Splicing factor 45
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012275 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Splicing factor 45 vs. Ensembl Human
Match: RBM17 (RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]) HSP 1 Score: 154.451 bits (389), Expect = 1.405e-41 Identity = 127/308 (41.23%), Postives = 170/308 (55.19%), Query Frame = 3 Query: 366 DEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK----YDGVEETNDDDIASRVEKRTSDKSR-LVGTAIAPPPSLLE-------------DCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 DEY+P+ PNDYE++ K R++R+ + + + + K K G D D + + R + G AIAPP SL+E D S + P +E D + + + A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EKD ++ + I + V+LLRNMVG GEVD+DL+ ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 98 DEYDPMFPNDYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTE------ILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAE 399
BLAST of Splicing factor 45 vs. Ensembl Human
Match: RBM17 (RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]) HSP 1 Score: 154.451 bits (389), Expect = 1.405e-41 Identity = 127/308 (41.23%), Postives = 170/308 (55.19%), Query Frame = 3 Query: 366 DEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK----YDGVEETNDDDIASRVEKRTSDKSR-LVGTAIAPPPSLLE-------------DCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 DEY+P+ PNDYE++ K R++R+ + + + + K K G D D + + R + G AIAPP SL+E D S + P +E D + + + A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EKD ++ + I + V+LLRNMVG GEVD+DL+ ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 98 DEYDPMFPNDYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTE------ILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAE 399
BLAST of Splicing factor 45 vs. Ensembl Human
Match: PUF60 (poly(U) binding splicing factor 60 [Source:HGNC Symbol;Acc:HGNC:17042]) HSP 1 Score: 88.1965 bits (217), Expect = 5.505e-18 Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+F GR V A YD E+F N +L Sbjct: 427 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 533
BLAST of Splicing factor 45 vs. Ensembl Human
Match: PUF60 (poly(U) binding splicing factor 60 [Source:HGNC Symbol;Acc:HGNC:17042]) HSP 1 Score: 87.8113 bits (216), Expect = 5.802e-18 Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+F GR V A YD E+F N +L Sbjct: 398 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 504
BLAST of Splicing factor 45 vs. Ensembl Human
Match: PUF60 (poly(U) binding splicing factor 60 [Source:HGNC Symbol;Acc:HGNC:17042]) HSP 1 Score: 88.1965 bits (217), Expect = 5.834e-18 Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+F GR V A YD E+F N +L Sbjct: 435 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 541
BLAST of Splicing factor 45 vs. Ensembl Celegans
Match: rbm-17 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:Q20966]) HSP 1 Score: 90.8929 bits (224), Expect = 1.176e-19 Identity = 106/363 (29.20%), Postives = 155/363 (42.70%), Query Frame = 3 Query: 198 TSKLPPVVDLKK-----TIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLG---VKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRV--EKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQA---KYGTTSA-----AAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVD-----DDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +S PPV+DL T F + + NPVS+ A D+ ++ G VK EY P+ PN+YE ++ K + E ++A R+ E DK R G AIAPP L+E E V+ +EN + + +G ++ AA IM + G+KEG GLGK QGMSTAL +E+T RGG I+ E A++ + ++ L N+ EV + E EE K G+VV ++ + +D+ VR+FVEF + A +A V NGR+FGGR VSAG+ + + N E Sbjct: 53 SSAPPPVIDLSTRNRTITTAVTSKSFQPI-----RANPVSDNISFLPKAATDESVMLFGEEHVKCEYYPMTPNNYEVVA-----------------------KEINDRKQREKTAREVAKRLQREHEEEDKKRSKGAAIAPPTMLMEP---------EPEVIKNTNENQDEKPHSSFMPPPSFLPAFGKATSRGLGIAANIMKRHGYKEGAGLGKSEQGMSTALSIEKTGVRGGNIVAEAPKAPTFATNSMEAVQ-------NATKILQLWNLTDLSEVSGEEGKKEFADEIKEEMEKCGQVVNVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGRSVSAGFQNVSDYNNREF 371
BLAST of Splicing factor 45 vs. Ensembl Celegans
Match: rnp-6 (RNP (RRM RNA binding domain) containing [Source:UniProtKB/TrEMBL;Acc:Q9N3S4]) HSP 1 Score: 70.8626 bits (172), Expect = 8.291e-13 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKF 1202 + L+ SNVI+LRNMV P ++D+ L+ E EEC KYG V+ +I + V+IFV++ D RA +GR+FGG V A YD F Sbjct: 648 MTKLMRTNRSNVIVLRNMVTPQDIDEFLEGEIREECGKYGNVIDVVI---ANFASSGLVKIFVKYSDSMQVDRAKAALDGRFFGGNTVKAEAYDQILF 742
BLAST of Splicing factor 45 vs. Ensembl Celegans
Match: uaf-1 (Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]) HSP 1 Score: 51.9878 bits (123), Expect = 6.590e-8 Identity = 34/102 (33.33%), Postives = 47/102 (46.08%), Query Frame = 3 Query: 930 RVSNVILLRNMVGPGEVDDDLQSE-----TAEECSKYGKVVTCMIFE-LQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 R + ++ L NMV E+ D + E +ECSKYG V + I +D P ++FVEF RA GR F R V YYD +K+ N + Sbjct: 42 RATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 143
BLAST of Splicing factor 45 vs. Ensembl Celegans
Match: uaf-1 (Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]) HSP 1 Score: 51.9878 bits (123), Expect = 6.590e-8 Identity = 34/102 (33.33%), Postives = 47/102 (46.08%), Query Frame = 3 Query: 930 RVSNVILLRNMVGPGEVDDDLQSE-----TAEECSKYGKVVTCMIFE-LQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 R + ++ L NMV E+ D + E +ECSKYG V + I +D P ++FVEF RA GR F R V YYD +K+ N + Sbjct: 42 RATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 143
BLAST of Splicing factor 45 vs. Ensembl Celegans
