Prominin (Prom) protein, putative
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012368 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Prominin (Prom) protein, putative vs. Ensembl Xenopus
Match: prom1 (prominin 1 [Source:NCBI gene;Acc:100036621]) HSP 1 Score: 57.3806 bits (137), Expect = 9.710e-8 Identity = 80/376 (21.28%), Postives = 144/376 (38.30%), Query Frame = 1 Query: 1411 GANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQS--------IDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLXXXXXXXXXXXXXXXXXRKIM--------------QTIFQSLTNIENHY----TKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVID--ILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPP 2454 G NFL+ V +F+ S ++M+ VL L V+ C F D N S +G+FT Q N ++ + E N + + S + ++I+ + K NL + + D FD ++ V+ L N+L+ DL + + ++ + + IR I Q I ++ + T ++ + N+N +IK +S ++ + + + + ++ V+ + NVID + F C +VD VN W+GLG +L+IP++IFA+ L YRR+ D P++ + G G + PP Sbjct: 478 GGNFLMAGVGFSFIFSWILMLIVLVTFLAGGNVEKLVCEPFQERALDT----------------------NISDCKENKGIFTALQIDNLFN----LNEFLNINMYIDEISSRIETLNLDLSNIILLDEKGKRNLEDFSSTG--IDEIDFDAFLSEVAKSNTKVDLLAFANELEEN-ADLLPKGALGNALKGHANSIRTIHIQQVVPLEQSMVKKQKILKACITFQGKVLDVITAVEAAQNLINNNASSVIKQESKKLMDEVIGYFIQYVQWVKDSIAFDVAGCKPVANVIDTAVDVFLCSYIVDSVNSFWFGLGGATVLLIPAIIFAIRLAKFYRRMDT----EDPPNFFLFTGGLHPPPGQKTPLTGLPRPPPP 820
BLAST of Prominin (Prom) protein, putative vs. Ensembl Xenopus
Match: prom1 (prominin 1 [Source:NCBI gene;Acc:100036621]) HSP 1 Score: 56.6102 bits (135), Expect = 1.703e-7 Identity = 88/372 (23.66%), Postives = 155/372 (41.67%), Query Frame = 1 Query: 1363 CGERPEEDASCFNRG----VGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYF----------TNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQS--------IDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLXXXXXXXXXXXXXXXXXRKI-----------MQTIFQSLT-------NIENHY----TKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVID--ILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRI 2340 CG ++ S RG G NFL+ V +F+ S ++M+ VL L V+ C F T ++ +NY Y S+ L + YS +G+FT Q N ++ + E N + + S + ++I+ + K NL + + D FD ++ V+ L N+L+ DL + + ++ + + IR I M T+ QS+ +IE T ++ + N+N +IK +S ++ + + + + ++ V+ + NVID + F C +VD VN W+GLG +L+IP++IFA+ L YRR+ Sbjct: 474 CGY--DQQTSPTTRGCISNTGGNFLMAGVGFSFIFSWILMLIVLVTFLAGGNVEKLVCEPFQERALFKVLDTPYLINSQWKNYLSGVLYQNPSVNLTFEKVYSDCKENKGIFTALQIDNLFN----LNEFLNINMYIDEISSRIETLNLDLSNIILLDEKGKRNLEDFSSTG--IDEIDFDAFLSEVAKSNTKVDLLAFANELEEN-ADLLPKGALGNALKGHANSIRTIHIQQVVPLEQSMTTLNQSIKLLQRTSFDIEGKVLDVITAVEAAQNLINNNASSVIKQESKKLMDEVIGYFIQYVQWVKDSIAFDVAGCKPVANVIDTAVDVFLCSYIVDSVNSFWFGLGGATVLLIPAIIFAIRLAKFYRRM 836
BLAST of Prominin (Prom) protein, putative vs. Ensembl Xenopus
