Protein CLP1 homolog
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012699 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12
Homology
BLAST of Protein CLP1 homolog vs. Ensembl Human
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:HGNC:16999]) HSP 1 Score: 121.709 bits (304), Expect = 1.126e-28 Identity = 108/404 (26.73%), Postives = 180/404 (44.55%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + + + + +S + + ++++T V + TV++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLS 403
BLAST of Protein CLP1 homolog vs. Ensembl Human
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:HGNC:16999]) HSP 1 Score: 121.709 bits (304), Expect = 1.126e-28 Identity = 108/404 (26.73%), Postives = 180/404 (44.55%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + + + + +S + + ++++T V + TV++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLS 403
BLAST of Protein CLP1 homolog vs. Ensembl Human
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:HGNC:16999]) HSP 1 Score: 122.094 bits (305), Expect = 1.172e-28 Identity = 111/405 (27.41%), Postives = 183/405 (45.19%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDE-ISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + ++S A +E +S + + ++++T V + TV++ Sbjct: 19 DKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMV-HHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLS 414
BLAST of Protein CLP1 homolog vs. Ensembl Human
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:HGNC:16999]) HSP 1 Score: 63.1586 bits (152), Expect = 9.643e-10 Identity = 45/139 (32.37%), Postives = 64/139 (46.04%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSV 2131 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAI 139
BLAST of Protein CLP1 homolog vs. Ensembl Human
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:HGNC Symbol;Acc:HGNC:16999]) HSP 1 Score: 55.4546 bits (132), Expect = 2.158e-8 Identity = 39/120 (32.50%), Postives = 55/120 (45.83%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGP 2074 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP 122
BLAST of Protein CLP1 homolog vs. Ensembl Celegans
Match: clpf-1 (pep chromosome:WBcel235:III:3397743:3400644:1 gene:WBGene00010304.1 transcript:F59A2.4a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:clpf-1) HSP 1 Score: 125.176 bits (313), Expect = 3.414e-30 Identity = 114/405 (28.15%), Postives = 193/405 (47.65%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNII-LNIHYDLE---LKRIEALK---NDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSSE---IILKAIQLFEVNVLLLISDSSTI-NLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHK----LFKHELKADEVKI--YYTKSLNDS----------NDSNFINIPFQEIILNSVCALSQALSFDE-ISTSPILCYLLITDVSECYSTLTVMTEREFWPELYSILVLNGI 2917 ++V + L KG AEI+GT L N + + ++ G +I ++G V P +I LNIH +E KR E N +GPR+L+ GP +T++R L NYSVR GRT V LD N +P +++ ++Q D+ G++ N P+VFNFG SP AN LY +A +N + + ++ IGG IIN + E I+KA FEV+V++++ +LS ++PE+V++ ++PK + +R E +H YFY F ++ D+V + + L DS +++ + + I + + A S++ DE + SP+ + L+T+V T++++ + P +LV + I Sbjct: 25 SDVCLELVKGYAEIFGTELLLNKKYTFPAKSRVAAFTWKGATIELVGTTESAYVAE-----STPMVIYLNIHAAMEEVRKKREEQAAGNSNKAKGPRLLLVGP--TDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSVSVPGTVAAVLVQKTADVIDGFER-NQPIVFNFGHTSPSANLSLYEALFKEMATTLNAQIQENDEAKIGGMIINTCGWVDGEGYKCIVKAASAFEVDVVIVLDHERLYSDLSKELPEFVRLTHVPKSGGVEQRTGQIRSKMRGENVHRYFYGTRANNLYPFTFDVSFDDVTLCKIGAEQLPDSCLPFGMEVENHETKLVIMEPSADIKHHLFAFSRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPS--KVLVFSDI 419
BLAST of Protein CLP1 homolog vs. Ensembl Fly
Match: cbc (gene:FBgn0033842 transcript:FBtr0087701) HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-17 Identity = 94/400 (23.50%), Postives = 168/400 (42.00%), Query Frame = 2 Query: 1721 LDSKSGNKIILNSEEIVRFFCLNN---VRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNII--LNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYV------NIRCEXXXXXXXXXXXXXXXSFHSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKL----FKHELKADEVKIYYTKS--LNDS----------NDSNFINIPFQEIILNSVCALSQALSF-DEISTSPILCYLLITDV 2833 + G L S+ +RF V + L G AE++GT L + E I ++ GC + V G ++ +C+ + ++ +N H LE R+EA + D GP ++ GP STL R L NY+VR GR +LD + S++ +I+ ++ G+ PLV++FG SP N LY + +A N R ++ ++ + G + +L A + + + ++ N L VP+ V ++ +PK + R +RI YFY + F E+K ++++Y + L DS N + + + +++ V ALS A S D++ + + + +T+V Sbjct: 1 MSEDQGKDYTLESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAIFTYQGCVLHVSGKMD------VCYISKETPMVQYVNCHAALEQFRMEAEEKDRYGPVAMVVGP--MDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFA-KTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAH---LLHAAKAYGACAIFVLDQERLYNELLRDVPKGVHVVLLPKSGGVVERSKELRHEARDQRIKEYFYGNTRAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHHVLALSFAESVEDDVIGTNVAGFCCVTEV 388
BLAST of Protein CLP1 homolog vs. Ensembl Fly
Match: Pcf11 (gene:FBgn0264962 transcript:FBtr0302560) HSP 1 Score: 54.299 bits (129), Expect = 6.568e-7 Identity = 33/117 (28.21%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSV------IDIREKSKYYFIRKSWENHFP 439 E+ + L L+ N+ LI L++ AEE N A V ++ I + + K+ LY++D I+KNV Y++LF + + +F+ + SV + + + + Y +R++W FP Sbjct: 18 EYLSSLQDLNCNSKPLINMLTMLAEE---NINYAHIIVKVVEYYISQVAPEFKLPILYLIDSIVKNVKSSYVQLFGQCIVNIFLHAFESVQHSQSQVLEKVRERMYALRQTWNEVFP 131
BLAST of Protein CLP1 homolog vs. Ensembl Fly