Match: uaf-1 (Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]) HSP 1 Score: 51.9878 bits (123), Expect = 6.590e-8 Identity = 34/102 (33.33%), Postives = 47/102 (46.08%), Query Frame = 3 Query: 930 RVSNVILLRNMVGPGEVDDDLQSE-----TAEECSKYGKVVTCMIFE-LQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 R + ++ L NMV E+ D + E +ECSKYG V + I +D P ++FVEF RA GR F R V YYD +K+ N + Sbjct: 42 RATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 143
BLAST of Splicing factor 45 vs. Ensembl Fly
Match: Spf45 (gene:FBgn0086683 transcript:FBtr0111241) HSP 1 Score: 134.806 bits (338), Expect = 5.165e-35 Identity = 128/338 (37.87%), Postives = 174/338 (51.48%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQI---SXXXXXXXXXXXXXXXXXXXXADSKY-----------------LKYDGV-EETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQ-----------------------------SLISDRVSNVILLRNMVGPGEVDDDLQSETAEEC-SKYGKVVTCMIFE-LQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 V DEY+P PN+YE++ S R +++ + ++ D K LK G NDDD+ + + G IAPPPSL E +I SG C+ A Y +S AAKIM K GFK+G+GLGK QGM+ ALQVE+TS+RGG+IIHEKD+ LA+ ++ Q + I S V+LLRNMVGPG+VD++L+ E +EC +KYG+V + +I E VP+D AV+IFVEF +ESA +AVVD NGR+FGGR V AG+Y+ +KFK +L Sbjct: 51 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRGRVGRREFYRDEVSAPNLKLSGFGHRQNDDDMYLPSPGLVAKQG---GATIAPPPSLQE-MSIDSG----------CE-----------ATNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHESFGTVPED-AVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 362
BLAST of Splicing factor 45 vs. Ensembl Fly
Match: Spf45 (gene:FBgn0086683 transcript:FBtr0111240) HSP 1 Score: 134.42 bits (337), Expect = 6.998e-35 Identity = 128/338 (37.87%), Postives = 174/338 (51.48%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQI---SXXXXXXXXXXXXXXXXXXXXADSKY-----------------LKYDGV-EETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQ-----------------------------SLISDRVSNVILLRNMVGPGEVDDDLQSETAEEC-SKYGKVVTCMIFE-LQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 V DEY+P PN+YE++ S R +++ + ++ D K LK G NDDD+ + + G IAPPPSL E +I SG C+ A Y +S AAKIM K GFK+G+GLGK QGM+ ALQVE+TS+RGG+IIHEKD+ LA+ ++ Q + I S V+LLRNMVGPG+VD++L+ E +EC +KYG+V + +I E VP+D AV+IFVEF +ESA +AVVD NGR+FGGR V AG+Y+ +KFK +L Sbjct: 59 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRGRVGRREFYRDEVSAPNLKLSGFGHRQNDDDMYLPSPGLVAKQG---GATIAPPPSLQE-MSIDSG----------CE-----------ATNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHESFGTVPED-AVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 370
BLAST of Splicing factor 45 vs. Ensembl Fly
Match: Spf45 (gene:FBgn0086683 transcript:FBtr0111239) HSP 1 Score: 134.42 bits (337), Expect = 1.444e-34 Identity = 128/338 (37.87%), Postives = 174/338 (51.48%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQI---SXXXXXXXXXXXXXXXXXXXXADSKY-----------------LKYDGV-EETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQ-----------------------------SLISDRVSNVILLRNMVGPGEVDDDLQSETAEEC-SKYGKVVTCMIFE-LQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 V DEY+P PN+YE++ S R +++ + ++ D K LK G NDDD+ + + G IAPPPSL E +I SG C+ A Y +S AAKIM K GFK+G+GLGK QGM+ ALQVE+TS+RGG+IIHEKD+ LA+ ++ Q + I S V+LLRNMVGPG+VD++L+ E +EC +KYG+V + +I E VP+D AV+IFVEF +ESA +AVVD NGR+FGGR V AG+Y+ +KFK +L Sbjct: 91 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRGRVGRREFYRDEVSAPNLKLSGFGHRQNDDDMYLPSPGLVAKQG---GATIAPPPSLQE-MSIDSG----------CE-----------ATNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHESFGTVPED-AVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 402
BLAST of Splicing factor 45 vs. Ensembl Fly
Match: hfp (gene:FBgn0028577 transcript:FBtr0072709) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-16 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIF---ELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKF 1202 +Q L+ S VI+LRNMVGP +VD+ LQ E EECSK+G V +IF + ++ DD+A V+IFVEF A R +GR+FGGR V A YD F Sbjct: 527 MQRLMRPVDSRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIF 630
BLAST of Splicing factor 45 vs. Ensembl Fly
Match: hfp (gene:FBgn0028577 transcript:FBtr0300416) HSP 1 Score: 80.8777 bits (198), Expect = 5.667e-16 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIF---ELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKF 1202 +Q L+ S VI+LRNMVGP +VD+ LQ E EECSK+G V +IF + ++ DD+A V+IFVEF A R +GR+FGGR V A YD F Sbjct: 435 MQRLMRPVDSRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIF 538
BLAST of Splicing factor 45 vs. Ensembl Zebrafish
Match: rbm17 (RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]) HSP 1 Score: 152.14 bits (383), Expect = 8.299e-41 Identity = 131/327 (40.06%), Postives = 183/327 (55.96%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXX-----------------ADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLE-DCTIMSGND--------IEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEK-----------DXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 + DEY+P+ PNDYE++ K R++R+ +++ + + A S + ++ E+++++ R EKR K G AIAPP SL+E D + D I PV + D + A G T A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EK D + + + ++ + V+LLRNMVG GEVD+DL++ET EEC KYGKVV C+IFE+ V DD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ ++F+ L+L Sbjct: 96 LADEYDPMFPNDYEKVLKRHREERQKQREQERQKEIEEREKKRKERHEGGGGGGAPSGFSRFPTEGESDEEEDYER-EKR---KRTAGGAAIAPPTSLVERDSSFTYDEDGRQRTKAAIPPPVFEDSDRP--RSPPGPANSFLANMGGT-VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKTTGPSQNVANPDGSNSDASKKNETNPLTEILKC-PTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVRCVIFEISGVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDRFRVLDL 414
BLAST of Splicing factor 45 vs. Ensembl Zebrafish
