HTH CENPB-type domain-containing protein

Overview
NameHTH CENPB-type domain-containing protein
Smed IDSMED30012597
Length (bp)718
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30012597

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
enteric muscle cellSMED30012597 dd_Smed_v4_30227_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD1 (tigger transposable element derived 1 [Source:HGNC Symbol;Acc:HGNC:14523])

HSP 1 Score: 90.8929 bits (224), Expect = 5.410e-21
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQ 299
            LP+ ++ N KA MT  L   W +    P ++ YC+++ + FK L+L+ NA  H   + E+ E +  +F+P NTTS+L+P DQG+I+TFK+YYL+  F 
Sbjct:  255 LPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFH 352

HSP 2 Score: 29.261 bits (64), Expect = 5.410e-21
Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD 469
            WK F+I+D +K +  +    +K STL   WK + P  + D
Sbjct:  375 WKGFTILDAIKNIRDS-WEEVKLSTLTGVWKKLIPTLIDD 413
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200])

HSP 1 Score: 65.855 bits (159), Expect = 1.012e-12
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGH-QVNVDELSENVKFV-FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AWM  S+ + W     +P+++ Y   + L  KA++L+ N+  H   NV    +   F  +LPPN  SL++P DQG+IAT K  Y
Sbjct:  245 LPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNY 338

HSP 2 Score: 26.1794 bits (56), Expect = 1.012e-12
Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 454
            WKK +++D +  + +A  + +KP T++  WK + P
Sbjct:  357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKKILP 390
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333])

HSP 1 Score: 56.9954 bits (136), Expect = 6.493e-9
Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFV---FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AW+ +S+ + W     +P+++ +   + L  KA++L+ +    + N + LS +   +   +LPPN TSL++P  QG++AT K YY
Sbjct:  245 LPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLL-DFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYY 338
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333])

HSP 1 Score: 56.9954 bits (136), Expect = 6.493e-9
Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFV---FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AW+ +S+ + W     +P+++ +   + L  KA++L+ +    + N + LS +   +   +LPPN TSL++P  QG++AT K YY
Sbjct:  245 LPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLL-DFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYY 338
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD7 (tigger transposable element derived 7 [Source:HGNC Symbol;Acc:HGNC:18331])

HSP 1 Score: 51.9878 bits (123), Expect = 3.651e-7
Identity = 27/98 (27.55%), Postives = 52/98 (53.06%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAY----CNKENLNFKALVLVGNAAGHQVNVDELSEN--VKFVFLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ ++ +K  W T  L   W     +PE++ +        + + +AL+L+ +   H  +    SE+  +K +F P NT++L++P +QG+I + K  Y
Sbjct:  245 LPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLY 342
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: kif6 (kinesin family member 6 [Source:Xenbase;Acc:XB-GENE-1014042])

HSP 1 Score: 63.1586 bits (152), Expect = 6.453e-11
Identity = 37/123 (30.08%), Postives = 63/123 (51.22%), Query Frame = 3 
Query:    3 LLPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENL--NFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYIRMN*KMTEQ*QLLMLGRSFQ 365
            + P+ + ANK+A +T  + Q+W     +PE +A+C    L  + K ++++ +   H      + +NV  V LPP+ TS ++P DQGI+  FK+ Y  +  Q      +M  +    M G  FQ
Sbjct:  419 VFPVTYTANKQAGITREIFQDWFENHFVPEARAHCMSVGLSQDAKVMLILDHCPTHPSAEFLVKDNVFAVCLPPDCTSFIQPLDQGILRLFKSNYKSEFLQ------RMLTECNKGMAGAQFQ 535
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: apmapl (adipocyte plasma membrane associated protein LIKE [Source:Xenbase;Acc:XB-GENE-5754317])

HSP 1 Score: 53.5286 bits (127), Expect = 8.426e-8
Identity = 27/102 (26.47%), Postives = 52/102 (50.98%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGH--QVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
             P  +  ++ AW+T+ L + W     +P +K Y  +  L  KA++LV    G   + ++     N++ +FL   T S +   DQG+I++FK  Y ++  + +
Sbjct:  212 FPAVYHYSRNAWVTQELLREWFLEEFVPAVKRYLKRCCLQQKAVLLVNQCPGKPPEEDLQTADGNIRVLFLSKTTRSKIPSMDQGVISSFKQLYRRELLKLM 313
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Jrkl (Jrk-like [Source:MGI Symbol;Acc:MGI:1924782])