Match: Pcf11 (gene:FBgn0264962 transcript:FBtr0345528) HSP 1 Score: 54.299 bits (129), Expect = 6.568e-7 Identity = 33/117 (28.21%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSV------IDIREKSKYYFIRKSWENHFP 439 E+ + L L+ N+ LI L++ AEE N A V ++ I + + K+ LY++D I+KNV Y++LF + + +F+ + SV + + + + Y +R++W FP Sbjct: 18 EYLSSLQDLNCNSKPLINMLTMLAEE---NINYAHIIVKVVEYYISQVAPEFKLPILYLIDSIVKNVKSSYVQLFGQCIVNIFLHAFESVQHSQSQVLEKVRERMYALRQTWNEVFP 131
BLAST of Protein CLP1 homolog vs. Ensembl Fly
Match: Pcf11 (gene:FBgn0264962 transcript:FBtr0339986) HSP 1 Score: 54.299 bits (129), Expect = 6.784e-7 Identity = 33/117 (28.21%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSV------IDIREKSKYYFIRKSWENHFP 439 E+ + L L+ N+ LI L++ AEE N A V ++ I + + K+ LY++D I+KNV Y++LF + + +F+ + SV + + + + Y +R++W FP Sbjct: 18 EYLSSLQDLNCNSKPLINMLTMLAEE---NINYAHIIVKVVEYYISQVAPEFKLPILYLIDSIVKNVKSSYVQLFGQCIVNIFLHAFESVQHSQSQVLEKVRERMYALRQTWNEVFP 131
BLAST of Protein CLP1 homolog vs. Ensembl Fly
Match: Pcf11 (gene:FBgn0264962 transcript:FBtr0339985) HSP 1 Score: 54.299 bits (129), Expect = 6.915e-7 Identity = 33/117 (28.21%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSV------IDIREKSKYYFIRKSWENHFP 439 E+ + L L+ N+ LI L++ AEE N A V ++ I + + K+ LY++D I+KNV Y++LF + + +F+ + SV + + + + Y +R++W FP Sbjct: 18 EYLSSLQDLNCNSKPLINMLTMLAEE---NINYAHIIVKVVEYYISQVAPEFKLPILYLIDSIVKNVKSSYVQLFGQCIVNIFLHAFESVQHSQSQVLEKVRERMYALRQTWNEVFP 131
BLAST of Protein CLP1 homolog vs. Ensembl Zebrafish
Match: clp1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:565621]) HSP 1 Score: 114.39 bits (285), Expect = 2.781e-26 Identity = 108/401 (26.93%), Postives = 183/401 (45.64%), Query Frame = 2 Query: 1751 LNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY--EQHKLFKH--ELKADEVKIYY--TKSLNDS--------NDSNFINIPFQE--------IILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 L+ E +RF V++ L G AEI+G+ L N + + + ++ GC + + G V K LY LN H LE R +A K++ RGPR+++ GP ST+ R L NY+VR GR LV LD + +P ++S I+ D+ G+ PLVF+FG +P N +LY + +LA+ + RCE + +GGCIIN + + ++ F+V+V+L++ N L +P +V+++ +PK R E+I YFY + H +++ +V+IY S+ DS +D+ +P + ++SV ++ I SP ++++T V +TV++ Sbjct: 29 LDKETELRFEVEAGERVQLELLSGLAEIFGSELNRNKKYTFGPGSKIAVFTWQGCGVALSGKTEVAYVSKDTPMLLY-----LNTHAALEQMRRQAEKDNERGPRVMVVGP--TDVGKSTVCRMLLNYAVRLGRRPTLVELDVGQSSVSVPGTMSALCIERPADVEEGFSV-QAPLVFHFGSTTPGTNIKLYNKLTSSLADAFSQRCEVNRRASVGGCIINTCGWVKGSGYQALVHCASAFQVDVVLVLDQERLYNELKRDLPHFVRVVLLPKSGGVVERSKDCRRETRDEKIREYFYGFRGTSFYPHAFDVRFSDVRIYKIGAPSIPDSCLPLGMSQDDTQLKLVPVSPGRDLTHHVLSVSSVDDEAEVGQSRGILESPACGFIVVTAVDTQAQVMTVLS 421
BLAST of Protein CLP1 homolog vs. Ensembl Zebrafish
Match: pcf11 (PCF11 cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]) HSP 1 Score: 60.4622 bits (145), Expect = 1.232e-8 Identity = 50/154 (32.47%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKE--NDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLWRNDSLAFNTAIVNKSINKNNETL 562 E+++ L L N+ I L++ AEE+ + DI+A +I +I +AP K+ LY++D I+KNVG Y+++F+K+L FI V +D + + +R +W+ FP L +D ++ +DP W L N VN SI+ N + L Sbjct: 13 EYQSSLEDLTFNSKPHINMLTILAEENIQFTKDIVA-----IIEAQIAKAPPVEKLPVLYLVDSIVKNVGGAYLEVFAKNLVNSFI-CVFEKVDEGTRKSLFKLRSTWDEIFPLKKLYALDVRVNSVDPAWPIKPLPPN---VNASIHVNPKFL 157
BLAST of Protein CLP1 homolog vs. Ensembl Zebrafish
Match: pcf11 (PCF11 cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]) HSP 1 Score: 60.4622 bits (145), Expect = 1.306e-8 Identity = 50/154 (32.47%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKE--NDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLWRNDSLAFNTAIVNKSINKNNETL 562 E+++ L L N+ I L++ AEE+ + DI+A +I +I +AP K+ LY++D I+KNVG Y+++F+K+L FI V +D + + +R +W+ FP L +D ++ +DP W L N VN SI+ N + L Sbjct: 13 EYQSSLEDLTFNSKPHINMLTILAEENIQFTKDIVA-----IIEAQIAKAPPVEKLPVLYLVDSIVKNVGGAYLEVFAKNLVNSFI-CVFEKVDEGTRKSLFKLRSTWDEIFPLKKLYALDVRVNSVDPAWPIKPLPPN---VNASIHVNPKFL 157
BLAST of Protein CLP1 homolog vs. Ensembl Xenopus
Match: clp1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:493364]) HSP 1 Score: 125.561 bits (314), Expect = 6.020e-30 Identity = 106/383 (27.68%), Postives = 181/383 (47.26%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY-EQHKLFKH--ELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEII--LNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 + VR+ L G AE++GT L N + + I ++ GC++ + G+ + V + LY LN LE R +A + RGPR+L+ GP STL R L NY+VR GR LV LD +P ++ ++ D+ G+ PLV++FG +P N +LY + LA+ N+RC+++ + GC+IN + + ++ A FEV+V+L++ N L +P +V+ + +PK + + R +R+ YFY + L+ H E+K EV++Y + L S + N + + P +++ L SV L + + I + +++IT V TLTV++ Sbjct: 41 DPVRVELVSGLAEVFGTELTRNKKYTFPPGSRAAIFTWHGCTVQLWGSPDVAYVSRDTPMLLY-----LNTQVGLEQMRAQAEREGERGPRVLVAGP--SDVGKSTLCRLLLNYAVRRGRRPTLVELDVGQGSVSVPGTVGALCVERPADVEEGFS-AQAPLVYHFGSTTPGTNIKLYNKLTSRLAHVFNLRCDSNRRASVSGCLINTCGWVKGSGYQALIHAASAFEVDVVLVLDQERLYNDLLRDLPHFVRTLLLPKSGGASERSKECRRESRDQRVREYFYGPRGSLYPHAFEIKFSEVRVYKVGAPSIPDSCLPLGMSQEDNQLKLVPVTPGRDMAHHLLSVVPLDGGGAEEGIEERSVAGFIVITGVDTERQTLTVLS 415
BLAST of Protein CLP1 homolog vs. Ensembl Xenopus
Match: pcf11 (PCF11, cleavage and polyadenylation factor subunit [Source:NCBI gene;Acc:100170197]) HSP 1 Score: 57.7658 bits (138), Expect = 1.160e-7 Identity = 54/208 (25.96%), Postives = 98/208 (47.12%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLW---------RNDSLAFNTAIVNKSINKNNETLQSLPIVSSKLKSESYVYWKDNMCTPN--IDCNKENVEIDFPSTNELL 697 ++++ L L N+ I L++ AEE+ + A V LI +I +A K+ +Y++D I+KNVG Y+ F+K+L FI V +D + Y +R +W+ FP L +D + +IDP W S+ N +NKS+ + T P+ + K S+ + + + ++ ++ +E++ T E L Sbjct: 14 DYQSSLEDLTFNSKPHINMLTILAEENVQ---FAKDIVILIEAQIAKARATEKLPVMYLMDSIVKNVGRDYLAAFAKNLVTTFI-CVFEKVDENTRKSLYKLRSTWDELFPSKKLYALDVRVSQIDPAWPVKPLPPNVNTSSIHVNPKFLNKSLGLYSPTKALPPVQAQKHLSQEQLIRQQLLVKQKQLLELQQKKLELELEQTREQL 217