Match: rbm17 (RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]) HSP 1 Score: 152.14 bits (383), Expect = 8.299e-41 Identity = 131/327 (40.06%), Postives = 183/327 (55.96%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXX-----------------ADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLE-DCTIMSGND--------IEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEK-----------DXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 + DEY+P+ PNDYE++ K R++R+ +++ + + A S + ++ E+++++ R EKR K G AIAPP SL+E D + D I PV + D + A G T A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EK D + + + ++ + V+LLRNMVG GEVD+DL++ET EEC KYGKVV C+IFE+ V DD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ ++F+ L+L Sbjct: 96 LADEYDPMFPNDYEKVLKRHREERQKQREQERQKEIEEREKKRKERHEGGGGGGAPSGFSRFPTEGESDEEEDYER-EKR---KRTAGGAAIAPPTSLVERDSSFTYDEDGRQRTKAAIPPPVFEDSDRP--RSPPGPANSFLANMGGT-VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKTTGPSQNVANPDGSNSDASKKNETNPLTEILKC-PTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVRCVIFEISGVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDRFRVLDL 414
BLAST of Splicing factor 45 vs. Ensembl Zebrafish
Match: puf60a (poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]) HSP 1 Score: 88.5817 bits (218), Expect = 2.365e-18 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +Q L+ + S V++LRNMVGP ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ N R+FGGR V A YD E+F N +L Sbjct: 431 MQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDL 536
BLAST of Splicing factor 45 vs. Ensembl Zebrafish
Match: puf60a (poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]) HSP 1 Score: 88.5817 bits (218), Expect = 2.365e-18 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +Q L+ + S V++LRNMVGP ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ N R+FGGR V A YD E+F N +L Sbjct: 431 MQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDL 536
BLAST of Splicing factor 45 vs. Ensembl Zebrafish
Match: puf60a (poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]) HSP 1 Score: 88.5817 bits (218), Expect = 2.534e-18 Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMVGP ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ N R+FGGR V A YD E+F N +L Sbjct: 412 MQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDLS 518
BLAST of Splicing factor 45 vs. Ensembl Xenopus
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:448396]) HSP 1 Score: 160.614 bits (405), Expect = 5.413e-44 Identity = 142/360 (39.44%), Postives = 200/360 (55.56%), Query Frame = 3 Query: 207 LPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQI----------SXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLED--CTIMSGNDIE-----------IPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 L PV+DLK+ E + + V +E V F + + + DEY+P+ PN+YE++ + L +++++E++K + R S + + E D+D KRT + G AIAPP SL+E +I+ D E IP P DE + + + + A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII DL + A ++A + I + V+LL+NMVG GEVD+DL++ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGRIV A +Y+ +KF+ L+L Sbjct: 51 LAPVIDLKRASAAEERQIADPSPH------VGAGIKESVPSGFSAGEVLVPLADEYDPMFPNEYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPESDEDEDYERERRKRT-----MGGAAIAPPTSLMEKDRESIVPAYDDEPRPRPPMAKAAIPP-PMYDEPERPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIII-GDLADKVEAAKKADPNPLTEILKNPTKVVLLQNMVGAGEVDEDLEAETKEECEKYGKVGKCVIFEIPGTPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKACFYNLDKFRTLDL 397
BLAST of Splicing factor 45 vs. Ensembl Xenopus
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:448396]) HSP 1 Score: 150.214 bits (378), Expect = 2.434e-40 Identity = 138/355 (38.87%), Postives = 193/355 (54.37%), Query Frame = 3 Query: 207 LPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQI----------SXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRVEKRT-----SDKSRL---VGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 L PV+DLK+ E + + V +E V F + + + DEY+P+ PN+YE++ + L +++++E++K + R S + + E D+D KRT D+ R + A PPP ++ E P P N + A G T A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII DL + A ++A + I + V+LL+NMVG GEVD+DL++ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGRIV A +Y+ +KF+ L+L Sbjct: 51 LAPVIDLKRASAAEERQIADPSPH------VGAGIKESVPSGFSAGEVLVPLADEYDPMFPNEYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPESDEDEDYERERRKRTIVPAYDDEPRPRPPMAKAAIPPPMY---------DEPERPRSPTGPSN----------SFLANMGGT-VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIII-GDLADKVEAAKKADPNPLTEILKNPTKVVLLQNMVGAGEVDEDLEAETKEECEKYGKVGKCVIFEIPGTPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKACFYNLDKFRTLDL 378
BLAST of Splicing factor 45 vs. Ensembl Xenopus
Match: puf60 (poly(U) binding splicing factor 60KDa [Source:NCBI gene;Acc:100145091]) HSP 1 Score: 84.3445 bits (207), Expect = 6.257e-17 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ NGR+F GR V A YD E+F N +L Sbjct: 354 MQKLMRKQESTVMVLRNMVDPRDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMSSETQKAIQALNGRWFAGRKVVAEVYDQERFDNSDL 459
BLAST of Splicing factor 45 vs. Ensembl Xenopus
Match: puf60 (poly(U) binding splicing factor 60KDa [Source:NCBI gene;Acc:100145091]) HSP 1 Score: 83.5741 bits (205), Expect = 1.417e-16 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ NGR+F GR V A YD E+F N +L Sbjct: 413 MQKLMRKQESTVMVLRNMVDPRDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMSSETQKAIQALNGRWFAGRKVVAEVYDQERFDNSDL 518
BLAST of Splicing factor 45 vs. Ensembl Mouse
Match: Rbm17 (RNA binding motif protein 17 [Source:MGI Symbol;Acc:MGI:1924188]) HSP 1 Score: 152.91 bits (385), Expect = 3.628e-41 Identity = 127/310 (40.97%), Postives = 170/310 (54.84%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK----YDGVEETNDDDIASRVEKRTSDKSR-LVGTAIAPPPSLLE-------------DCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 + DEY+P+ PNDYE++ K R++R+ + + + + K K G D D + + R + G AIAPP SL+E D S + P +E D + + + A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EK Q + + L + V+LLRNMVG GEVD+DL+ ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 96 LADEYDPMFPNDYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGEAQDASKKSDSNPLTEILKCP--TKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAE 403
