1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 108.997 bits (271), Expect = 4.710e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 32 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 120 HSP 2 Score: 101.293 bits (251), Expect = 2.437e-23 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 31 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 120
BLAST of Y-box-binding protein 1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 108.997 bits (271), Expect = 4.710e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 32 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 120 HSP 2 Score: 101.293 bits (251), Expect = 2.437e-23 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 31 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 120
BLAST of Y-box-binding protein 1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 108.997 bits (271), Expect = 4.904e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 32 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 120 HSP 2 Score: 101.293 bits (251), Expect = 2.613e-23 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 31 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 120
BLAST of Y-box-binding protein 1 vs. Ensembl Zebrafish
Match: lin28a (lin-28 homolog A (C. elegans) [Source:NCBI gene;Acc:394066]) HSP 1 Score: 48.9062 bits (115), Expect = 3.648e-6 Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFVNR-------YDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF++ D+ D+F+HQS + +S+++GE + F + KGLE V G G GSE
Sbjct: 36 GVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEG----FRSLKEGEAVEFTFKRSSKGLESLQVTGPGGAPCVGSE 115
BLAST of Y-box-binding protein 1 vs. Ensembl Zebrafish
Match: lin28a (lin-28 homolog A (C. elegans) [Source:NCBI gene;Acc:394066]) HSP 1 Score: 48.1358 bits (113), Expect = 4.943e-6 Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFVNR-------YDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF++ D+ D+F+HQS + +S+++GE + F + KGLE V G G GSE
Sbjct: 28 GVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEG----FRSLKEGEAVEFTFKRSSKGLESLQVTGPGGAPCVGSE 107
BLAST of Y-box-binding protein 1 vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 109.768 bits (273), Expect = 3.210e-26 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 2
Query: 635 QKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
+K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 29 EKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 118 HSP 2 Score: 102.834 bits (255), Expect = 8.490e-24 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 29 EKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 118
BLAST of Y-box-binding protein 1 vs. Ensembl Xenopus
Match: ybx3 (Y-box binding protein 3 [Source:NCBI gene;Acc:548572]) HSP 1 Score: 103.605 bits (257), Expect = 1.756e-24 Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
++V+ + V G VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V G+ G EAANV+ P G V+GS YA
Sbjct: 29 RKVLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANVTGPKGAPVQGSRYAA 117 HSP 2 Score: 103.219 bits (256), Expect = 2.402e-24 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 2
Query: 176 VLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
VL +QG VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV G KG E ANV G G V+GS YA
Sbjct: 31 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANVTGPKGAPVQGSRYAA 117
BLAST of Y-box-binding protein 1 vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 104.375 bits (259), Expect = 2.912e-24 Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 2
Query: 644 VIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 40 CVTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 126 HSP 2 Score: 96.6709 bits (239), Expect = 1.598e-21 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 2
Query: 191 IQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+ G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 45 VLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 126
BLAST of Y-box-binding protein 1 vs. Ensembl Xenopus