HSP 1 Score: 60.077 bits (144), Expect = 3.001e-11
Identity = 32/94 (34.04%), Postives = 51/94 (54.26%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGH-QVNVDELSENVKFV-FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AWM  S+ + W     +P+++ Y   + L  KA++L+ N+  H   NV    +   F  +LPPN  SL++P  QG+IA  K  Y
Sbjct:  245 LPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPLGQGVIAAMKRNY 338

HSP 2 Score: 26.5646 bits (57), Expect = 3.001e-11
Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 454
            WKK +++D +  + +A  + +KP T++  WK + P
Sbjct:  357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKQILP 390
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Tigd2 (tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390])

HSP 1 Score: 60.4622 bits (145), Expect = 3.147e-10
Identity = 29/94 (30.85%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFV--FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AW+  S+ + W     +P+++ +   + L  KA++L+   A H       S++ + +  +LPPN TSL++P  QG++ T K YY
Sbjct:  245 LPVTYFSQKSAWIEPSVLKQWFEKCFVPQVQKHLKSKGLREKAVLLLDFPAAHPAEELLSSDDGRIIVKYLPPNVTSLIQPMSQGVLTTVKRYY 338
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Jrk (jerky [Source:MGI Symbol;Acc:MGI:106214])

HSP 1 Score: 57.3806 bits (137), Expect = 3.892e-9
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENL--NFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYL 284
            LPI ++A   AW+ + +  +W     +P ++ +     L  + KA++L+ ++  H    + +SENV  +FLP + TSLL+P +QGI   F   ++
Sbjct:  250 LPIAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAILLLDHSRAHSQESELVSENVFTIFLPSSVTSLLQPTEQGIRRAFMRLFI 344
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96MW7|TIGD1_HUMAN (Tigger transposable element-derived protein 1 OS=Homo sapiens OX=9606 GN=TIGD1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.266e-20
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQ 299
            LP+ ++ N KA MT  L   W +    P ++ YC+++ + FK L+L+ NA  H   + E+ E +  +F+P NTTS+L+P DQG+I+TFK+YYL+  F 
Sbjct:  255 LPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFH 352

HSP 2 Score: 29.261 bits (64), Expect = 2.266e-20
Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD 469
            WK F+I+D +K +  +    +K STL   WK + P  + D
Sbjct:  375 WKGFTILDAIKNIRDS-WEEVKLSTLTGVWKKLIPTLIDD 413
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9Y4A0|JERKL_HUMAN (Jerky protein homolog-like OS=Homo sapiens OX=9606 GN=JRKL PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 4.242e-12
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGH-QVNVDELSENVKFV-FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AWM  S+ + W     +P+++ Y   + L  KA++L+ N+  H   NV    +   F  +LPPN  SL++P DQG+IAT K  Y
Sbjct:  245 LPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNY 338

HSP 2 Score: 26.1794 bits (56), Expect = 4.242e-12
Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 454
            WKK +++D +  + +A  + +KP T++  WK + P
Sbjct:  357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKKILP 390
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|B2RRL2|JERKL_MOUSE (Jerky protein homolog-like OS=Mus musculus OX=10090 GN=Jrkl PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.728e-10
Identity = 32/94 (34.04%), Postives = 51/94 (54.26%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGH-QVNVDELSENVKFV-FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AWM  S+ + W     +P+++ Y   + L  KA++L+ N+  H   NV    +   F  +LPPN  SL++P  QG+IA  K  Y
Sbjct:  245 LPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPLGQGVIAAMKRNY 338

HSP 2 Score: 26.5646 bits (57), Expect = 1.728e-10
Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 454
            WKK +++D +  + +A  + +KP T++  WK + P
Sbjct:  357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKQILP 390
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q0VBL1|TIGD2_MOUSE (Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.201e-9
Identity = 29/94 (30.85%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFV--FLPPNTTSLLRPQDQGIIATFKTYY 281
            LP+ + + K AW+  S+ + W     +P+++ +   + L  KA++L+   A H       S++ + +  +LPPN TSL++P  QG++ T K YY
Sbjct:  245 LPVTYFSQKSAWIEPSVLKQWFEKCFVPQVQKHLKSKGLREKAVLLLDFPAAHPAEELLSSDDGRIIVKYLPPNVTSLIQPMSQGVLTTVKRYY 338
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q60976|JERKY_MOUSE (Jerky protein OS=Mus musculus OX=10090 GN=Jrk PE=2 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 2.722e-8
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENL--NFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYL 284
            LPI ++A   AW+ + +  +W     +P ++ +     L  + KA++L+ ++  H    + +SENV  +FLP + TSLL+P +QGI   F   ++
Sbjct:  250 LPIAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAILLLDHSRAHSQESELVSENVFTIFLPSSVTSLLQPTEQGIRRAFMRLFI 344
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A0A1XAN0 (Tigger transposable element-derived protein 1 (Fragment) OS=Zeugodacus cucurbitae OX=28588 GN=TIGD1_1 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.622e-40
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 2 
Query:  284 KTSISIY*NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPVISNESLMEVALE 631
            ++S      +L N    +VID WK+FSIMDC+  V IA +  LKPSTLN+CWK +WPECVK  + V+  + E ++II ++NA+GG  F+DL+  D+EE+++D  +S   ++E  LE
Sbjct:   76 RSSFHYVVEKLDNYEESSVIDEWKQFSIMDCINQVKIA-LDLLKPSTLNSCWKNIWPECVKCKDPVIDNNAELADIITMANAIGGDGFDDLSLADVEELLVDESLSENEIIEFTLE 190

HSP 2 Score: 88.5817 bits (218), Expect = 3.622e-40
Identity = 42/100 (42.00%), Postives = 55/100 (55.00%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            LP+HW ANKKAW+T ++   W     IPE++ Y  +                            KF FLPPNTTSL++P DQGIIATFKTYY++ +F Y+
Sbjct:   11 LPVHWMANKKAWVTSAIFTEWFQKHFIPEVRRYMKE----------------------------KFCFLPPNTTSLIQPLDQGIIATFKTYYIRSSFHYV 82
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A0A1WXV2 (Tigger transposable element-derived protein 1 (Fragment) OS=Zeugodacus cucurbitae OX=28588 GN=TIGD1_3 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.846e-36
Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            LP+HW ANKKAW+T SL ++W     +PE++ Y   + L FK L+++ N  GH    D   +NVK +FLPPNTTSL++P DQGIIATFK YY+K +FQ+I
Sbjct:  143 LPVHWMANKKAWVTASLFKDWFLNHFVPEVREYLRSKQLVFKVLLVIDNTPGHP---DISHKNVKIMFLPPNTTSLIQPLDQGIIATFKRYYVKNSFQHI 239

HSP 2 Score: 66.2402 bits (160), Expect = 1.846e-36
Identity = 35/106 (33.02%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  308 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPEC--VKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPVISNESLME 619
            NE++ +  + VI AWK F + +C+  ++ +V   +  +TLN CWK +W +   +   N  L   +EY++I  +S+A+GG  F D+  EDI E+  + VIS++ +++
Sbjct:  241 NEIETNNEMNVISAWKTFDLKNCIDCISCSV-REITKTTLNRCWKNLWADVAVMDTENETL---SEYADIFQVSHAIGGEGFHDITIEDINELFENVVISDDEILQ 342
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A034WG25 (Tigger transposable element-derived protein 1 OS=Bactrocera dorsalis OX=27457 GN=TIGD1 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.262e-35
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            LP+HW ANKKAW+T SL + W     +PE++ Y   +NL FK L+L+ NA GH V       NVK +FLPPNTTSLL+P DQGIIA  KTYY+K +F++I
Sbjct:    6 LPVHWMANKKAWVTASLFKEWFEKCFVPEVRGYMISKNLEFKVLLLIDNAPGHPVIE---HPNVKVLFLPPNTTSLLQPLDQGIIAALKTYYIKHSFRFI 102

HSP 2 Score: 61.2326 bits (147), Expect = 3.262e-35
Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 2 
Query:  284 KTSISIY*NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVI 583
            K S     N+L+++ AI VI AWK F++ +C+  + IAV   +  +TL+ CWK +W + V            Y+ I  L+ ++GG  F+D+  +DI E+ 
Sbjct:   96 KHSFRFILNKLESNSAINVISAWKDFNVKNCIDCIKIAV-KDITKTTLSKCWKNLWQDVVLQEESDNEGLVTYAEIFELAKSIGGEGFDDMDIDDINELF 194
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A034WGK8 (Tigger transposable element-derived protein 1 OS=Bactrocera dorsalis OX=27457 GN=TIGD1 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.175e-35
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            LP+HW ANKKAW+T SL + W     +PE++ Y   +NL FK L+L+ NA GH V       NVK +FLPPNTTSLL+P DQGIIA  KTYY+K +F++I
Sbjct:  252 LPVHWMANKKAWVTASLFKEWFEKCFVPEVRGYMISKNLEFKVLLLIDNAPGHPVIE---HPNVKVLFLPPNTTSLLQPLDQGIIAALKTYYIKHSFRFI 348