BLAST of Splicing factor 45 vs. Ensembl Mouse
Match: Puf60 (poly-U binding splicing factor 60 [Source:MGI Symbol;Acc:MGI:1915209]) HSP 1 Score: 90.8929 bits (224), Expect = 5.891e-19 Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+FGGR V A YD E+F N +L Sbjct: 440 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 546
BLAST of Splicing factor 45 vs. Ensembl Mouse
Match: Puf60 (poly-U binding splicing factor 60 [Source:MGI Symbol;Acc:MGI:1915209]) HSP 1 Score: 90.5077 bits (223), Expect = 6.617e-19 Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+FGGR V A YD E+F N +L Sbjct: 457 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563
BLAST of Splicing factor 45 vs. Ensembl Mouse
Match: Htatsf1 (HIV TAT specific factor 1 [Source:MGI Symbol;Acc:MGI:1919709]) HSP 1 Score: 50.447 bits (119), Expect = 3.896e-6 Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 3 Query: 930 RVSNVILLRNMVGPGEVDDD------LQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYD 1190 R V++L+NM P + +DD ++ + ECSK+G++ ++F+ PD A V F + E A + +GR+FGGR ++A +D Sbjct: 262 RHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH--PDGVAS---VSFREPEEADHCIQTLDGRWFGGRQITAQAWD 349
BLAST of Splicing factor 45 vs. UniProt/SwissProt
Match: sp|Q96I25|SPF45_HUMAN (Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.748e-41 Identity = 127/308 (41.23%), Postives = 170/308 (55.19%), Query Frame = 3 Query: 366 DEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK----YDGVEETNDDDIASRVEKRTSDKSR-LVGTAIAPPPSLLE-------------DCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 DEY+P+ PNDYE++ K R++R+ + + + + K K G D D + + R + G AIAPP SL+E D S + P +E D + + + A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EKD ++ + I + V+LLRNMVG GEVD+DL+ ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 98 DEYDPMFPNDYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTE------ILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAE 399
BLAST of Splicing factor 45 vs. UniProt/SwissProt
Match: sp|Q8JZX4|SPF45_MOUSE (Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.538e-40 Identity = 127/310 (40.97%), Postives = 170/310 (54.84%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK----YDGVEETNDDDIASRVEKRTSDKSR-LVGTAIAPPPSLLE-------------DCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 + DEY+P+ PNDYE++ K R++R+ + + + + K K G D D + + R + G AIAPP SL+E D S + P +E D + + + A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EK Q + + L + V+LLRNMVG GEVD+DL+ ET EEC KYGKV C+IFE+ PDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 96 LADEYDPMFPNDYEKVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGEAQDASKKSDSNPLTEILKCP--TKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAE 403
BLAST of Splicing factor 45 vs. UniProt/SwissProt
Match: sp|P42698|DR111_ARATH (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT111 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 5.953e-29 Identity = 81/194 (41.75%), Postives = 116/194 (59.79%), Query Frame = 3 Query: 675 GNWDAVAIAATQ------AKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSL-ISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQD--VPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDP 1229 GN D +I ++ G +AA ++M KMG+K+G+GLGK QG++T L ++T RR G I++ + + ++S+ I+ + V+LLRNMVGPG+VDD+L+ E EC KYG V +IFE+ + P +AVRIFV+F E +A+VD +GRYFGGR V A +YD EKF EL P Sbjct: 192 GNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKV----VKSVNINGEPTRVLLLRNMVGPGQVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVP 381
BLAST of Splicing factor 45 vs. UniProt/SwissProt
Match: sp|Q9WV25|PUF60_RAT (Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.628e-18 Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+FGGR V A YD E+F N +L Sbjct: 457 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563
BLAST of Splicing factor 45 vs. UniProt/SwissProt
Match: sp|Q3UEB3|PUF60_MOUSE (Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.628e-18 Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMV P ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF ++A+ NGR+FGGR V A YD E+F N +L Sbjct: 457 MQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563
BLAST of Splicing factor 45 vs. TrEMBL
Match: A0A5K4ETW5 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 8.482e-74 Identity = 176/402 (43.78%), Postives = 243/402 (60.45%), Query Frame = 3 Query: 129 INLMQSHVNKLQRNSKK------QIQQPVTSKLPPVVDLKKTIG--EGEYRFNHLTGKMEKFNPVSNESQEFVD-IAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXAD-------SKYLKYDGVEETNDDDIASRVEKRTSDKSRLV-GTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLIS----------------DRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDPWT 1235 + LMQSH+ + ++ Q + L PVVDLK+ + +G YRFN LTG++E+ VS S + + F +P L LGV DEYNP++PN+YE++++I R++R+ +E D + D S + + DD+ + S+ G AIAPP LLED T+ SG++ + E+ N D ++ +K+G AAK+M +MG++EG+GLG+E QGMSTAL VE+TSRRGGKIIHEKD +QQ+ +A SL S + S VILLRNM GPGEVDDDL+ ETAEEC+KYGKVV CMI+EL + PDD+ VRIFVEF E+A +AV+D NGR+F GR+V AG+YD+EKF+NLEL + P + Sbjct: 66 LKLMQSHMAVKRAQGRRPATDSSNAQWSSRTTLAPVVDLKQRVPHVDGSYRFNQLTGRLERC--VSGSSGAMTNGLLFGEPNLPLGVMDEYNPMIPNEYEELARIKRERRRAEESALADRHHRLDPFGMNDPSGMCRRYEYSDEEDDEDNEYTAASGRNSSQPTKGAAIAPPSVLLEDVTVTSGSNAS-----QNSESSVNDDDPGVSTASSKFGINVVAAKMMARMGYREGQGLGRESQGMSTALVVEKTSRRGGKIIHEKDQQRQQIHANASATTNNSLPSYLSANVEETFNNLPLPENRSCVILLRNMCGPGEVDDDLEPETAEECAKYGKVVMCMIYELPEAPDDEVVRIFVEFESEEAATKAVLDLNGRFFAGRVVKAGFYDAEKFRNLELADAPLS 460