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:100216028]) HSP 1 Score: 49.6766 bits (117), Expect = 3.894e-6 Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFVNR-------YDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF++ +N D+F+HQS + +S+++GE + F + KG E V G GN G+E
Sbjct: 35 GHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEG----FRSLKEGEPVEFTFKKSSKGFESLRVTGPGGNPCLGNE 114
BLAST of Y-box-binding protein 1 vs. Ensembl Xenopus
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:100216028]) HSP 1 Score: 49.6766 bits (117), Expect = 4.635e-6 Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFVNR-------YDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF++ +N D+F+HQS + +S+++GE + F + KG E V G GN G+E
Sbjct: 59 GHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEG----FRSLKEGEPVEFTFKKSSKGFESLRVTGPGGNPCLGNE 138
BLAST of Y-box-binding protein 1 vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 112.079 bits (279), Expect = 3.367e-27 Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 2
Query: 626 ELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
E +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 72 EDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164 HSP 2 Score: 105.916 bits (263), Expect = 4.041e-25 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 75 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164
BLAST of Y-box-binding protein 1 vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 111.309 bits (277), Expect = 1.699e-26 Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 2
Query: 626 ELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
E +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 72 EDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164 HSP 2 Score: 106.301 bits (264), Expect = 1.130e-24 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 75 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164
BLAST of Y-box-binding protein 1 vs. Ensembl Mouse
Match: Ybx1 (Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]) HSP 1 Score: 109.383 bits (272), Expect = 5.496e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 50 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 138 HSP 2 Score: 101.293 bits (251), Expect = 3.554e-23 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 2
Query: 158 SSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+ +K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 46 AGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 138
BLAST of Y-box-binding protein 1 vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 106.686 bits (265), Expect = 7.338e-25 Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 2
Query: 143 ANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
A S +KPVL + G VKWFNV+ YGF+NR D ED+F+HQ+AI ++NP +SV DGE + FDVV+G KG E ANV G G VKGS YA
Sbjct: 79 APPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 175 HSP 2 Score: 106.301 bits (264), Expect = 9.238e-25 Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
K V+ VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI ++NP +SV DGE + FD+V+G+ G EAANV+ P G VKGS YA
Sbjct: 88 KPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 175
BLAST of Y-box-binding protein 1 vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 103.605 bits (257), Expect = 2.273e-24 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 2
Query: 617 RESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
R + + + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI ++NP +SV DGE + FD+V+G+ G EAANV+ P G VKGS YA
Sbjct: 4 RAGQAGSAKALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 98 HSP 2 Score: 98.5969 bits (244), Expect = 1.423e-22 Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = 2
Query: 176 VLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
L + G VKWFNV+ YGF+NR D ED+F+HQ+AI ++NP +SV DGE + FDVV+G KG E ANV G G VKGS YA
Sbjct: 13 ALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 98
BLAST of Y-box-binding protein 1 vs. UniProt/SwissProt
Match: sp|P41824|YBOXH_APLCA (Y-box factor homolog OS=Aplysia californica OX=6500 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.119e-27 Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 2