BLAST of Protein CLP1 homolog vs. Ensembl Xenopus
Match: pcf11 (PCF11, cleavage and polyadenylation factor subunit [Source:NCBI gene;Acc:100170197]) HSP 1 Score: 55.8398 bits (133), Expect = 4.608e-7 Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLW 493 ++++ L L N+ I L++ AEE+ + A V LI +I +A K+ +Y++D I+KNVG Y+ F+K+L FI V +D + Y +R +W+ FP L +D + +IDP W Sbjct: 14 DYQSSLEDLTFNSKPHINMLTILAEENVQ---FAKDIVILIEAQIAKARATEKLPVMYLMDSIVKNVGRDYLAAFAKNLVTTFI-CVFEKVDENTRKSLYKLRSTWDELFPSKKLYALDVRVSQIDPAW 138
BLAST of Protein CLP1 homolog vs. Ensembl Mouse
Match: Clp1 (CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]) HSP 1 Score: 122.865 bits (307), Expect = 3.358e-29 Identity = 108/404 (26.73%), Postives = 181/404 (44.80%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + + + + +S + + ++++T V + TV++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGYGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDVEHQVFTVLS 403
BLAST of Protein CLP1 homolog vs. Ensembl Mouse
Match: Clp1 (CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]) HSP 1 Score: 122.865 bits (307), Expect = 3.358e-29 Identity = 108/404 (26.73%), Postives = 181/404 (44.80%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + + + + +S + + ++++T V + TV++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGYGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDVEHQVFTVLS 403
BLAST of Protein CLP1 homolog vs. Ensembl Mouse
Match: Pcf11 (PCF11 cleavage and polyadenylation factor subunit [Source:MGI Symbol;Acc:MGI:1919579]) HSP 1 Score: 60.8474 bits (146), Expect = 1.027e-8 Identity = 49/171 (28.65%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLW---------RNDSLAFNTAIVNKSINKNNE--TLQSLPIVSS 586 ++++ L L N+ I L++ AEE N A V+LI + +AP K+ +Y++D I+KNVG Y+ F+K+L FI V +D + + +R +W+ FP L +D ++ +DP W S+ N +NKS ++ + T+ S P +S+ Sbjct: 21 DYQSSLEDLTFNSKPHINMLTILAEE---NLPFAKEIVSLIEAQTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFI-CVFEKVDENTRKSLFKLRSTWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPDEPSTPGTVVSSPSIST 187
BLAST of Protein CLP1 homolog vs. UniProt/SwissProt
Match: sp|Q6NS21|CLP1_XENLA (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Xenopus laevis OX=8355 GN=clp1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.217e-30 Identity = 105/383 (27.42%), Postives = 182/383 (47.52%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY-EQHKLFKH--ELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEII--LNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 + VR+ L G AE++GT L N + + I ++ GC++ + G+ + V + LY LN LE R++A + RGPR+L+ GP STL R L NY+VR GR LV LD +P ++ ++ D+ G+ PLV++FG +P N +LY + LA+ N+RC+++ + GC+IN + + ++ A FEV+V+L++ N L +P +V+ + +PK + + R +R+ YFY + L+ H E+K EV++Y + L S + N + + P +++ L SV L + + I + +++IT V TLT+++ Sbjct: 43 DPVRVELVSGLAEVFGTELTRNKKYTFPPGSRAAIFTWHGCTVQLWGSPDMAYVSRDTPMLLY-----LNTQVGLEQMRVQAEREGERGPRVLVAGP--SDVGKSTLCRLLLNYAVRRGRRPTLVELDVGQGSVSVPGTMGALCVERPADVEEGFS-AQAPLVYHFGSTTPGTNIKLYNKLTSRLAHVFNLRCDSNRRASVSGCLINTCGWVKGSGYQALIHAASAFEVDVVLVLDQERLYNDLLRDLPHFVRTLLLPKSGGASERSKECRRESRDQRVREYFYGPRGSLYPHAFEIKFSEVRVYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMAHHLLSVVPLDGGSAEEGIEERSVAGFIVITGVDTERQTLTLLS 417
BLAST of Protein CLP1 homolog vs. UniProt/SwissProt
Match: sp|Q66JK4|CLP1_XENTR (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Xenopus tropicalis OX=8364 GN=clp1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.189e-29 Identity = 106/383 (27.68%), Postives = 181/383 (47.26%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY-EQHKLFKH--ELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEII--LNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 + VR+ L G AE++GT L N + + I ++ GC++ + G+ + V + LY LN LE R +A + RGPR+L+ GP STL R L NY+VR GR LV LD +P ++ ++ D+ G+ PLV++FG +P N +LY + LA+ N+RC+++ + GC+IN + + ++ A FEV+V+L++ N L +P +V+ + +PK + + R +R+ YFY + L+ H E+K EV++Y + L S + N + + P +++ L SV L + + I + +++IT V TLTV++ Sbjct: 41 DPVRVELVSGLAEVFGTELTRNKKYTFPPGSRAAIFTWHGCTVQLWGSPDVAYVSRDTPMLLY-----LNTQVGLEQMRAQAEREGERGPRVLVAGP--SDVGKSTLCRLLLNYAVRRGRRPTLVELDVGQGSVSVPGTVGALCVERPADVEEGFS-AQAPLVYHFGSTTPGTNIKLYNKLTSRLAHVFNLRCDSNRRASVSGCLINTCGWVKGSGYQALIHAASAFEVDVVLVLDQERLYNDLLRDLPHFVRTLLLPKSGGASERSKECRRESRDQRVREYFYGPRGSLYPHAFEIKFSEVRVYKVGAPSIPDSCLPLGMSQEDNQLKLVPVTPGRDMAHHLLSVVPLDGGGAEEGIEERSVAGFIVITGVDTERQTLTVLS 415
BLAST of Protein CLP1 homolog vs. UniProt/SwissProt
Match: sp|P52874|CLP1_CAEEL (Protein clpf-1 OS=Caenorhabditis elegans OX=6239 GN=clpf-1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.343e-29 Identity = 114/405 (28.15%), Postives = 193/405 (47.65%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNII-LNIHYDLE---LKRIEALK---NDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSSE---IILKAIQLFEVNVLLLISDSSTI-NLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHK----LFKHELKADEVKI--YYTKSLNDS----------NDSNFINIPFQEIILNSVCALSQALSFDE-ISTSPILCYLLITDVSECYSTLTVMTEREFWPELYSILVLNGI 2917 ++V + L KG AEI+GT L N + + ++ G +I ++G V P +I LNIH +E KR E N +GPR+L+ GP +T++R L NYSVR GRT V LD N +P +++ ++Q D+ G++ N P+VFNFG SP AN LY +A +N + + ++ IGG IIN + E I+KA FEV+V++++ +LS ++PE+V++ ++PK + +R E +H YFY F ++ D+V + + L DS +++ + + I + + A S++ DE + SP+ + L+T+V T++++ + P +LV + I Sbjct: 25 SDVCLELVKGYAEIFGTELLLNKKYTFPAKSRVAAFTWKGATIELVGTTESAYVAE-----STPMVIYLNIHAAMEEVRKKREEQAAGNSNKAKGPRLLLVGP--TDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSVSVPGTVAAVLVQKTADVIDGFER-NQPIVFNFGHTSPSANLSLYEALFKEMATTLNAQIQENDEAKIGGMIINTCGWVDGEGYKCIVKAASAFEVDVVIVLDHERLYSDLSKELPEFVRLTHVPKSGGVEQRTGQIRSKMRGENVHRYFYGTRANNLYPFTFDVSFDDVTLCKIGAEQLPDSCLPFGMEVENHETKLVIMEPSADIKHHLFAFSRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPS--KVLVFSDI 419
