Coatomer subunit delta

Overview
NameCoatomer subunit delta
Smed IDSMED30012276
Length (bp)1720
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Coatomer subunit delta (SMED30012276) t-SNE clustered cells

Violin plots show distribution of expression levels for Coatomer subunit delta (SMED30012276) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Coatomer subunit delta (SMED30012276) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Coatomer subunit delta (SMED30012276) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30012276

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30012276SMESG000080903.1 dd_Smed_v4_1961_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30012276SMESG000080903.1 dd_Smed_v4_1961_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30012276SMESG000080903.1 dd_Smed_v4_1961_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30012276SMESG000080903.1 dd_Smed_v4_1961_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30012276SMESG000080903.1 dd_Smed_v4_1961_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
testisSMED30012276SMESG000080903.1 Contig6110uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30012276SMESG000080903.1 Contig6110newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Human
Match: ARCN1 (archain 1 [Source:HGNC Symbol;Acc:HGNC:649])

HSP 1 Score: 496.893 bits (1278), Expect = 2.580e-171
Identity = 278/535 (51.96%), Postives = 369/535 (68.97%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+      KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRT------SEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Human
Match: ARCN1 (archain 1 [Source:HGNC Symbol;Acc:HGNC:649])

HSP 1 Score: 494.197 bits (1271), Expect = 1.204e-169
Identity = 277/534 (51.87%), Postives = 368/534 (68.91%), Query Frame = 1 
Query:   76 VLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            VLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+      KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:   43 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRT------SEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 552
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Human
Match: ARCN1 (archain 1 [Source:HGNC Symbol;Acc:HGNC:649])

HSP 1 Score: 357.836 bits (917), Expect = 4.113e-118
Identity = 206/434 (47.47%), Postives = 287/434 (66.13%), Query Frame = 1 
Query:  376 VIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            +IPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+      KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGPS----KALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRT------SEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 423
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Human
Match: ARCN1 (archain 1 [Source:HGNC Symbol;Acc:HGNC:649])

HSP 1 Score: 247.669 bits (631), Expect = 1.085e-78
Identity = 121/163 (74.23%), Postives = 138/163 (84.66%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVREN 561
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE 
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRET 150
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Human
Match: ARCN1 (archain 1 [Source:HGNC Symbol;Acc:HGNC:649])

HSP 1 Score: 85.1149 bits (209), Expect = 1.109e-19
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVR 276
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETES+R
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESIR 55
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Celegans
Match: copd-1 (Probable coatomer subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q09236])

HSP 1 Score: 392.119 bits (1006), Expect = 1.128e-130
Identity = 224/535 (41.87%), Postives = 330/535 (61.68%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFV-EMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRE-NXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPK-PLSGNAMRLGGK-THVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAA--QLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV 1659
            MVL+AA I SK GK L++RQFV +M R+R+EGL+ AFPKLIG + + +         +QHTFVET+SVRYVY PL+ +Y++L+TTK SNILEDLETLRLF +VIPEY RS +E +I  + FD+IFAFDE+V LGYRE+VNLAQIRTFT+MDSHEE+VF+ ++E  ++   +   +   +  +A++E      +P Y ++   SS+++      P AA  +  P       + S PK P+ G      G  T+  D+F+D L+ +G ++    +    G   S +  + +A     E V VR +EK+    S + GL + E+   + L + + E   +S+K+N G AA  QLQ HPN+DKK +Q+SS L+ K   K +PV  D+G+LKW++   EE+Q+P+  NCWP +++ G  VNIEY LQ++ + L  V I +PLP+ + AP V E DGEY     K  + W L  ID  N +G++EF   NG  + FFP+ V F S   F  + + +V+ +  + + +  ET+F +E +EIV
Sbjct:    1 MVLIAACILSKTGKLLVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAA--------TRQHTFVETDSVRYVYHPLDNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIFAFDEVVTLGYRESVNLAQIRTFTEMDSHEERVFMQIKEAQEKAAKQAMAEKAKELKRAQKEALSRGLKPSYQSSTGISSSST------PNAAA-VSEPAA----PRPSAPKGPIGGGKALKLGGKTNNEDDFLDTLRQQGQSIAPVQKASLSGGVSSLAAPISTAPRVKREVVHVRTEEKINTRVSRDGGLESGEVQATVTLSIGSPEFIPISIKMNNGSAAGTQLQVHPNLDKKEWQSSSTLKIKPNGKPYPVNSDVGILKWKMALSEEEQLPISFNCWPQESSDGVQVNIEYTLQREDITLNNVRIIVPLPT-ATAPSVGECDGEYEYHKTKNVIVWSLAVIDSSNSSGTLEFSVPNGHCDHFFPVSVGFTSENLFVPITVQKVVKNDGSPVTYSVETTFNSENFEIV 515
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Celegans
Match: copd-1 (Probable coatomer subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q09236])

HSP 1 Score: 392.119 bits (1006), Expect = 1.128e-130
Identity = 224/535 (41.87%), Postives = 330/535 (61.68%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFV-EMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRE-NXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPK-PLSGNAMRLGGK-THVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAA--QLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV 1659
            MVL+AA I SK GK L++RQFV +M R+R+EGL+ AFPKLIG + + +         +QHTFVET+SVRYVY PL+ +Y++L+TTK SNILEDLETLRLF +VIPEY RS +E +I  + FD+IFAFDE+V LGYRE+VNLAQIRTFT+MDSHEE+VF+ ++E  ++   +   +   +  +A++E      +P Y ++   SS+++      P AA  +  P       + S PK P+ G      G  T+  D+F+D L+ +G ++    +    G   S +  + +A     E V VR +EK+    S + GL + E+   + L + + E   +S+K+N G AA  QLQ HPN+DKK +Q+SS L+ K   K +PV  D+G+LKW++   EE+Q+P+  NCWP +++ G  VNIEY LQ++ + L  V I +PLP+ + AP V E DGEY     K  + W L  ID  N +G++EF   NG  + FFP+ V F S   F  + + +V+ +  + + +  ET+F +E +EIV
Sbjct:    1 MVLIAACILSKTGKLLVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAA--------TRQHTFVETDSVRYVYHPLDNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIFAFDEVVTLGYRESVNLAQIRTFTEMDSHEERVFMQIKEAQEKAAKQAMAEKAKELKRAQKEALSRGLKPSYQSSTGISSSST------PNAAA-VSEPAA----PRPSAPKGPIGGGKALKLGGKTNNEDDFLDTLRQQGQSIAPVQKASLSGGVSSLAAPISTAPRVKREVVHVRTEEKINTRVSRDGGLESGEVQATVTLSIGSPEFIPISIKMNNGSAAGTQLQVHPNLDKKEWQSSSTLKIKPNGKPYPVNSDVGILKWKMALSEEEQLPISFNCWPQESSDGVQVNIEYTLQREDITLNNVRIIVPLPT-ATAPSVGECDGEYEYHKTKNVIVWSLAVIDSSNSSGTLEFSVPNGHCDHFFPVSVGFTSENLFVPITVQKVVKNDGSPVTYSVETTFNSENFEIV 515
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Fly
Match: deltaCOP (gene:FBgn0028969 transcript:FBtr0070371)