HSP 2 Score: 61.2326 bits (147), Expect = 4.175e-35
Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 2 
Query:  284 KTSISIY*NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVI 583
            K S     N+L+++ AI VI AWK F++ +C+  + IAV   +  +TL+ CWK +W + V            Y+ I  L+ ++GG  F+D+  +DI E+ 
Sbjct:  342 KHSFRFILNKLESNSAINVISAWKDFNVKNCIDCIKIAV-KDITKTTLSKCWKNLWQDVVLQEESDNEGLVTYAEIFELAKSIGGEGFDDMDIDDINELF 440
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A401T1F0 (HTH CENPB-type domain-containing protein OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0014986 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.018e-34
Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 3 
Query:    9 PIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            P+ WR+NKKAWMT +L Q W S  AIP  + YC +ENL+FK L+L+ N  GH +N+D+LSENVK +FLPPNT SLL+P  QG +ATFK YYL++ F  +
Sbjct:  589 PVIWRSNKKAWMTGALFQEWFSVYAIPAWREYCARENLSFKILLLLDNCPGHPINLDDLSENVKVIFLPPNTASLLQPMVQGAVATFKAYYLRRTFSQL 687

HSP 2 Score: 45.0542 bits (105), Expect = 3.018e-34
Identity = 35/111 (31.53%), Postives = 60/111 (54.05%), Query Frame = 2 
Query:  311 ELKNDRAITVIDAWKKFSIMDCVKFVNIA-VIHGLKPSTLNACWKAVWPECVKDN----NCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILD--PVISNESLMEV 622
            E   + A +V + W+ ++I++ +   NIA   + +  S LN+ W+ +WPECV D     + V  I  E   II L+ AVG   F+++   D+ E++      +SNE LM++
Sbjct:  690 ETDGENAPSVREFWRGYNILEGIN--NIADSWNEVTSSCLNSVWRKLWPECVSDKGGSPDTVPEIQRE---IIALARAVG---FDEVDETDVVELLESHGEELSNEDLMQL 792
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006798.1 (pep scaffold:Pmarinus_7.0:GL478691:31611:33359:1 gene:ENSPMAG00000006139.1 transcript:ENSPMAT00000006798.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 103.605 bits (257), Expect = 6.093e-34
Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = 3 
Query:    3 LLPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQ-GIIATFKTYYLKQAFQYI 305
            +LP+HW ANK AWMT  + ++W +   + E + YC KENL FK L+++ NA G+  ++  ++ NV+ + LPPNT SLL+P DQ G+++TFK YYL++    +
Sbjct:  189 MLPVHWTANKMAWMTGQIMEDWFTQHFLVESERYCRKENLAFKVLLILDNAPGYPKHLANINPNVRVLLLPPNTASLLQPLDQGGVVSTFKAYYLRRTISQL 290

HSP 2 Score: 56.9954 bits (136), Expect = 6.093e-34
Identity = 28/83 (33.73%), Postives = 47/83 (56.63%), Query Frame = 2 
Query:  335 TVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVI 583
            TV D WK ++I D +  +  +    +K ST+N  W A+W ECV   NC   +ST   ++++L   +GG  F D+  +D+ E++
Sbjct:  301 TVRDCWKAYNIRDAINNIK-SSWDDVKQSTMNCAWNAIWKECVIYLNCFPEMSTAVQDVVDLGRELGGEGFSDMREDDVLELL 382
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003106.1 (pep scaffold:Pmarinus_7.0:GL476998:37517:41189:1 gene:ENSPMAG00000002845.1 transcript:ENSPMAT00000003106.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 103.219 bits (256), Expect = 7.825e-28
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAF 296
            LP+ W++N KA +T ++ + W     +P +K YC   NL FKA++++ NA  H V+V+    N+K VFL PNTT+LL+P DQG++++FK YYL+Q F
Sbjct:  195 LPVIWKSNPKARVTGAIFEEWFRVYFVPAVKEYCRTNNLAFKAILVLDNAPCHPVSVEGFDPNIKVVFLTPNTTALLQPMDQGVMSSFKAYYLRQTF 291

