Transformer 2 protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012773 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Transformer 2 protein vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]) HSP 1 Score: 137.887 bits (346), Expect = 1.686e-37 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 1 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 113
BLAST of Transformer 2 protein vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 135.191 bits (339), Expect = 1.362e-36 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 1 MSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 113
BLAST of Transformer 2 protein vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 135.191 bits (339), Expect = 1.402e-36 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 1 MSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 113
BLAST of Transformer 2 protein vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 135.191 bits (339), Expect = 1.402e-36 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 1 MSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 113
BLAST of Transformer 2 protein vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]) HSP 1 Score: 138.272 bits (347), Expect = 2.294e-36 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77]) HSP 1 Score: 119.783 bits (299), Expect = 5.520e-30 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVY 506 DR+NP PSKCLG+FNLS TTEKDL ++F +GEI LV D+ + SRGFGF+YF I+DA A++K+ T + G +IRVD+S+T R H+PTPG Y Sbjct: 68 DRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQY 165
BLAST of Transformer 2 protein vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77]) HSP 1 Score: 119.783 bits (299), Expect = 5.520e-30 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVY 506 DR+NP PSKCLG+FNLS TTEKDL ++F +GEI LV D+ + SRGFGF+YF I+DA A++K+ T + G +IRVD+S+T R H+PTPG Y Sbjct: 68 DRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQY 165
BLAST of Transformer 2 protein vs. Ensembl Celegans
Match: rsp-4 (Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]) HSP 1 Score: 66.6254 bits (161), Expect = 3.450e-13 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 240 CLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRV 458 L I NLS +TT DL F RYG+I DV + DK +++S+GFGFV F DAE A ++ G +V G+++RV Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
BLAST of Transformer 2 protein vs. Ensembl Celegans
Match: rsp-4 (Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]) HSP 1 Score: 67.0106 bits (162), Expect = 1.249e-12 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 240 CLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRV 458 L I NLS +TT DL F RYG+I DV + DK +++S+GFGFV F DAE A ++ G +V G+++RV Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
BLAST of Transformer 2 protein vs. Ensembl Celegans
Match: fox-1 (Sex determination protein fox-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10572]) HSP 1 Score: 59.6918 bits (143), Expect = 2.054e-9 Identity = 33/105 (31.43%), Postives = 60/105 (57.14%), Query Frame = 3 Query: 204 DKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHT----PTPGVY 506 D P K L + N+ + DL MF ++G + DV ++ ++ + S+GFGFV + DAE A++++HG++++G++I V+ + T R H+ PT G+ Sbjct: 83 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA-TARVHSKKVKPTGGIL 184
BLAST of Transformer 2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089616) HSP 1 Score: 117.087 bits (292), Expect = 2.635e-30 Identity = 50/103 (48.54%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 210 EDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTK 518 + R++P S+C+G+F L+ T++ + E+F +YG IE + +VID T+RSRGF F+YF+ + DA AK+ G V G++IRVD+S+T RAHTPTPGVY G + Sbjct: 3 KSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQ 105
BLAST of Transformer 2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089615) HSP 1 Score: 117.857 bits (294), Expect = 5.914e-30 Identity = 51/109 (46.79%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 192 DKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTK 518 D++ + R++P S+C+G+F L+ T++ + E+F +YG IE + +VID T+RSRGF F+YF+ + DA AK+ G V G++IRVD+S+T RAHTPTPGVY G + Sbjct: 44 DRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQ 152