Query: 602 ENKENRESELIQKE--VIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
EN+ ++E QKE +I S V G VKWFNVK GYGF+ R D +ED+F+H +AIVK+NP +SV DGE++ FD+V+G+ G EAANV+ P+G+ V+GS+YA
Sbjct: 12 ENQPDQEQNEEQKEKKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYA 113 HSP 2 Score: 113.235 bits (282), Expect = 3.846e-27 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 2
Query: 128 QNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
+N+ D + E EK ++ + G VKWFNVK YGF+NR D ED+F+HQ+AIVK+NP +SV DGE++ FDVV+G KG E ANV G +G+ V+GS+YA
Sbjct: 12 ENQPDQEQNEEQKEKKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYA 113
BLAST of Y-box-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q62764|YBOX3_RAT (Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.827e-26 Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 2
Query: 623 SELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
SE +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 71 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164 HSP 2 Score: 105.916 bits (263), Expect = 8.614e-24 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 75 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164
BLAST of Y-box-binding protein 1 vs. UniProt/SwissProt
Match: sp|P16989|YBOX3_HUMAN (Y-box-binding protein 3 OS=Homo sapiens OX=9606 GN=YBX3 PE=1 SV=4) HSP 1 Score: 111.694 bits (278), Expect = 1.049e-25 Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 2
Query: 623 SELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
SE +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 79 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172 HSP 2 Score: 105.145 bits (261), Expect = 2.346e-23 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 83 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
BLAST of Y-box-binding protein 1 vs. UniProt/SwissProt
Match: sp|P21573|YBOX1_XENLA (Y-box-binding protein 1 OS=Xenopus laevis OX=8355 GN=ybx1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.097e-25 Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P+G V+GS+YA
Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPEGVPVQGSKYAA 118 HSP 2 Score: 102.834 bits (255), Expect = 5.229e-23 Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G +G V+GS+YA
Sbjct: 29 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPEGVPVQGSKYAA 118
BLAST of Y-box-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q9JKB3|YBOX3_MOUSE (Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.188e-25 Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 2
Query: 626 ELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
E +K+V+ + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ PDG V+GS YA
Sbjct: 72 EDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164 HSP 2 Score: 106.301 bits (264), Expect = 7.902e-24 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
EK VL + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G DG V+GS YA
Sbjct: 75 EKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 164
BLAST of Y-box-binding protein 1 vs. TrEMBL
Match: A0A0H5RZM6 (Bm4155 OS=Brugia malayi OX=6279 GN=Bm4155 PE=4 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.058e-39 Identity = 99/248 (39.92%), Postives = 147/248 (59.27%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNN-EDIFIHQSAIVKSNP-NHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPXXXXXXXXXXXXXTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQ-EDIFIHHSAIVKSNP-EHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEY 898
+KP+L +G++GKVKW++V+ YGF+ R DN D+F+HQ+AI KS + +++ DGEE+LFD+VQG +G E ANV G + V+GS+Y F R SE R + +G + N+ E + +K NT E ++ V GKVKW++V+ YGF+ R DN+ D+F+H +AI KS ++ +++ DGEE+LFDIVQGK G EAANV+ P+ V+GS+Y
Sbjct: 66 KKPILEKGVKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQGKQGPEAANVTGPNSTEVRGSKYH-NFQFYTFRRRMAYNRERVAHKESEKYRRNN---QGRKPNEKLETDNADIKKPNT---------EHRRRFRHFRGVKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQGKQGPEAANVTGPNSTEVRGSKY 300 HSP 2 Score: 93.5893 bits (231), Expect = 1.270e-16 Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = 2
Query: 620 ESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQ-EDIFIHHSAIVKSNP-EHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEY 898