HSP 2 Score: 36.965 bits (84), Expect = 7.825e-28
Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 2 
Query:  335 TVIDAWKKFSIMDCVKFVNIAVI-HGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPV--ISNESLMEV 622
            T+ + WK FSI+D VK  NIA     +K S LN  W+ + PE V  +N      T      N+    G ++ E +A ED+ E++      +SNE L+++
Sbjct:  305 TLTEFWKGFSILDAVK--NIAASWKEMKQSNLNGVWRKLCPEFV--SNFQGFTDTVEEVTENVVEMAGQLQLE-VAPEDVGELLASHAHELSNEDLLQL 398
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003283.1 (pep scaffold:Pmarinus_7.0:GL479064:1419:3178:1 gene:ENSPMAG00000003000.1 transcript:ENSPMAT00000003283.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 102.834 bits (255), Expect = 1.569e-25
Identity = 44/100 (44.00%), Postives = 69/100 (69.00%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            L +H+R++K+ WMT+ +  ++V      E++ YC ++N +FK L++V NA  H   + +LSE +K VFLPP+TTSLL+P  QG+IA FK YYL++ F  +
Sbjct:  226 LGVHFRSSKRGWMTDQMFTDYVLETLQDELRRYCKRKNQDFKILLVVDNAPSHPPYIVDLSEQIKVVFLPPHTTSLLQPMGQGVIAAFKAYYLRRTFAML 325
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005921.1 (pep scaffold:Pmarinus_7.0:GL487978:976:2666:1 gene:ENSPMAG00000005352.1 transcript:ENSPMAT00000005921.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-24
Identity = 41/95 (43.16%), Postives = 65/95 (68.42%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQ 290
            LP+++RAN  AW+T ++ ++W     IP+++ YC  E + FK L+++ NA  H  ++D+   N+K VFLPPN TS+L+P DQG+ A  K YYL++
Sbjct:  202 LPVYFRANPTAWVTVAIFEDWFINCFIPDVEKYCRDEGIPFKILLVIDNAPSHPAHLDDFHPNIKVVFLPPNATSVLQPMDQGVNAKCKAYYLRR 296
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000018.1 (pep scaffold:Pmarinus_7.0:GL482463:8529:10142:1 gene:ENSPMAG00000000016.1 transcript:ENSPMAT00000000018.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 91.2781 bits (225), Expect = 3.453e-24
Identity = 41/95 (43.16%), Postives = 66/95 (69.47%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQ 290
            LP+ WRANK+A +T ++ Q+W ++   P ++ +C +  L  KAL+++ +A  H  N+D+L+ENV+ VFLPPN TS L+P  + + AT K YYL++
Sbjct:  177 LPVIWRANKEARVTTAVFQDWFTSCFCPFVRDHCARNKLENKALLVLDSAPEHPANLDDLAENVRVVFLPPNATSPLQPVGRVVTATLKAYYLRR 271

HSP 2 Score: 36.5798 bits (83), Expect = 3.453e-24
Identity = 20/78 (25.64%), Postives = 35/78 (44.87%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTE-YSNIINLSNAVGGIEFEDLAFEDIEEV 580
            W+ + I   V  V  A    + P+ +N  W+ +WPECV  +        E    I+ L+   G   F+ +   D++E+
Sbjct:  292 WRGYDIRKAVDNVG-AAWREVTPAHMNGAWRQIWPECVDGSTGFAKTVPEIRREIVGLARRAG---FDGVDEGDVQEL 365
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Match: EDO44738 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUQ6])