BLAST of Splicing factor 45 vs. TrEMBL
Match: A0A1S8X6M0 (G-patch domain protein OS=Opisthorchis viverrini OX=6198 GN=X801_01736 PE=4 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 1.486e-73 Identity = 175/391 (44.76%), Postives = 238/391 (60.87%), Query Frame = 3 Query: 126 SINLMQSHVNKLQRNSKKQIQQPVTSKLPPVVDLK-KTIGEGEYRFNHLTGKMEKFNPV----SNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK-----------YDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXX------XXXXXKIQSL-ISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDP 1229 S+ MQSH+ +R ++ + PVVDLK + EG +RFNH TG++E+ S+ + + F +P L LGV DEYNPL+PND+E++ +I R++R+ +E + D L D +E ++ AS + G AIAPP SLLE T+ G+ E P+ E +E++ + AT K+G + AAK+M +MG++EG+GLG+E QGM+TAL VE+TSRRGGKIIHE+D +QQ I +L + + S VILLRNM GPGEVDDDLQ ETAEEC+KYGKVV+CMIFEL D PDD+AVRIFVEF + A +AV+D NGR+F GR+V AG+YD+EKF+NLEL + P Sbjct: 62 SMKFMQSHM-AAKRAQGRRDNFSARPSIAPVVDLKQRNNAEGSFRFNHQTGRLERVGSRGVLGSSPAMMTGGLLFGEPALPLGVTDEYNPLVPNDFEELVRIKRERRRAEEAAIAAAAHRHDGSDLSGMCKRPDFSDYEDDDDEFDEPTAASGGRRSRQAAPPPKGAAIAPPSSLLEGTTVDPGSTSEGPM--ETEESE------TVGAT-TKFGINAVAAKMMARMGYREGQGLGRESQGMATALVVEKTSRRGGKIIHERDQQRQQATQQNPLPDSTVEETINNLPLPENRSCVILLRNMCGPGEVDDDLQPETAEECAKYGKVVSCMIFELADTPDDEAVRIFVEFESEDGATKAVLDLNGRFFAGRVVKAGFYDAEKFRNLELADAP 442
BLAST of Splicing factor 45 vs. TrEMBL
Match: A0A074ZT79 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_02973 PE=4 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 2.204e-73 Identity = 175/391 (44.76%), Postives = 238/391 (60.87%), Query Frame = 3 Query: 126 SINLMQSHVNKLQRNSKKQIQQPVTSKLPPVVDLK-KTIGEGEYRFNHLTGKMEKFNPV----SNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK-----------YDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXX------XXXXXKIQSL-ISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDP 1229 S+ MQSH+ +R ++ + PVVDLK + EG +RFNH TG++E+ S+ + + F +P L LGV DEYNPL+PND+E++ +I R++R+ +E + D L D +E ++ AS + G AIAPP SLLE T+ G+ E P+ E +E++ + AT K+G + AAK+M +MG++EG+GLG+E QGM+TAL VE+TSRRGGKIIHE+D +QQ I +L + + S VILLRNM GPGEVDDDLQ ETAEEC+KYGKVV+CMIFEL D PDD+AVRIFVEF + A +AV+D NGR+F GR+V AG+YD+EKF+NLEL + P Sbjct: 62 SMKFMQSHM-AAKRAQGRRDNFSARPSIAPVVDLKQRNNAEGSFRFNHQTGRLERVGSRGVLGSSPAMMTGGLLFGEPALPLGVTDEYNPLVPNDFEELVRIKRERRRAEEAAIAAAAHRHDGSDLSGMCKRPDFSDYEDDDDEFDEPTAASGGRRGRQAAPPPKGAAIAPPSSLLEGTTVDPGSTSEGPM--ETEESE------TVGAT-TKFGINAVAAKMMARMGYREGQGLGRESQGMATALVVEKTSRRGGKIIHERDQQRQQATQQNPLPDSTVEETINNLPLPENRSCVILLRNMCGPGEVDDDLQPETAEECAKYGKVVSCMIFELADTPDDEAVRIFVEFESEDGATKAVLDLNGRFFAGRVVKAGFYDAEKFRNLELADAP 442
BLAST of Splicing factor 45 vs. TrEMBL
Match: A0A4Z2DBI9 (Splicing factor 45 OS=Schistosoma japonicum OX=6182 GN=EWB00_002582 PE=4 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.630e-72 Identity = 177/409 (43.28%), Postives = 246/409 (60.15%), Query Frame = 3 Query: 129 INLMQSHVNKLQRNSKKQIQQPVT----------SKLPPVVDLKKTIG--EGEYRFNHLTGKMEKFNPVSNESQEFVD-IAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXAD----------SKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXX----XXXXXKIQSLISDRV-------------SNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDPWT 1235 + LMQSH+ + Q ++PVT + L PVVDLK+ + +G YRFN LTG++E+ VS S + + F +P L LGV DEYNP++PN+YE++++I R++R+ +E D + D + +Y +E D + + + S S+ G AIAPP LLED T+ G++ + +E N D ++ +K+G AAK+M +MG++EG+GLG+E QGMSTAL VE+TSRRGGKIIHEKD +QQ + S ++ V S VILLRNM GPGEVDDDL+ ETAEEC+KYGKVV CMI+EL + PDD+ VRIFVEF E+A +AV+D NGR+F GR+V AG+YD+EKF+NLEL + P + Sbjct: 67 LKLMQSHMAV----KRAQGRRPVTDSSNSQWSSRTTLAPVVDLKQRVSHVDGSYRFNQLTGRLERC--VSGSSGAMTNGLLFGEPNLPLGVMDEYNPMIPNEYEELARIKRERRRAEESALADRHHRLDPFGMNDPSGMCRRYEYSDEDEDEDTEYTAASGRNYSQPSK--GAAIAPPSVLLEDVTVTPGSNAS-----QNNEASTNDDDPGVSTASSKFGINVVAAKMMARMGYREGQGLGRESQGMSTALMVEKTSRRGGKIIHEKDQQRQQTQANTTSTNNNNNLPSYLNANVEETFNNLPLPENRSCVILLRNMCGPGEVDDDLEPETAEECAKYGKVVMCMIYELPEAPDDEVVRIFVEFDSEEAATKAVLDLNGRFFAGRVVKAGFYDAEKFRNLELADAPLS 462
BLAST of Splicing factor 45 vs. TrEMBL
Match: A0A3Q0KRQ7 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 6.418e-72 Identity = 176/412 (42.72%), Postives = 244/412 (59.22%), Query Frame = 3 Query: 129 INLMQSHVNKLQRNSKK------QIQQPVTSKLPPVVDLKKTIG--EGEYRFNHLTGKMEKF-----NPVSNESQEFVDIA------FDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXAD-------SKYLKYDGVEETNDDDIASRVEKRTSDKSRLV-GTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLIS----------------DRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDPWT 1235 + LMQSH+ + ++ Q + L PVVDLK+ + +G YRFN LTG++E+ S S ++ + A F +P L LGV DEYNP++PN+YE++++I R++R+ +E D + D S + + DD+ + S+ G AIAPP LLED T+ SG++ + E+ N D ++ +K+G AAK+M +MG++EG+GLG+E QGMSTAL VE+TSRRGGKIIHEKD +QQ+ +A SL S + S VILLRNM GPGEVDDDL+ ETAEEC+KYGKVV CMI+EL + PDD+ VRIFVEF E+A +AV+D NGR+F GR+V AG+YD+EKF+NLEL + P + Sbjct: 66 LKLMQSHMAVKRAQGRRPATDSSNAQWSSRTTLAPVVDLKQRVPHVDGSYRFNQLTGRLERCVSGSSGGKSKRSLKYSNTAMTNGLLFGEPNLPLGVMDEYNPMIPNEYEELARIKRERRRAEESALADRHHRLDPFGMNDPSGMCRRYEYSDEEDDEDNEYTAASGRNSSQPTKGAAIAPPSVLLEDVTVTSGSNAS-----QNSESSVNDDDPGVSTASSKFGINVVAAKMMARMGYREGQGLGRESQGMSTALVVEKTSRRGGKIIHEKDQQRQQIHANASATTNNSLPSYLSANVEETFNNLPLPENRSCVILLRNMCGPGEVDDDLEPETAEECAKYGKVVMCMIYELPEAPDDEVVRIFVEFESEEAATKAVLDLNGRFFAGRVVKAGFYDAEKFRNLELADAPLS 472
BLAST of Splicing factor 45 vs. Ensembl Cavefish