HSP 1 Score: 432.565 bits (1111), Expect = 4.591e-146
Identity = 260/552 (47.10%), Postives = 358/552 (64.86%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXR--------------ENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNED-----VFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTN-GGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTG-LKIMEVLDSSRNTIQFGSETSFITEKYEIV 1659
            MVL+AAA+ +K+GK +LSRQFVEMT+ RIEGLL AFPKL+                KQHT+VET+SVRYVYQP+EKLY+LL+TTKASNILEDLETLRLF+KVIPEYS SLDE +I EN F++IFAFDEIVALGYRE+VNLAQI+TF +MDSHEEKV+ AVR+ QE++A++KM+ KAKELQ +R               ++ G +      +   SS++ ++S  + + ++D+D        +K +  KP S NA++LGGK+  VD+FVDQLK EG  +         G S +++    +A+AA   D     V ++I++KL +    + G+   E  G+L LR+ ++    + LK+  N  +  QLQTHPN+DK++F++ + +  K+  K FP+  D+G+LKWR  +Q+E  +PL INCWP+    GGC VNIEYEL+ + L+L++V I IPLP N   P V EYDG Y+ D+RK  +QW +P ID  N +GSMEF        DFFP+ VSF S   + G +    V   S   +++ SE+    EKYEIV
Sbjct:    1 MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAG-------------KQHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGPSLGGIGSRSGGFSADGIGSSGVSSSSGASSANTGITSIDVDT------KSKAAASKPASRNALKLGGKSKDVDSFVDQLKNEGEKIANLAPAAPAGGSSAAASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRILLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPMNV-QPSVAEYDGTYNYDSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKYEIV 532
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Fly
Match: deltaCOP (gene:FBgn0028969 transcript:FBtr0301926)

HSP 1 Score: 431.024 bits (1107), Expect = 1.479e-145
Identity = 260/552 (47.10%), Postives = 357/552 (64.67%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXR--------------ENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNED-----VFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTN-GGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTG-LKIMEVLDSSRNTIQFGSETSFITEKYEIV 1659
            MVL+AAA+ +K+GK +LSRQFVEMT+ RIEGLL AFPKL+                KQHT+VET+SVRYVYQP+EKLY+LL+TTKASNILEDLETLRLF+KVIPEYS SLDE +I EN F++IFAFDEIVALGYRE+VNLAQI+TF +MDSHEEKV+ AVR+ QE++A++KM+ KAKELQ +R               ++ G +      +   SS++ ++S  + + ++D+D   K       +  KP S NA++LGGK+  VD+FVDQLK EG  +         G S +++    +A+AA   D     V ++I++KL +    + G+   E  G+L LR+ ++    + LK+  N  +  QLQTHPN+DK++F++ + +  K+  K FP+  D+G+LKWR  +Q+E  +PL INCWP+    GGC VNIEYEL+ + L+L++V I IPLP N   P V EYDG Y+ D+RK  +QW +P ID  N +GSMEF        DFFP+ VSF S   + G +    V   S   +++ SE+    EKYEIV
Sbjct:    1 MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAG-------------KQHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGPSLGGIGSRSGGFSADGIGSSGVSSSSGASSANTGITSIDVDTKSK-------AAAKPASRNALKLGGKSKDVDSFVDQLKNEGEKIANLAPAAPAGGSSAAASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRILLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPMNV-QPSVAEYDGTYNYDSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKYEIV 531
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Zebrafish
Match: arcn1a (archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2])

HSP 1 Score: 470.315 bits (1209), Expect = 4.058e-161
Identity = 265/539 (49.17%), Postives = 363/539 (67.35%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLS------GNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKAL+SRQFVEMTRTR+EGLL AFPKL+ T              KQHTFVETESVRYVYQPLEKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +                        +S +++ +  +    L+  +  KP P          A++L GK   VD+FVD+LK+EG  V         G     S   KS    ++ E V +R++E++ +    + GL NME++G++ LRV+++++  + L +N  +    QLQTHPN+DKK+F   S++  K+ +K+FP+  D+G+LKWR+QT +E  +PL INCWP+++  GC VNIEYELQ  SL+L +VVISIP+PS  GAP++ + DGEY  D+R+  ++W LP ID +N TGS+EF   +GQ  DFFP+ VSF S  ++  +++ +V     ++ +++ +ETSF+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKALVSRQFVEMTRTRVEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPLEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQIRRD----------TERGKKGPGFGGFGSSGMSSSNTAIITDTLIEPEKPKPTPAPVRSTGPSKALKLVGKGKEVDDFVDKLKSEGENVILP------GTGKRPSDASKSLPPPTHTESVHLRVEERITLTCGRDGGLQNMEILGMITLRVSDEKNGRIRLNINNNDKRGVQLQTHPNVDKKLFTLDSVIGLKNPDKSFPLKSDVGVLKWRLQTTDESLIPLTINCWPSESGTGCDVNIEYELQDDSLELNDVVISIPVPSGVGAPVIGDLDGEYRHDSRRNVLEWCLPVIDLKNKTGSLEFSI-SGQPNDFFPVNVSFVSKGSYCDIQVAKVSQVDGDSPVRYSTETSFVVDKYEIL 509
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Zebrafish
Match: arcn1b (archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7])

HSP 1 Score: 469.544 bits (1207), Expect = 1.035e-160
Identity = 273/536 (50.93%), Postives = 371/536 (69.22%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAV-DIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNK--TNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEV-LDSSRNTIQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTR+EGLL AFPKL+ T              KQHTFVET+SVRYVYQPLEKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +MK KAKELQ  R++     R G  + GFG   +S  S  +    + D   P K  +   + +P   S  A++LG K   VD FVD+LK+EG  +      R       +S+  K  Q   N E V +R++EK+ +    + GL NME++G++ L+VA++++  + + VN  +   AQLQTHP++DKK+F   S++  K+ EK+FP+  D+G+LKWR+Q+ +E  +PL INCWP++  +  GC VNIEYELQ + L+L +VVI+IP+PS  GAP+V + DG+Y+ D+RK  ++W LP ID++N +GS+EF   +G+  DFFPI VSF S   F  +++ +V      + ++F SETSF+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRVEGLLAAFPKLMNTG-------------KQHTFVETDSVRYVYQPLEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMKRKAKELQRARQDA---ERAGKKSPGFGGFGSSGMSSITSATIITDTIEPEKPKVAPASVRPSG-SSKALKLGAKGKEVDFFVDKLKSEGENIVTTSAGR------KASEASKVLQPPVNMESVHLRVEEKISLTCGRDGGLQNMEVLGMITLKVADEKNGRIIIVVNNNDKKGAQLQTHPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQSTDESLIPLTINCWPSESGSGSGCDVNIEYELQDEGLELNDVVITIPVPSGVGAPVVGDLDGQYNHDSRKNILEWSLPVIDEKNKSGSLEFSI-DGKPNDFFPINVSFVSKRNFCDIQVAKVTYVEGGSPVKFSSETSFVVDKYEIL 512
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Zebrafish
Match: arcn1b (archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7])

HSP 1 Score: 187.963 bits (476), Expect = 3.649e-56
Identity = 89/186 (47.85%), Postives = 134/186 (72.04%), Query Frame = 1 
Query: 1111 THPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGG--CTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEV-LDSSRNTIQFGSETSFITEKYEIV 1659
            THP++DKK+F   S++  K+ EK+FP+  D+G+LKWR+Q+ +E  +PL INCWP+++  G  C VNIEYELQ + L+L +VVI+IP+PS  GAP+V + DG+Y+ D+RK  ++W LP ID++N +GS+EF   +G+  DFFPI VSF S   F  +++ +V      + ++F SETSF+ +KYEI+
Sbjct:    2 THPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQSTDESLIPLTINCWPSESGSGSGCDVNIEYELQDEGLELNDVVITIPVPSGVGAPVVGDLDGQYNHDSRKNILEWSLPVIDEKNKSGSLEFSI-DGKPNDFFPINVSFVSKRNFCDIQVAKVTYVEGGSPVKFSSETSFVVDKYEIL 186
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Xenopus
Match: txn (thioredoxin [Source:Xenbase;Acc:XB-GENE-5895392])