HSP 1 Score: 46.9802 bits (110), Expect = 2.930e-6
Identity = 32/100 (32.00%), Postives = 54/100 (54.00%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELSENVKFVFL---PPNTTSLLRPQDQGIIATFKTYYLKQAF 296
            LP+ WRAN++AW+T S+  +W+ T      +    K+    + L+ + N+  H   + +L+ NVK VFL     NT + L+P  QGI+  F+  Y ++  
Sbjct:  228 LPVIWRANRRAWITTSIFADWLRTLD----RKMRQKDR---RILLFLDNSPPHPPTL-QLT-NVKLVFLIKPSNNTVNQLQPLTQGIVEAFRMAYRRKVL 318
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000036785.1 (pep primary_assembly:ASM223467v1:22:11796267:11802170:-1 gene:ENSORLG00000024024.1 transcript:ENSORLT00000036785.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 100.138 bits (248), Expect = 4.719e-29
Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELS-ENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            LP++W  N  AWMT++L+ NW     IPE+K Y  ++ L+FK L+L+ NA G     D+LS + V+  FLPPNT+SL++P DQGII TFK  Y +   Q++
Sbjct:  221 LPVYWMHNTMAWMTKALNLNWFKGCFIPEVKGYLTEKGLDFKVLLLIDNAGGF---ADDLSHDGVQIEFLPPNTSSLIQPMDQGIIRTFKALYTRNTLQHL 318

HSP 2 Score: 46.595 bits (109), Expect = 4.719e-29
Identity = 26/114 (22.81%), Postives = 56/114 (49.12%), Query Frame = 2 
Query:  314 LKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNI--------INLSNAVGGIEFEDLAFEDIEEVI--LDPVISNESLMEVA 625
            + +D+  +  D W++++I  C++ +  A    +K  TLN CW+ +WPE V +     P  +    I        ++L+  + G  F+++  +D+  +I      +++E L E+ 
Sbjct:  322 MDSDQNFSFKDYWREYTIASCLQHIQRAH-QEMKSETLNGCWEKLWPEAVHN-----PTESRLDEIHRSVVETAVSLAKRLRGDGFDEITSDDVNSLIDAHSQPLTDEDLAEMT 429
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000031980.1 (pep primary_assembly:ASM223467v1:3:6881985:6888319:-1 gene:ENSORLG00000025652.1 transcript:ENSORLT00000031980.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 94.3597 bits (233), Expect = 2.100e-27
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 3 
Query:    6 LPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGNAAGHQVNVDELS-ENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
            L + W  N KAWMT++L+ +W     IP++K Y   + L+FK L+LV NA GH    D+L+ + V+  FLPPNTTSL++P DQGII  FK  Y +   Q++
Sbjct:  182 LHVCWMYNAKAWMTKALNLDWFKNCFIPQVKCYLRGKGLDFKVLLLVDNAGGH---ADDLAYDCVQIKFLPPNTTSLIQPMDQGIIRAFKALYTRNTLQHL 279

HSP 2 Score: 46.595 bits (109), Expect = 2.100e-27
Identity = 19/54 (35.19%), Postives = 35/54 (64.81%), Query Frame = 2 
Query:  308 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD 469
            + + +D+  ++ D W+ ++I  C++ +  A I  +K  TLNACWK +WPE V++
Sbjct:  281 DAMDSDQDSSLKDYWRGYTIASCLQNIQRA-IQEMKTETLNACWKKLWPEAVQN 333
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000058229.1 (SMESG000058229.1)

HSP 1 Score: 196.438 bits (498), Expect = 2.969e-59
Identity = 98/133 (73.68%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:  242 TRSRYNCHV*NLLFKTSISIY*NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPVISNESLMEVALEGTD 640
            + +RYNCHV     K +     +EL+NDR I VIDAWKKFSIMDC+K +NIAV    +PSTLNACWKAVWPEC+KDNNCVLP+STEYSNIINLSNAV GI FEDLAFEDIEEVILD  IS ESL+EVALEGTD
Sbjct:   83 SANRYNCHVKTYYLKQAFQYILDELENDRTIIVIDAWKKFSIMDCLKLLNIAV---HEPSTLNACWKAVWPECIKDNNCVLPLSTEYSNIINLSNAVRGIGFEDLAFEDIEEVILDLFISEESLIEVALEGTD 212
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000058229.1 (SMESG000058229.1)

HSP 1 Score: 177.563 bits (449), Expect = 2.696e-52
Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 2 
Query:  308 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPVISNESLMEVALEGTD 640
            N    +R I VIDAWKKFSIMDC+K +NIAV    +PSTLNACWKAVWPEC+KDNNCVLP+STEYSNIINLSNAV GI FEDLAFEDIEEVILD  IS ESL+EVALEGTD
Sbjct:   80 NSFSANRTIIVIDAWKKFSIMDCLKLLNIAV---HEPSTLNACWKAVWPECIKDNNCVLPLSTEYSNIINLSNAVRGIGFEDLAFEDIEEVILDLFISEESLIEVALEGTD 187
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000032104.1 (SMESG000032104.1)