Match: prom1 (prominin 1 [Source:NCBI gene;Acc:100036621]) HSP 1 Score: 55.8398 bits (133), Expect = 2.856e-7 Identity = 73/331 (22.05%), Postives = 135/331 (40.79%), Query Frame = 1 Query: 1411 GANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQS--------IDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLXXXXXXXXXXXXXXXXXRKI-----------MQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVID--ILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRI 2340 G NFL+ V +F+ S ++M+ VL L V+ C F K+ + N S +G+FT Q N ++ + E N + + S + ++I+ + K NL + + D FD ++ V+ L N+L+ DL + + ++ + + IR I M+ + + T ++ + N+N +IK +S ++ + + + + ++ V+ + NVID + F C +VD VN W+GLG +L+IP++IFA+ L YRR+ Sbjct: 471 GGNFLMAGVGFSFIFSWILMLIVLVTFLAGGNVEKLVCEPFQERA-----------------LFKVCRDTNISDCKENKGIFTALQIDNLFN----LNEFLNINMYIDEISSRIETLNLDLSNIILLDEKGKRNLEDFSSTG--IDEIDFDAFLSEVAKSNTKVDLLAFANELEEN-ADLLPKGALGNALKGHANSIRTIHIQQVVPLEQSMKACITFQGKVLDVITAVEAAQNLINNNASSVIKQESKKLMDEVIGYFIQYVQWVKDSIAFDVAGCKPVANVIDTAVDVFLCSYIVDSVNSFWFGLGGATVLLIPAIIFAIRLAKFYRRM 777
BLAST of Prominin (Prom) protein, putative vs. Ensembl Xenopus
Match: prom1 (prominin 1 [Source:NCBI gene;Acc:100036621]) HSP 1 Score: 54.6842 bits (130), Expect = 6.576e-7 Identity = 34/116 (29.31%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 2032 TKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVID--ILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRI--QKFYPDRDE 2367 T ++ + N+N +IK +S ++ + + + + ++ V+ + NVID + F C +VD VN W+GLG +L+IP++IFA+ L YRR+ + Y D E Sbjct: 726 TAVEAAQNLINNNASSVIKQESKKLMDEVIGYFIQYVQWVKDSIAFDVAGCKPVANVIDTAVDVFLCSYIVDSVNSFWFGLGGATVLLIPAIIFAIRLAKFYRRMDTEDVYDDATE 841
BLAST of Prominin (Prom) protein, putative vs. Ensembl Xenopus
Match: prom1 (prominin 1 [Source:NCBI gene;Acc:100036621]) HSP 1 Score: 54.299 bits (129), Expect = 9.347e-7 Identity = 31/105 (29.52%), Postives = 56/105 (53.33%), Query Frame = 1 Query: 2032 TKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVID--ILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRI 2340 T ++ + N+N +IK +S ++ + + + + ++ V+ + NVID + F C +VD VN W+GLG +L+IP++IFA+ L YRR+ Sbjct: 707 TAVEAAQNLINNNASSVIKQESKKLMDEVIGYFIQYVQWVKDSIAFDVAGCKPVANVIDTAVDVFLCSYIVDSVNSFWFGLGGATVLLIPAIIFAIRLAKFYRRM 811
BLAST of Prominin (Prom) protein, putative vs. TrEMBL
Match: A0A564YL07 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS6965 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.052e-44 Identity = 211/843 (25.03%), Postives = 384/843 (45.55%), Query Frame = 1 Query: 61 KMFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSS--------INIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAP--PSQIDNEHMQKTFKEL-ESAIKKFFDNLMNVSEVVNLIDQSKIVKQ-----AIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNISTKL-SPCLSDQ---CRDMKDKIDS-LKVI-TVDESQLNKITDLLDSLNSTNFQERLNKVINLNAYGITDLKL----------VLDSEVKNFKN--------IINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQ------RMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKL------LNDLKSAPVDLXXXXXXXXXXXXXXXXXR--KIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYAR---ADGDG 2418 ++ KIA+ + +F + + +T +++ + +F +LIRG+V + I++ + T + ++ K Y+ I G++FA+ +P++G+F C RCCGRCGGR+ PMD K ++V Y+I L L I + A+++ N QL +ES+ + DPSI QFE + +E++ A S +D ++ F + + + F + ++ S ++ + + ++Q A GS++ ++ ++++ + K L +KTNIS L + C +Q CR+++ D+ LKV T+D+ Q IT L L + NKV L+ + LK+ +LD + N + + Q F D+ K L L + +N ++ PL FQ + Y + +L L I ++ + CG+RP E+AS NRGVGANFLL + TFL S+L+MI L+ +VQT+ CRY T D P + D + K + L T+C ++ + +++ + F +S ++ + V +L + L T T++ ++ + S +L +E L+++ + L+S ++ + I + IR ++ ++ L +I Y + F+S L + + I ++ + L + L + + C + + + + C N ++P NG W+GLG+FL+L IP +IF + LV+LYR+ +K+ PD ++PDY +Y FY R ++GD Sbjct: 8 QLLKIAIFV-VFLLQIANANNTATTVQLRKSVQFSYDGAYLFLDLIRGNVSRRATGEMLEVIIDLKNHRYPTILLTAVFKHFPGYMGCLIF---GVLFAMLVPMVGIFFCCIRCCGRCGGRLTPMDRKADPYRRVCYTITLALLITIQLAAIVLCFINYQLYYESLTSKDPSIGAI----PQFEISSREFQNGMTEVLNAAKNSSSVDLVAQKQRFDAVFDVGLSDFQRDFVDNSSAAAVMKEKETLQQVVYRFAAGSRDSNSMKDFISLLKKVEM----ELPFIKTNISDILNTECTVNQLSACRELRFTTDNDLKVAYTMDQFQTKDITAFLQILENVQ-----NKVKELDEFDDPLLKMKENVKKAIQPILDDAWNDLSNSPKTREDLVKSLQGFADYIKSFLSGLDELLINYT-----SSEKPL---------FQGGNEVFLYSGFAFLCLPAFIILLFYLGLSFGV---CGDRPHEEASFCNRGVGANFLLSGIVFTFLFSTLLMIVCTVIFLSAGLVQTEVCRYVT----DRYPNGPAVFDDTVEAFFASLKSVGVANVRPFSTLLTRCANESLVDSLGDEAVGIMVSDNSINSFLESILRTFNGV---DLISPLRKTAVDTLNKLNEVRDLQRYDFSQALQKTSERLTEISDFEAYITQLESLDIENLKDPIMILKETVSSLTIRMDSPIRQLYADLQSIRGTYNQLAEELNSFSSELDRTVPTSIRIQIESMRPLFLKELRLAVIASWRDIPCTRLHSAATNAVDTVCHNFMNPPNGIWFGLGIFLVLCIPVLIFGVKLVNLYRKTEKYSPDYEQPDYISYHAFYMRPAASEGDA 809
BLAST of Prominin (Prom) protein, putative vs. TrEMBL
Match: A0A564YL70 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS6965 PE=4 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 8.909e-44 Identity = 211/843 (25.03%), Postives = 384/843 (45.55%), Query Frame = 1 Query: 61 KMFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSS--------INIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAP--PSQIDNEHMQKTFKEL-ESAIKKFFDNLMNVSEVVNLIDQSKIVKQ-----AIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNISTKL-SPCLSDQ---CRDMKDKIDS-LKVI-TVDESQLNKITDLLDSLNSTNFQERLNKVINLNAYGITDLKL----------VLDSEVKNFKN--------IINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQ------RMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKL------LNDLKSAPVDLXXXXXXXXXXXXXXXXXR--KIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYAR---ADGDG 2418 ++ KIA+ + +F + + +T +++ + +F +LIRG+V + I++ + T + ++ K Y+ I G++FA+ +P++G+F C RCCGRCGGR+ PMD K ++V Y+I L L I + A+++ N QL +ES+ + DPSI QFE + +E++ A S +D ++ F + + + F + ++ S ++ + + ++Q A GS++ ++ ++++ + K L +KTNIS L + C +Q CR+++ D+ LKV T+D+ Q IT L L + NKV L+ + LK+ +LD + N + + Q F D+ K L L + +N ++ PL FQ + Y + +L L I ++ + CG+RP E+AS NRGVGANFLL + TFL S+L+MI L+ +VQT+ CRY T D P + D + K + L T+C ++ + +++ + F +S ++ + V +L + L T T++ ++ + S +L +E L+++ + L+S ++ + I + IR ++ ++ L +I Y + F+S L + + I ++ + L + L + + C + + + + C N ++P NG W+GLG+FL+L IP +IF + LV+LYR+ +K+ PD ++PDY +Y FY R ++GD Sbjct: 8 