E E +K ++ V GKVKW++V+ YGF+ R DN+ D+F+H +AI KS ++ +++ DGEE+LFDIVQGK G EAANV+ P+ V+GS+Y
Sbjct: 61 EMEQAKKPILEKGVKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQGKQGPEAANVTGPNSTEVRGSKY 155
BLAST of Y-box-binding protein 1 vs. TrEMBL
Match: Q23960 (Y-box protein OS=Dugesia japonica OX=6161 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.432e-38 Identity = 75/110 (68.18%), Postives = 86/110 (78.18%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
MA++Q +E + N +SS +K +L GI GKVKWFNVK YGFV R DN EDIFIHQSAIVKSNP+HPRKSV +GEEILFD+V+G KG E ANV IDG CVKGSEYAL
Sbjct: 1 MANNQEKTDEYEGNAADSSKQKQLLHTGITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGNEAANVSAIDGKCVKGSEYAL 110 HSP 2 Score: 149.058 bits (375), Expect = 1.260e-37 Identity = 73/106 (68.87%), Postives = 85/106 (80.19%), Query Frame = 2
Query: 587 KKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
++ T E + N QK+++ + + GKVKWFNVKRGYGFVCR+DNQEDIFIH SAIVKSNP+HPRKSV +GEEILFDIV+G G EAANVSA DG VKGSEYAL
Sbjct: 5 QEKTDEYEGNAADSSKQKQLLHTGITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGNEAANVSAIDGKCVKGSEYAL 110
BLAST of Y-box-binding protein 1 vs. TrEMBL
Match: A0A3M7SJ45 (Nuclease-sensitive element-binding 1 isoform X4 OS=Brachionus plicatilis OX=10195 GN=BpHYR1_042057 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.146e-38 Identity = 92/244 (37.70%), Postives = 132/244 (54.10%), Query Frame = 2
Query: 176 VLCEG-IQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKG-LEVANVCGIDGNCVKGSEYALRFPXXXXXXXXXXXXXTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
++ EG + GKVKWFNVK++YGF++ NNED+F+H SAI+K+NPN + S+ +GE + FD+++ G LE NV G DG YV G R S +K NR SE K+ + V GKVKWFNVK G+GF+ R DN +D++ H++AI NP+H +S+ DGE + F+IV+G G EA++++ +G V+GSEYA
Sbjct: 121 IINEGRVTGKVKWFNVKIKYGFIHCDYNNEDVFVHSSAIIKNNPNKYKASLSEGEPVEFDILKRADGKLEAVNVSGPDG----------------------------------------AYVVGSR----------------YSPDKINR-SEQSDKKYVEENVAGKVKWFNVKAGFGFISRSDNDQDVYAHYTAIANKNPDHRVRSLADGEAVQFNIVEGSKGAEASDITGVNGEAVQGSEYA 307 HSP 2 Score: 100.908 bits (250), Expect = 7.242e-19 Identity = 44/96 (45.83%), Postives = 71/96 (73.96%), Query Frame = 2
Query: 146 NKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
N++E S++K + E + GKVKWFNVK +GF++R DN++D++ H +AI NP+H +S+ DGE + F++V+G KG E +++ G++G V+GSEYA
Sbjct: 213 NRSEQSDKK-YVEENVAGKVKWFNVKAGFGFISRSDNDQDVYAHYTAIANKNPDHRVRSLADGEAVQFNIVEGSKGAEASDITGVNGEAVQGSEYA 307 HSP 3 Score: 73.559 bits (179), Expect = 5.088e-10 Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 2
Query: 659 VLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
V G KW+N K G+GFV R D+ DIF+H S I ++ P S++DGE + FD++Q + A NV+ P+G ++GS+YA
Sbjct: 478 VHGVAKWYNYKNGFGFVTRTDSNLDIFVHKSGIQATDKAVP--SLDDGESVEFDVIQDGNKLLAINVTGPNGIVLRGSKYA 556 HSP 4 Score: 70.4774 bits (171), Expect = 4.776e-9 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 2
Query: 191 IQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
+ G KW+N K +GFV R D+N DIF+H+S I ++ P S++DGE + FDV+Q L NV G +G ++GS+YA
Sbjct: 478 VHGVAKWYNYKNGFGFVTRTDSNLDIFVHKSGIQATDKAVP--SLDDGESVEFDVIQDGNKLLAINVTGPNGIVLRGSKYA 556 HSP 5 Score: 69.3218 bits (168), Expect = 9.139e-9 Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 2
Query: 635 QKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAI----VKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFV 883
QKE I + + G VKWFN +G+GF+ R D +ED+F HHS+I + R + + E + FD+V+ +G EA N++ DG V
Sbjct: 18 QKEPIATNIKGAVKWFNRLKGFGFITRDDTKEDVFAHHSSIKPFSINLRRLKRRLFLIEQERVEFDVVKAPNGLEAVNIAGKDGYLV 104
BLAST of Y-box-binding protein 1 vs. TrEMBL
Match: A0A0K0FCY1 (Ypsilon schachtel (inferred by orthology to a D. melanogaster protein) OS=Strongyloides venezuelensis OX=75913 PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 9.623e-35 Identity = 96/263 (36.50%), Postives = 139/263 (52.85%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSN--EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPXXXXXXXXXXXXXTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKG 889
+++ QN + +++ N SSN EK VL G+ G VKW+NVKL YGF+ R+D ++ +F++ +I K NPN +S+ EE++FDVV+G+KGLE NV G +G VKGS R+ R +N R F RK N EN+E + QK + V GKV +FN +GYGF+ R+D E++F H +VK NP+ + G +LFDIV+G G EAA V+ +G + G