HSP 1 Score: 103.219 bits (256), Expect = 1.714e-26
Identity = 48/117 (41.03%), Postives = 76/117 (64.96%), Query Frame = 2 
Query:  308 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPVISNESLMEVALEGTDLQFFYK 658
            +E+ +D ++TV   WK F+I+DCVK V +AV   L+PSTLN  WK +WPE V  NN + P+  EY  I++L++++GG  FEDLA +D++E +++P +  E     +L+   +Q   K
Sbjct:  133 DEMDSDSSLTVSQVWKNFTILDCVKIVALAV-EELRPSTLNGSWKPIWPEVVLLNNRIQPVVDEYRAIVDLAHSLGGEGFEDLAIQDVKEFLVEPNLGEEEKRTKSLDLMTIQIMQK 248
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000034930.1 (SMESG000034930.1)

HSP 1 Score: 100.138 bits (248), Expect = 7.183e-24
Identity = 48/105 (45.71%), Postives = 75/105 (71.43%), Query Frame = 2 
Query:  308 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDN-NCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEVILDPVISNESLME 619
            ++L+ND ++ +IDAWKKF+I+D V+ + I+    +K STL+ACWKAVWP+ V +N N  + +  EYS+II L++ +GG  F+DLA  DI EV+ D  ++ + L+E
Sbjct: 1006 HKLENDGSLLIIDAWKKFTILDSVRHIGISY-RKIKKSTLHACWKAVWPDVVDENINLTVSLGQEYSDIIELAHTIGGEGFDDLAQRDINEVMEDQELNEDDLIE 1109
[Close]
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000057528.1 (SMESG000057528.1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.363e-22
Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 2 
Query:  350 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIEFEDLAFEDIEEV 580
            WKKF+I+DC+  V  A I+ ++P TLN CWKA+WPECV  N  +  IS E   II L++  GG  FE     DIEE+
Sbjct:  162 WKKFTILDCINHVANA-INQIRPMTLNLCWKAIWPECVTGNGTIAEISDE---IIALAHLFGGEGFETFNQNDIEEL 234