QLLKIAIFV-VFLLQIANANNTATTVQLRKSVQFSYDGAYLFLDLIRGNVSRRATGEMLEVIIDLKNHRYPTILLTAVFKHFPGYMGCLIF---GVLFAMLVPMVGIFFCCIRCCGRCGGRLTPMDRKADPYRRVCYTITLALLITIQLAAIVLCFINYQLYYESLTSKDPSIGAI----PQFEISSREFQNGMTEVLNAAKNSSSVDLVAQKQRFDAVFDVGLSDFQRDFVDNSSAAAVMKEKETLQQVVYRFAAGSRDSNSMKDFISLLKKVEM----ELPFIKTNISDILNTECTVNQLSACRELRFTTDNDLKVAYTMDQFQTKDITAFLQILENVQ-----NKVKELDEFDDPLLKMKENVKKAIQPILDDAWNDLSNSPKTREDLVKSLQGFADYIKSFLSGLDELLINYT-----SSEKPL---------FQGGNEVFLYSGFAFLCLPAFIILLFYLGLSFGV---CGDRPHEEASFCNRGVGANFLLSGIVFTFLFSTLLMIVCTVIFLSAGLVQTEVCRYVT----DRYPNGPAVFDDTVEAFFASLKSVGVANVRPFSTLLTRCANESLVDSLGDEAVGIMVSDNSINSFLESILRTFNGV---DLISPLRKTAVDTLNKLNEVRDLQRYDFSQALQKTSERLTEISDFEAYITQLESLDIENLKDPIMILKETVSSLTIRMDSPIRQLYADLQSIRGTYNQLAEELNSFSSELDRTVPTSIRIQIESMRPLFLKELRLAVIASWRDIPCTRLHSAATNAVDTVCHNFMNPPNGIWFGLGIFLVLCIPVLIFGVKLVNLYRKTEKYSPDYEQPDYISYHAFYMRPAASEGDA 809
BLAST of Prominin (Prom) protein, putative vs. TrEMBL
Match: A0A4Z2DIH5 (Prominin (Prom) isoform 3 OS=Schistosoma japonicum OX=6182 GN=EWB00_000597 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.959e-42 Identity = 205/826 (24.82%), Postives = 373/826 (45.16%), Query Frame = 1 Query: 178 NIFFNLIRGDVDSSS-----INIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSE---VVNLIDQSKIVKQAI--GSKEISNFQNYMXXXXXXXXXXXDTLSQVKTN-ISTKLSPCLSDQCRD-MKDKIDSLKVITVDES-QLNKITDLLDSLNSTNFQERLNKVINLNAYG--ITDLKLV----LDSEV-KNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQ--NYXXXXXXXXXXXXXAKQPNYSTD----------------------GLMEGLFTQCQTKNFYSA-------FQRMTEKYNSLF--FKSQFQSIDSVIVSNLANKLNLT-QYLTVDPFTDLSKFDQLINSVSLPMNN-ESLSKLLNDLKSAPVD-LXXXXXXXXXXXXXXXXXRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPA---NQGKPPHRGYKPIP 2478 N F +LIRG ++ IN+ + + S++ V + YL + I G++FA+ +P++GL C RCCG+CGGRV+ +D KH CK+V Y++CL + + AV++ N+ L HE++V+ DP I Q+ + + +L+ M ++ K + E ++ + ++ + F ++ + +S+ V ++I + + + GS+ IS +Y + ++ + T+ Q T+ ++T S +C + MK D LKV + QL+++ + S Q L V +LN + I +L ++ +DS++ + +K++ + + + ++ + +K A + + +SN + +++E Y Y + L +I + +LGL FG CG+RP E+A NRGVGAN LL +V FL S+++M+ + L +QT+ CRY T D + Y +L P+ S L + + T+C+ + F A + + + + + + F+ D +VS L N + + L F F + IN + P+ N L++ ++ LK +D L+ I ++ + + R + T+F + N S +N L + S L ++ + L + + C +R + C + P N W GLG LLL IP+++FA+ L LYR+ +K+ D +EPDY +Y GFY R D N N+ + H+GY +P Sbjct: 49 NFFLDLIRGQKPPTAVFETLINVRTSHHSRLTYRSVEPVVTTYLGYGICLIIGVLFAILMPVVGLLFCCARCCGKCGGRVQFVDSKHDPCKRVTYTVCLVLIVTFQLAAVVLVFINHYLFHEALVSRDPRIGAVSQINLSLVEFEASLKDM-VQMAKNTSTTDLAEQKERFMRIVDDGLVDFQEDFIKISQANDVSSVISEFQTTSRDFLPGSEAISQI-SYFNHSLYEMISELPTIRQRLTDTLNTGCSIEKIIECHELMKLANDKLKVRLLPSMLQLDEVISI-----SNQIQRHLTDVDSLNEFSETINNLAVIVRRSIDSDLDRAWKDLAQSPETREKLASVFEGIVANASTALKFARD----LISMDSNEEVNNNYLRTVE-YLLYGGMALLCIPILIFLLLYLGLCFGTCGDRPYEEAGLCNRGVGANLLLAAVGFMFLFSAILMVFCILPFLVGGPLQTEVCRYLTGRYPDGPRKMDQYVFETLKSILVAVERPLPDSSKSRSLHINKDSINTVQSTLDIVRFNLSDTILTRCEHEPFVKAISTGEFVWPVLNDAIDGILQGLVASFKRAD--LVSPLQNIIQSSLAALERLKFLSAINFSEAINQANTPITNINDLNEFVSRLKGLNMDSLTPHIQALVNGPVKLDASRSNIHTLFMRFNSFPNQMNHVVSNLNRYNEKLSTSVHSSMDRGLIKLRPLFTKELQLAVIATWHDIPCQSLRLAAKRGVDSVCYTFLMPFNAFWTGLGFTLLLFIPAIVFAVKLAGLYRKTEKYSRDYEEPDYISYHGFYMRPPTDYQDNNTQKLRNKSR-KHKGYVAVP 859
BLAST of Prominin (Prom) protein, putative vs. TrEMBL