BLAST of Protein CLP1 homolog vs. UniProt/SwissProt
Match: sp|Q5PQL4|CLP1_RAT (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Rattus norvegicus OX=10116 GN=Clp1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.349e-28 Identity = 108/404 (26.73%), Postives = 181/404 (44.80%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + + + + +S + + ++++T V + TV++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGYGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDVEHQVFTVLS 403
BLAST of Protein CLP1 homolog vs. UniProt/SwissProt
Match: sp|Q99LI9|CLP1_MOUSE (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Mus musculus OX=10090 GN=Clp1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.349e-28 Identity = 108/404 (26.73%), Postives = 181/404 (44.80%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFF--CLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLF---KHELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 D K K L E +RF +V++ L G AEI+GT L N + + ++ GCS+ + G V K LY LN H LE R +A K + RGPR+++ GP ST+ R L NY+VR GR V LD +P ++ I+ D+ G+ PLV++FG +P N +LY + LA+ N RCE + + GC+IN + + + ++ A FEV+V++++ N L +P +V+ + +PK R ERI YFY F +K +VKIY + L S + N + + P ++++ + + + + + +S + + ++++T V + TV++ Sbjct: 8 DKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLY-----LNTHTALEQMRRQAEKEEERGPRVMVVGP--TDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI-QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGYGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDVEHQVFTVLS 403
BLAST of Protein CLP1 homolog vs. TrEMBL
Match: A0A0R3UH12 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS6569 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.049e-41 Identity = 129/420 (30.71%), Postives = 208/420 (49.52%), Query Frame = 2 Query: 1721 LDSKSGNKIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS--------EIILKAIQLFEVNVLLLISDS--STINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYE---QHKLFKHELK--ADEVKIYYT------------KSLNDSNDSNFINIPF-----QEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMTEREFWP 2884 L S + +L +++R+ V++ L G AEI+GT L E+ + I++F GC I+V G+ + V + D P++ +NIH +L++ R +A + RGPR+L+ GP E S L RTLANY+ R G LV+++ N +P++I+ + +DL GW DPLVF FG P AN L+ EQ+ LA+ VNIR END+ + GCIIN G F + E I FEV+++L+I D ST L + + V+II +P+ N P++ R R+ AYF+ Q +L H LK A E +Y + + ++ P ++ + N + A+SQA + I +SP+ ++++ V++ S+ V++ P Sbjct: 6 LPSVQTTEYVLKKYQMLRYEANAQVKLVLVSGKAEIFGTELVCGTELIMENGQRGTIVTFHGCKILVRGSGLDAFVMTAVEDHDLPHVYMNIHANLQVARKKATEEQSRGPRVLVCGP--ECVGKSVLCRTLANYATRRGSKPILVDVNVGLNQVCIPSTIAALAVTKPYDLLEGWGLEEDPLVFCFGHLDPSANLNLFREQVSQLADLVNIRSENDSKVFSSGCIINMGGFSKTADRKQAGLEAIRTTASAFEVDIVLVIEDGFLSTF-LHEDLSKEVKIIRLPRSSGAVNCSPEQCMLQRDLRVSAYFHGENLQRRLHPHHLKLNASEYTVYKVGNEVIPDSLLPHGARDAEEETKGWRTPIALTVSRDTLKNRLLAVSQATELERIPSSPVYGFVVVLSVADDRSSFNVLSPSPELP 422
BLAST of Protein CLP1 homolog vs. TrEMBL
Match: A0A0X3NU72 (Protein CLP1 homolog OS=Schistocephalus solidus OX=70667 GN=CLP1 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 8.956e-40 Identity = 126/399 (31.58%), Postives = 194/399 (48.62%), Query Frame = 2 Query: 1748 ILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS---------EIILKAIQLFEVNVLLLISDS-STINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY---EQHKLFKHE--LKADEVKIYY--TKSLNDS----------NDSNFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVM 2863 +L +++RF +V I L G AEI+GT + ++ L I++F GC I V + + D P++ +NIH +LE R +A++ RGPR+LI G E+ STL RTL NY+ R LV+++ N +P +++ + +DL GW DPLVF FG P AN L+ EQ++ LA+ VNIR END + GCIIN G F + I FEV+ +L+I D T L +P+ V II +PK P++ R R+ AYF+ Q +L H+ L E +Y T+++ D+ I +P + N + A+SQA D+I +PI ++++ VSE ++ V+ Sbjct: 16 VLEKYQMLRFEASCSVSIVLISGMAEIFGTEIVCGTDLLLEAGQRGTIVTFHGCKIAVKDQGLAAYIMTAAEDQEIPHVFINIHANLEAARKKAVETQSRGPRVLICGQ--ESVGKSTLCRTLVNYATRKNAKPILVDVNVGLNQICIPTTMAAMAVTKPYDLYEGWGLEEDPLVFCFGHLDPAANLNLFREQVNQLADLVNIRSENDAKVFTSGCIINMGGFSKGGKDGKQGGIQAIRTTAAAFEVDTVLVIEDGFLTSFLQEDLPKEVTIIRLPKSSGVVTRSPEQWMRQRDLRVRAYFHGENPQRRLHPHQLTLSTSEYSVYKVGTEAIPDALLPHGAREEETWRTPIPVPINRDLKNRLLAVSQATEVDQIPEAPIYGFMVVLSVSEDRTSFNVL 412
BLAST of Protein CLP1 homolog vs. TrEMBL
Match: A0A087VYM0 (Polyribonucleotide 5' hydroxyl kinase Clp1 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000118700 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.602e-39 Identity = 128/410 (31.22%), Postives = 204/410 (49.76%), Query Frame = 2 Query: 1751 LNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS----EIILKAIQ----LFEVNVLLLISDS--STINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQ---HKLFKHELK--ADEVKIYYTKS------------LNDSNDSNFINIPF-----QEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMTEREFWP 2884 L +++R+ + V+I + GTAEI+GT L ++ L +++F GC I V G+ + V D ++ +NIH +L+ R +A ++ RGPR+L+ GP E S L RTLANY+ R G LV+ + N +P++I+ + +DL GW DPLVF FG P AN L+ EQ++ LA+ VNIR END + GCII G F + + L AI+ FEV++ L+I D ST L + + V II +P+ NF PK+ R RI AYF+ + +L H L+ A E +Y S + ++ P ++ + N + A+SQA ++I++SP+ ++++ V+E + V++ P Sbjct: 17 LEKYQMLRYEANSQVKIVMTSGTAEIFGTELVCGTDLVLEAGERGTVVTFHGCKITVKGSGLDAFVMDAVEDHDLLHVYVNIHANLQEARKKATEDQSRGPRVLVCGP--ENVGKSVLCRTLANYAARRGSKPILVDANVGLNQVCIPSTIAALAVTKPYDLLEGWGLEEDPLVFCFGHLDPSANLNLFREQVNQLADLVNIRSENDAKVFSSGCIIKMGGFSKTPEKKQAGLDAIRTTAAAFEVDIALVIEDGFLSTF-LQEDLSKDVTIIRLPRSSGAINFTPKQSMRQRDLRISAYFHGENLKRRLHPHHLRLSASEYTVYRVGSEAIPDALLPHGARDAEEETQSWRTPIALTVSRDALKNRLLAVSQATDPEQIASSPVFGFVVVLSVAEDRTHFNVLSPSPELP 423