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:103040370]) HSP 1 Score: 159.073 bits (401), Expect = 9.803e-44 Identity = 142/397 (35.77%), Postives = 214/397 (53.90%), Query Frame = 3 Query: 72 FDDVGKSKNVSWSGGLTPSINLMQSH--VNKLQRNSKKQIQQPVTSKLPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRVEKRTSD--------KSRLVG---TAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 +DD+G + + + + G + + L+QS V K K + ++ L PVVDLK+ E + + P + V F + + + DEY+P+ PNDYE++ K R++R+ +++ + + KY +++G + + + + +S LV + + P S D + IP D ++ A G T A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII D ++ + + + ++ + V+LLRNMVG GEVD+DL++ET EEC KYGKVV C+IFE+ DV DD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 4 YDDLGVATSDAKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMRQSTVLAPVVDLKRGSDERQ---------IPDTPPHVAAGLKDVPGGFSAGDVLIPLPDEYDPMFPNDYEKVVKRHREERQRQREQERQKEIEEREKYERHEGSAPSGFSRFPTEADSDEDEEYEKEKRKRSGLVMFGVSCVLTPASYSYDEEGRQRSKAAIPPPVYDDSERPRSPPGPTSSFLANMGGT-VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIII-GDSTEKNPSKKNEVNPLTEILKC-PTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVKCVIFEISDVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGE 388
BLAST of Splicing factor 45 vs. Ensembl Cavefish
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:103040370]) HSP 1 Score: 152.91 bits (385), Expect = 3.499e-41 Identity = 134/326 (41.10%), Postives = 179/326 (54.91%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQI-------------SXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMS----GNDIEIPVLPECDENDGNWDAVAIAATQ---AKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXX------------XXXXXKIQSL--ISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 + DEY+P+ PNDYE++ + ++ + ++K+KE A S + ++ T D ++ K + G AIAPP SL+E T S G +P +D T A G T A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EK+ Q A ++ L I + V+LLRNMVG GEVD+DL++ET EEC KYGKVV C+IFE+ DV DD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 93 LPDEYDPMFPNDYEKVVKRHREERQRQREQERQKEIEEREKKRKERHEGSAPSGFSRF----PTEADSDEDEEYEKEKRKRSMGGAAIAPPTSLVERDTSYSYDEEGRQRSKAAIPPPVYDDSERPRSPPGPTSSFLANMGGT-VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKNSGSSQSAADTPGSNSGASADPSKKNEVNPLTEILKCPTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVKCVIFEISDVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGE 413
BLAST of Splicing factor 45 vs. Ensembl Cavefish
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:103040370]) HSP 1 Score: 109.768 bits (273), Expect = 1.301e-25 Identity = 114/295 (38.64%), Postives = 153/295 (51.86%), Query Frame = 3 Query: 360 VKDEYNPLMPNDYEQI-------------SXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMS----GNDIEIPVLPECDENDGNWDAVAIAATQ---AKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXX------------XXXXXKIQSL--ISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRA 1130 + DEY+P+ PNDYE++ + ++ + ++K+KE A S + ++ T D ++ K + G AIAPP SL+E T S G +P +D T A G T A KIM K GF+EG+GLGK QG+STAL VE+TS+RGGKII EK+ Q A ++ L I + V+LLRNMVG GEVD+DL++ET EEC KYGKVV C+IFE+ DV DD+AVRIF+EF VESA + Sbjct: 93 LPDEYDPMFPNDYEKVVKRHREERQRQREQERQKEIEEREKKRKERHEGSAPSGFSRFP----TEADSDEDEEYEKEKRKRSMGGAAIAPPTSLVERDTSYSYDEEGRQRSKAAIPPPVYDDSERPRSPPGPTSSFLANMGGT-VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKNSGSSQSAADTPGSNSGASADPSKKNEVNPLTEILKCPTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVKCVIFEISDVTDDEAVRIFLEFERVESAIKG 382
BLAST of Splicing factor 45 vs. Ensembl Cavefish
Match: puf60a (poly(U)-binding-splicing factor PUF60 [Source:NCBI gene;Acc:103042138]) HSP 1 Score: 88.5817 bits (218), Expect = 2.120e-18 Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +Q L+ + S V++LRNMVGP ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ N R+FGGR V A YD E+F N +L Sbjct: 408 MQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDLS 514
BLAST of Splicing factor 45 vs. Ensembl Cavefish
Match: puf60a (poly(U)-binding-splicing factor PUF60 [Source:NCBI gene;Acc:103042138]) HSP 1 Score: 88.5817 bits (218), Expect = 2.133e-18 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +Q L+ + S V++LRNMVGP ++DDDL+ E EEC K+G V +I++ + ++ A V+IFVEF +A+ N R+FGGR V A YD E+F N +L Sbjct: 434 MQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDL 539
BLAST of Splicing factor 45 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001053.1 (pep scaffold:Pmarinus_7.0:GL478206:26457:39057:1 gene:ENSPMAG00000000940.1 transcript:ENSPMAT00000001053.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 163.696 bits (413), Expect = 5.452e-46 Identity = 138/409 (33.74%), Postives = 207/409 (50.61%), Query Frame = 3 Query: 72 FDDVGKSKNVSWSGGLTPSINLMQSH--VNKLQRNSKKQIQQPVTSKLPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK----YDGVEET--NDDDIASRVEKRTSDKSRLVGTAIAPPPSLLE---DCTIMSGNDIEI--------PVLPECDENDGNWDAVAIAATQAKYGTT---SAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQ----SLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 +DD+ ++ S + G + + L+QS V K K + ++ L PVVDLK+ G E R + V+ + +AF +L + V DEY+P+ PNDY+++ K R+ R+ + + + K K G+ +DD+ EKR K +G AIAPP SL+E D + D EI +P + D + + + + I++ + AL VE+TS+RGGK + ++ ++ L +A K + + I + V+LLRNMVGPGEVD+DL+SET EEC KYGKV+ C+IFE+ P+D AVRIF+EF +ESA +AVVD NGRYFGGRIV AG+Y+ +KF+ L+L Sbjct: 4 YDDLRVERSDSKTEGWSKNFKLLQSQLQVKKAALTQAKNQRGKQSTVLAPVVDLKRNSGP-EERTSFPEPPPPPP--VATTPKVVPPMAFMGEML-IPVADEYDPMYPNDYDKVVKRQREDRQRQREHERQKEIDDREKRRKERHEASGMSRRPESDDEEEYEAEKR---KRGTMGAAIAPPSSLMERDKDYSYTVAPDDEIKRGRMSGKAAIPPPNYEDSGERPRSPPGGSSSFISNMGFLILFLILLYLILHLQVLFSHSLLPDPLALSVEKTSKRGGKTLIGDNVPKEGLHANTSAKKQEPNPLTEILKNPTKVVLLRNMVGPGEVDEDLESETKEECEKYGKVIKCVIFEMPGAPEDDAVRIFLEFERMESAIKAVVDLNGRYFGGRIVKAGFYNLDKFRRLDLA 405
BLAST of Splicing factor 45 vs. Ensembl Sea Lamprey
Match: u2af2a (U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]) HSP 1 Score: 51.9878 bits (123), Expect = 2.048e-7 Identity = 38/105 (36.19%), Postives = 50/105 (47.62%), Query Frame = 3 Query: 936 SNVILLRNMVGPGEVDDDLQSE-----TAEECSKYGKVVTCMI---FELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCED 1226 + V+ L NMV P E+ DD + E EEC KYG V + I D+P +IFVEF + RA +GR F R+V YY+ EK+ C D Sbjct: 361 TEVLCLMNMVTPEELVDDEEYEDILEDIREECGKYGSVRSVEIPRPVNGLDIPG--CGKIFVEFASLLDCQRAQQALSGRKFANRVVVTQYYNLEKYH----CHD 459
BLAST of Splicing factor 45 vs. Ensembl Nematostella
Match: EDO39985 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8H1]) HSP 1 Score: 166.777 bits (421), Expect = 5.581e-47 Identity = 111/228 (48.68%), Postives = 148/228 (64.91%), Query Frame = 3 Query: 564 RLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAA-----TQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIH-EKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQ-DVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCED 1226 R VG AIAPP SLLE P++P+ E D + D + T + + A+ IM K G+K+G+GLGK QG++T LQVE+TS+RGGKII+ EK+ + Q +++ S V+LLRNMVGPGEVDDDLQ ETAEEC+KYG+VV +I+E+ PDD+AVRIFVEF +ESA +AVVD NGRYFGGR V A +++ +KF+ L+L +D Sbjct: 184 RSVGAAIAPPSSLLESE----------PIVPQ-KEPDPSIDGRPLVTGDKEKTDLGFAVNAVASSIMAKYGWKDGQGLGKSEQGINTCLQVEKTSKRGGKIINQEKEAAKSQAEGDSLVGAMKN-----PSKVVLLRNMVGPGEVDDDLQPETAEECAKYGEVVKVIIYEIPVGAPDDEAVRIFVEFTRMESAIKAVVDLNGRYFGGRTVKANFFNLDKFRRLDLADD 395
BLAST of Splicing factor 45 vs. Ensembl Nematostella
Match: EDO25346 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DWR4]) HSP 1 Score: 150.599 bits (379), Expect = 1.166e-43 Identity = 80/144 (55.56%), Postives = 104/144 (72.22%), Query Frame = 3 Query: 804 STALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLIS--DRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQ-DVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCED 1226 +T LQVE+TS+RGGKII+++ + A SL+ S V+LLRNMVGPGEVDDDLQ ETAEEC+KYG+VV +I+E+ PDD+AVRIFVEF +ESA +AVVD NGRYFGGR V A +++ +KF+ L+L +D Sbjct: 20 NTCLQVEKTSKRGGKIINQEKEAAKLQAEG------DSLVGAMKNPSKVVLLRNMVGPGEVDDDLQPETAEECAKYGEVVKVIIYEIPVGAPDDEAVRIFVEFTRMESAIKAVVDLNGRYFGGRTVKANFFNLDKFRRLDLADD 157
BLAST of Splicing factor 45 vs. Ensembl Nematostella
Match: EDO46306 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQK4]) HSP 1 Score: 80.8777 bits (198), Expect = 2.081e-16 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 816 QVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELC 1220 + +R GG I HE+++ + +Q L S V++LRNMVG ++D+DL+ E +ECSK+G V +I++ + ++ A V+IFVEF + +A + +GR+FGGR V A Y+ +KF + +L Sbjct: 368 ETQRKMAEGGSISHEENMSISGSNARYMV--MQKLSRKSESKVMVLRNMVGVEDLDEDLEHEVTDECSKFGTVSRVVIYKEKQGEEEDAEVIVKIFVEFTSPDETDKATSNLDGRWFGGRAVKAEAYNEDKFLSADLS 503
BLAST of Splicing factor 45 vs. Ensembl Nematostella
Match: EDO48329 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJT7]) HSP 1 Score: 50.447 bits (119), Expect = 7.364e-7 Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 3 Query: 936 SNVILLRNMVGPGEVDDDLQSE-----TAEECSKYGKVVTCMIFE-LQDVPDDQAV-RIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFK 1205 + V+ L NMV P E+ DD + E EECSKYG+V + I ++ + + V +IFVEF ++ A +A GR F R+V YY E++ Sbjct: 231 TEVLALMNMVTPDELGDDEEFEEIYDDVREECSKYGRVKSMEIPRPMEGLMEPPGVGKIFVEFSSIDDAKKAAAALGGRKFANRVVVTSYYPPEEYH 327
BLAST of Splicing factor 45 vs. Ensembl Medaka
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:101158922]) HSP 1 Score: 169.088 bits (427), Expect = 4.233e-47 Identity = 153/425 (36.00%), Postives = 222/425 (52.24%), Query Frame = 3 Query: 72 FDDVGKSKNVSWSGGLTPSINLMQSHVN----KLQRNSKKQIQQPVTSKLPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLK--YDGVEETNDDDIAS--------RVEKRTSDKSRLVGTAIAPPPSLLE-----------DCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKII----HEKDXXXXXXXXXXXXXKIQSLISDRV------------SNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 +DD+G + + + G + + L+QS + L + ++++Q T+ L PV+DLK R + + P + V AF + + + DEY+P+ PNDYE++ K R++R+ +++ + + K K +DG + + +R K + G AIAPP SL++ + G + IP D + ++ A G T A KIM K GFKEG+GLGK QG+STAL VE+TS+RGGKII EK Q A + + S + + V+LLRNMVG GEVD+DL+ ET EEC KYGKVV C+IFE+ +VPDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 4 YDDLGVGASDTKTEGWSKNFKLLQSQLKVKKAALTQAKTQRVKQ--TTVLAPVIDLK--------RGGSIDERQSTDTPPHAGLMDAVPSAFSAGDVLIPLADEYDPMFPNDYEKVMKRHREERQRQREQERQKEIEEREKRRKDRHDGGAPSGFSRFPAAEEDSDEDEEYERERRKRSMGGAAIAPPSSLVDRDGSSSFSYEDEGRPSRGPKVAIPPPMYEDSDRPRSPPGPTSSFLANMGGT-VAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDAAEKPGSSQAGAAEIPGGGAAADASKKSESNPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVIFEIAEVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGE 417
BLAST of Splicing factor 45 vs. Ensembl Medaka
Match: rbm17 (RNA binding motif protein 17 [Source:NCBI gene;Acc:101158922]) HSP 1 Score: 155.221 bits (391), Expect = 3.125e-42 Identity = 78/140 (55.71%), Postives = 104/140 (74.29%), Query Frame = 3 Query: 804 STALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCE 1223 STAL VE+TS+RGGKII + + + + + ++ + + V+LLRNMVG GEVD+DL+ ET EEC KYGKVV C+IFE+ +VPDD+AVRIF+EF VESA +AVVD NGRYFGGR+V A +Y+ +KF+ L+L E Sbjct: 254 STALSVEKTSKRGGKIIIGDAAEKPDASKKSESNPLTEILKN-PTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVIFEIAEVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGE 392
BLAST of Splicing factor 45 vs. Ensembl Medaka
Match: ENSORLT00000038235.1 (poly(U)-binding-splicing factor PUF60-like [Source:NCBI gene;Acc:101171279]) HSP 1 Score: 95.9005 bits (237), Expect = 8.940e-21 Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 ++ L+ R S V++LRNMVGP ++DDDL+ E EEC KYG+V +I++ + +D A V+IFVEF + RA+ N R+FGGR V A YD E+F+N +L Sbjct: 408 MRKLLRKRESTVMVLRNMVGPEDIDDDLEGEVTEECGKYGQVKRVIIYQERQGEEDDADIIVKIFVEFCEAMEMNRAIQALNNRWFGGRKVVAEVYDQERFENSDL 513
BLAST of Splicing factor 45 vs. Ensembl Medaka