Match: A0A4Z2DIF1 (Prominin (Prom) isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_000597 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.182e-40 Identity = 199/802 (24.81%), Postives = 363/802 (45.26%), Query Frame = 1 Query: 178 NIFFNLIRGDVDSSS-----INIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSE---VVNLIDQSKIVKQAI--GSKEISNFQNYMXXXXXXXXXXXDTLSQVKTN-ISTKLSPCLSDQCRD-MKDKIDSLKVITVDES-QLNKITDLLDSLNSTNFQERLNKVINLNAYG--ITDLKLV----LDSEV-KNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQ--NYXXXXXXXXXXXXXAKQPNYSTD----------------------GLMEGLFTQCQTKNFYSA-------FQRMTEKYNSLF--FKSQFQSIDSVIVSNLANKLNLT-QYLTVDPFTDLSKFDQLINSVSLPMNN-ESLSKLLNDLKSAPVD-LXXXXXXXXXXXXXXXXXRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGD 2415 N F +LIRG ++ IN+ + + S++ V + YL + I G++FA+ +P++GL C RCCG+CGGRV+ +D KH CK+V Y++CL + + AV++ N+ L HE++V+ DP I Q+ + + +L+ M ++ K + E ++ + ++ + F ++ + +S+ V ++I + + + GS+ IS +Y + ++ + T+ Q T+ ++T S +C + MK D LKV + QL+++ + S Q L V +LN + I +L ++ +DS++ + +K++ + + + ++ + +K A + + +SN + +++E Y Y + L +I + +LGL FG CG+RP E+A NRGVGAN LL +V FL S+++M+ + L +QT+ CRY T D + Y +L P+ S L + + T+C+ + F A + + + + + + F+ D +VS L N + + L F F + IN + P+ N L++ ++ LK +D L+ I ++ + + R + T+F + N S +N L + S L ++ + L + + C +R + C + P N W GLG LLL IP+++FA+ L LYR+ +K+ D +EPDY +Y GFY R D Sbjct: 49 NFFLDLIRGQKPPTAVFETLINVRTSHHSRLTYRSVEPVVTTYLGYGICLIIGVLFAILMPVVGLLFCCARCCGKCGGRVQFVDSKHDPCKRVTYTVCLVLIVTFQLAAVVLVFINHYLFHEALVSRDPRIGAVSQINLSLVEFEASLKDM-VQMAKNTSTTDLAEQKERFMRIVDDGLVDFQEDFIKISQANDVSSVISEFQTTSRDFLPGSEAISQI-SYFNHSLYEMISELPTIRQRLTDTLNTGCSIEKIIECHELMKLANDKLKVRLLPSMLQLDEVISI-----SNQIQRHLTDVDSLNEFSETINNLAVIVRRSIDSDLDRAWKDLAQSPETREKLASVFEGIVANASTALKFARD----LISMDSNEEVNNNYLRTVE-YLLYGGMALLCIPILIFLLLYLGLCFGTCGDRPYEEAGLCNRGVGANLLLAAVGFMFLFSAILMVFCILPFLVGGPLQTEVCRYLTGRYPDGPRKMDQYVFETLKSILVAVERPLPDSSKSRSLHINKDSINTVQSTLDIVRFNLSDTILTRCEHEPFVKAISTGEFVWPVLNDAIDGILQGLVASFKRAD--LVSPLQNIIQSSLAALERLKFLSAINFSEAINQANTPITNINDLNEFVSRLKGLNMDSLTPHIQALVNGPVKLDASRSNIHTLFMRFNSFPNQMNHVVSNLNRYNEKLSTSVHSSMDRGLIKLRPLFTKELQLAVIATWHDIPCQSLRLAAKRGVDSVCYTFLMPFNAFWTGLGFTLLLFIPAIVFAVKLAGLYRKTEKYSRDYEEPDYISYHGFYMRPPTD 836
BLAST of Prominin (Prom) protein, putative vs. TrEMBL
Match: A0A0X3P063 (Prominin-1 OS=Schistocephalus solidus OX=70667 GN=PROM1 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.944e-37 Identity = 210/849 (24.73%), Postives = 379/849 (44.64%), Query Frame = 1 Query: 124 NSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSI-----NIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPP--SQIDNEHMQKTFKEL-ESAIKKFFDNLM---NVSEVVNLID--QSKIVKQAIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNISTKL-SPCLSDQ---CRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNAYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKS--------------------IEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLF---------TQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPF--------TDLSK--------FDQLINSVSLPMNN-ESLSKLLNDLKSAPV-DLXXXXXXXXXXXXXXXXXRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIP 2478 +ST ++ ++ + N + +LIRG+ + I + S I V N+ ++ G++F + +PIIGLF C RCC RCGGRVK MD + C++V Y+I L +T + + A++ N QL +E+VV+ D ++ Q+ ++ +E +II A S I+ ++ + F + + + F ++ + + +EV+ L QS + + A + +++++K + L ++ +I+ L + C + CR+ L+ IT+++ + N + S + +NK++NL A TD+ ++ F N I Q+ K+ L ++D + + + E +++ + D + S +Y YY + L +II F++LGL FG CG+RP E+A NRGVGAN L+ + +TFL ++ +M+ + L +VQT+ CRY TN N P+ + + + PN D +E F T+C + A S+ + QSI++V+ NL N N + P T LSK F IN ++ P+ + + +L+S + DL S + +++ + +++ I+ L ++ Y + S + F+ +L + + + + L + L + ++ C + T + + C + P+NG W G LLL I S+IFA+ LVSLYR+I+K+ PD +EPDY +Y GFY R + + P + + +G K P Sbjct: 28 SSTAVQLRASVAFSHDVANYYLDLIRGNASEEATAEVLTGIRDMARDRPSTQYIIPVFRNFPGYTACVVFGVLFIILVPIIGLFFCCLRCCHRCGGRVKLMDRRKDPCRRVTYTIFLALITTLQLVAIVFAFINYQLHYEAVVSRDVAVGCVPQLNFSAQQFDIAVE----QIIVAAKNTSTINLDNQKAKFDAMVDDGLTAFQNDFVRNSSATEVLRLQQEFQSVVFRYAENQLPPTTWRDFIKQLRDLQTELQPHAPSLRASIAEALNTGCEVSKITACRE-------LRTITLEQLEPNFTLEQFQS-------DDVNKLLNLLASSQTDVH-----DLDQFNNTI--QSMKSDIKRELQPILDGAWRNLSDSPETRQDLVRSMEELAGDVHRSLSAFHSSLVEFTTVRDSPDGIKFREYAYYSGIALICLPVLIIFFYYLGLCFGTCGDRPYEEAGLCNRGVGANLLMAGIVLTFL-TAFLMLFCTATFLPGGLVQTELCRYLTNRYP-NGPR-VIDDTVINIANFVQSSHPNQPRDLRLERFFKMRVAELLLTRCANQTLVDA-----AGDESIGWMVSNQSINTVL-ENLLNTFNSID--IISPLRNSAAGMQTTLSKLGSFEGFDFSTAINQLNQPLIRIPDFADYIRNLRSLNIADLKSLVDDLENKHQLLHLQLGLIKEIYLQLNSLGPLYFQLTSALQTFSQDLEQTVPNSIHARINDMRSLFLRELRLAVIASWREIPCTNLHTASVSAVDALCVTYLGPLNGFWASFGTCLLLSIVSLIFAVKLVSLYRKIEKYSPDYEEPDYISYHGFYMRPTNEVDVQRP--RKRRGQKGNKNAP 838
BLAST of Prominin (Prom) protein, putative vs. Planmine SMEST
Match: SMESG000025078.1 (SMESG000025078.1) HSP 1 Score: 1451.42 bits (3756), Expect = 0.000e+0 Identity = 808/811 (99.63%), Postives = 808/811 (99.63%), Query Frame = 1 Query: 52 MELKMFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNAYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLXXXXXXXXXXXXXXXXXRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ 2484 MELKMFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFCRCCGRCGGRVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMKNVNKKLKNLNDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLN YGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRYYIYLGLSIGIAIIIIFHFLGLLFGNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYKLLDKYLVLSLKLAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLSSEISSIKSIAANISQIRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILK IEKNILDLMNLLFGTMFSKVSC EVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ Sbjct: 1 MELKMFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFCRCCGRCGGRVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMKNVNKKLKNLNDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNTYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRYYIYLGLSIGIAIIIIFHFLGLLFGNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYKLLDKYLVLSLKLAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLSSEISSIKSIAANISQIRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKLIEKNILDLMNLLFGTMFSKVSCVEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ 811
BLAST of Prominin (Prom) protein, putative vs. Planmine SMEST