BLAST of Protein CLP1 homolog vs. TrEMBL
Match: A0A0R3W855 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6519 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 9.757e-37 Identity = 131/417 (31.41%), Postives = 207/417 (49.64%), Query Frame = 2 Query: 1751 LNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQ-----LDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS----EIILKAIQ----LFEVNVLLLISDS--STINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQ---HKLFKHELK--ADEVKIYYTKS------------LNDSNDSNFINIPF-----QEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMTEREFWPEL 2890 L +++R+ V+I + GTAEI+GT L ++ L++ +++F GC I V G + V D ++ +NIH +L+ R +A ++ RGPR+L+ GP E S L RTL NY+ R G LV+++ N +P++I+ + +DL GW DPLVF FG P AN L+ EQ ++ LA VNIR END + GCII G F + E L+AI+ FEV+++L+I D ST L + + V II +P+ NF PK+ R RI AYF+ + +L H LK A E +Y S + ++ P ++ + N + A+SQA ++I++SP+ ++++ V+E + V++ PEL Sbjct: 17 LEKYQMLRYEANAQVKIVMTSGTAEIFGTELVCGTDLVLQEGERGTVVTFHGCKITVKGLGLDAFVMDAVEDHDLLHVYMNIHANLQEARKKATEDQSRGPRVLVCGP--ENVGKSVLCRTLVNYAARRGSKPILVDVNVGLNQVCIPSTIAALAVTKPYDLLEGWGLEEDPLVFCFGHLDPSANLNLFTEQASSNIVNQLAELVNIRSENDAKVFSSGCIIKMGGFSKTPEKKEAGLEAIRTTAAAFEVDIVLVIEDGFLSTF-LQEDLLKDVTIIRLPRSSGAVNFNPKQSMRQRDLRISAYFHGENFKRRLHPHHLKLSASEYTVYRVGSEAIPDALLPHGARDAEAETQSWRTPIALAVSRDALKNRLLAVSQATEPEQIASSPVYGFVVVLSVAEDRTFFNVLSPS---PEL 427
BLAST of Protein CLP1 homolog vs. TrEMBL
Match: A0A430QGI2 (Polyribonucleotide 5'-hydroxyl-kinase OS=Schistosoma bovis OX=6184 GN=DC041_0005868 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.974e-36 Identity = 119/403 (29.53%), Postives = 193/403 (47.89%), Query Frame = 2 Query: 1766 IVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFH--------SSEIILKAIQ----LFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQ---HKLFKHE--LKADEVKIYYTKS------------LNDSNDSNFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMTEREFWP 2884 ++RF + + L G AE++GT L E++L +++F GC ++V + + D ++ +NIH +LE+ R +A+K RGPR+L+ G E+ STL RTLA+Y+ R LV+++ N +P +I+ + +DL GW DPLVF FG P +N L+ EQ++ LA +NIR END ++ GCIIN F S E ++AI+ FEV+ LL+I D + L +P V I+ +PK P + R R+ AY + + +L H+ LK+ E IY S + N I + + N + A+SQA ++ +P+ ++++ VSE S T+++ P Sbjct: 1 MLRFEVTSPSGLTLVSGAAEVFGTELVCGWELQLYPGQRGTVVTFHGCKLIVQDQGVAAYIIASSEDQEIVHVYMNIHANLEVSRQKAVKEQSRGPRVLVCG--QESVGKSTLCRTLASYAARRKHKPILVDVNVGLNQVCIPTTIAAISVTKPYDLMEGWSLEEDPLVFCFGHTDPASNLNLFREQVNRLAELINIRSENDMSIFTSGCIINMSGFRKDDSDGGSSKEKGIQAIRTTAAAFEVDTLLVIEDGFLASFLREDLPPEVTIVRLPKSSGAITRSPDQWTRQRDARVCAYLHGENPLRRLHPHQITLKSSEYSIYKVGSEAIPDALLPHGAQEEETWRNPIQVSVSRDLKNRLLAVSQASEPYQVPEAPVYGFIVVVSVSEDKSAFTILSPSSHPP 401
BLAST of Protein CLP1 homolog vs. Ensembl Cavefish
Match: clp1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:103032393]) HSP 1 Score: 108.997 bits (271), Expect = 1.085e-24 Identity = 102/389 (26.22%), Postives = 178/389 (45.76%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNII-LNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY--EQHKLFKH--ELKADEVKIY--YTKSLNDS--------NDSNFINIPFQEIILNSVCALSQALSFDEIST----------SPILCYLLITDVSECYSTLTVMT 2866 V++ L G E++G+ L N + + ++ GCS+ + G + +V I D P ++ LN H LE R +A +++ RGPR+++ GP ST+ R L NY+VR GR LV LD + +P ++S I+ D+ G+ PLVF+FG +P N +LY + LA + RCE + +GGCIIN + + ++ F+V+V+L++ N L +P +V+++ +PK R ++I YFY + H +++ +V+IY S+ DS +D+ +P + LS + DE+ SP+ ++++T V +TV++ Sbjct: 29 ERVQLELLTGMGEVFGSELNRNKRYTFGPGSKIAVFTWQGCSLSLSG---KTEVAYISKD--TPMLLYLNTHAALEQMRRQAERDNERGPRVMVVGP--TDVGKSTVCRVLLNYAVRLGRRPTLVELDVGQSSVSVPGTMSALCIERPADVEEGFSV-QAPLVFHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRRASVGGCIINTCGWVKGSGYQALVHCASAFQVDVVLVLDQERLYNELKRDLPHFVRVVLLPKSGGVVERSKDCRRETRDDKIREYFYGFRGTSFYPHAFDVRFSDVRIYKIGAPSIPDSCLPLGMSQDDTQLKLVPVSPGRDLTHHVLSVSCVEDEVDGGSGQSRGILESPVCGFIVVTAVDTQAQVMTVLS 409
BLAST of Protein CLP1 homolog vs. Ensembl Cavefish
Match: clp1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:103032393]) HSP 1 Score: 108.997 bits (271), Expect = 1.316e-24 Identity = 103/404 (25.50%), Postives = 185/404 (45.79%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNII-LNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY--EQHKLFKH--ELKADEVKIYY--TKSLNDS--------NDSNFINIPFQEIILNSVCALSQALSFDEIST----------SPILCYLLITDVSECYSTLTVMTEREFWPELYSILVLN 2911 V++ L G E++G+ L N + + ++ GCS+ + G + +V I D P ++ LN H LE R +A +++ RGPR+++ GP ST+ R L NY+VR GR LV LD + +P ++S I+ D+ G+ PLVF+FG +P N +LY + LA + RCE + +GGCIIN + + ++ F+V+V+L++ N L +P +V+++ +PK R ++I YFY + H +++ +V+IY S+ DS +D+ +P + LS + DE+ SP+ ++++T V +TV++ +++L+++ Sbjct: 43 ERVQLELLTGMGEVFGSELNRNKRYTFGPGSKIAVFTWQGCSLSLSG---KTEVAYISKD--TPMLLYLNTHAALEQMRRQAERDNERGPRVMVVGP--TDVGKSTVCRVLLNYAVRLGRRPTLVELDVGQSSVSVPGTMSALCIERPADVEEGFSV-QAPLVFHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRRASVGGCIINTCGWVKGSGYQALVHCASAFQVDVVLVLDQERLYNELKRDLPHFVRVVLLPKSGGVVERSKDCRRETRDDKIREYFYGFRGTSFYPHAFDVRFSDVRIYKIGAPSIPDSCLPLGMSQDDTQLKLVPVSPGRDLTHHVLSVSCVEDEVDGGSGQSRGILESPVCGFIVVTAVDTQAQVMTVLSPAPRPLPRHTLLIMD 438