Match: ENSORLT00000045704.1 (poly(U)-binding-splicing factor PUF60-like [Source:NCBI gene;Acc:101171279]) HSP 1 Score: 95.5153 bits (236), Expect = 1.041e-20 Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 ++ L+ R S V++LRNMVGP ++DDDL+ E EEC KYG+V +I++ + +D A V+IFVEF + RA+ N R+FGGR V A YD E+F+N +L Sbjct: 412 MRKLLRKRESTVMVLRNMVGPEDIDDDLEGEVTEECGKYGQVKRVIIYQERQGEEDDADIIVKIFVEFCEAMEMNRAIQALNNRWFGGRKVVAEVYDQERFENSDL 517
BLAST of Splicing factor 45 vs. Ensembl Medaka
Match: ENSORLT00000038253.1 (poly(U)-binding-splicing factor PUF60-like [Source:NCBI gene;Acc:101171279]) HSP 1 Score: 92.4337 bits (228), Expect = 9.415e-20 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 930 RVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLEL 1217 +S V++LRNMVGP ++DDDL+ E EEC KYG+V +I++ + +D A V+IFVEF + RA+ N R+FGGR V A YD E+F+N +L Sbjct: 380 HMSTVMVLRNMVGPEDIDDDLEGEVTEECGKYGQVKRVIIYQERQGEEDDADIIVKIFVEFCEAMEMNRAIQALNNRWFGGRKVVAEVYDQERFENSDL 478
BLAST of Splicing factor 45 vs. Planmine SMEST
Match: SMESG000038359.1 (SMESG000038359.1) HSP 1 Score: 692.189 bits (1785), Expect = 0.000e+0 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 3 Query: 66 YDFDDVGKSKNVSWSGGLTPSINLMQSHVNKLQRNSKKQIQQPVTSKLPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISXXXXXXXXXXXXXXXXXXXXADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVXXXXXXXXXXXXXXXXXSTALQVERTSRRGGKIIHEKDXXXXXXXXXXXXXKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDPWTFHE 1244 YDFDDVGKSKNVSWSGGLTPSINLMQSHVNKLQRNSKKQIQQPVTSKLPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISKILRDKRKLDEKKKEDEIRKADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVKMGFKEGKGLGKEGQGMSTALQVERTSRRGGKIIHEKDLLQQQLAVQQAALKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDPWTFHE Sbjct: 4 YDFDDVGKSKNVSWSGGLTPSINLMQSHVNKLQRNSKKQIQQPVTSKLPPVVDLKKTIGEGEYRFNHLTGKMEKFNPVSNESQEFVDIAFDDPILRLGVKDEYNPLMPNDYEQISKILRDKRKLDEKKKEDEIRKADSKYLKYDGVEETNDDDIASRVEKRTSDKSRLVGTAIAPPPSLLEDCTIMSGNDIEIPVLPECDENDGNWDAVAIAATQAKYGTTSAAAKIMVKMGFKEGKGLGKEGQGMSTALQVERTSRRGGKIIHEKDLLQQQLAVQQAALKIQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTCMIFELQDVPDDQAVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKNLELCEDPWTFHE 396
BLAST of Splicing factor 45 vs. Planmine SMEST
Match: SMESG000046155.1 (SMESG000046155.1) HSP 1 Score: 73.559 bits (179), Expect = 9.276e-14 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTC-MIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKF 1202 +Q L+ V V++LRNM+ ++DD ++ E EEC+K+G+V ++ E +D +D A V+IFV F +S A+ NGR+FGGRIV A YD E F Sbjct: 384 MQKLLRPTVHKVMVLRNMIDQNDIDDQIEEEVYEECAKFGEVQEVKIVVESRD--NDNANGEVKIFVVFKSTDSINIAINSMNGRFFGGRIVIADKYDQELF 483
BLAST of Splicing factor 45 vs. Planmine SMEST
Match: SMESG000046155.1 (SMESG000046155.1) HSP 1 Score: 73.559 bits (179), Expect = 9.382e-14 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 909 IQSLISDRVSNVILLRNMVGPGEVDDDLQSETAEECSKYGKVVTC-MIFELQDVPDDQA---VRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKF 1202 +Q L+ V V++LRNM+ ++DD ++ E EEC+K+G+V ++ E +D +D A V+IFV F +S A+ NGR+FGGRIV A YD E F Sbjct: 392 MQKLLRPTVHKVMVLRNMIDQNDIDDQIEEEVYEECAKFGEVQEVKIVVESRD--NDNANGEVKIFVVFKSTDSINIAINSMNGRFFGGRIVIADKYDQELF 491
BLAST of Splicing factor 45 vs. Planmine SMEST
Match: SMESG000078029.1 (SMESG000078029.1) HSP 1 Score: 58.151 bits (139), Expect = 8.086e-9 Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 3 Query: 936 SNVILLRNMVGPGEVDDDLQSE-----TAEECSKYGKVVTCMIFELQDVPDDQ---AVRIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKN 1208 + ++ L NM+ P E+ DD + E EECSKYG V + I +D +I+VEF + +A+ GR F GR+V +YD E+++N Sbjct: 399 TEILCLHNMITPEELTDDEEYEEIVEDVKEECSKYGSVNSLQIPRPTGSEEDSRNGVGKIYVEFSNKSETVKAMKALAGRTFSGRVVVTSFYDPERYRN 497
BLAST of Splicing factor 45 vs. Planmine SMEST
Match: SMESG000018652.1 (SMESG000018652.1) HSP 1 Score: 54.299 bits (129), Expect = 1.355e-7 Identity = 32/98 (32.65%), Postives = 53/98 (54.08%), Query Frame = 3 Query: 936 SNVILLRNMVGPGEVDDD-----LQSETAEECSKYGKVVTCMIFELQDVPDDQAV--RIFVEFVDVESAYRAVVDTNGRYFGGRIVSAGYYDSEKFKN 1208 + V+ L NMV ++ DD + + EECSK+G V++ I D+ + +IFVEF + +A+ +GR F G++V +YD EK++N Sbjct: 376 TEVLCLHNMVMIDDLRDDEEYEEIMEDVKEECSKFGTVLSVQIPRPTGADDNVSGVGKIFVEFYNKSETVKAMKALSGRTFSGKVVVTSFYDLEKYRN 473 The following BLAST results are available for this feature:
BLAST of Splicing factor 45 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Splicing factor 45 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Splicing factor 45 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Splicing factor 45 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Splicing factor 45 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 4
BLAST of Splicing factor 45 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of Splicing factor 45 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Splicing factor 45 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Splicing factor 45 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Splicing factor 45 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Splicing factor 45 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Splicing factor 45 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Splicing factor 45 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Splicing factor 45 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012275 ID=SMED30012275|Name=Splicing factor 45|organism=Schmidtea mediterranea sexual|type=transcript|length=1435bpback to top protein sequence of SMED30012275-orf-1 >SMED30012275-orf-1 ID=SMED30012275-orf-1|Name=SMED30012275-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=397bp MSLYDFDDVGKSKNVSWSGGLTPSINLMQSHVNKLQRNSKKQIQQPVTSKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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