HSP 1 Score: 481.1 bits (1237), Expect = 5.210e-165
Identity = 273/535 (51.03%), Postives = 370/535 (69.16%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRN-TIQFGSETSFITEKYEIV 1659
            +VLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I ++ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G    ++ SN+  S +    I+ P K       S+P   SG A++LG K   VDNFVD+LK+EG T+       T       S+  K      N E V +R++EK+ +  S + GL NME+ G++MLRV + +   + + +   +    QLQTHPN+DKK+F + S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++  GC VNIEYELQ++ L+L +VVI+IPLP+  G+P++ + DG+Y  D+R+  ++W LP ID +N TGS+EF    G   DFFP+ VSF S + +  L + +V     N +++F +ETSF+ +KYEI+
Sbjct:    5 LVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEETEISDHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSGGSSMSNNAVSLITETIIE-PEKTKSAPVPSRPSG-SGKALKLGAKGKEVDNFVDKLKSEGETI------VTPSSGKRQSEVAKVLAPPVNMESVHLRVEEKISLTCSRDGGLQNMEVHGLIMLRVTDDKFGRIRVHIENEDKKGVQLQTHPNVDKKLFTSDSVIGLKNPEKSFPLNSDVGVLKWRLQTTDESFIPLTINCWPSESGNGCDVNIEYELQEERLELNDVVITIPLPAGVGSPVIGDIDGDYHHDSRRNTLEWTLPVIDSKNKTGSLEFSIA-GHPNDFFPVTVSFVSKKNYCSLHVTKVTQVDGNSSVRFSTETSFLVDKYEIL 517
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Xenopus
Match: txn (thioredoxin [Source:Xenbase;Acc:XB-GENE-5895392])

HSP 1 Score: 481.485 bits (1238), Expect = 1.008e-164
Identity = 275/541 (50.83%), Postives = 372/541 (68.76%), Query Frame = 1 
Query:   55 TF*IIKMVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRN-TIQFGSETSFITEKYEIV 1659
            TF  +  VLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I ++ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G    ++ SN+  S +    I+ P K       S+P   SG A++LG K   VDNFVD+LK+EG T+       T       S+  K      N E V +R++EK+ +  S + GL NME+ G++MLRV + +   + + +   +    QLQTHPN+DKK+F + S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++  GC VNIEYELQ++ L+L +VVI+IPLP+  G+P++ + DG+Y  D+R+  ++W LP ID +N TGS+EF    G   DFFP+ VSF S + +  L + +V     N +++F +ETSF+ +KYEI+
Sbjct:   27 TFSFLIQVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEETEISDHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSGGSSMSNNAVSLITETIIE-PEKTKSAPVPSRPSG-SGKALKLGAKGKEVDNFVDKLKSEGETI------VTPSSGKRQSEVAKVLAPPVNMESVHLRVEEKISLTCSRDGGLQNMEVHGLIMLRVTDDKFGRIRVHIENEDKKGVQLQTHPNVDKKLFTSDSVIGLKNPEKSFPLNSDVGVLKWRLQTTDESFIPLTINCWPSESGNGCDVNIEYELQEERLELNDVVITIPLPAGVGSPVIGDIDGDYHHDSRRNTLEWTLPVIDSKNKTGSLEFSIA-GHPNDFFPVTVSFVSKKNYCSLHVTKVTQVDGNSSVRFSTETSFLVDKYEIL 545
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Xenopus
Match: txn (thioredoxin [Source:Xenbase;Acc:XB-GENE-5895392])

HSP 1 Score: 463.381 bits (1191), Expect = 1.609e-158
Identity = 263/507 (51.87%), Postives = 351/507 (69.23%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKI 1578
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I ++ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G    ++ SN+  S +    I+ P K       S+P   SG A++LG K   VDNFVD+LK+EG T+       T       S+  K      N E V +R++EK+ +  S + GL NME+ G++MLRV + +   + + +   +    QLQTHPN+DKK+F + S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++  GC VNIEYELQ++ L+L +VVI+IPLP+  G+P++ + DG+Y  D+R+  ++W LP ID +N TGS+EF    G   DFFP+ VSF S + +  L +
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEETEISDHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSGGSSMSNNAVSLITETIIE-PEKTKSAPVPSRPSG-SGKALKLGAKGKEVDNFVDKLKSEGETI------VTPSSGKRQSEVAKVLAPPVNMESVHLRVEEKISLTCSRDGGLQNMEVHGLIMLRVTDDKFGRIRVHIENEDKKGVQLQTHPNVDKKLFTSDSVIGLKNPEKSFPLNSDVGVLKWRLQTTDESFIPLTINCWPSESGNGCDVNIEYELQEERLELNDVVITIPLPAGVGSPVIGDIDGDYHHDSRRNTLEWTLPVIDSKNKTGSLEFSIA-GHPNDFFPVTVSFVSKKNYCSLHV 485
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Mouse
Match: Arcn1 (archain 1 [Source:MGI Symbol;Acc:MGI:2387591])

HSP 1 Score: 496.123 bits (1276), Expect = 4.227e-171
Identity = 278/535 (51.96%), Postives = 370/535 (69.16%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+   +  KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSNMGKRT------SEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. UniProt/SwissProt
Match: sp|P48444|COPD_HUMAN (Coatomer subunit delta OS=Homo sapiens OX=9606 GN=ARCN1 PE=1 SV=1)

HSP 1 Score: 496.893 bits (1278), Expect = 1.239e-170
Identity = 278/535 (51.96%), Postives = 369/535 (68.97%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+      KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRT------SEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. UniProt/SwissProt
Match: sp|Q5XJY5|COPD_MOUSE (Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2)

HSP 1 Score: 496.123 bits (1276), Expect = 2.957e-170
Identity = 278/535 (51.96%), Postives = 370/535 (69.16%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+   +  KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSNMGKRT------SEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. UniProt/SwissProt
Match: sp|Q5RA77|COPD_PONAB (Coatomer subunit delta OS=Pongo abelii OX=9601 GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 495.738 bits (1275), Expect = 3.839e-170
Identity = 277/535 (51.78%), Postives = 369/535 (68.97%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+      KRT      S  +   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRT------SEASKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. UniProt/SwissProt
Match: sp|Q66H80|COPD_RAT (Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 494.582 bits (1272), Expect = 1.164e-169
Identity = 277/535 (51.78%), Postives = 369/535 (68.97%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+   +  KRT      S      A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSNMGKRT------SEAAKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. UniProt/SwissProt
Match: sp|P53619|COPD_BOVIN (Coatomer subunit delta OS=Bos taurus OX=9913 GN=ARCN1 PE=1 SV=1)

HSP 1 Score: 494.197 bits (1271), Expect = 1.561e-169
Identity = 277/535 (51.78%), Postives = 369/535 (68.97%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG  +   +  KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSTVSGGSTTSMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGENIISSNMGKRT------SEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. TrEMBL
Match: K7GB54 (Coatomer subunit delta OS=Pelodiscus sinensis OX=13735 GN=ARCN1 PE=3 SV=1)