HSP 2 Score: 51.2174 bits (121), Expect = 1.363e-22
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 3 
Query:   36 AWMTESLSQNWVSTRAIPEIKAYCNKENLNF-KALVLVGNAAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 305
             W++  L +N      I    A  N+E   F + ++ +    G+  N        + +F+PPN TSL++P DQGIIA FK YY+K  ++ I
Sbjct:   66 GWLSGFLKRNAFHNLKIRVDVASTNQEAKKFPEKMIKIIEDGGYCSN--------QILFIPPNMTSLIQPLDQGIIAPFKKYYIKSTYESI 148
The following BLAST results are available for this feature:
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TIGD15.410e-2140.82tigger transposable element derived 1 [Source:HGNC... [more]
JRKL1.012e-1236.17JRK like [Source:HGNC Symbol;Acc:HGNC:6200][more]
TIGD26.493e-931.58tigger transposable element derived 2 [Source:HGNC... [more]
TIGD26.493e-931.58tigger transposable element derived 2 [Source:HGNC... [more]
TIGD73.651e-727.55tigger transposable element derived 7 [Source:HGNC... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
kif66.453e-1130.08kinesin family member 6 [Source:Xenbase;Acc:XB-GEN... [more]
apmapl8.426e-826.47adipocyte plasma membrane associated protein LIKE ... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Jrkl3.001e-1134.04Jrk-like [Source:MGI Symbol;Acc:MGI:1924782][more]
Tigd23.147e-1030.85tigger transposable element derived 2 [Source:MGI ... [more]
Jrk3.892e-930.53jerky [Source:MGI Symbol;Acc:MGI:106214][more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q96MW7|TIGD1_HUMAN2.266e-2040.82Tigger transposable element-derived protein 1 OS=H... [more]
sp|Q9Y4A0|JERKL_HUMAN4.242e-1236.17Jerky protein homolog-like OS=Homo sapiens OX=9606... [more]
sp|B2RRL2|JERKL_MOUSE1.728e-1034.04Jerky protein homolog-like OS=Mus musculus OX=1009... [more]
sp|Q0VBL1|TIGD2_MOUSE2.201e-930.85Tigger transposable element-derived protein 2 OS=M... [more]
sp|Q60976|JERKY_MOUSE2.722e-830.53Jerky protein OS=Mus musculus OX=10090 GN=Jrk PE=2... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0A1XAN03.622e-4044.83Tigger transposable element-derived protein 1 (Fra... [more]
A0A0A1WXV21.846e-3653.00Tigger transposable element-derived protein 1 (Fra... [more]
A0A034WG253.262e-3555.00Tigger transposable element-derived protein 1 OS=B... [more]
A0A034WGK84.175e-3555.00Tigger transposable element-derived protein 1 OS=B... [more]
A0A401T1F03.018e-3457.58HTH CENPB-type domain-containing protein OS=Chilos... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000006798.16.093e-3444.12pep scaffold:Pmarinus_7.0:GL478691:31611:33359:1 g... [more]
ENSPMAT00000003106.17.825e-2845.36pep scaffold:Pmarinus_7.0:GL476998:37517:41189:1 g... [more]
ENSPMAT00000003283.11.569e-2544.00pep scaffold:Pmarinus_7.0:GL479064:1419:3178:1 gen... [more]
ENSPMAT00000005921.12.620e-2443.16pep scaffold:Pmarinus_7.0:GL487978:976:2666:1 gene... [more]
ENSPMAT00000000018.13.453e-2443.16pep scaffold:Pmarinus_7.0:GL482463:8529:10142:1 ge... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO447382.930e-632.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSORLT00000036785.14.719e-2946.53pep primary_assembly:ASM223467v1:22:11796267:11802... [more]
ENSORLT00000031980.12.100e-2745.54pep primary_assembly:ASM223467v1:3:6881985:6888319... [more]
back to top
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000058229.12.969e-5973.68SMESG000058229.1[more]
SMESG000058229.12.696e-5279.28SMESG000058229.1[more]
SMESG000032104.11.714e-2641.03SMESG000032104.1[more]
SMESG000034930.17.183e-2445.71SMESG000034930.1[more]
SMESG000057528.11.363e-2249.35SMESG000057528.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30012597 ID=SMED30012597|Name=HTH CENPB-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=718bp
ATCTGCTTCCCATCCACTGGCGAGCAAACAAAAAAGCATGGATGACGGAA
TCATTATCTCAAAACTGGGTTTCAACTCGTGCTATTCCAGAAATTAAAGC
TTATTGCAACAAGGAAAACTTAAACTTCAAGGCTTTGGTCCTAGTAGGCA
ATGCTGCTGGCCACCAAGTAAATGTTGATGAGTTGTCAGAAAACGTGAAA
TTTGTATTTTTGCCACCTAATACAACGTCTTTATTACGACCACAAGATCA
AGGTATAATTGCCACGTTTAAAACTTATTATTTAAAACAAGCATTTCAAT
ATATTAGAATGAACTAAAAAATGACAGAGCAATAACAGTTATTGATGCTT
GGAAGAAGTTTTCAATTATGGATTGTGTAAAATTTGTAAATATTGCAGTA
ATACATGGATTAAAACCATCAACTTTAAATGCGTGTTGGAAAGCAGTTTG
GCCAGAATGTGTCAAAGATAACAATTGCGTGCTTCCAATTTCCACCGAAT
ATTCCAACATTATAAATTTATCAAACGCAGTTGGTGGAATAGAGTTTGAA
GATTTGGCTTTTGAAGATATTGAAGAAGTCATACTAGATCCAGTTATTAG
CAATGAGTCATTAATGGAAGTAGCTCTAGAGGGTACTGATTTACAGTTCT
TTTACAAGATTTTTTTAAACGGTACCTATCCATCGTGTAAAAAAAGACTT
AGGTGTATAGTACAAAAA
back to top

protein sequence of SMED30012597-orf-1

>SMED30012597-orf-1 ID=SMED30012597-orf-1|Name=SMED30012597-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=117bp
MDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIIN
LSNAVGGIEFEDLAFEDIEEVILDPVISNESLMEVALEGTDLQFFYKIFL
NGTYPSCKKRLRCIVQK
back to top

protein sequence of SMED30012597-orf-2

>SMED30012597-orf-2 ID=SMED30012597-orf-2|Name=SMED30012597-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=105bp
LLPIHWRANKKAWMTESLSQNWVSTRAIPEIKAYCNKENLNFKALVLVGN
AAGHQVNVDELSENVKFVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQY
IRMN*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0003104enteric muscle cell
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding