Translocon-associated protein subunit alpha
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012282 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Human
Match: SSR1 (signal sequence receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:11323]) HSP 1 Score: 130.568 bits (327), Expect = 8.393e-35 Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK---QVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM L + L + +S K Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM---------FLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKR 280
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Human
Match: SSR1 (signal sequence receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:11323]) HSP 1 Score: 130.568 bits (327), Expect = 8.881e-35 Identity = 70/187 (37.43%), Postives = 104/187 (55.61%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK---QVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRRH 935 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM L + L + +S K Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM---------FLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRS 281
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Human
Match: SSR1 (signal sequence receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:11323]) HSP 1 Score: 129.413 bits (324), Expect = 2.639e-34 Identity = 70/191 (36.65%), Postives = 105/191 (54.97%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK---QVMELGTSNKADLDLQWIPAEHL-------KVRQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM L + L + +S K Q +E+GTS++ D+D+ WIP E L + + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM---------FLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRLPRKRAQKR 285
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Human
Match: SSR1 (signal sequence receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:11323]) HSP 1 Score: 129.028 bits (323), Expect = 3.921e-34 Identity = 70/191 (36.65%), Postives = 105/191 (54.97%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK---QVMELGTSNKADLDLQWIPAEHL-------KVRQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM L + L + +S K Q +E+GTS++ D+D+ WIP E L + + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM---------FLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRLPRKRAQKR 285
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Human
Match: SSR1 (signal sequence receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:11323]) HSP 1 Score: 122.094 bits (305), Expect = 7.709e-32 Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK---QVMELGTSNKADLDLQWIPAEHL 881 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM L + L + +S K Q +E+GTS++ D+D+ WIP E L Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM---------FLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETL 261
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Celegans
Match: trap-1 (TRanslocon-Associated Protein [Source:UniProtKB/TrEMBL;Acc:Q95XT5]) HSP 1 Score: 111.694 bits (278), Expect = 1.875e-28 Identity = 64/179 (35.75%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 417 KDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK-QVMELGTSNKADLDLQWIPAEHLKVRQ--SP-TISPRKRKSRRHED 941 KD+ + Y E R+P+D+SY+LQNFT + + PK E T+ Y F + AGRP GL + V Y + +G +F + +N T+ ++E + GF E+ FL++ + G +L + K +KSG++K +V+E GTS +++D +WIP + +K ++ SP T+SP+ RKS + D Sbjct: 85 KDFVVKYAETSFRFPTDHSYHLQNFTRGEYNRRVAPKEEVTLDYGFYAHETFAGRPVGLVVNVHYQDADGNVFVNNVYNQTINIMEDDSGFSGETGFLFI----FFVALSIGGLYLSNQFLSKLSRKSGLSKRRVVEQGTS--SEVDFEWIPRDAVKNKEKRSPATVSPKARKSAKKAD 257
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Fly
Match: l(1)G0320 (gene:FBgn0028327 transcript:FBtr0343412) HSP 1 Score: 113.62 bits (283), Expect = 1.112e-28 Identity = 64/181 (35.36%), Postives = 106/181 (58.56%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKVRQSPTISPRKRKSRR 932 FTN +++ ++ VE RYP D++Y++QNF++ + ++P E+TV Y+F P+ Q AGRPFGL + + Y + G + FN+TV + E++EG D E+ FLY+L+A ++ L+L + K +K K+V+E GT+N + +D W+P E L+ Q SP K K+ + Sbjct: 99 FTNK---GAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGK--RKRAAAKKVIETGTANDSTIDYDWVPQETLRALQK---SPPKSKTPK 271
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Fly
Match: l(1)G0320 (gene:FBgn0028327 transcript:FBtr0071372) HSP 1 Score: 113.62 bits (283), Expect = 1.112e-28 Identity = 64/181 (35.36%), Postives = 106/181 (58.56%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKVRQSPTISPRKRKSRR 932 FTN +++ ++ VE RYP D++Y++QNF++ + ++P E+TV Y+F P+ Q AGRPFGL + + Y + G + FN+TV + E++EG D E+ FLY+L+A ++ L+L + K +K K+V+E GT+N + +D W+P E L+ Q SP K K+ + Sbjct: 99 FTNK---GAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGK--RKRAAAKKVIETGTANDSTIDYDWVPQETLRALQK---SPPKSKTPK 271
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Zebrafish
Match: ssr1 (signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]) HSP 1 Score: 113.235 bits (282), Expect = 1.015e-28 Identity = 53/157 (33.76%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 414 NKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLK 884 ++++ ++ ++ RYP D+ +Y+QNFT+ L + P+R+AT YSF PA+ + GRPFGL + + Y ++ G +F FN TV + E E+G D E++F+Y+ ++ + L++ G++ L +++ +E+ TSN D+D+ WIP E L Sbjct: 116 SENFVVESLDASFRYPQDFQFYIQNFTALQLGTLVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDDSGNVFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLLVIGLHQLLESRKMRR------PAAKVEMDTSNHNDVDMSWIPQETLN 266
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Xenopus
Match: ssr1 (signal sequence receptor, alpha (translocon-associated protein alpha) [Source:NCBI gene;Acc:549666]) HSP 1 Score: 128.642 bits (322), Expect = 3.519e-34 Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +N + ++ ++ RYP DY +Y+QNFT+ L+ + P+++AT YSF PA+ + GRPFGL + + Y + G F FN TV + E E+G D E++F+Y+ + + LV+ G++ L K+ Q +E+GTSN+ D+D+ WIP E L + SP SPRKR +R Sbjct: 107 FTNKGPEN---FIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNYKDANGNAFQDAVFNQTVTITEKEDGLDGETIFMYLFLGGLGLLVIVGLHQLLESRKRKR------PAQKVEMGTSNQNDVDMSWIPPETLSQINKASPRRSPRKRGPKR 280
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Xenopus
Match: ssr1 (signal sequence receptor, alpha (translocon-associated protein alpha) [Source:NCBI gene;Acc:549666]) HSP 1 Score: 128.257 bits (321), Expect = 4.814e-34 Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +N + ++ ++ RYP DY +Y+QNFT+ L+ + P+++AT YSF PA+ + GRPFGL + + Y + G F FN TV + E E+G D E++F+Y+ + + LV+ G++ L K+ Q +E+GTSN+ D+D+ WIP E L + SP SPRKR +R Sbjct: 98 FTNKGPEN---FIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNYKDANGNAFQDAVFNQTVTITEKEDGLDGETIFMYLFLGGLGLLVIVGLHQLLESRKRKR------PAQKVEMGTSNQNDVDMSWIPPETLSQINKASPRRSPRKRGPKR 271
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Xenopus
Match: ssr1 (signal sequence receptor, alpha (translocon-associated protein alpha) [Source:NCBI gene;Acc:549666]) HSP 1 Score: 127.102 bits (318), Expect = 1.303e-33 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL-------KVRQSPTISPRKRKSRR 932 FTN +N + ++ ++ RYP DY +Y+QNFT+ L+ + P+++AT YSF PA+ + GRPFGL + + Y + G F FN TV + E E+G D E++F+Y+ + + LV+ G++ L K+ Q +E+GTSN+ D+D+ WIP E L + + SP SPRKR +R Sbjct: 107 FTNKGPEN---FIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNYKDANGNAFQDAVFNQTVTITEKEDGLDGETIFMYLFLGGLGLLVIVGLHQLLESRKRKR------PAQKVEMGTSNQNDVDMSWIPPETLSQIMQSRRDKASPRRSPRKRGPKR 285
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Mouse
Match: Ssr1 (signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]) HSP 1 Score: 130.954 bits (328), Expect = 3.718e-35 Identity = 72/183 (39.34%), Postives = 109/183 (59.56%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM +A + LV+ G++ L K+ Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKR------PIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRQPRKRAQKR 280
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Mouse
Match: Ssr1 (signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]) HSP 1 Score: 129.798 bits (325), Expect = 1.314e-34 Identity = 72/188 (38.30%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL-------KVRQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM +A + LV+ G++ L K+ Q +E+GTS++ D+D+ WIP E L + + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKR------PIQKVEMGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRQPRKRAQKR 285
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Mouse
Match: Ssr1 (signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]) HSP 1 Score: 123.25 bits (308), Expect = 6.337e-32 Identity = 71/193 (36.79%), Postives = 111/193 (57.51%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKVRQSPTISPRKRKSRRHEDNHVTGH*II 968 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM +A + LV+ G++ L + +K Q +E+GTS++ D+D+ WIP E L IS + RR E+ H ++ Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLL------ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLN-----QIS--AERERRAEETLQLSHPVV 283
BLAST of Translocon-associated protein subunit alpha vs. UniProt/SwissProt
Match: sp|P45433|SSRA_ONCMY (Translocon-associated protein subunit alpha OS=Oncorhynchus mykiss OX=8022 GN=ssr1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 9.497e-35 Identity = 69/184 (37.50%), Postives = 108/184 (58.70%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL----KVRQSPTISPRKRKSR 929 FTN ++D+ + +E RYP D+ +Y+QNFT+ L ++P+++A+ YSF PAQ +AGRPFGL + + Y ++EG F + +N TV ++E+EEG D E++F+Y+ + ++ L +FG+Y + K+F +E GT +D+ WIP E L K SP SPRKR R Sbjct: 108 FTNK---GSQDFTVHSLEASFRYPQDFQFYIQNFTALPLSTVVQPQKQASFEYSFIPAQPMAGRPFGLVILLNYQDSEGNGFQTAIYNQTVTIVELEEGLDGETIFMYIFLTGLVVLAVFGMYQVLESRTRKRFPVK------VETGTGGMNGVDISWIPQETLNIMSKASASPKASPRKRTKR 282
BLAST of Translocon-associated protein subunit alpha vs. UniProt/SwissProt
Match: sp|Q9CY50|SSRA_MOUSE (Translocon-associated protein subunit alpha OS=Mus musculus OX=10090 GN=Ssr1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.601e-34 Identity = 72/183 (39.34%), Postives = 109/183 (59.56%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM +A + LV+ G++ L K+ Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKR------PIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRQPRKRAQKR 280
BLAST of Translocon-associated protein subunit alpha vs. UniProt/SwissProt
Match: sp|P43307|SSRA_HUMAN (Translocon-associated protein subunit alpha OS=Homo sapiens OX=9606 GN=SSR1 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 4.031e-34 Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTK---QVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV VIE E+G D E++F+YM L + L + +S K Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM---------FLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKR 280
BLAST of Translocon-associated protein subunit alpha vs. UniProt/SwissProt
Match: sp|A6QLP7|SSRA_BOVIN (Translocon-associated protein subunit alpha OS=Bos taurus OX=9913 GN=SSR1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.573e-34 Identity = 71/183 (38.80%), Postives = 110/183 (60.11%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV +IE E+G D E++F+YM +A + LV+ G++ L + +K Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLL------ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKR 280
BLAST of Translocon-associated protein subunit alpha vs. UniProt/SwissProt
Match: sp|P16967|SSRA_CANLF (Translocon-associated protein subunit alpha OS=Canis lupus familiaris OX=9615 GN=SSR1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.877e-34 Identity = 71/183 (38.80%), Postives = 109/183 (59.56%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +D+ ++ ++ RYP DY +Y+QNFT+ L+ + P+R+AT YSF PA+ + GRPFGL + + Y + G +F FN TV +IE E+G D E++F+YM +A + LV+ G++ L K+ Q +E+GTS++ D+D+ WIP E L + SP PRKR +R Sbjct: 107 FTNK---GTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKR------PIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKR 280
BLAST of Translocon-associated protein subunit alpha vs. TrEMBL
Match: A0A0P4WHD0 (Uncharacterized protein OS=Scylla olivacea OX=85551 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.420e-38 Identity = 74/182 (40.66%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL-KVRQSPTISPRKRKSRR 932 FTN+ +KD+ LD ++ RYP D+++Y+QNFT+ + ++P++EATV YSF PA+ A RP GLT+ + YH+ +G F FN TV ++E++EG D E+ FLY+ + A L+L +H + + KK G K V+E+GTS + D+D W+P E L +++++P SPR RK++R Sbjct: 113 FTNN---GDKDFILDAIDASFRYPMDFNFYIQNFTAIPYNRAVKPRQEATVMYSFYPAEAFAARPLGLTVNLAYHDADGNSFLEAVFNQTVSIVELDEGMDGETFFLYVFLLAFSVLLLVAGHHFLSSFGRKK----GSKKAVVEVGTSKRDDVDYDWLPKEVLNEIKKTPRQSPRTRKAKR 287
BLAST of Translocon-associated protein subunit alpha vs. TrEMBL
Match: A0A423TZN8 (Translocon-associated protein subunit alpha OS=Penaeus vannamei OX=6689 GN=C7M84_024914 PE=4 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 7.736e-38 Identity = 70/186 (37.63%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL-KVRQSPTISPRKRKSRRHEDN 944 FTN+ +KD+ LD ++ RYP D+++Y+QNFT+ + ++P++EATV YSF PA+ AGRP GLT+ + YH+ +G +F FN TV ++E++EG D E+ FLY+ + A L+L +H + + ++ G + +E+GT +D W+P E L ++++SP SPR+RK+ R ++ Sbjct: 37 FTNN---GDKDFILDAIDASFRYPMDFNFYIQNFTAIPYNRAVKPRQEATVMYSFYPAEAFAGRPLGLTVNLAYHDADGNVFVDPVFNQTVNIVEVDEGMDGETFFLYIFMLAFAVLLLVAGHHFLSSFG----RRRGGKRHTVEMGTKKSNSVDYDWLPKELLSEIKKSPRQSPRQRKAARETNS 215
BLAST of Translocon-associated protein subunit alpha vs. TrEMBL
Match: A0A2D0PN21 (translocon-associated protein subunit alpha-like OS=Ictalurus punctatus OX=7998 GN=LOC108255209 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.557e-37 Identity = 72/182 (39.56%), Postives = 112/182 (61.54%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSR 929 FTN ++D+ + +E RYP DY +Y+QNFT+ LD ++P+ +A+ YSF PAQ +AGRPFGL + + YH++EG +F S FN TV + E++EG D E++F+Y+ + ++ L+ LF +Y + + + +E+GT D+D+ WIP E L V + SP SPRKR +R Sbjct: 110 FTNK---GSQDFTVRSLEASFRYPQDYQFYIQNFTALQLDAVVQPENQASFEYSFIPAQPMAGRPFGLVILLNYHDSEGNIFQSAIFNQTVTITELDEGLDGETMFMYIFLGGLVFLI------LFGMYQVLESRTRKRVPVKVEMGTGGMNDVDISWIPQETLNVMNKASPRASPRKRATR 282
BLAST of Translocon-associated protein subunit alpha vs. TrEMBL
Match: A0A5N5J6Q9 (Uncharacterized protein OS=Pangasianodon hypophthalmus OX=310915 GN=PHYPO_G00248800 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 8.781e-35 Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSR 929 FTN ++D+ + +E RYP DY +Y+QNFT+ L+ ++P+++A+ YSF PAQ +AGRPFGL + + YH++EG +F S FN TV + E++EG D E++F+Y+ L LF +Y + + + +E GT D+D+ WIP E L + SP SPRKR R Sbjct: 111 FTNK---GSQDFTVRSLEASFRYPQDYQFYIQNFTALQLEAVVQPEKQASFEYSFIPAQPMAGRPFGLVILLNYHDSEGNVFQSAIFNQTVTITELDEGLDGETMFMYI------FLGGLVFLMLFGLYQVLESRTRKRVPVKVETGTGGMNDVDISWIPQETLNAMNKASPRASPRKRARR 283
BLAST of Translocon-associated protein subunit alpha vs. TrEMBL
Match: A0A0P7URY9 (Translocon-associated protein subunit alpha-like OS=Scleropages formosus OX=113540 GN=Z043_108944 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.100e-34 Identity = 71/182 (39.01%), Postives = 110/182 (60.44%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSR 929 FTN +D+ + +E RYP D+ +Y+QNFT+ L+ ++P+R+A+ YSF PAQ +AGRPFGL + + Y ++EG F ST +N TV + E+EEG D E++F+Y+ ++ ++ L+ LF +Y + + + +E GT D+D+ WIP E LK + SP SPRKR R Sbjct: 92 FTNK---GEQDFAVRSLEASFRYPQDFQFYIQNFTALPLNTVVQPQRQASFEYSFIPAQPMAGRPFGLVILLNYQDSEGNTFQSTIYNQTVTITELEEGLDGETMFMYVFLSGLVVLL------LFGIYQVLESRTRKRLPAKVETGTGGLRDVDISWIPQETLKAMNKTSPRASPRKRAKR 264
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Cavefish
Match: ssr1 (signal sequence receptor subunit 1 [Source:NCBI gene;Acc:103036917]) HSP 1 Score: 129.413 bits (324), Expect = 7.533e-35 Identity = 71/183 (38.80%), Postives = 111/183 (60.66%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +N + ++ ++ RYP D+ +Y+QNFT+ L + + P+R+AT YSF PA+ + GRPFGL + + Y +N G +F FN TV + E E+G D E++F+Y+ ++ + LV+ G++ L L+ K+ +V E+GTSN D+D+ WIP E L + SP SPRKR +R Sbjct: 94 FTNKGSEN---FVVESLDASFRYPQDFQFYIQNFTALQLGLVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDNNGNVFQDAVFNQTVTITEKEDGLDGETIFMYVFLSGLGLLVVVGLHQL-----LESRKRRRPAAKV-EMGTSNHNDVDMSWIPQETLNQINKASPRRSPRKRTQKR 267
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Cavefish
Match: ssr1 (signal sequence receptor subunit 1 [Source:NCBI gene;Acc:103036917]) HSP 1 Score: 128.257 bits (321), Expect = 3.587e-34 Identity = 71/188 (37.77%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL-------KVRQSPTISPRKRKSRR 932 FTN +N + ++ ++ RYP D+ +Y+QNFT+ L + + P+R+AT YSF PA+ + GRPFGL + + Y +N G +F FN TV + E E+G D E++F+Y+ ++ + LV+ G++ L L+ K+ +V E+GTSN D+D+ WIP E L + + SP SPRKR +R Sbjct: 113 FTNKGSEN---FVVESLDASFRYPQDFQFYIQNFTALQLGLVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDNNGNVFQDAVFNQTVTITEKEDGLDGETIFMYVFLSGLGLLVVVGLHQL-----LESRKRRRPAAKV-EMGTSNHNDVDMSWIPQETLNQIMQSRRDKASPRRSPRKRTQKR 291