HSP 1 Score: 498.049 bits (1281), Expect = 1.471e-168
Identity = 277/534 (51.87%), Postives = 371/534 (69.48%), Query Frame = 1 
Query:   76 VLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNL--GEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            VLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  + +       ++ + P      A+ S P      A++LG K   VDNFVD+LK+EG  +       T  +   SS+  K   A  N E V ++I+EK+ +    + GL NMEL G++MLR+ +++ S + L V     +  QLQTHPN+DKK+F   S+L  K+ EK+FP+  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ++SL+L +VVI+IPLPS+ GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +K+ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGTTAAMITETIIETEKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGENI------MTSSVGKRSSEAAKVLAAPINMESVHMKIEEKISLTCGRDGGLQNMELHGMIMLRILDEKFSRIRLHVENEDKKGIQLQTHPNVDKKLFTAESLLGLKNPEKSFPINSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEESLELNDVVITIPLPSSVGAPVIGEIDGEYRHDSRRNLLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIKVTKVTQVDGNSPVRFSTETTFLVDKYEIL 510
[Close]
BLAST of Coatomer subunit delta vs. TrEMBL
Match: G3TXP6 (Coatomer subunit delta OS=Loxodonta africana OX=9785 GN=ARCN1 PE=3 SV=1)

HSP 1 Score: 497.664 bits (1280), Expect = 2.300e-168
Identity = 278/534 (52.06%), Postives = 369/534 (69.10%), Query Frame = 1 
Query:   76 VLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVT-VEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            VLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T V     KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F T S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +V+I+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIVSSNTGKRT------SEATKAHAPPINTESVHMKIEEKITLTCGRDGGLHNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTTESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. TrEMBL
Match: H0W849 (Coatomer subunit delta OS=Cavia porcellus OX=10141 GN=ARCN1 PE=3 SV=2)

HSP 1 Score: 497.664 bits (1280), Expect = 2.325e-168
Identity = 276/534 (51.69%), Postives = 370/534 (69.29%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+   +  R      +S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F + S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSNMGRR-----TSETTKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTSESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. TrEMBL
Match: A0A3Q2IE84 (Coatomer subunit delta OS=Equus caballus OX=9796 GN=ARCN1 PE=3 SV=1)

HSP 1 Score: 497.278 bits (1279), Expect = 2.890e-168
Identity = 278/535 (51.96%), Postives = 372/535 (69.53%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+   +  KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V  +  +  QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+++L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIVSSNMGKRT------SEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENDDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEENLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. TrEMBL
Match: A0A2K6G1C7 (Coatomer subunit delta OS=Propithecus coquereli OX=379532 GN=ARCN1 PE=3 SV=1)

HSP 1 Score: 497.278 bits (1279), Expect = 3.119e-168
Identity = 278/535 (51.96%), Postives = 370/535 (69.16%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKD-EKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVETESVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R+L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G  + +  S +       ++ D P      A+ S P      A++LG K   VDNFVD+LK+EG T+   +  KRT      S  T   A   + E V ++I+EK+ +    + GL NMEL G++MLR+++ +   + L V   +    QLQTHPN+DKK+F   S++  K+ EK+FPV  D+G+LKWR+QT EE  +PL INCWP+++  GC VNIEYELQ+ +L+L +VVI+IPLPS  GAP++ E DGEY  D+R+  ++W LP ID +N +GS+EF    GQ  DFFP+ VSF S + +  +++ +V     N+ ++F +ET+F+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP----SKALKLGAKGKEVDNFVDKLKSEGETIMSSNMGKRT------SEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESCIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVEGNSPVRFSTETTFLVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Cavefish
Match: arcn1b (coatomer subunit delta [Source:NCBI gene;Acc:103030893])

HSP 1 Score: 481.1 bits (1237), Expect = 2.298e-165
Identity = 265/535 (49.53%), Postives = 365/535 (68.22%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVET+SVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FDIIFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EA  +M+ KAKELQ  R +  + G   PG+G  G    +  S +     + ++ + P       + S P      A++LG K   VDNFVD+LK+EG  +      + +      S+  K  Q   N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L +N  +    QLQTHPN+DKK+F   S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++   C VNIEYELQ + L+L +V+I+IP+PS  GAP++ + DGEY  D+RK  ++W LP ID+ N +GS+EF    G+  DFFP+ VSF S   ++ +++ +V+     + +++ SETSF+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMSTG-------------KQHTFVETDSVRYVYQPMEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDIIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREANAEMRRKAKELQQARRDAERAGKKAPGFGGFGSTGMSGVSPATIITESMMEPEKPKMAPAPVRPSGP----SKALKLGAKGKEVDNFVDKLKSEGENIIMHSAGKKQ------SEASKVLQPPVNTESVHLRMEEKISLTCGRDGGLQNMEILGMITLRVSDDKNGRIRLHINNNDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPLNSDVGVLKWRLQTTDESLIPLTINCWPSESGSNCDVNIEYELQDEGLELNDVIITIPVPSGVGAPVIGDIDGEYRHDSRKNILEWCLPVIDENNKSGSLEFSIA-GKPNDFFPVNVSFVSRRCYSDIQVAKVVQVEEGSPVKYSSETSFVVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Cavefish
Match: arcn1b (coatomer subunit delta [Source:NCBI gene;Acc:103030893])

HSP 1 Score: 481.1 bits (1237), Expect = 2.298e-165
Identity = 265/535 (49.53%), Postives = 365/535 (68.22%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVET+SVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FDIIFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EA  +M+ KAKELQ  R +  + G   PG+G  G    +  S +     + ++ + P       + S P      A++LG K   VDNFVD+LK+EG  +      + +      S+  K  Q   N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L +N  +    QLQTHPN+DKK+F   S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++   C VNIEYELQ + L+L +V+I+IP+PS  GAP++ + DGEY  D+RK  ++W LP ID+ N +GS+EF    G+  DFFP+ VSF S   ++ +++ +V+     + +++ SETSF+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMSTG-------------KQHTFVETDSVRYVYQPMEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDIIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREANAEMRRKAKELQQARRDAERAGKKAPGFGGFGSTGMSGVSPATIITESMMEPEKPKMAPAPVRPSGP----SKALKLGAKGKEVDNFVDKLKSEGENIIMHSAGKKQ------SEASKVLQPPVNTESVHLRMEEKISLTCGRDGGLQNMEILGMITLRVSDDKNGRIRLHINNNDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPLNSDVGVLKWRLQTTDESLIPLTINCWPSESGSNCDVNIEYELQDEGLELNDVIITIPVPSGVGAPVIGDIDGEYRHDSRKNILEWCLPVIDENNKSGSLEFSIA-GKPNDFFPVNVSFVSRRCYSDIQVAKVVQVEEGSPVKYSSETSFVVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Cavefish
Match: arcn1b (coatomer subunit delta [Source:NCBI gene;Acc:103030893])

HSP 1 Score: 481.1 bits (1237), Expect = 2.298e-165
Identity = 265/535 (49.53%), Postives = 365/535 (68.22%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVET+SVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FDIIFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EA  +M+ KAKELQ  R +  + G   PG+G  G    +  S +     + ++ + P       + S P      A++LG K   VDNFVD+LK+EG  +      + +      S+  K  Q   N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L +N  +    QLQTHPN+DKK+F   S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++   C VNIEYELQ + L+L +V+I+IP+PS  GAP++ + DGEY  D+RK  ++W LP ID+ N +GS+EF    G+  DFFP+ VSF S   ++ +++ +V+     + +++ SETSF+ +KYEI+
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMSTG-------------KQHTFVETDSVRYVYQPMEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDIIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREANAEMRRKAKELQQARRDAERAGKKAPGFGGFGSTGMSGVSPATIITESMMEPEKPKMAPAPVRPSGP----SKALKLGAKGKEVDNFVDKLKSEGENIIMHSAGKKQ------SEASKVLQPPVNTESVHLRMEEKISLTCGRDGGLQNMEILGMITLRVSDDKNGRIRLHINNNDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPLNSDVGVLKWRLQTTDESLIPLTINCWPSESGSNCDVNIEYELQDEGLELNDVIITIPVPSGVGAPVIGDIDGEYRHDSRKNILEWCLPVIDENNKSGSLEFSIA-GKPNDFFPVNVSFVSRRCYSDIQVAKVVQVEEGSPVKYSSETSFVVDKYEIL 511
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Cavefish
Match: arcn1b (coatomer subunit delta [Source:NCBI gene;Acc:103030893])

HSP 1 Score: 460.299 bits (1183), Expect = 2.001e-157
Identity = 254/521 (48.75%), Postives = 353/521 (67.75%), Query Frame = 1 
Query:  115 ALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            +++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVET+SVRYVYQP+EKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FDIIFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EA  +M+ KAKELQ  R +  + G   PG+G  G    +  S +     + ++ + P       + S P      A++LG K   VDNFVD+LK+EG  +      + +      S+  K  Q   N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L +N  +    QLQTHPN+DKK+F   S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++   C VNIEYELQ + L+L +V+I+IP+PS  GAP++ + DGEY  D+RK  ++W LP ID+ N +GS+EF    G+  DFFP+ VSF S   ++ +++ +V+     + +++ SETSF+ +KYEI+
Sbjct:    2 SIVSRQFVEMTRTRIEGLLAAFPKLMSTG-------------KQHTFVETDSVRYVYQPMEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDIIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREANAEMRRKAKELQQARRDAERAGKKAPGFGGFGSTGMSGVSPATIITESMMEPEKPKMAPAPVRPSGP----SKALKLGAKGKEVDNFVDKLKSEGENIIMHSAGKKQ------SEASKVLQPPVNTESVHLRMEEKISLTCGRDGGLQNMEILGMITLRVSDDKNGRIRLHINNNDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPLNSDVGVLKWRLQTTDESLIPLTINCWPSESGSNCDVNIEYELQDEGLELNDVIITIPVPSGVGAPVIGDIDGEYRHDSRKNILEWCLPVIDENNKSGSLEFSIA-GKPNDFFPVNVSFVSRRCYSDIQVAKVVQVEEGSPVKYSSETSFVVDKYEIL 498
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Cavefish
Match: arcn1a (archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2])

HSP 1 Score: 436.417 bits (1121), Expect = 2.422e-148
Identity = 253/517 (48.94%), Postives = 344/517 (66.54%), Query Frame = 1 
Query:  121 LSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGE--AAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNT-IQFGSETSFITEKYEIV 1659
            +SRQFVEMTRTR+EGLL AFPKL+ T              KQHTFVETESVRYVYQPLEKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +     +         SS++SS++       ++ + P      A+ S P      A++LG +   VD+FVD+LK+EG  +   +  +        S   KS  A  N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L +N  +    QLQTHPN+DKK+F   SI+  K+ +K+FP+  D+G+LKWR+Q+ +E  +PL INCWP+++  GC VNIEYELQ+ SL+L +VVISIP+PS  GAP++ + DGEY  D+R+             N TGS+EF    GQ  DFFP+ VSF S   +  +++ +V     N+ ++F +ETSF+ +KYEI+
Sbjct:    1 VSRQFVEMTRTRVEGLLAAFPKLMNTG-------------KQHTFVETESVRYVYQPLEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERGKKSPGFGGFGSSSSSSSSTAIITDTLIEPEKPKPTPAPARPSGP----SKALKLGARGKEVDDFVDKLKSEGENIILPNTGK------RPSDATKSLPAPVNTESVHLRVEEKITLTCGRDGGLQNMEVLGMITLRVSDDKNGRIRLLINNNDKRGVQLQTHPNVDKKLFTADSIIGLKNPDKSFPLNNDVGVLKWRLQSTDESLIPLTINCWPSESGSGCDVNIEYELQEDSLELNDVVISIPIPSGVGAPVIGDLDGEYRHDSRRN------------NKTGSLEFSIA-GQPNDFFPVNVSFVSKGNYCDIQVSKVYQVDGNSPVRFSTETSFVVDKYEIL 481
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Yeast
Match: RET2 (Delta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER [Source:SGD;Acc:S000001947])

HSP 1 Score: 134.42 bits (337), Expect = 3.555e-34
Identity = 65/157 (41.40%), Postives = 104/157 (66.24%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVAL-GYRENVNLAQIRTFTDMDSHEEKV 540
            MV+LAA+I ++ GK LLSRQF ++++ R+  LL+ F  L+             +    HTFVE + VRYVY+P +  Y++L+T + SNI++DL TL LF++ I  Y  S  + +I  N F+I+ +FDEIV++ GY+EN++  Q++T+  M+SHEE++
Sbjct:    1 MVVLAASITTRQGKPLLSRQFKDLSKDRVLELLSNFQNLVS------------EISSDHTFVEDKHVRYVYRPFDNYYIILITNRQSNIIKDLATLNLFSQTINSYLSSFQDQEIFHNAFEILSSFDEIVSMGGYKENLSFTQVQTYLSMESHEERI 145

HSP 2 Score: 84.7297 bits (208), Expect = 7.776e-18
Identity = 72/264 (27.27%), Postives = 125/264 (47.35%), Query Frame = 1 
Query:  892 GISGSSSQTMKSAQAAS--NEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVN-----LGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVG-QDIGLLKWRIQTQEEDQ--MPLIINCW--PNKTNGGCTVNIEYELQKKSLKLEEVVISIPL-PSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDE------------NCTGSMEFETKNGQVEDFFPIIVSFNS------METFTGLKIMEVL 1590
             IS +SS T    +     N  + + I E +  E+S +  + + EL G+L LR+ + + S  +LK+        ++ Q +THPNIDK+ F ++ ++  +   KAFP   Q +G+L+WR     ED   +PL +  W  P+++  G  V IEYE   ++ +L +V+ +IP+ P     P+    +     DA        + N+D E            N  G++ F  +    +  +P+ VSF         ++FTG+ I  V+
Sbjct:  269 AISSASSGTPPPPEEDVPENNGILISIKEVINAEFSRDGTIHSSELKGVLELRINDHDLSHSNLKLADSIDVRDKSFQFKTHPNIDKQSFLSTKLISLRDKSKAFPANDQSLGVLRWRKVAPAEDDSLIPLTLTTWVSPSESQQGFDVIIEYESVLET-ELADVIFTIPVFPQE---PVDINTESSTCSDAE-------VVNMDQEMGTSIKISKIAANDAGALAFTIEAPYEDALYPMTVSFQESTRDKLAKSFTGMAIQSVV 521
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Nematostella
Match: EDO33668 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRJ1])

HSP 1 Score: 466.077 bits (1198), Expect = 7.737e-160
Identity = 273/537 (50.84%), Postives = 363/537 (67.60%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXR----ENKGGNYR-PGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLD-SSRNTIQFGSETSFITEKYEIV 1659
            MVLLAAAI +K+GKA++SRQFVEMTR+RIEGLL+AFPKL+ +            + KQHTFVETESVRYVYQPLEKLY+LL+TTK SNILEDLETLRLF++VIPEY R+++E +I E+ F++IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVR+ QE+EAKE+MK +AKELQA +    + +GG    PG+G  G  S+ +  +S    +  V I  P      +  S+P   SG AM+LG K+  VD+FVD+L++EG  V    +K       S +Q   +A   +   V ++ +EK+ +    + GL NME+ GI++LR+++ + + + L V  N  +  Q+QTHPN+DKK F   +IL  K A K+FP   DIGLL+WR+QT +E  MPL INCWP++ +G C VNIEYEL    L+L +VVI+IP+P   G P+V E DGEY  + +++ + W +P ID  N +GSMEF    GQ  DFFP+ VSF S +T+  LKI+ V        ++F  E  F  +KYE V
Sbjct:    1 MVLLAAAICTKNGKAIISRQFVEMTRSRIEGLLSAFPKLMTSGS----------SVKQHTFVETESVRYVYQPLEKLYMLLITTKHSNILEDLETLRLFSRVIPEYCRAMEESEIGEHAFELIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFQAVRQTQEREAKEEMKKRAKELQAAKVAAAKGRGGRVAMPGFGGMGSSSTKSDISSGN--MDTVPIIDPTPAPKPSYPSRPAG-SGKAMKLGSKSKDVDSFVDKLRSEGTEVISHKQK-------SLAQKPAAAPVVNQSSVHLKTEEKITLTAGRDGGLQNMEIRGIVLLRISDSQFAQIKLAVENNDDKGFQIQTHPNVDKKSFAQDNILVLKQAGKSFPTNSDIGLLRWRMQTTDESLMPLSINCWPSENDGQCDVNIEYELLVDGLELNDVVITIPVPHGVGGPVVGEIDGEYHYNHKQSTLGWQVPVIDASNKSGSMEFSIA-GQPGDFFPVTVSFFSSKTYCDLKIISVSQVQGGEPVKFSQEVQFTVDKYEFV 516
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Nematostella
Match: EDO29214 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T498])

HSP 1 Score: 241.121 bits (614), Expect = 2.861e-74
Identity = 118/162 (72.84%), Postives = 140/162 (86.42%), Query Frame = 1 
Query:   76 VLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVREN 561
            VLLAAAI +K+GKA++SRQFVEMTR+RIEGLL+AFPKL+ +            + KQHTFVETESVRYVYQPLEKLY+LL+TTK SNILEDLETLRLF++VIPEY R+++E +I E+ F++IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVR+ 
Sbjct:    4 VLLAAAICTKNGKAIISRQFVEMTRSRIEGLLSAFPKLMTSGS----------SVKQHTFVETESVRYVYQPLEKLYMLLITTKHSNILEDLETLRLFSRVIPEYCRAMEESEIGEHAFELIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFQAVRQG 155

HSP 2 Score: 150.214 bits (378), Expect = 2.623e-40
Identity = 88/239 (36.82%), Postives = 126/239 (52.72%), Query Frame = 1 
Query:  952 VFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLD-SSRNTIQFGSETSFITEKYEIV 1659
            V ++ +EK+ +    + GL NME+ GI++LR+++ + + + L V  N  +  Q+QTHPN+DKK F   +IL  K A K+FP   DIGLL+WR+QT +E  MPL                                 SIP     G P+V E DGEY  + +++ + W +P ID  N +GSMEF    GQ  DFFP+ VSF S +T+  LKI+ V        ++F  E  F  +KYE V
Sbjct:  181 VHLKTEEKITLTAGRDGGLQNMEIRGIVLLRISDSQFAQIKLAVENNDDKGFQIQTHPNVDKKSFAQDNILVLKQAGKSFPTNSDIGLLRWRMQTTDESLMPL--------------------------------SSIP-----GGPVVGEIDGEYHYNHKQSTLDWQVPVIDASNKSGSMEFSIA-GQPGDFFPVTVSFFSSKTYCDLKIISVSQVQGGEPVKFSQEVQFTVDKYEFV 381
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Medaka
Match: arcn1b (archain 1 [Source:NCBI gene;Acc:101158127])

HSP 1 Score: 479.559 bits (1233), Expect = 9.883e-165
Identity = 274/534 (51.31%), Postives = 368/534 (68.91%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLD-SSRNTIQFGSETSFITEKYEI 1656
            MVLLAAA+ +K GKA++SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVET+SVRYVYQPLEKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G G  ++ S+        V+ + P       ++S P      A++LG K   VDNFVDQLK+EG T+    ++         S   K+     N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L V  N  +  QLQTHPN+DKK+F + S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++  GC VNIEYELQ++SL+L +VVISIP+PS  GAP++ + DGEY  D+R+  ++W LP ID  N TGS+EF +  GQ  DFFPI V+F S  ++  +++ +V        ++F +ETSF+ +KY I
Sbjct:    1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETDSVRYVYQPLEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERSGKKAPGFGGFGSGGMSSVSSGSIITDNIVEPEKPKMTPAPLRSSGP----SRALKLGAKGKEVDNFVDQLKSEGETIMPTGKR--------GSDVSKALPPPINVESVHLRVEEKISLSCGRDGGLQNMEVIGMVTLRVSDDKNGRIRLLVSNNDTKGLQLQTHPNVDKKLFTSDSVIGLKNPEKSFPLNNDVGVLKWRLQTTDEALIPLTINCWPSESGSGCDVNIEYELQEESLELNDVVISIPVPSGVGAPVIGDLDGEYKHDSRRNVLEWCLPVIDANNKTGSLEF-SMAGQPNDFFPISVTFVSKRSYCDIQVTKVSQVDGDGAVRFSTETSFVVDKYII 508
[Close]
BLAST of Coatomer subunit delta vs. Ensembl Medaka
Match: arcn1b (archain 1 [Source:NCBI gene;Acc:101158127])

HSP 1 Score: 449.899 bits (1156), Expect = 2.925e-153
Identity = 263/523 (50.29%), Postives = 353/523 (67.50%), Query Frame = 1 
Query:  124 SRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXREN--KGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASN-EDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKV--NLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLP------SNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLD-SSRNTIQFGSETSFITEKYEI 1656
            SRQFVEMTRTRIEGLL AFPKL+ T              KQHTFVET+SVRYVYQPLEKLY++L+TTK SNILEDLETLRLF++VIPEY R L+E +I E+ FD+IFAFDEIVALGYRENVNLAQIRTFT+MDSHEEKVF AVRE QE+EAK +M+ KAKELQ  R +  + G   PG+G  G G  ++ S+        V+ + P       ++S P      A++LG K   VDNFVDQLK+EG T+    ++         S   K+     N E V +R++EK+ +    + GL NME++G++ LRV++ ++  + L V  N  +  QLQTHPN+DKK+F + S++  K+ EK+FP+  D+G+LKWR+QT +E  +PL INCWP+++  GC VNIEYELQ++SL+L +VVISIP+P      S  GAP++ + DGEY  D+R+  ++W LP ID  N TGS+EF +  GQ  DFFPI V+F S  ++  +++ +V        ++F +ETSF+ +KY I
Sbjct:    1 SRQFVEMTRTRIEGLLAAFPKLMNTG-------------KQHTFVETDSVRYVYQPLEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERSGKKAPGFGGFGSGGMSSVSSGSIITDNIVEPEKPKMTPAPLRSSGP----SRALKLGAKGKEVDNFVDQLKSEGETIMPTGKR--------GSDVSKALPPPINVESVHLRVEEKISLSCGRDGGLQNMEVIGMVTLRVSDDKNGRIRLLVSNNDTKGLQLQTHPNVDKKLFTSDSVIGLKNPEKSFPLNNDVGVLKWRLQTTDEALIPLTINCWPSESGSGCDVNIEYELQEESLELNDVVISIPVPIPPAEISGVGAPVIGDLDGEYKHDSRRNVLEWCLPVIDANNKTGSLEF-SMAGQPNDFFPISVTFVSKRSYCDIQVTKVSQVDGDGAVRFSTETSFVVDKYII 497
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BLAST of Coatomer subunit delta vs. Planmine SMEST
Match: SMESG000080903.1 (SMESG000080903.1)

HSP 1 Score: 1005.74 bits (2599), Expect = 0.000e+0
Identity = 527/529 (99.62%), Postives = 528/529 (99.81%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV 1659
            MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENQEKEAKEKMKLKAKELQAKRENKGGNYRPGYGNTGFGSSNASSNSYTSPVAAVDIDLP KNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWR+QTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV
Sbjct:    1 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENQEKEAKEKMKLKAKELQAKRENKGGNYRPGYGNTGFGSSNASSNSYTSPVAAVDIDLPSKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRLQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV 529
[Close]
BLAST of Coatomer subunit delta vs. Planmine SMEST
Match: SMESG000080903.1 (SMESG000080903.1)

HSP 1 Score: 966.837 bits (2498), Expect = 0.000e+0
Identity = 513/529 (96.98%), Postives = 514/529 (97.16%), Query Frame = 1 
Query:   73 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKNKNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENXXXXXXXXXXXXXXXXXXXRENKGGNYRPGYXXXXXXXXXXXXXXXXXPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV 1659
            MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGT              KQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENQEKEAKEKMKLKAKELQAKRENKGGNYRPGYGNTGFGSSNASSNSYTSPVAAVDIDLP KNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWR+QTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV
Sbjct:    1 MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTG-------------KQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFAKVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMDSHEEKVFLAVRENQEKEAKEKMKLKAKELQAKRENKGGNYRPGYGNTGFGSSNASSNSYTSPVAAVDIDLPSKNLLNAKTSKPKPLSGNAMRLGGKTHVVDNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDEKLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPNIDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRLQTQEEDQMPLIINCWPNKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLDARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGLKIMEVLDSSRNTIQFGSETSFITEKYEIV 516
The following BLAST results are available for this feature:
BLAST of Coatomer subunit delta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ARCN12.580e-17151.96archain 1 [Source:HGNC Symbol;Acc:HGNC:649][more]
ARCN11.204e-16951.87archain 1 [Source:HGNC Symbol;Acc:HGNC:649][more]
ARCN14.113e-11847.47archain 1 [Source:HGNC Symbol;Acc:HGNC:649][more]
ARCN11.085e-7874.23archain 1 [Source:HGNC Symbol;Acc:HGNC:649][more]
ARCN11.109e-1964.71archain 1 [Source:HGNC Symbol;Acc:HGNC:649][more]
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BLAST of Coatomer subunit delta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
copd-11.128e-13041.87Probable coatomer subunit delta [Source:UniProtKB... [more]
copd-11.128e-13041.87Probable coatomer subunit delta [Source:UniProtKB... [more]
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BLAST of Coatomer subunit delta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
deltaCOP4.591e-14647.10gene:FBgn0028969 transcript:FBtr0070371[more]
deltaCOP1.479e-14547.10gene:FBgn0028969 transcript:FBtr0301926[more]
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BLAST of Coatomer subunit delta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
arcn1a4.058e-16149.17archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2][more]
arcn1b1.035e-16050.93archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7][more]
arcn1b3.649e-5647.85archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7][more]
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BLAST of Coatomer subunit delta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
txn5.210e-16551.03thioredoxin [Source:Xenbase;Acc:XB-GENE-5895392][more]
txn1.008e-16450.83thioredoxin [Source:Xenbase;Acc:XB-GENE-5895392][more]
txn1.609e-15851.87thioredoxin [Source:Xenbase;Acc:XB-GENE-5895392][more]
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BLAST of Coatomer subunit delta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Arcn14.227e-17151.96archain 1 [Source:MGI Symbol;Acc:MGI:2387591][more]
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BLAST of Coatomer subunit delta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P48444|COPD_HUMAN1.239e-17051.96Coatomer subunit delta OS=Homo sapiens OX=9606 GN=... [more]
sp|Q5XJY5|COPD_MOUSE2.957e-17051.96Coatomer subunit delta OS=Mus musculus OX=10090 GN... [more]
sp|Q5RA77|COPD_PONAB3.839e-17051.78Coatomer subunit delta OS=Pongo abelii OX=9601 GN=... [more]
sp|Q66H80|COPD_RAT1.164e-16951.78Coatomer subunit delta OS=Rattus norvegicus OX=101... [more]
sp|P53619|COPD_BOVIN1.561e-16951.78Coatomer subunit delta OS=Bos taurus OX=9913 GN=AR... [more]
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BLAST of Coatomer subunit delta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
K7GB541.471e-16851.87Coatomer subunit delta OS=Pelodiscus sinensis OX=1... [more]
G3TXP62.300e-16852.06Coatomer subunit delta OS=Loxodonta africana OX=97... [more]
H0W8492.325e-16851.69Coatomer subunit delta OS=Cavia porcellus OX=10141... [more]
A0A3Q2IE842.890e-16851.96Coatomer subunit delta OS=Equus caballus OX=9796 G... [more]
A0A2K6G1C73.119e-16851.96Coatomer subunit delta OS=Propithecus coquereli OX... [more]
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BLAST of Coatomer subunit delta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
arcn1b2.298e-16549.53coatomer subunit delta [Source:NCBI gene;Acc:10303... [more]
arcn1b2.298e-16549.53coatomer subunit delta [Source:NCBI gene;Acc:10303... [more]
arcn1b2.298e-16549.53coatomer subunit delta [Source:NCBI gene;Acc:10303... [more]
arcn1b2.001e-15748.75coatomer subunit delta [Source:NCBI gene;Acc:10303... [more]
arcn1a2.422e-14848.94archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2][more]
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BLAST of Coatomer subunit delta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coatomer subunit delta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
RET23.555e-3441.40Delta subunit of the coatomer complex (COPI); COPI... [more]
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BLAST of Coatomer subunit delta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO336687.737e-16050.84Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO292142.861e-7472.84Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Coatomer subunit delta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
arcn1b9.883e-16551.31archain 1 [Source:NCBI gene;Acc:101158127][more]
arcn1b2.925e-15350.29archain 1 [Source:NCBI gene;Acc:101158127][more]
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BLAST of Coatomer subunit delta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000080903.10.000e+099.62SMESG000080903.1[more]
SMESG000080903.10.000e+096.98SMESG000080903.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30012276 ID=SMED30012276|Name=Coatomer subunit delta|organism=Schmidtea mediterranea sexual|type=transcript|length=1720bp
GTAATTTGTTGTTCGACTTGCAAAATAAAACATTTTGAAATTTGACTTGT
TGGAACATTTTAGATCATAAAAATGGTATTACTAGCAGCTGCTATATTTT
CAAAAGATGGAAAAGCCTTGCTATCAAGACAATTTGTGGAGATGACAAGA
ACTAGAATAGAAGGATTACTCACTGCTTTTCCTAAGTTAATTGGAACTGA
TGATAAGTTATCAGAGAAAAATAAAAATATTCAAAATTGTAAACAACATA
CTTTTGTGGAAACTGAATCCGTAAGATATGTATATCAACCTCTTGAAAAA
CTCTACGTTCTTTTATTAACTACAAAAGCAAGTAATATATTGGAAGATTT
GGAAACGTTGAGATTGTTTGCTAAAGTCATTCCGGAATACTCTAGAAGCT
TAGATGAATATGACATTAAAGAAAATATTTTTGACATAATTTTTGCTTTT
GACGAAATCGTGGCTTTGGGATATCGTGAAAATGTGAATTTAGCACAAAT
TCGTACGTTTACTGATATGGATTCGCACGAGGAGAAGGTTTTCTTGGCTG
TCAGAGAAAATCAAGAAAAAGAAGCCAAAGAAAAAATGAAACTTAAGGCT
AAAGAACTTCAGGCTAAGCGTGAAAATAAAGGAGGCAATTATCGACCAGG
CTATGGTAATACCGGATTTGGAAGTTCTAACGCTTCATCCAATTCTTATA
CTTCTCCAGTTGCTGCAGTTGATATAGATTTGCCTTGTAAGAATTTGTTG
AACGCTAAAACTAGTAAGCCTAAACCGCTGTCTGGAAATGCAATGCGACT
TGGGGGAAAAACACATGTTGTTGATAATTTCGTTGATCAGTTGAAAGCAG
AAGGAGTTACTGTCGAACAGAAAGATGAAAAACGTACCAGAGGAATATCT
GGTTCTTCTAGTCAAACAATGAAATCTGCTCAGGCTGCTTCAAATGAAGA
TGTATTTGTGCGTATTGATGAAAAATTGAAAATCGAATATAGTCATAACG
CTGGATTATCAAATATGGAGCTTATGGGTATTCTCATGTTGCGTGTTGCA
AATAAGGAAAGTAGCATGTTATCTTTAAAGGTTAACCTTGGAGAAGCGGC
TCAATTGCAAACACACCCAAATATCGATAAGAAAATGTTCCAGACTTCAA
GTATTTTGCAACCTAAGTCTGCAGAAAAAGCTTTCCCAGTCGGTCAAGAT
ATCGGTCTTTTAAAATGGCGAATTCAAACTCAAGAAGAAGATCAAATGCC
TCTCATTATTAATTGTTGGCCAAATAAAACCAATGGCGGTTGCACTGTAA
ATATTGAATATGAATTGCAAAAAAAGTCATTGAAGCTTGAAGAAGTTGTT
ATATCAATTCCGCTTCCTTCAAATTCCGGAGCACCAATTGTGAAAGAGTA
TGACGGCGAGTATTCTTTAGATGCTCGCAAGACACATGTTCAATGGGTCT
TGCCGAATATCGATGATGAGAATTGCACTGGTAGCATGGAATTCGAAACC
AAAAATGGTCAAGTTGAGGATTTCTTTCCAATTATAGTTAGTTTCAATTC
GATGGAAACATTTACTGGTCTTAAAATTATGGAAGTATTGGACTCTTCAA
GAAATACAATTCAATTCGGTTCTGAGACGTCGTTTATTACAGAAAAATAT
GAAATTGTTTAAACATAGCTTCTATGTTTATTATTTGGTTTATTTTAATA
AAATTTATTAAAATTAAAAA
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protein sequence of SMED30012276-orf-1

>SMED30012276-orf-1 ID=SMED30012276-orf-1|Name=SMED30012276-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=530bp
MVLLAAAIFSKDGKALLSRQFVEMTRTRIEGLLTAFPKLIGTDDKLSEKN
KNIQNCKQHTFVETESVRYVYQPLEKLYVLLLTTKASNILEDLETLRLFA
KVIPEYSRSLDEYDIKENIFDIIFAFDEIVALGYRENVNLAQIRTFTDMD
SHEEKVFLAVRENQEKEAKEKMKLKAKELQAKRENKGGNYRPGYGNTGFG
SSNASSNSYTSPVAAVDIDLPCKNLLNAKTSKPKPLSGNAMRLGGKTHVV
DNFVDQLKAEGVTVEQKDEKRTRGISGSSSQTMKSAQAASNEDVFVRIDE
KLKIEYSHNAGLSNMELMGILMLRVANKESSMLSLKVNLGEAAQLQTHPN
IDKKMFQTSSILQPKSAEKAFPVGQDIGLLKWRIQTQEEDQMPLIINCWP
NKTNGGCTVNIEYELQKKSLKLEEVVISIPLPSNSGAPIVKEYDGEYSLD
ARKTHVQWVLPNIDDENCTGSMEFETKNGQVEDFFPIIVSFNSMETFTGL
KIMEVLDSSRNTIQFGSETSFITEKYEIV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR027059Coatomer_dsu
IPR036168AP2_Mu_C_sf
IPR028565MHD
IPR022775AP_mu_sigma_su
IPR011012Longin-like_dom_sf
Vocabulary: biological process
TermDefinition
GO:0006810transport
GO:0006890retrograde vesicle-mediated transport, Golgi to ER
GO:0008344adult locomotory behavior
GO:0015031protein transport
GO:0016192vesicle-mediated transport
GO:0021691cerebellar Purkinje cell layer maturation
GO:0043473pigmentation
GO:0048193Golgi vesicle transport
Vocabulary: cellular component
TermDefinition
GO:0000139Golgi membrane
GO:0005737cytoplasm
GO:0005783endoplasmic reticulum
GO:0005794Golgi apparatus
GO:0016020membrane
GO:0030126COPI vesicle coat
GO:0030137COPI-coated vesicle
GO:0030663COPI-coated vesicle membrane
GO:0031410cytoplasmic vesicle
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..185
NoneNo IPR availableGENE3DG3DSA:3.30.450.60coord: 3..153
e-value: 2.4E-14
score: 55.5
NoneNo IPR availableGENE3DG3DSA:2.60.40.1170coord: 290..505
e-value: 5.3E-11
score: 44.5
NoneNo IPR availableGENE3DG3DSA:2.60.40.1170coord: 392..492
e-value: 5.3E-11
score: 44.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..286
NoneNo IPR availablePANTHERPTHR10121:SF0COATOMER SUBUNIT DELTAcoord: 1..529
NoneNo IPR availableCDDcd09254AP_delta-COPI_MHDcoord: 292..526
e-value: 2.03043E-91
score: 277.573
NoneNo IPR availableCDDcd14830Delta_COP_Ncoord: 4..146
e-value: 1.26011E-78
score: 240.499
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 7..143
e-value: 1.7E-7
score: 31.3
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 287..505
e-value: 1.3E-20
score: 73.9
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 291..529
score: 27.713
IPR027059Coatomer delta subunitPANTHERPTHR10121COATOMER SUBUNIT DELTAcoord: 1..529
IPR011012Longin-like domain superfamilySUPERFAMILYSSF64356SNARE-likecoord: 5..154
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILYSSF49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 290..528