Match: SMESG000025078.1 (SMESG000025078.1) HSP 1 Score: 1442.94 bits (3734), Expect = 0.000e+0 Identity = 804/807 (99.63%), Postives = 804/807 (99.63%), Query Frame = 1 Query: 64 MFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNAYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLXXXXXXXXXXXXXXXXXRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ 2484 MFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFCRCCGRCGGRVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMKNVNKKLKNLNDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLN YGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRYYIYLGLSIGIAIIIIFHFLGLLFGNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYKLLDKYLVLSLKLAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLSSEISSIKSIAANISQIRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILK IEKNILDLMNLLFGTMFSKVSC EVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ Sbjct: 1 MFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFCRCCGRCGGRVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMKNVNKKLKNLNDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNTYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRYYIYLGLSIGIAIIIIFHFLGLLFGNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYKLLDKYLVLSLKLAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLSSEISSIKSIAANISQIRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKLIEKNILDLMNLLFGTMFSKVSCVEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ 807
BLAST of Prominin (Prom) protein, putative vs. Planmine SMEST
Match: SMESG000025078.1 (SMESG000025078.1) HSP 1 Score: 1394.02 bits (3607), Expect = 0.000e+0 Identity = 778/781 (99.62%), Postives = 778/781 (99.62%), Query Frame = 1 Query: 142 MKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNAYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRXXXXXXXXXXXXXXXXXXXXXXXXXNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYXXXXXXXXXXXXXAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLXXXXXXXXXXXXXXXXXRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ 2484 MKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFCRCCGRCGGRVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMKNVNKKLKNLNDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLN YGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRYYIYLGLSIGIAIIIIFHFLGLLFGNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYKLLDKYLVLSLKLAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLSSEISSIKSIAANISQIRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILK IEKNILDLMNLLFGTMFSKVSC EVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ Sbjct: 1 MKQGISPFNRAGNIFFNLIRGDVDSSSINIDEYINLTFSIDSIKKVASNYLSHSILFATGIVFAVFLPIIGLFICFCRCCGRCGGRVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHMQKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMKNVNKKLKNLNDTLSQVKTNISTKLSPCLSDQCRDMKDKIDSLKVITVDESQLNKITDLLDSLNSTNFQERLNKVINLNTYGITDLKLVLDSEVKNFKNIINNQTFTDHAKKILVQLIDRSLNIVKLAAENTPSPLKNESNYSKDFQTTKSIEKYRYYIYLGLSIGIAIIIIFHFLGLLFGNCGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDNAPQNYKLLDKYLVLSLKLAKQPNYSTDGLMEGLFTQCQTKNFYSAFQRMTEKYNSLFFKSQFQSIDSVIVSNLANKLNLTQYLTVDPFTDLSKFDQLINSVSLPMNNESLSKLLNDLKSAPVDLSSEISSIKSIAANISQIRKIMQTIFQSLTNIENHYTKWKSMAEIFNSNLVVIIKSQSPIILKLIEKNILDLMNLLFGTMFSKVSCVEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYARADGDGVKKNPANQGKPPHRGYKPIPLQ 781