Sbjct: 44 ISNKQNKEAKDNGNTISSSNKEEKKVLETGVTGTVKWYNVKLGYGFIRRHDTSDCVFVYHQSIAKKNPNKRLRSLGTDEEVVFDVVEGMKGLEAGNVTGPNGEPVKGSHIDKRYK---------------------------------RKYRNGRRFQRFYRKFNM----ENKERDPNQK-YVEEKVQGKVLFFNSFKGYGFIKRNDKDENVFCHVVDVVKKNPKK-FYYLPTGTPVLFDIVEGLKGPEAAFVTDGEGKPLPG 267 HSP 2 Score: 93.2041 bits (230), Expect = 7.363e-17 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query: 596 TSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGS 892
+S NKE +K+V+ + V G VKW+NVK GYGF+ RHD + +F++H +I K NP +S+ EE++FD+V+G G EA NV+ P+G VKGS
Sbjct: 60 SSSNKE-------EKKVLETGVTGTVKWYNVKLGYGFIRRHDTSDCVFVYHQSIAKKNPNKRLRSLGTDEEVVFDVVEGMKGLEAGNVTGPNGEPVKGS 151
BLAST of Y-box-binding protein 1 vs. TrEMBL
Match: A0A0N5B1V5 (Uncharacterized protein OS=Strongyloides papillosus OX=174720 PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.054e-34 Identity = 96/262 (36.64%), Postives = 137/262 (52.29%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNE-KPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPXXXXXXXXXXXXXTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKG 889
+++ QN + +++ N S+ E K VL G+ G VKW+NVKL YGF+ R D N+ +F++ +I K NPN +S+ EE++FDV++G KGLE NV G +G VKGS R+ +N +N R F RK N EN+E + QK + V GKV +FN +GYGF+ R+D E++F H IVK NP+ + G +LFDIV+G G EAA V +GN + G
Sbjct: 45 VSNEQNEETKDNGNSGSSNKEEKKVLESGVAGTVKWYNVKLGYGFIRRNDTNDCVFVYHQSIAKKNPNKRLRSLATDEEVVFDVIEGKKGLEAGNVTGPNGEPVKGSHIDKRYK---------------------------------KNYRNGRRFQRFYRKFNM----ENKERDPNQK-YVEEKVEGKVLFFNSFKGYGFIKRNDKDENVFCHVVDIVKKNPKRFY-YLPTGTPVLFDIVEGLKGTEAAFVRDEEGNPLSG 267 HSP 2 Score: 94.7449 bits (234), Expect = 2.537e-17 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 2
Query: 596 TSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGS 892
T +N + S +K+V+ S V G VKW+NVK GYGF+ R+D + +F++H +I K NP +S+ EE++FD+++GK G EA NV+ P+G VKGS
Sbjct: 53 TKDNGNSGSSNKEEKKVLESGVAGTVKWYNVKLGYGFIRRNDTNDCVFVYHQSIAKKNPNKRLRSLATDEEVVFDVIEGKKGLEAGNVTGPNGEPVKGS 151
BLAST of Y-box-binding protein 1 vs. Ensembl Cavefish
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:103040011]) HSP 1 Score: 108.612 bits (270), Expect = 5.282e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 33 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 121 HSP 2 Score: 100.908 bits (250), Expect = 2.588e-23 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 32 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 121
BLAST of Y-box-binding protein 1 vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 103.219 bits (256), Expect = 3.954e-24 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 2
Query: 611 ENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
E +E +++VI + V G VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+ G EAANV+ P G VKGS YA
Sbjct: 15 ETQEDLPPERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSRYA 111 HSP 2 Score: 101.679 bits (252), Expect = 1.495e-23 Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
E+ V+ +QG VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+ KG E ANV G G VKGS YA
Sbjct: 23 ERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSRYA 111
BLAST of Y-box-binding protein 1 vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 100.523 bits (249), Expect = 3.505e-23 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 2
Query: 629 LIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
L ++ + V G VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+ G EAANV+ P G VKGS YA
Sbjct: 14 LTSVSIVATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSRYA 104 HSP 2 Score: 98.9821 bits (245), Expect = 1.409e-22 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 2
Query: 176 VLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
++ +QG VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+ KG E ANV G G VKGS YA
Sbjct: 19 IVATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSRYA 104
BLAST of Y-box-binding protein 1 vs. Ensembl Cavefish
Match: LIN28B (protein lin-28 homolog A [Source:NCBI gene;Acc:103022253]) HSP 1 Score: 51.2174 bits (121), Expect = 6.779e-7 Identity = 29/84 (34.52%), Postives = 42/84 (50.00%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFV-------NRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF+ N D D+F+HQS + +S+++GE + F + KGLE V G G GSE