BLAST of Transformer 2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089619) HSP 1 Score: 117.857 bits (294), Expect = 5.914e-30 Identity = 51/109 (46.79%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 192 DKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTK 518 D++ + R++P S+C+G+F L+ T++ + E+F +YG IE + +VID T+RSRGF F+YF+ + DA AK+ G V G++IRVD+S+T RAHTPTPGVY G + Sbjct: 44 DRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQ 152
BLAST of Transformer 2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089620) HSP 1 Score: 117.857 bits (294), Expect = 1.439e-29 Identity = 51/109 (46.79%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 192 DKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTK 518 D++ + R++P S+C+G+F L+ T++ + E+F +YG IE + +VID T+RSRGF F+YF+ + DA AK+ G V G++IRVD+S+T RAHTPTPGVY G + Sbjct: 82 DRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQ 190
BLAST of Transformer 2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089621) HSP 1 Score: 117.857 bits (294), Expect = 1.439e-29 Identity = 51/109 (46.79%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 192 DKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTK 518 D++ + R++P S+C+G+F L+ T++ + E+F +YG IE + +VID T+RSRGF F+YF+ + DA AK+ G V G++IRVD+S+T RAHTPTPGVY G + Sbjct: 82 DRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQ 190
BLAST of Transformer 2 protein vs. Ensembl Zebrafish
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 135.191 bits (339), Expect = 1.245e-35 Identity = 61/116 (52.59%), Postives = 86/116 (74.14%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 MS+++ DR NP P+ CLG+F LSL TTE+DL E+F +YG + DV +V D+ ++RSRGF FVYF+N +D++ AKE+ +G + G++IRVDYS+T R HTPTPG+Y G T+ G Sbjct: 106 MSNRRRHIGDRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFAFVYFENREDSKEAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTYGGG 221
BLAST of Transformer 2 protein vs. Ensembl Zebrafish
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 135.191 bits (339), Expect = 1.245e-35 Identity = 61/116 (52.59%), Postives = 86/116 (74.14%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 MS+++ DR NP P+ CLG+F LSL TTE+DL E+F +YG + DV +V D+ ++RSRGF FVYF+N +D++ AKE+ +G + G++IRVDYS+T R HTPTPG+Y G T+ G Sbjct: 106 MSNRRRHIGDRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFAFVYFENREDSKEAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTYGGG 221
BLAST of Transformer 2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 133.65 bits (335), Expect = 8.577e-35 Identity = 60/104 (57.69%), Postives = 79/104 (75.96%), Query Frame = 3 Query: 216 RDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHD 527 R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF++IDDA+ A E+ +G + G++IRVDYS+T R HTPTPG+Y G TH+ Sbjct: 128 RANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHN 231
BLAST of Transformer 2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 133.265 bits (334), Expect = 9.607e-35 Identity = 60/104 (57.69%), Postives = 79/104 (75.96%), Query Frame = 3 Query: 216 RDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHD 527 R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF++IDDA+ A E+ +G + G++IRVDYS+T R HTPTPG+Y G TH+ Sbjct: 128 RANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHN 231
BLAST of Transformer 2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 129.413 bits (324), Expect = 2.237e-34 Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 216 RDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKT 521 R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF++IDDA+ A E+ +G + G++IRVDYS+T R HTPTPG+Y G T Sbjct: 99 RANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPT 200
BLAST of Transformer 2 protein vs. Ensembl Xenopus
Match: rit1 (Ras-like without CAAX 1 [Source:Xenbase;Acc:XB-GENE-5777077]) HSP 1 Score: 138.272 bits (347), Expect = 4.496e-36 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 136 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 248
BLAST of Transformer 2 protein vs. Ensembl Xenopus
Match: plekhg5 (pleckstrin homology and RhoGEF domain containing G5 [Source:Xenbase;Acc:XB-GENE-6039487]) HSP 1 Score: 131.339 bits (329), Expect = 6.300e-34 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ C+G+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ I+D+ A E +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 97 MSNRRRHNGSRANPDPNICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 209
BLAST of Transformer 2 protein vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 72.4034 bits (176), Expect = 3.035e-14 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 243 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVD 461 L + L+ ETTE+ L ++F +YG++ +V +V D+ +KRSRGFGFV F+N +DA+ A ++G V G+QIRVD Sbjct: 20 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92
BLAST of Transformer 2 protein vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 72.4034 bits (176), Expect = 3.086e-14 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 243 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVD 461 L + L+ ETTE+ L ++F +YG++ +V +V D+ +KRSRGFGFV F+N +DA+ A ++G V G+QIRVD Sbjct: 20 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92
BLAST of Transformer 2 protein vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 72.0182 bits (175), Expect = 4.102e-14 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 243 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVD 461 L + L+ ETTE+ L ++F +YG++ +V +V D+ +KRSRGFGFV F+N +DA+ A ++G V G+QIRVD Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 80
BLAST of Transformer 2 protein vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016]) HSP 1 Score: 137.887 bits (346), Expect = 1.158e-37 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 1 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 113
BLAST of Transformer 2 protein vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016]) HSP 1 Score: 138.272 bits (347), Expect = 1.575e-36 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]) HSP 1 Score: 135.576 bits (340), Expect = 1.052e-35 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 100 MSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 212
BLAST of Transformer 2 protein vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]) HSP 1 Score: 135.576 bits (340), Expect = 1.104e-35 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 100 MSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 212
BLAST of Transformer 2 protein vs. Ensembl Mouse
Match: Cirbp (cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]) HSP 1 Score: 75.485 bits (184), Expect = 3.338e-16 Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 3 Query: 243 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYS 467 L + LS +T E+ L ++F +YG+I +V +V D+ T+RSRGFGFV F+NIDDA+ A ++G V G+QIRVD + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of Transformer 2 protein vs. UniProt/SwissProt
Match: sp|P62997|TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.101e-35 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. UniProt/SwissProt
Match: sp|P62996|TRA2B_MOUSE (Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.101e-35 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. UniProt/SwissProt
Match: sp|P62995|TRA2B_HUMAN (Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.101e-35 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. UniProt/SwissProt
Match: sp|Q3ZBT6|TRA2B_BOVIN (Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.101e-35 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS ++ +R NP P+ CLG+F LSL TTE+DL E+F +YG I DVS+V D+ ++RSRGF FVYF+N+DDA+ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. UniProt/SwissProt
Match: sp|Q6PFR5|TRA2A_MOUSE (Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.539e-35 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T RAHTPTPG+Y G TH Sbjct: 100 MSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 212
BLAST of Transformer 2 protein vs. TrEMBL
Match: A0A0R3WII9 (RRM domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS418 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 7.068e-36 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 210 EDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 + RDNP+PS+C+G+F LSL TTE+DL+++F RYGE+EDV++V D T SRGFGFVY +++ DA+ AK HGT + G+ IRVDYSVT R H+PTPGVY G T G Sbjct: 80 QPRDNPVPSRCIGVFGLSLSTTERDLYDLFSRYGEVEDVTIVYDNFTCHSRGFGFVYMRHLSDAKEAKHDAHGTELDGRPIRVDYSVTERPHSPTPGVYMGRPTRRCG 187
BLAST of Transformer 2 protein vs. TrEMBL
Match: A0A1I8FUT4 (RRM domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.490e-35 Identity = 66/110 (60.00%), Postives = 81/110 (73.64%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGT 515 MS +K DRDNP SKCLG+F LSL TTE+DL +F RYG +EDV LV D T+RSRGF FVYF+++DDA AKE+ HG + G+ +R D+S+T RAHTPTPGVY G Sbjct: 58 MSSRKRHVGDRDNPKASKCLGVFGLSLRTTEEDLRHLFGRYGRLEDVQLVKDNHTRRSRGFAFVYFESLDDATYAKERCHGKELDGRNMRCDFSITRRAHTPTPGVYLGA 167
BLAST of Transformer 2 protein vs. TrEMBL
Match: A0A068Y440 (Transformer 2 protein OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000709100 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.494e-35 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 210 EDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 + RDNP+PS+C+G+F LSL TTE+DL+++F RYGE+EDV++V D T SRGFGFVY +++ DA+ AK HGT + G+ IRVDYSVT R H+PTPGVY G T G Sbjct: 92 QPRDNPVPSRCIGVFGLSLSTTERDLYDLFSRYGEVEDVTIVYDNFTGHSRGFGFVYMRHLSDAKEAKHDAHGTELDGRPIRVDYSVTERPHSPTPGVYMGRPTRRCG 199
BLAST of Transformer 2 protein vs. TrEMBL
Match: A0A068WSF6 (Transformer 2 protein OS=Echinococcus granulosus OX=6210 GN=EgrG_000709100 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.494e-35 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 210 EDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 + RDNP+PS+C+G+F LSL TTE+DL+++F RYGE+EDV++V D T SRGFGFVY +++ DA+ AK HGT + G+ IRVDYSVT R H+PTPGVY G T G Sbjct: 92 QPRDNPVPSRCIGVFGLSLSTTERDLYDLFSRYGEVEDVTIVYDNFTGHSRGFGFVYMRHLSDAKEAKHDAHGTELDGRPIRVDYSVTERPHSPTPGVYMGRPTRRCG 199
BLAST of Transformer 2 protein vs. TrEMBL
Match: A0A3P6QF40 (RRM domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS7685 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.225e-35 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 210 EDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 + RDNP+PS+C+G+F LSL TTE+DL+++F RYGE+EDV++V D T SRGFGFVY +++ DA+ AK HGT + G+ IRVDYSVT R H+PTPGVY G T G Sbjct: 112 QPRDNPVPSRCIGVFGLSLSTTERDLYDLFSRYGEVEDVTIVYDNFTCHSRGFGFVYMRHLSDAKEAKHDAHGTELDGRPIRVDYSVTERPHSPTPGVYMGRPTRRCG 219
BLAST of Transformer 2 protein vs. Ensembl Cavefish
Match: ENSAMXT00000034164.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:6544829:6548035:1 gene:ENSAMXG00000039469.1 transcript:ENSAMXT00000034164.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 134.035 bits (336), Expect = 2.119e-36 Identity = 60/116 (51.72%), Postives = 85/116 (73.28%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIG 533 MS+++ +R NP P+ CLG+F LSL TTE+DL E+F +YG + VS+V D+ ++RSRGF FVYF+N +D+ AKE+ +G + G++IRVDYS+T R HTPTPG+Y G T+ G Sbjct: 1 MSNRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSSVSIVYDQQSRRSRGFAFVYFENREDSREAKERANGMELDGRRIRVDYSITQRPHTPTPGIYMGRPTYGGG 116
BLAST of Transformer 2 protein vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 131.724 bits (330), Expect = 1.100e-34 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T R HTPTPG+Y G T Sbjct: 90 MSNRRRHAGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTQ 202
BLAST of Transformer 2 protein vs. Ensembl Cavefish
Match: tra2b (transformer-2 protein homolog alpha-like [Source:NCBI gene;Acc:103029311]) HSP 1 Score: 132.109 bits (331), Expect = 2.460e-34 Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ +R NP P+ CLG+F LSL TTE+DL E+F +YG + DV +V D+ ++RSRGF FVYF+N +D++ AKE+ +G + G++IRVD+S+T R HTPTPG+Y G T+ Sbjct: 101 MSNRRRHIGNRANPDPTCCLGVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENREDSQEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of Transformer 2 protein vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 127.872 bits (320), Expect = 1.628e-33 Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 3 Query: 216 RDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 R NP P+ CLG+F LSL TTE+DL E+F RYG + V++V D+ T RSRGF FVYF+ IDD++ A E+ +G + G++IRVDYS+T R HTPTPG+Y G T Sbjct: 128 RANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTQ 230
BLAST of Transformer 2 protein vs. Ensembl Cavefish
Match: cirbpa (cold inducible RNA binding protein a [Source:ZFIN;Acc:ZDB-GENE-050417-329]) HSP 1 Score: 69.707 bits (169), Expect = 9.416e-14 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 243 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVD 461 L I LS +TTE+ L E F +YG I +V + ++ T RSRGFGFV F+N DDA+ A E ++G V G+ IRVD Sbjct: 7 LFIGGLSFDTTEQSLEEAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSVDGRAIRVD 79
BLAST of Transformer 2 protein vs. Ensembl Sea Lamprey
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 131.339 bits (329), Expect = 7.036e-35 Identity = 58/109 (53.21%), Postives = 82/109 (75.23%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKG 512 S+++ + DR NP P+ CLG+F LSL TTE DL E+F RYG + DV++V D+ + R RGF FVY +N++D++ AKE+V+G + G+ IRVD+S+T RAHTPTPG+Y G Sbjct: 89 FSNRRRHQGDRGNPEPNTCLGVFGLSLYTTEHDLREVFGRYGPVADVNVVYDQQSGRPRGFAFVYMQNMEDSKEAKERVNGMELDGRNIRVDFSITKRAHTPTPGIYMG 197
BLAST of Transformer 2 protein vs. Ensembl Sea Lamprey
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 130.183 bits (326), Expect = 1.372e-34 Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 168 RSNIVTMSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKT 521 R + MS+++ R NP PS CLG+F LSL T EKDL E+F RYG ++ V++V D+ + RSRGF FVYF N +DA+ AKE+ +G + G+ IRVD+S+T RAHTPTPG+Y G T Sbjct: 89 RHSRSPMSNRRRHLGSRVNPDPSCCLGVFGLSLHTGEKDLKEVFSRYGPVQSVNVVYDQQSGRSRGFAFVYFDNSEDAKEAKERANGMELDGRYIRVDFSITKRAHTPTPGIYMGRPT 206
BLAST of Transformer 2 protein vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860]) HSP 1 Score: 67.3958 bits (163), Expect = 2.250e-12 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 249 IFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVD 461 + L+++TTEK L F +YG + DV L+ D+ T SRGF FV F N +DA+ A+ +G +++G+ +RVD Sbjct: 11 VGGLNIDTTEKALEATFSKYGRVADVLLMKDRETNLSRGFAFVTFANPEDAKEAERDANGKVLEGRAMRVD 81
BLAST of Transformer 2 protein vs. Ensembl Sea Lamprey
Match: srsf2b (serine and arginine rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]) HSP 1 Score: 63.1586 bits (152), Expect = 1.209e-11 Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 3 Query: 231 PSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTP 491 PS+ L + NL+ T+ + L F +YG++ DV + D+ T+ SRGF FV F + DAE A + + G ++ G+++RV + R P Sbjct: 6 PSRALQVDNLTYRTSPEMLRRSFEKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDAMDAMDGKMLDGRELRVQVARYSRPADP 92
BLAST of Transformer 2 protein vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860]) HSP 1 Score: 62.7734 bits (151), Expect = 5.670e-11 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 231 PSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVD 461 P K I LS +T E L +F +YG + +V ++ D+ T RSRGF FV F N DDA+ A+ ++G + G+ I+V+ Sbjct: 6 PGKLF-IGGLSTDTNENALETIFSKYGRVAEVLIMKDRETNRSRGFAFVTFANPDDAKGAERDMNGKPLDGRNIKVE 81
BLAST of Transformer 2 protein vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 56.225 bits (134), Expect = 5.979e-9 Identity = 25/79 (31.65%), Postives = 46/79 (58.23%), Query Frame = 3 Query: 231 PSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYS 467 PS L + NLS + E+F ++GE+ V + T++ +GFG+V F N++DA+ A + + G + + +R+D+S Sbjct: 265 PSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFS 343
BLAST of Transformer 2 protein vs. Ensembl Yeast
Match: NAM8 (RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function [Source:SGD;Acc:S000001128]) HSP 1 Score: 53.5286 bits (127), Expect = 5.477e-8 Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 258 LSLETTEKDLHEMFF-RYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRV 458 L+ TE L E+F RY +V D+VT S+G+GFV F N D+ ++A ++ G + G+ I+V Sbjct: 170 LAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKV 237
BLAST of Transformer 2 protein vs. Ensembl Yeast
Match: MIP6 (Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication [Source:SGD;Acc:S000001057]) HSP 1 Score: 49.6766 bits (117), Expect = 9.386e-7 Identity = 25/72 (34.72%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 243 LGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRV 458 L I NL TE+ L ++F RY E + D +TK+S G+G++ FK+ +DAE A+++ + T+ G+++++ Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEFNYTVFFGQEVKI 184
BLAST of Transformer 2 protein vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 48.521 bits (114), Expect = 1.609e-6 Identity = 21/46 (45.65%), Postives = 31/46 (67.39%), Query Frame = 3 Query: 249 IFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFK 386 I L+ +TTE +L E F +YG + D+ ++ D T RSRGFGF+ F+ Sbjct: 163 IGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
BLAST of Transformer 2 protein vs. Ensembl Yeast
Match: NOP15 (Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm [Source:SGD;Acc:S000005054]) HSP 1 Score: 46.595 bits (109), Expect = 2.722e-6 Identity = 24/63 (38.10%), Postives = 42/63 (66.67%), Query Frame = 3 Query: 276 EKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGK--QIRV 458 EK+L + F ++G++++V L +K T SR +GF+ F N +DA IA+E ++ ++ G Q+RV Sbjct: 104 EKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRV 166
BLAST of Transformer 2 protein vs. Ensembl Nematostella
Match: EDO44802 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUS7]) HSP 1 Score: 139.428 bits (350), Expect = 1.276e-38 Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 150 NPFEPYRSNIV--TMSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKG 512 NP+ R N +S++K + +RDNP PS+CLG+F LSL TTE+DL +F +YG +E + +V D T RSRGFGFVY+++ DAE+AKE+ G + G++IRVDYSVT RAHTPTPGVY G Sbjct: 64 NPYYKGRRNSSHSPLSNRKRHQGNRDNPSPSRCLGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQTGRSRGFGFVYYEDTKDAEVAKERTTGIELDGRRIRVDYSVTKRAHTPTPGVYMG 186
BLAST of Transformer 2 protein vs. Ensembl Nematostella
Match: EDO44890 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUE7]) HSP 1 Score: 55.4546 bits (132), Expect = 5.004e-10 Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 210 EDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRV 458 E+ D+ P K L + N+ + DL +MF +G I DV ++ ++ + S+GFGFV F +A A+EK++GTIV G+++ V Sbjct: 2 ENGDSSGP-KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNE--RGSKGFGFVTFNTAAEANKAREKLNGTIVDGRKVEV 81
BLAST of Transformer 2 protein vs. Ensembl Nematostella
Match: EDO39952 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8K1]) HSP 1 Score: 55.8398 bits (133), Expect = 2.551e-9 Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 234 SKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDY 464 S L + NLS T+E+ ++E+F R GE++ + + +DKV K GF FV + DAE A ++GT + + IR DY Sbjct: 26 SSTLYVGNLSFYTSEQQIYELFGRAGELKKIIMGLDKVRKTPCGFCFVEYYTRPDAENAMRYINGTRLDQRIIRTDY 102
BLAST of Transformer 2 protein vs. Ensembl Nematostella
Match: EDO49282 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RH27]) HSP 1 Score: 53.5286 bits (127), Expect = 3.761e-9 Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 3 Query: 231 PSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVY--FKNIDDAEIAKEKVHGTIVQGKQIRVDYS 467 P+ + + NL +T DL MF +YG I DV + +D T+ RGF ++Y F++I DAE A + ++ G+++ V ++ Sbjct: 8 PNSSIYVRNLHPDTRPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYITFEDIRDAEDALYYLDRAMLLGRELEVQFA 88
BLAST of Transformer 2 protein vs. Ensembl Nematostella
Match: EDO29715 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T2V2]) HSP 1 Score: 51.9878 bits (123), Expect = 8.604e-9 Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 3 Query: 255 NLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYS 467 +L E DL F YG ++ V ++ DK T RS+GFGFV N +A+ A ++++G V+G+ I V+ S Sbjct: 7 SLPFSIEEADLRGFFEEYGAVDSVKIISDKFTGRSKGFGFVEMPNDAEAQKAIDELNGGTVEGRTIVVNKS 77
BLAST of Transformer 2 protein vs. Ensembl Medaka
Match: tra2a (transformer 2a [Source:NCBI gene;Acc:100049284]) HSP 1 Score: 133.265 bits (334), Expect = 6.178e-35 Identity = 59/113 (52.21%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTH 524 MS+++ +R NP PS CLG+F LSL TTE+DL E+F +YG + +V++V D+ ++RSRGF FVYF+N +D++ AKE+ +G + G++IRVD+S+T RAHTPTPG+Y G T+ Sbjct: 98 MSNRRRHIGNRGNPDPSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTY 210
BLAST of Transformer 2 protein vs. Ensembl Medaka
Match: tra2a (transformer-2 protein homolog alpha [Source:NCBI gene;Acc:101157868]) HSP 1 Score: 130.954 bits (328), Expect = 2.947e-34 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 174 NIVTMSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHD 527 N MS ++ R+NP PS CLG+F L+L TTE+DL E+F RYG + +++V D+ T RSRGF F+YF+ + DA A E +G + G+QIRVDYS+T R HTPTPG+Y G T++ Sbjct: 88 NASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGRPTYN 205
BLAST of Transformer 2 protein vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 129.413 bits (324), Expect = 1.632e-33 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVY 506 +R NP P+ CLG+F LSL TTE+DL ++F +YG + DVS+V D+ ++RSRGF FVYF+N DA+ AKEK +G + G++IRVD+S+T R HTPTPG+Y Sbjct: 114 NRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 211
BLAST of Transformer 2 protein vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 129.028 bits (323), Expect = 2.679e-33 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVY 506 +R NP P+ CLG+F LSL TTE+DL ++F +YG + DVS+V D+ ++RSRGF FVYF+N DA+ AKEK +G + G++IRVD+S+T R HTPTPG+Y Sbjct: 123 NRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 220
BLAST of Transformer 2 protein vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 127.872 bits (320), Expect = 6.650e-33 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVY 506 +R NP P+ CLG+F LSL TTE+DL ++F +YG + DVS+V D+ ++RSRGF FVYF+N DA+ AKEK +G + G++IRVD+S+T R HTPTPG+Y Sbjct: 109 NRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 206
BLAST of Transformer 2 protein vs. Planmine SMEST
Match: SMESG000022369.1 (SMESG000022369.1) HSP 1 Score: 294.664 bits (753), Expect = 5.350e-98 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 3 Query: 186 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIGXXXXXXXXXXXXXXXXXXXXXXXEQRMDSRYRSGESFXXXXXXXXXXXXXXXXWTDYPPRRRSPFNDRPHY 746 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIGRKPNKSRSNRRNPRDRLSDRDRSEQRMDSRYRSGESFDRRGGRYEYSERRSRDWTDYPPRRRSPFNDRPHY Sbjct: 1 MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKTHDIGRKPNKSRSNRRNPRDRLSDRDRSEQRMDSRYRSGESFDRRGGRYEYSERRSRDWTDYPPRRRSPFNDRPHY 187
BLAST of Transformer 2 protein vs. Planmine SMEST
Match: SMESG000031639.1 (SMESG000031639.1) HSP 1 Score: 136.346 bits (342), Expect = 7.760e-37 Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKT 521 DRDNP PS C+G+F LSL+T EKDL+ +F +YGEI+DV LV+D T RSRGFGF+Y++ ++ A AK+ HG + G+ +R+DYS+T +AHTPTPGVY G K+ Sbjct: 79 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 181
BLAST of Transformer 2 protein vs. Planmine SMEST
Match: SMESG000031639.1 (SMESG000031639.1) HSP 1 Score: 136.346 bits (342), Expect = 8.053e-37 Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKT 521 DRDNP PS C+G+F LSL+T EKDL+ +F +YGEI+DV LV+D T RSRGFGF+Y++ ++ A AK+ HG + G+ +R+DYS+T +AHTPTPGVY G K+ Sbjct: 80 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 182
BLAST of Transformer 2 protein vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1) HSP 1 Score: 135.961 bits (341), Expect = 1.507e-36 Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKT 521 DRDNP PS C+G+F LSL+T EKDL+ +F +YGEI+DV LV+D T RSRGFGF+Y++ ++ A AK+ HG + G+ +R+DYS+T +AHTPTPGVY G K+ Sbjct: 79 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 181
BLAST of Transformer 2 protein vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1) HSP 1 Score: 135.576 bits (340), Expect = 1.596e-36 Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 213 DRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVIDKVTKRSRGFGFVYFKNIDDAEIAKEKVHGTIVQGKQIRVDYSVTLRAHTPTPGVYKGTKT 521 DRDNP PS C+G+F LSL+T EKDL+ +F +YGEI+DV LV+D T RSRGFGF+Y++ ++ A AK+ HG + G+ +R+DYS+T +AHTPTPGVY G K+ Sbjct: 80 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 182 The following BLAST results are available for this feature:
BLAST of Transformer 2 protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Transformer 2 protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Transformer 2 protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Transformer 2 protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Transformer 2 protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012773 ID=SMED30012773|Name=Transformer 2 protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1585bpback to top protein sequence of SMED30012773-orf-1 >SMED30012773-orf-1 ID=SMED30012773-orf-1|Name=SMED30012773-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=188bp MSDKKIDKEDRDNPLPSKCLGIFNLSLETTEKDLHEMFFRYGEIEDVSLVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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