BLAST of Protein CLP1 homolog vs. Ensembl Cavefish
Match: pcf11 (PCF11 cleavage and polyadenylation factor subunit [Source:NCBI gene;Acc:103026916]) HSP 1 Score: 59.6918 bits (143), Expect = 1.867e-8 Identity = 50/155 (32.26%), Postives = 84/155 (54.19%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKE--NDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLWRNDSLAFNTAIVNKSINKNNETLQ 565 E+++ L L N+ I L++ AEE+ + DI+A +I +I +AP K+ LY++D I+KNVG Y+++F+K+L FI V +D + + +R +W++ F L +D ++ IDP W L N VN SI+ N + L+ Sbjct: 13 EYQSSLEDLTFNSKPHINMLTILAEENLQFTKDIVA-----IIEAQITKAPTAEKLPVLYLVDSIVKNVGGQYLEVFAKNLVTSFI-CVFEKVDENTRKSLFKLRSTWDDIFTLKKLYALDVRVNSIDPAWPIKPLPPN---VNASIHVNPKFLK 158
BLAST of Protein CLP1 homolog vs. Ensembl Sea Lamprey
Match: clp1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:565621]) HSP 1 Score: 103.219 bits (256), Expect = 1.681e-23 Identity = 105/407 (25.80%), Postives = 184/407 (45.21%), Query Frame = 2 Query: 1724 DSKSGNKIILNSEEIVRFFC--LNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVK--VKSICFDLYKPNIILNIHYDLELKRIEALKNDV-RGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSST-INLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYE-QHKLFKH--ELKADEVKIYYTKS---------LNDSNDSNFINI----PFQEIILNSVCALSQALSFDE-ISTSPILCYLLITDVSECYSTLTVMT 2866 D + K L E +RF + L G EI+GT L N + + ++ GCS+ + G + EV K LY LN+H LE R++A + + RGPR+++ GPG STL R L +Y+ R GR LV LD +P ++++ I+ D G++ PLV++FG +P +N +LY + + LA+ + RC+ + I GC+IN + + ++ A FE+ ++ + L + +V+ + +PK R E + YFY ++ F H ++K +VK+Y + L S + N + + P ++++ + V +LS A S E + + + +L++T V TV++ Sbjct: 6 DDRPMQKFDLEKEMELRFEVEPQQTATLELLSGMGEIFGTELTRNKRYVFDAGSKVAVFTWHGCSVQLTG-LTEVAYVAKETPMLLY-----LNVHAALEQMRVQAERQEEERGPRVMVAGPG--DVGKSTLCRLLCSYAARLGRRPTLVELDVGQGSVSIPGTLALLYIERPADTEEGFNL-QAPLVYHFGSTTPSSNVKLYNKVVSKLADVFDQRCKVNRRAAISGCVINTCGWVKGAGYQALIHAATAFELPIVDKYHRAKLYTELKRDLTHFVKTVLLPKSGGVVERSKNFRREGRDELVRRYFYGFRNAYFPHAFDVKFSDVKLYKVGAPPIPDSCLPLGMSQEENQLKVVPITPGRDLV-HHVLSLSMAESTQENLVEASVAGFLVVTAVDSERQVFTVLS 402
BLAST of Protein CLP1 homolog vs. Ensembl Nematostella
Match: EDO49377 (Protein CLP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:A7RG82]) HSP 1 Score: 115.546 bits (288), Expect = 2.502e-27 Identity = 105/378 (27.78%), Postives = 186/378 (49.21%), Query Frame = 2 Query: 1799 IRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDV--RGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS---EIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY-EQHKLFKH--ELKADEVKIYYTKS--LNDS----------NDSNFINIPFQEIILNSVCALSQALSFDE-ISTSPILCYLLITDVSECYSTLTVMT 2866 I L G AE++GT L N + R + I ++ GCS+ + G + EV KS + + LN+H LE R A K++ GPR+++ GP ST+ + L NY+VR GR V+LD +P S+ +++ D+ G+ PLV+ FG SP N++LY +A+ V R E + GC+IN + + II+ A F+VNV++++ N L +Q + VQI+++PK + +R ER+ +YFY +Q L+ H E+K +VK++ + + DS N++ + + + + + + A+S A S +E + + ++ +L++ +V + V++ Sbjct: 36 IVLLSGNAEVFGTELVKNKKFTFRPGSKLAIFTWQGCSVEIQGPL-EVAYKSKETPMV---MYLNLHMALEQMRERADKHEAVELGPRVMVVGP--TDVGKSTVCQLLLNYAVRMGRRPISVDLDVGQGTASVPGSMGALLLERPADIEEGFSL-QAPLVYLFGHTSPSPNEKLYNMLSSKIADIVFQRFERNKKACASGCVINTCGWVTGMGYRIIVHAATAFKVNVIVVLDQERLYNDLKNQFGDKVQIVHLPKSGGVVVRSRETRRKVRDERLRSYFYGQQANLYPHSFEVKFSDVKLFKIGAPLVPDSCLPLGMDQGQNETKLVPVVPTKDLKHCLLAISAAESLEEDLVQTNVIGFLVVNEVDLDREVMVVLS 406
BLAST of Protein CLP1 homolog vs. Ensembl Nematostella
Match: EDO49720 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFH3]) HSP 1 Score: 44.669 bits (104), Expect = 6.896e-6 Identity = 29/74 (39.19%), Postives = 41/74 (55.41%), Query Frame = 2 Query: 101 INEFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYI 322 I E+ + L L N+ LI L++ AEE N A + V LI +I Q+ ++ LY+LD IIKNVG Y+ Sbjct: 9 IEEYASSLADLTFNSKPLINVLTMLAEE---NGQYAASIVKLIEKRIQTVAQQYRLPSLYLLDSIIKNVGGDYL 79
BLAST of Protein CLP1 homolog vs. Ensembl Medaka
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:101158455]) HSP 1 Score: 113.235 bits (282), Expect = 5.409e-26 Identity = 89/306 (29.08%), Postives = 146/306 (47.71%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKL----FKHELKADEVKIY 2677 V + L G AE++G+ L N + + + ++ GCS+ + G V K LY LN H LE R +A + + RGPR+++ GP ST+ R L NY+VR GR LV LD + +P ++S I+ D+ G+ PLV++FG +P N +LY + LA + RCE + +GGCIIN + + ++ F+V+V+L++ N L +P +V+++ +PK + R E+I YFY + F +E++ +V+IY Sbjct: 42 EQVELELLSGLAEVFGSELNRNKKYVFGPGSKIAVFTWQGCSVNLHGKPEVAYVSKDTPMLLY-----LNTHAALEQMRKQAERENERGPRVMVVGP--TDVGKSTVCRMLLNYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIERPADVEEGFSV-QAPLVYHFGSTTPGTNIKLYNKLTSCLAEMFSQRCEVNRKASVGGCIINTCGWVKGSGYQALVHCASTFQVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERSKECRRDTRDEKIREYFYGFRGVSYYPFSYEVRFSDVRIY 339
BLAST of Protein CLP1 homolog vs. Ensembl Medaka
Match: CLP1 (cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:101158455]) HSP 1 Score: 108.227 bits (269), Expect = 1.566e-24 Identity = 84/284 (29.58%), Postives = 135/284 (47.54%), Query Frame = 2 Query: 1787 NNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKV-KSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSF---HSSEIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFY 2623 V + L G AE++G+ L N + + + ++ GCS+ + G V K LY LN H LE R +A + + RGPR+++ GP ST+ R L NY+VR GR LV LD + +P ++S I+ D+ G+ PLV++FG +P N +LY + LA + RCE + +GGCIIN + + ++ F+V+V+L++ N L +P +V+++ +PK + R E+I YFY Sbjct: 42 EQVELELLSGLAEVFGSELNRNKKYVFGPGSKIAVFTWQGCSVNLHGKPEVAYVSKDTPMLLY-----LNTHAALEQMRKQAERENERGPRVMVVGP--TDVGKSTVCRMLLNYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIERPADVEEGFSV-QAPLVYHFGSTTPGTNIKLYNKLTSCLAEMFSQRCEVNRKASVGGCIINTCGWVKGSGYQALVHCASTFQVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERSKECRRDTRDEKIREYFY 317
BLAST of Protein CLP1 homolog vs. Ensembl Medaka
Match: pcf11 (PCF11 cleavage and polyadenylation factor subunit [Source:NCBI gene;Acc:101164244]) HSP 1 Score: 59.6918 bits (143), Expect = 1.809e-8 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLWRNDSLAFNTAIVNKSINKN 550 E+++ L L N+ I L++ AEE+ + A V +I +I +AP K+ LY++D I+KNVG Y+ F+K+L FI V +D + + +R +W+ FP L +D ++ +DP W L VN SI+ N Sbjct: 13 EYQSSLEDLTFNSKPHINMLTILAEENLQ---FAKDIVAIIEAQITKAPSSEKLPVLYLVDSIVKNVGGEYLAEFAKNLVTSFI-CVFEKVDENTRKSLFKLRSTWDEVFPTKKLYLLDVKVNSLDPAWPIKPLP---PTVNSSIHIN 153
BLAST of Protein CLP1 homolog vs. Ensembl Medaka
Match: pcf11 (PCF11 cleavage and polyadenylation factor subunit [Source:NCBI gene;Acc:101164244]) HSP 1 Score: 59.6918 bits (143), Expect = 1.818e-8 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLWRNDSLAFNTAIVNKSINKN 550 E+++ L L N+ I L++ AEE+ + A V +I +I +AP K+ LY++D I+KNVG Y+ F+K+L FI V +D + + +R +W+ FP L +D ++ +DP W L VN SI+ N Sbjct: 13 EYQSSLEDLTFNSKPHINMLTILAEENLQ---FAKDIVAIIEAQITKAPSSEKLPVLYLVDSIVKNVGGEYLAEFAKNLVTSFI-CVFEKVDENTRKSLFKLRSTWDEVFPTKKLYLLDVKVNSLDPAWPIKPLP---PTVNSSIHIN 153
BLAST of Protein CLP1 homolog vs. Planmine SMEST
Match: SMESG000020165.1 (SMESG000020165.1) HSP 1 Score: 1820.05 bits (4713), Expect = 0.000e+0 Identity = 939/951 (98.74%), Postives = 947/951 (99.58%), Query Frame = 2 Query: 80 MKYYLETINEFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLWRNDSLAFNTAIVNKSINKNNETLQSLPIVSSKLKSESYVYWKDNMCTPNIDCNKENVEIDFPSTNELLWKVDIPDYPLFPDIGTDPRLLRQWYTNEINQKIVINNTTHELLLNRIQPCIFLNETLHAVRFQCKNIQLFINGKLFDXXXXXXXXXXXXNQTFYVCLGGPWHEIVILGLPFHVPLDGQRHRIRFNNDNVFLQWLISSPIQIDLMPAIPSHIGEWGWRGMFGSPKYLNQRPLNPMKPPETFTRSRNSKINLKSNKFDNVKSCRTPLEMKRINSPQTNTKDSNNNSCEYSDNIKDNISLKLRQKLNQEAICQLYSSRLCLICSQTLNYADDMNFNLHMLQHSSCERHYQLLNDWIISDFVTDSTLNVHNCNTVVDYSDQIPKDRQLLKTISFDELINVEVTHALDSKSGNKIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSSEIILKAIQLFEVNVLLLISDSSTINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLFKHELKADEVKIYYTKSLNDSNDSNFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMTEREFWPELYSILVLNGIVLEKK 2932 MKYYLETINEFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDI+EKSKYYFIRKSWENHFPDDILND+DNALDKIDPLWRNDSLAFNT IVNKSINKNNETLQSLPIVSSKLKSESYVYWKDNMCTPNIDCNKENVEIDFPSTNELLWKVDIPDYPLFPDIGTDPRLLRQWYTNEINQKIVINNTTHELLLNRIQPCIFL+ETLHAVRFQCKNIQLFINGKLFDISISGAS+IQISNQTFYVCLGGPWHEIVILGLPFHVPLDGQRHRIRFNNDNVFLQWLISSPIQID+MPAIPSHIGEWGWRGMFGSPKYLNQRPLNPMKPPETFTRSRNSKINLKSNKFDNVKSCRTPLEMKRINSPQTNTKDSNNNSCEYSDNIK NISLKLRQKLNQEAICQLYSSRLC ICSQTLNY+DDMNFNLHMLQHSSCERHYQLLNDWIISDFVTDSTLNVHNCNTVVDYSDQIPKDRQLLKTISFDELINVEVTHAL+SKSGNKIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDL+RGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCENDNNLLIGGCIINGGSFHSSEIILKAIQLFEVNVLLLISDSSTINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLFKHELKADEVKIYYTKSLNDSNDSNFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVM EREFWPELYSILVLNGIVLEKK Sbjct: 1 MKYYLETINEFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIQEKSKYYFIRKSWENHFPDDILNDVDNALDKIDPLWRNDSLAFNTDIVNKSINKNNETLQSLPIVSSKLKSESYVYWKDNMCTPNIDCNKENVEIDFPSTNELLWKVDIPDYPLFPDIGTDPRLLRQWYTNEINQKIVINNTTHELLLNRIQPCIFLHETLHAVRFQCKNIQLFINGKLFDISISGASMIQISNQTFYVCLGGPWHEIVILGLPFHVPLDGQRHRIRFNNDNVFLQWLISSPIQIDVMPAIPSHIGEWGWRGMFGSPKYLNQRPLNPMKPPETFTRSRNSKINLKSNKFDNVKSCRTPLEMKRINSPQTNTKDSNNNSCEYSDNIKANISLKLRQKLNQEAICQLYSSRLCPICSQTLNYSDDMNFNLHMLQHSSCERHYQLLNDWIISDFVTDSTLNVHNCNTVVDYSDQIPKDRQLLKTISFDELINVEVTHALNSKSGNKIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLQRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCENDNNLLIGGCIINGGSFHSSEIILKAIQLFEVNVLLLISDSSTINLSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQHKLFKHELKADEVKIYYTKSLNDSNDSNFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMAEREFWPELYSILVLNGIVLEKK 951
BLAST of Protein CLP1 homolog vs. Planmine SMEST
Match: SMESG000047440.1 (SMESG000047440.1) HSP 1 Score: 182.185 bits (461), Expect = 1.834e-49 Identity = 139/409 (33.99%), Postives = 215/409 (52.57%), Query Frame = 2 Query: 1742 KIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS-----------EIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQ--HKLFKHELK--ADEV------KIYY------TKSLNDSNDS------NFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 ++ L +++++RF C + I+L +G+AE++GT L + L++ IL+F GC++ N D PN+ LN H LE R A ND+RGPR++I G E+ +TL R L+NY+ R R V L++ + ND LP SI ++ +++ GWD DPL+++FG SPV N +L+ QL+ LA VNIR END + GGCIIN S E I AI FEVN+L++I D N L +P+YV +I IPK + P++ + RT I +YF+ + HKL H+L A+ V KIY T +L ++D+ + +PF + N V A+S+AL DEI + ++++ V+ S++TV++ Sbjct: 9 EVKLKAQQMMRFECTSVTIIKLVEGSAELFGTELSTKGALNLQQGFLGTILTFNGCTLKYTSNTIIQFTVGFNEDQELPNVYLNFHAALEKIRNNA-NNDIRGPRLMICGN--ESVGKTTLCRILSNYAARKYRKVILIDANVGMNDICLPGSIGALIVTKPYEVVEGWDIFEDPLIYSFGHLSPVENLKLFSLQLNNLAELVNIRSENDPEVFAGGCIINMSGVSKSDDSGESQKKGIEAIRAAISAFEVNLLIIIEDGFLENLLRKDLPDYVSVIRIPKSSGAHSRTPEQWQKERTSNIASYFHGRGLHKLQPHKLTLLAENVVAFFQYKIYKIDLKKSTLALLPNDDTMEDEWCKLVEVPFSRSLSNRVLAVSEALDVDEIPGAACYGFVVVLSVAPDNSSITVLS 414