BLAST of Prominin (Prom) protein, putative vs. Planmine SMEST
Match: SMESG000013192.1 (SMESG000013192.1) HSP 1 Score: 85.8853 bits (211), Expect = 6.802e-17 Identity = 71/223 (31.84%), Postives = 124/223 (55.61%), Query Frame = 1 Query: 322 IVFAVFLPIIGLFICFXXXXXXXXXXVKPMDPKHVKCKKVAYSICLTTLTVIMIFAVIITLFNNQLVHESVVNSDPSINIFLQVKNQFEKIKTNLETMKSEIIKAPPSQIDNEHM--QKTFKELESAIKKFFDNLMNVSEVVNLIDQSKIVKQAIGSKEISNFQNYMXXXXXXXXXXXDTLSQVKTNI----STKLSPCLSDQCRDMKDKIDSLKVITVDESQ 972 ++F V +PI+G C CRC G+CGG+VK MDPKH CK+ Y++ L ++VIM+ +++ NNQL+H+++ N IN Q+KN E + +L + EI A S +N+ M + F+++ S +++F+ L S + D ++ +A +S N+++ V K + L D +++KT I +TK++ +SD K D+LK + +S+ Sbjct: 100 VLFVVLMPIVGFCFCLCRCGGKCGGKVKGMDPKHAICKRYTYAVLLGMISVIMLAGIVLAFINNQLIHDTLTNPSKEINAISQIKNSAELMHNSLSNISIEISNAEKSSRNNDGMIDKTQFQDVLS--RQYFNKLKVDSFNEKVKDSLSLIMEA-----LSQTTNFLQRVKKPNEKLKDLETKLKTYIENLETTKMNQAVSDLLSTCKSDFDALKQLMKSQSK 315 HSP 2 Score: 81.6481 bits (200), Expect = 1.265e-15 Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 2053 EIFNSNLVVIIKSQSPIILKRIEKNILDLMNLLFGTMFSKVSCAEVRTNVIDILKFTCENVVDPVNGCWYGLGVFLLLVIPSMIFALLLVSLYRRIQKFYPDRDEPDYENYIGFYA-RADGDGVKKNPANQGKPPHR 2460 E F+SN+ + S I +K I +N ++ + +V C + + ++ C ++ P NG WYG+G+ L+ IP++IFA+ L LYR +K+ D +EPDY +Y+GFY AD +KK + + +R Sbjct: 583 EFFDSNVSNNLNSALTIEVKSI-------LNKVYIGSYDQVKCVGMYNSTKMLIDAFCVTLLWPYNGFWYGIGICLVFTIPAIIFAVKLAGLYRHTEKYSADYEEPDYHSYMGFYTNNADNIPMKKPKSGKSSQKNR 712 HSP 3 Score: 63.929 bits (154), Expect = 4.023e-10 Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 1 Query: 1363 CGERPEEDASCFNRGVGANFLLISVTVTFLLSSLIMITVLSNLLTTNIVQTDFCRYFTNSTKDN 1554 CGERP EDA NRGVGAN ++ V FL + IM ++ QT+ CRY TNS D Sbjct: 385 CGERPFEDARICNRGVGANLMMAGVAFAFLFTPSIMGITMTLFTNGGFTQTEACRYLTNSYGDG 448 The following BLAST results are available for this feature:
BLAST of Prominin (Prom) protein, putative vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Prominin (Prom) protein, putative vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Prominin (Prom) protein, putative vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Prominin (Prom) protein, putative vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012368 ID=SMED30012368|Name=Prominin (Prom) protein, putative|organism=Schmidtea mediterranea sexual|type=transcript|length=2691bpback to top protein sequence of SMED30012368-orf-1 >SMED30012368-orf-1 ID=SMED30012368-orf-1|Name=SMED30012368-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=812bp MELKMFKIAVILSIFYISSITCISNSTFESMKQGISPFNRAGNIFFNLIRback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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