Sbjct: 31 GHCKWFNVRMGFGFISMTSRGGNPIDPPLDVFVHQSKLHMEG----FRSLKEGEAVEFTFKKSSKGLECVRVTGPGGAHCVGSE 110
BLAST of Y-box-binding protein 1 vs. Ensembl Cavefish
Match: LIN28B (protein lin-28 homolog A [Source:NCBI gene;Acc:103022253]) HSP 1 Score: 50.8322 bits (120), Expect = 8.610e-7 Identity = 29/84 (34.52%), Postives = 42/84 (50.00%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFV-------NRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF+ N D D+F+HQS + +S+++GE + F + KGLE V G G GSE
Sbjct: 39 GHCKWFNVRMGFGFISMTSRGGNPIDPPLDVFVHQSKLHMEG----FRSLKEGEAVEFTFKKSSKGLECVRVTGPGGAHCVGSE 118
BLAST of Y-box-binding protein 1 vs. Ensembl Nematostella
Match: EDO41469 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S475]) HSP 1 Score: 103.605 bits (257), Expect = 6.883e-27 Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 2
Query: 644 VIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
+ + V G VKWFNVK GYGF+ R DN+EDIF+H +AI K+NP+ +SV DGE + F++V G G EA+NV+ PDG V+GS+YA
Sbjct: 3 IAATKVTGTVKWFNVKNGYGFINRDDNKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNVVSGTKGLEASNVTGPDGEPVQGSKYA 88 HSP 2 Score: 102.449 bits (254), Expect = 2.108e-26 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 2
Query: 176 VLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
+ + G VKWFNVK YGF+NR DN EDIF+HQ+AI K+NP +SV DGE + F+VV G KGLE +NV G DG V+GS+YA
Sbjct: 3 IAATKVTGTVKWFNVKNGYGFINRDDNKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNVVSGTKGLEASNVTGPDGEPVQGSKYA 88
BLAST of Y-box-binding protein 1 vs. Ensembl Nematostella
Match: EDO44703 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV03]) HSP 1 Score: 67.3958 bits (163), Expect = 6.973e-12 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 2
Query: 599 SENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGS 892
SE +E+ K+ I T G VKWFN+ +G+GF+ R D ED+F+H SAI S +S+E+GE + I G+ A V++P G VKG+
Sbjct: 465 SEEAREVTTEVGGKDTITCT--GSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKASG----YRSLEEGEHVQLTISNSDKGKVAICVTSPGGGNVKGA 556 HSP 2 Score: 53.9138 bits (128), Expect = 1.018e-7 Identity = 33/91 (36.26%), Postives = 46/91 (50.55%), Query Frame = 2
Query: 152 TESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGS 424
TE + + C G VKWFN+ +GF+ R D ED+F+HQSAI S +S+E+GE + + KG V G VKG+
Sbjct: 473 TEVGGKDTITC---TGSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKASG----YRSLEEGEHVQLTISNSDKGKVAICVTSPGGGNVKGA 556
BLAST of Y-box-binding protein 1 vs. Ensembl Medaka
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:100049221]) HSP 1 Score: 109.383 bits (272), Expect = 2.945e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query: 638 KEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
K+VI + VLG VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+V+G+ G EAANV+ P G V+GS+YA
Sbjct: 34 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAA 122 HSP 2 Score: 101.679 bits (252), Expect = 1.437e-23 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 2
Query: 167 EKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYAL 436
+K V+ + G VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDVV+G KG E ANV G G V+GS+YA
Sbjct: 33 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAA 122
BLAST of Y-box-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000007880.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 103.219 bits (256), Expect = 1.549e-23 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 2
Query: 155 ESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
E +E+ V+ +QG VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDV++ KG E ANV G G VKGS YA
Sbjct: 100 EKQSERKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYA 192 HSP 2 Score: 102.834 bits (255), Expect = 2.573e-23 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 2
Query: 611 ENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
E ++SE ++VI + V G VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+++ G EAANV+ P G VKGS YA
Sbjct: 99 EEKQSE---RKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYA 192
BLAST of Y-box-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000007875.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 103.219 bits (256), Expect = 1.789e-23 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 2
Query: 155 ESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
E +E+ V+ +QG VKWFNV+ YGF+NR D ED+F+HQ+AI K+NP +SV DGE + FDV++ KG E ANV G G VKGS YA
Sbjct: 100 EKQSERKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYA 192 HSP 2 Score: 102.449 bits (254), Expect = 2.582e-23 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 2
Query: 611 ENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
E ++SE ++VI + V G VKWFNV+ GYGF+ R+D +ED+F+H +AI K+NP +SV DGE + FD+++ G EAANV+ P G VKGS YA
Sbjct: 99 EEKQSE---RKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYA 192
BLAST of Y-box-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000029434.1 (pep primary_assembly:ASM223467v1:3:36782961:36787024:1 gene:ENSORLG00000026367.1 transcript:ENSORLT00000029434.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.7582 bits (125), Expect = 2.740e-8 Identity = 24/62 (38.71%), Postives = 41/62 (66.13%), Query Frame = 2
Query: 152 TESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGE 337
T + +++ V+ G+Q VKWF+V YG +NR + ED+F+ Q+AI +NP + +S+ DG+
Sbjct: 24 TWNQSKRKVITTGVQDTVKWFHVCNGYGLINRNNTKEDVFVPQTAIKNNNPRNFLRSIGDGK 85 HSP 2 Score: 51.2174 bits (121), Expect = 9.396e-8 Identity = 22/57 (38.60%), Postives = 39/57 (68.42%), Query Frame = 2
Query: 635 QKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGE 805
+++VI + V VKWF+V GYG + R++ +ED+F+ +AI +NP + +S+ DG+
Sbjct: 29 KRKVITTGVQDTVKWFHVCNGYGLINRNNTKEDVFVPQTAIKNNNPRNFLRSIGDGK 85
BLAST of Y-box-binding protein 1 vs. Ensembl Medaka
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:101160951]) HSP 1 Score: 51.6026 bits (122), Expect = 5.117e-7 Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 2
Query: 197 GKVKWFNVKLRYGFVNRYDNNE--------DIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSE 427
G KWFNV++ +GF++ N+E D+F+HQS +V +S+++GE++ F + KGLE V G G GSE
Sbjct: 42 GFCKWFNVRMGFGFIS-MTNSEGSPVEPPLDVFVHQSKLVMEG----FRSLKEGEQVEFTYKKSSKGLESLRVTGPGGGPCVGSE 121 HSP 2 Score: 48.521 bits (114), Expect = 5.654e-6 Identity = 26/84 (30.95%), Postives = 44/84 (52.38%), Query Frame = 2
Query: 665 GKVKWFNVKRGYGFVCRHDNQE-------DIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSE 895
G KWFNV+ G+GF+ +++ D+F+H S +V +S+++GE++ F + G E+ V+ P G GSE
Sbjct: 42 GFCKWFNVRMGFGFISMTNSEGSPVEPPLDVFVHQSKLVMEG----FRSLKEGEQVEFTYKKSSKGLESLRVTGPGGGPCVGSE 121
BLAST of Y-box-binding protein 1 vs. Planmine SMEST
Match: SMESG000032189.1 (SMESG000032189.1) HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0 Identity = 435/437 (99.54%), Postives = 436/437 (99.77%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPXXXXXXXXXXXXXTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYALXXXXXXXXXXXXXXXXXXXXXDKGRTREVSENEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQYVVQYRGQYNXXXXXXXXXXXXXXXMRFPPGDGFNGRMFRGGPPREIPMKHEPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAEEVEQSQ 1417
MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPRIRGRGIGRGIGRTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESE IQKEVI+STVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYALRYMRGRGRGRGRGRGMRNERGDKGRTREVSENEEMRGGGGPFRGNMGGRPFRGIRPFRGGGRPFRARPFRGGSQYVVQYRGQYNYERPPDYFYDYYPEPMRFPPGDGFNGRMFRGGPPREIPMKHEPYDNEYYEPRRGRGRPRGRGRTRGRGGYGNNTNPNENAEEVEQSQ
Sbjct: 1 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPRIRGRGIGRGIGRTRTKSNSESGTRTHDYVRGGRNNQNRERIPSFTRKKNTSENKENRESESIQKEVIISTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYALRYMRGRGRGRGRGRGMRNERGDKGRTREVSENEEMRGGGGPFRGNMGGRPFRGIRPFRGGGRPFRARPFRGGSQYVVQYRGQYNYERPPDYFYDYYPEPMRFPPGDGFNGRMFRGGPPREIPMKHEPYDNEYYEPRRGRGRPRGRGRTRGRGGYGNNTNPNENAEEVEQSQ 437
BLAST of Y-box-binding protein 1 vs. Planmine SMEST
Match: SMESG000032180.1 (SMESG000032180.1) HSP 1 Score: 147.902 bits (372), Expect = 1.613e-41 Identity = 93/152 (61.18%), Postives = 110/152 (72.37%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYALRFPXXXXXXXXXXXXXTRTKSNSESG-TRTHDYVRGGRNNQN 559
MA++Q + N TE+S +K VL I GKVKWFNVK YGFV R DN EDIFIHQSAIVKSNP+HPRKSV +GEEI FD+V+G KG E ANV IDG+CVKGSEYALR+ R RGRG G GR R++ SE G R+ D++RGG +N
Sbjct: 1 MANNQEKIEGYEENATEASKQKQVLFTEITGKVKWFNVKRGYGFVCRDDNCEDIFIHQSAIVKSNPDHPRKSVGEGEEIKFDIVKGAKGNEAANVSAIDGSCVKGSEYALRYQRGRGRGRGVFRGRGRSRVVSEEGDMRSQDFLRGGLRGRN 152 HSP 2 Score: 144.821 bits (364), Expect = 2.811e-40 Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 2
Query: 608 KENRESELIQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYAL 904
+EN QK+V+ + + GKVKWFNVKRGYGFVCR DN EDIFIH SAIVKSNP+HPRKSV +GEEI FDIV+G G EAANVSA DG+ VKGSEYAL
Sbjct: 12 EENATEASKQKQVLFTEITGKVKWFNVKRGYGFVCRDDNCEDIFIHQSAIVKSNPDHPRKSVGEGEEIKFDIVKGAKGNEAANVSAIDGSCVKGSEYAL 110
BLAST of Y-box-binding protein 1 vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 121.709 bits (304), Expect = 2.455e-30 Identity = 63/109 (57.80%), Postives = 76/109 (69.72%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
MAD Q E + TE K +L I GKVKWFNVK YGF+NR DN EDIF+HQ+AI+K+NP ++SV DGEE+ FDVV+G KGLE ANV G DG V+GS+YA
Sbjct: 1 MADIQTSPAERSIHPTE----KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYA 105 HSP 2 Score: 117.472 bits (293), Expect = 7.342e-29 Identity = 52/90 (57.78%), Postives = 73/90 (81.11%), Query Frame = 2
Query: 632 IQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
+K+++ + + GKVKWFNVK GYGF+ R+DNQEDIF+H +AI+K+NP ++SV DGEE+ FD+V+G+ G EAANV+ PDG V+GS+YA
Sbjct: 16 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYA 105
BLAST of Y-box-binding protein 1 vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 121.709 bits (304), Expect = 3.469e-30 Identity = 63/109 (57.80%), Postives = 76/109 (69.72%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
MAD Q E + TE K +L I GKVKWFNVK YGF+NR DN EDIF+HQ+AI+K+NP ++SV DGEE+ FDVV+G KGLE ANV G DG V+GS+YA
Sbjct: 1 MADIQTSPAERSIHPTE----KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYA 105 HSP 2 Score: 117.857 bits (294), Expect = 6.572e-29 Identity = 52/90 (57.78%), Postives = 73/90 (81.11%), Query Frame = 2
Query: 632 IQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
+K+++ + + GKVKWFNVK GYGF+ R+DNQEDIF+H +AI+K+NP ++SV DGEE+ FD+V+G+ G EAANV+ PDG V+GS+YA
Sbjct: 16 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYA 105
BLAST of Y-box-binding protein 1 vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 121.324 bits (303), Expect = 3.776e-30 Identity = 63/109 (57.80%), Postives = 76/109 (69.72%), Query Frame = 2
Query: 107 MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNNEDIFIHQSAIVKSNPNHPRKSVEDGEEILFDVVQGIKGLEVANVCGIDGNCVKGSEYA 433
MAD Q E + TE K +L I GKVKWFNVK YGF+NR DN EDIF+HQ+AI+K+NP ++SV DGEE+ FDVV+G KGLE ANV G DG V+GS+YA
Sbjct: 1 MADIQTSPAERSIHPTE----KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYA 105 HSP 2 Score: 117.857 bits (294), Expect = 7.146e-29 Identity = 52/90 (57.78%), Postives = 73/90 (81.11%), Query Frame = 2
Query: 632 IQKEVIMSTVLGKVKWFNVKRGYGFVCRHDNQEDIFIHHSAIVKSNPEHPRKSVEDGEEILFDIVQGKHGQEAANVSAPDGNFVKGSEYA 901
+K+++ + + GKVKWFNVK GYGF+ R+DNQEDIF+H +AI+K+NP ++SV DGEE+ FD+V+G+ G EAANV+ PDG V+GS+YA
Sbjct: 16 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYA 105 The following BLAST results are available for this feature:
BLAST of Y-box-binding protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Y-box-binding protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Y-box-binding protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Y-box-binding protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Y-box-binding protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Y-box-binding protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Y-box-binding protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012869 ID=SMED30012869|Name=Y-box-binding protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1496bpback to top protein sequence of SMED30012869-orf-1 >SMED30012869-orf-1 ID=SMED30012869-orf-1|Name=SMED30012869-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=438bp MADHQNGQNENDANKTESSNEKPVLCEGIQGKVKWFNVKLRYGFVNRYDNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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