BLAST of Protein CLP1 homolog vs. Planmine SMEST
Match: SMESG000028257.1 (SMESG000028257.1) HSP 1 Score: 182.185 bits (461), Expect = 1.834e-49 Identity = 139/409 (33.99%), Postives = 215/409 (52.57%), Query Frame = 2 Query: 1742 KIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS-----------EIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQ--HKLFKHELK--ADEV------KIYY------TKSLNDSNDS------NFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 ++ L +++++RF C + I+L +G+AE++GT L + L++ IL+F GC++ N D PN+ LN H LE R A ND+RGPR++I G E+ +TL R L+NY+ R R V L++ + ND LP SI ++ +++ GWD DPL+++FG SPV N +L+ QL+ LA VNIR END + GGCIIN S E I AI FEVN+L++I D N L +P+YV +I IPK + P++ + RT I +YF+ + HKL H+L A+ V KIY T +L ++D+ + +PF + N V A+S+AL DEI + ++++ V+ S++TV++ Sbjct: 9 EVKLKAQQMMRFECTSVTIIKLVEGSAELFGTELSTKGALNLQQGFLGTILTFNGCTLKYTSNTIIQFTVGFNEDQELPNVYLNFHAALEKIRNNA-NNDIRGPRLMICGN--ESVGKTTLCRILSNYAARKYRKVILIDANVGMNDICLPGSIGALIVTKPYEVVEGWDIFEDPLIYSFGHLSPVENLKLFSLQLNNLAELVNIRSENDPEVFAGGCIINMSGVSKSDDSGESQKKGIEAIRAAISAFEVNLLIIIEDGFLENLLRKDLPDYVSVIRIPKSSGAHSRTPEQWQKERTSNIASYFHGRGLHKLQPHKLTLLAENVVAFFQYKIYKIDLKKSTLALLPNDDTMEDEWCKLVEVPFSRSLSNRVLAVSEALDVDEIPGAACYGFVVVLSVAPDNSSITVLS 414
BLAST of Protein CLP1 homolog vs. Planmine SMEST
Match: SMESG000047440.1 (SMESG000047440.1) HSP 1 Score: 182.956 bits (463), Expect = 7.455e-49 Identity = 139/409 (33.99%), Postives = 215/409 (52.57%), Query Frame = 2 Query: 1742 KIILNSEEIVRFFCLNNVRIRLYKGTAEIYGTALPFNHEIELRKNNHYEILSFTGCSIMVIGNINEVKVKSICFDLYKPNIILNIHYDLELKRIEALKNDVRGPRILIYGPGVEAFSMSTLTRTLANYSVRCGRTVALVNLDSIYNDTGLPNSISVNVIQVEFDLRRGWDFCNDPLVFNFGQCSPVANQRLYFEQLDALANYVNIRCEXXXXXXXXXXXXXXXSFHSS-----------EIILKAIQLFEVNVLLLISDSSTIN-LSSQVPEYVQIINIPKDLFDTNFCPKKIESIRTERIHAYFYEQ--HKLFKHELK--ADEV------KIYY------TKSLNDSNDS------NFINIPFQEIILNSVCALSQALSFDEISTSPILCYLLITDVSECYSTLTVMT 2866 ++ L +++++RF C + I+L +G+AE++GT L + L++ IL+F GC++ N D PN+ LN H LE R A ND+RGPR++I G E+ +TL R L+NY+ R R V L++ + ND LP SI ++ +++ GWD DPL+++FG SPV N +L+ QL+ LA VNIR END + GGCIIN S E I AI FEVN+L++I D N L +P+YV +I IPK + P++ + RT I +YF+ + HKL H+L A+ V KIY T +L ++D+ + +PF + N V A+S+AL DEI + ++++ V+ S++TV++ Sbjct: 9 EVKLKAQQMMRFECTSVTIIKLVEGSAELFGTELSTKGALNLQQGFLGTILTFNGCTLKYTSNTIIQFTVGFNEDQELPNVYLNFHAALEKIRNNA-NNDIRGPRLMICGN--ESVGKTTLCRILSNYAARKYRKVILIDANVGMNDICLPGSIGALIVTKPYEVVEGWDIFEDPLIYSFGHLSPVENLKLFSLQLNNLAELVNIRSENDPEVFAGGCIINMSGVSKSDDSGESQKKGIEAIRAAISAFEVNLLIIIEDGFLENLLRKDLPDYVSVIRIPKSSGAHSRTPEQWQKERTSNIASYFHGRGLHKLQPHKLTLLAENVVAFFQYKIYKIDLKKSTLALLPNDDTMEDEWCKLVEVPFSRSLSNRVLAVSEALDVDEIPGAACYGFVVVLSVAPDNSSITVLS 414
BLAST of Protein CLP1 homolog vs. Planmine SMEST
Match: SMESG000059830.1 (SMESG000059830.1) HSP 1 Score: 162.54 bits (410), Expect = 7.810e-42 Identity = 85/190 (44.74%), Postives = 123/190 (64.74%), Query Frame = 2 Query: 653 KENVEIDFPSTNELLWKVDIPDYPLFPDIGTDPRLLRQWYTNEINQKIVINNTTHELLLNRIQPCIFLNETLHAVRFQCKNIQLFINGKLFDXXXXXXXXXXXXNQTFYVCLGGPWHEIVILGLPFHVPLDGQRHRIRFNNDNVFLQWLISSPIQIDLMPAIPSHIGEWGWRGMFGSPKYLNQRPLNPMK 1222 K +++ P E WKV I P P IGTDPRLL + + ++ I I+ H L L+RIQPCIF+N LHAVRF C NI++ I+ F+IS +G + I+I+ + + CLGGP HE++I G P++V +DG H+I + V +Q+L+ IQ+++M AIP +I EW +G FGSP+YLN PLNP++ Sbjct: 295 KVSIQASLPQPREPTWKVKIDGLPQMPPIGTDPRLLARCPFYDPSRTITIDGIKHTLHLDRIQPCIFVNNELHAVRFYCPNIEVNIDNMPFEISPNGLAHIKINRRFYIACLGGPGHELIINGWPYNVRIDGNMHQISVSGYPVSVQFLVQRSIQVNVMNAIPPYICEWAVKGYFGSPQYLNIPPLNPLR 484 HSP 2 Score: 62.3882 bits (150), Expect = 1.144e-9 Identity = 39/129 (30.23%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 107 EFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLITTKIIEAPQKLKIYFLYVLDCIIKNVGYLYIKLFSKSLKEVFIFSVSSVIDIREKSKYYFIRKSWENHFPXXXXXXXXXXXXXXXPLW 493 +F L L +N+ +I LS+ A ++N ++ L ++I + +LK+ YV+D IIKNVG Y ++F+ + + FI + S D + + K Y +R +W+++F +++N +D + K DP W Sbjct: 9 DFSRTLKTLTTNDKYIINTLSVMAMNARDNPSLSKEIAKLAMSQIFKVVPQLKLTNFYVVDSIIKNVGSPYKEMFADKVLDAFIHTFQSNKDHKIRIKLYNLRLTWKDYFSSELMNRLDEEVKKYDPAW 137 The following BLAST results are available for this feature:
BLAST of Protein CLP1 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protein CLP1 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Protein CLP1 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protein CLP1 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of Protein CLP1 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of Protein CLP1 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Protein CLP1 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protein CLP1 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protein CLP1 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 3
BLAST of Protein CLP1 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Protein CLP1 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protein CLP1 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Protein CLP1 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of Protein CLP1 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012699 ID=SMED30012699|Name=Protein CLP1 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=3052bpback to top protein sequence of SMED30012699-orf-1 >SMED30012699-orf-1 ID=SMED30012699-orf-1|Name=SMED30012699-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=952bp MKYYLETINEFETILNCLDSNNNNLIRALSLFAEEHKENDIIAPAFVNLIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|