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Sea Lamprey
Match: ssr1 (signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]) HSP 1 Score: 124.405 bits (311), Expect = 1.118e-33 Identity = 68/179 (37.99%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 408 DNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLK--VRQSPTISPRKRKSRRHE 938 + ++++ ++ ++ RYP D+ +Y+QNFT+ LD ++P +AT YSF PA+ + GRPFGL + +GY + + + FN TV V E +EG D E+ F+YM +A ++ L+L G + L L+ K+ + + +E+GTSN +D+ WIP E L + SP SPRKR +RR E Sbjct: 97 NGSEEFVVESLDASFRYPQDFQFYIQNFTALQLDTLVKPHHQATFEYSFIPAEPMGGRPFGLVISLGYRDATAQ-YRDAVFNQTVTVTEPDEGIDGETFFMYMFLAGLVVLLLVGAHQL-----LESRKRKRPSAKPVEMGTSNPNGVDMSWIPQETLNHMNKASPKRSPRKRVTRRSE 269
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Nematostella
Match: EDO46015 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRI8]) HSP 1 Score: 122.094 bits (305), Expect = 2.570e-32 Identity = 60/152 (39.47%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 420 DYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAE 875 D+ +D +E LRYP DYSYY+QNFT+ + ++P +A+ Y+F P + GRPFGL++ + Y + +GK++ FN+TVQ++E +EG D E+ FLY+ +AA+ L++ + Y L KKS +K +E+GT D+D +W+P E Sbjct: 119 DFMVDMMEASLRYPQDYSYYIQNFTAFQYNTVVKPGHQASFEYAFRPHESFGGRPFGLSINLLYKDTDGKMYRDAVFNETVQLVESDEGMDGETFFLYLFIAAIALLLVMAAH-----YGLTSIKKSS-SKAPIEMGTQQDGDIDYEWLPKE 264
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Medaka
Match: ssr1 (signal sequence receptor subunit 1 [Source:NCBI gene;Acc:101155969]) HSP 1 Score: 130.183 bits (326), Expect = 6.979e-35 Identity = 70/183 (38.25%), Postives = 107/183 (58.47%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSRR 932 FTN +N + +D ++ RYP DY +Y+QNFT+ L + P R+AT YSF PA+ + GRPFGL + + Y ++ G +F FN TV + E E+G D E++F+Y+ ++ + LV + ++ L + +K Q +E GTS+ D+D+ WIPAE L + SP SPRKR +R Sbjct: 113 FTNKGPEN---FVVDSLDASFRYPQDYQFYIQNFTALQLGTVVPPGRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNIFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLV------IVGLHQLLESRKRRRPAQKVETGTSSHNDVDMSWIPAETLNQINKASPRRSPRKRNQKR 286
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Medaka
Match: ssr1 (signal sequence receptor subunit 1 [Source:NCBI gene;Acc:101155969]) HSP 1 Score: 129.028 bits (323), Expect = 2.304e-34 Identity = 70/188 (37.23%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL-------KVRQSPTISPRKRKSRR 932 FTN +N + +D ++ RYP DY +Y+QNFT+ L + P R+AT YSF PA+ + GRPFGL + + Y ++ G +F FN TV + E E+G D E++F+Y+ ++ + LV + ++ L + +K Q +E GTS+ D+D+ WIPAE L + + SP SPRKR +R Sbjct: 113 FTNKGPEN---FVVDSLDASFRYPQDYQFYIQNFTALQLGTVVPPGRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNIFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLV------IVGLHQLLESRKRRRPAQKVETGTSSHNDVDMSWIPAETLNQIMQSRRDKASPRRSPRKRNQKR 291
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Medaka
Match: ENSORLT00000019560.2 (translocon-associated protein subunit alpha [Source:NCBI gene;Acc:101155508]) HSP 1 Score: 121.709 bits (304), Expect = 8.839e-32 Identity = 65/182 (35.71%), Postives = 107/182 (58.79%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKV--RQSPTISPRKRKSR 929 FTN ++ + + +E RYP D+ +++QNFT+ L+ ++P+ +A+ YSF PAQ +AGRPFGL + + Y +EG ++ + +N TV + E EEG D E++F+Y+ + ++ L+LFG+Y + K+ +E GT+ D+D+ WIP E L + SP SP+KR R Sbjct: 109 FTNK---GSQTFTVQSLEASFRYPQDFQFFIQNFTALPLNTVVQPQAQASFEYSFIPAQPMAGRPFGLVILLSYLGSEGGVYQTAIYNQTVTITEREEGLDGETMFMYVFLFGLVALMLFGMYQVLESRTRKRLPVK------IEKGTAGLNDVDISWIPTETLNAMNKASPKTSPKKRAKR 281
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Medaka
Match: ssr1 (signal sequence receptor subunit 1 [Source:NCBI gene;Acc:101155969]) HSP 1 Score: 119.013 bits (297), Expect = 1.488e-30 Identity = 62/164 (37.80%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHL 881 FTN +N + +D ++ RYP DY +Y+QNFT+ L + P R+AT YSF PA+ + GRPFGL + + Y ++ G +F FN TV + E E+G D E++F+Y+ ++ + LV + ++ L + +K Q +E GTS+ D+D+ WIPAE L Sbjct: 113 FTNKGPEN---FVVDSLDASFRYPQDYQFYIQNFTALQLGTVVPPGRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNIFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLV------IVGLHQLLESRKRRRPAQKVETGTSSHNDVDMSWIPAETL 267
BLAST of Translocon-associated protein subunit alpha vs. Planmine SMEST
Match: SMESG000013803.1 (SMESG000013803.1) HSP 1 Score: 368.237 bits (944), Expect = 6.499e-150 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 3 Query: 390 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMXXXXXXXXXXXXXYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKVRQSPTISPRKRKSRRHEDNHVTGH 959 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMLVAAVLGLVLFGVYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKVRQSPTISPRKRKSRRHEDNHVTGH Sbjct: 118 FTNDEMDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFTPAQQLAGRPFGLTLRVGYHNNEGKLFTSTFFNDTVQVIEIEEGFDTESLFLYMLVAAVLGLVLFGVYHLFTVYALKKFKKSGVTKQVMELGTSNKADLDLQWIPAEHLKVRQSPTISPRKRKSRRHEDNHVTGH 307 HSP 2 Score: 182.185 bits (461), Expect = 6.499e-150 Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 1 Query: 40 MFYKALFFLFLISAPFIKAQSNEDPIXXXXXXXXXXXXXXXXXXXXXXXXKLNEDKIVTEILDSPQDQTEQAFVDGVPAGSKNVKTELLFTEPPYNKRSNGVGIELPANKPVKILIS 390 MFYKALFFLFLISAPFIKAQSNEDPISASSVESD+EDVVTDDSAAEEAEDKLNEDKIVTEILDS QDQTEQAFVDGVPAGSKNVKTELLFTEPPYNKRSNGVGIELPANKPVKILIS Sbjct: 1 MFYKALFFLFLISAPFIKAQSNEDPISASSVESDDEDVVTDDSAAEEAEDKLNEDKIVTEILDSQQDQTEQAFVDGVPAGSKNVKTELLFTEPPYNKRSNGVGIELPANKPVKILIS 117 The following BLAST results are available for this feature:
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Translocon-associated protein subunit alpha vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Translocon-associated protein subunit alpha vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Translocon-associated protein subunit alpha vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of Translocon-associated protein subunit alpha vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012282 ID=SMED30012282|Name=Translocon-associated protein subunit alpha|organism=Schmidtea mediterranea sexual|type=transcript|length=1072bpback to top protein sequence of SMED30012282-orf-1 >SMED30012282-orf-1 ID=SMED30012282-orf-1|Name=SMED30012282-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=186bp MDNNKDYKLDYVEGFLRYPSDYSYYLQNFTSRHLDVTIEPKREATVFYSFback to top protein sequence of SMED30012282-orf-2 >SMED30012282-orf-2 ID=SMED30012282-orf-2|Name=SMED30012282-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=144bp SLFRVVVALTWCIMFYKALFFLFLISAPFIKAQSNEDPISASSVESDEEDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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