UPF0764 protein C16orf89 homolog isoform X3

Overview
NameUPF0764 protein C16orf89 homolog isoform X3
Smed IDSMED30012198
Length (bp)1296
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of UPF0764 protein C16orf89 homolog isoform X3 (SMED30012198) t-SNE clustered cells

Violin plots show distribution of expression levels for UPF0764 protein C16orf89 homolog isoform X3 (SMED30012198) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of UPF0764 protein C16orf89 homolog isoform X3 (SMED30012198) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for UPF0764 protein C16orf89 homolog isoform X3 (SMED30012198) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30012198

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30012198SMESG000053422.1 dd_Smed_v4_4213_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30012198SMESG000053422.1 dd_Smed_v4_4213_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30012198SMESG000053422.1 dd_Smed_v4_4213_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30012198SMESG000053422.1 dd_Smed_v4_4213_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30012198SMESG000053422.1 dd_Smed_v4_4213_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Zebrafish
Match: C3H16orf89 (si:ch211-76l23.7 [Source:NCBI gene;Acc:566173])

HSP 1 Score: 55.0694 bits (131), Expect = 6.443e-8
Identity = 83/364 (22.80%), Postives = 156/364 (42.86%), Query Frame = 2 
Query:  134 MKINFVSILLLILSC--NASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPR---HSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNS-FKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCM-------KEITDNCSISNSCYNLFV--GSPIGEEYIATHQAIYLELYIENKC--FLKHE---SHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICG----GQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIA-GCSSHTLGLGAASNGAFLQKFL 1150
            +K+ +   +LL+LS   + S++++ D  L SL   SK + +       I++DG+ G+ +L+  L    R   HS      + +  I   + K+   LSK +  A   + +    Y+ +    ++S F ++   W     +    +      ++   Y+E   D CM       K+    C ++ +C +     G P    Y  +HQ +Y  +     C   LK +   S +N++    K    C N++ +N+ I   +  +     D+F+E +++CG      F  LD+L     + +       GCF  +   + I +  +    +  H   +RR KT+  GCSSH  G+  ++ G FL  +L
Sbjct:    4 LKMLYPLFMLLVLSSKIDLSNQDVIDNILMSL---SKGITYFDMQGSNINLDGVVGYIILQAQLREATRTWPHSDFLSLSQRAAAI--SMLKR---LSKSLSTAASTLQETDPKYFKEFEPILDSSFWSLPGEW-----SSTDPSLVYTSVRAMECYDEHMSDKCMTFLLGTWKDNGTPCIVTKTCRDTMTQFGCP---HYSLSHQLLYFMIGTMKGCSKMLKGDLRLSRVNITVGHYK-RIFCSNMMKSNQDIF--KNSLTGQMQDIFIENILLCGLVGFSDFYKLDWLQ----SILTWQDQEAGCFGKEEDISHIFEEFL----DAPHKRVKRREKTLTDGCSSHMTGVAVSALGGFLNFYL 340
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Mouse
Match: AU021092 (expressed sequence AU021092 [Source:MGI Symbol;Acc:MGI:2146559])

HSP 1 Score: 62.3882 bits (150), Expect = 3.727e-10
Identity = 83/324 (25.62%), Postives = 134/324 (41.36%), Query Frame = 2 
Query:  221 LEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMN-LSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPA-KSAAFYNEEKGDSCMKEI----TDN---CSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKC----FLKHESHINVSDLKMKLEDVCVNLLATN-RKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPN-GCFEVKNFKNTISKRAMRSISNKLHVVE--RRRSKTIA-GCSSHTLGLGAASNGAFL 1138
            L A+ K+  FL      I++DG+ GFQ+LE  L  +      K  HK   +  S    Q  N LS +++ +I  + +    Y  +   ++         WKL +   R     V P  +    ++EE  D C+ ++    TD+   C +SN C  L   +     Y  +HQ ++        C    FL+ + ++++          C N++  N R   VG       T DLF+E ++ C G   + DF        +   QNP  GCF   + K   S+     + ++  ++   RRR K  A GCS H      A+ G FL
Sbjct:   36 LTALEKATLFLEDRLPTINLDGVVGFQVLEVQLRGVQE----KWAHKPLLQPLSMRAGQMANTLSALLQKSIFYLKQSDPTYLREFQPSIQP-----GFWKLPNDWTRTNASLVYPWLEPLDSFSEESSDVCLVQLLGTGTDSSQPCRLSNFCRTLMTKAGC-SGYSLSHQLLFFLWARMQGCTEGLFLQSQHYMDI---------FCANMMELNHRAEAVG---YAYPTQDLFMENIMFC-GMAGFSDFYKLRWLEAILSWQNPQVGCFGRPDTKGEPSE-----VPHQQGILRRVRRREKLFADGCSCHNTATAVAALGGFL 331
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. UniProt/SwissProt
Match: sp|Q3UST5|CP089_MOUSE (UPF0764 protein C16orf89 homolog OS=Mus musculus OX=10090 PE=2 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 2.607e-9
Identity = 83/324 (25.62%), Postives = 134/324 (41.36%), Query Frame = 2 
Query:  221 LEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMN-LSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPA-KSAAFYNEEKGDSCMKEI----TDN---CSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKC----FLKHESHINVSDLKMKLEDVCVNLLATN-RKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPN-GCFEVKNFKNTISKRAMRSISNKLHVVE--RRRSKTIA-GCSSHTLGLGAASNGAFL 1138
            L A+ K+  FL      I++DG+ GFQ+LE  L  +      K  HK   +  S    Q  N LS +++ +I  + +    Y  +   ++         WKL +   R     V P  +    ++EE  D C+ ++    TD+   C +SN C  L   +     Y  +HQ ++        C    FL+ + ++++          C N++  N R   VG       T DLF+E ++ C G   + DF        +   QNP  GCF   + K   S+     + ++  ++   RRR K  A GCS H      A+ G FL
Sbjct:   36 LTALEKATLFLEDRLPTINLDGVVGFQVLEVQLRGVQE----KWAHKPLLQPLSMRAGQMANTLSALLQKSIFYLKQSDPTYLREFQPSIQP-----GFWKLPNDWTRTNASLVYPWLEPLDSFSEESSDVCLVQLLGTGTDSSQPCRLSNFCRTLMTKAGC-SGYSLSHQLLFFLWARMQGCTEGLFLQSQHYMDI---------FCANMMELNHRAEAVG---YAYPTQDLFMENIMFC-GMAGFSDFYKLRWLEAILSWQNPQVGCFGRPDTKGEPSE-----VPHQQGILRRVRRREKLFADGCSCHNTATAVAALGGFL 331
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. UniProt/SwissProt
Match: sp|A7MCS3|CP089_DANRE (UPF0764 protein C16orf89 homolog OS=Danio rerio OX=7955 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 4.864e-7
Identity = 83/364 (22.80%), Postives = 156/364 (42.86%), Query Frame = 2 
Query:  134 MKINFVSILLLILSC--NASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPR---HSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNS-FKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCM-------KEITDNCSISNSCYNLFV--GSPIGEEYIATHQAIYLELYIENKC--FLKHE---SHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICG----GQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIA-GCSSHTLGLGAASNGAFLQKFL 1150
            +K+ +   +LL+LS   + S++++ D  L SL   SK + +       I++DG+ G+ +L+  L    R   HS      + +  I   + K+   LSK +  A   + +    Y+ +    ++S F ++   W     +    +      ++   Y+E   D CM       K+    C ++ +C +     G P    Y  +HQ +Y  +     C   LK +   S +N++    K    C N++ +N+ I   +  +     D+F+E +++CG      F  LD+L     + +       GCF  +   + I +  +    +  H   +RR KT+  GCSSH  G+  ++ G FL  +L
Sbjct:    4 LKMLYPLFMLLVLSSKIDLSNQDVIDNILMSL---SKGITYFDMQGSNINLDGVVGYIILQAQLREATRTWPHSDFLSLSQRAAAI--SMLKR---LSKSLSTAASTLQETDPKYFKEFEPILDSSFWSLPGEW-----SSTDPSLVYTSVRAMECYDEHMSDKCMTFLLGTWKDNGTPCIVTKTCRDTMTQFGCP---HYSLSHQLLYFMIGTMKGCSKMLKGDLRLSRVNITVGHYK-RIFCSNMMKSNQDIF--KNSLTGQMQDIFIENILLCGLVGFSDFYKLDWLQ----SILTWQDQEAGCFGKEEDISHIFEEFL----DAPHKRVKRREKTLTDGCSSHMTGVAVSALGGFLNFYL 340
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. TrEMBL
Match: A0A210PUY5 (UPF0764 protein C16orf89-like OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT16829 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.261e-14
Identity = 88/353 (24.93%), Postives = 151/353 (42.78%), Query Frame = 2 
Query:  146 FVSILLLILSCNASSENICDLSL--QSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSK---KIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDN----------CSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNF-VQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIA-GCSSHTLGLGAASNGAFLQKFLM 1153
             + IL + +    ++ +  D SL  +SL+A    + F   +Y  I+VDGL+G ++ E  L        +  C K       I S+L    + L    E A+  V +    YY + + T+++   + +    L  +      + +     + Y+E+KGD+C   +             C+++ +C ++   S     Y+ THQ +Y  +    KC  K E  +    +    +D+C N+     +   G  +V +   DLFLE V++C G   Y DFL        +Q   +  GCF+ +   +  + R+ RS   KL      R KT+  GC SHT GLG  +   +L    M
Sbjct:    6 LIIILHVCIPLVGTTPSTGDQSLFERSLDATEGLLEFFSADYSSINVDGLFGLRVGEGQL-----LDAIDVCEKKPTCPFSILSRLTALAVKLGTTCERALPYVEQADPAYYERFMQTIDAPYRLPYRVTTLSDDE----VESVTIGKNSLYDEDKGDACYARLLGTYEEGGCRIGKCNVTKNCVDMMT-SKGTSRYVTTHQLLYFIVMETVKCREKVEEFLGDKGVASFQKDLCTNIYKEALEATSG-GKVMESEKDLFLERVLLC-GTLGYEDFLKEDWIKMTLQWPDSRTGCFKPRYHSSIFTGRSERSNMRKL-----LREKTMKDGCLSHTSGLGFGTFCLYLHHLTM 341
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. TrEMBL
Match: G3VD67 (Uncharacterized protein OS=Sarcophilus harrisii OX=9305 GN=LOC100915752 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.382e-14
Identity = 83/324 (25.62%), Postives = 143/324 (44.14%), Query Frame = 2 
Query:  221 LEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHT--WKLLHA-NHRGYNFQVLPAKSAAFYNEEKGDSCM-------KEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKC----FLKHESHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNP-NGCFEVKNFKNTISKRAMRSISNKLHVVER--RRSKTIA-GCSSHTLGLGAASNGAFL 1138
            L A+ K+  F+   +  +++DG+ GF +LE  L       +++K  + +      L   ++ + KI++  + ++ +            +  F+ +     WKL ++ NH   +       ++  ++EE  DSCM       K+    C++++ C  L    P   EY  +HQ IY        C    FL+ E +++V          C N++A N K    E     ++ D+F+E ++ CG    Y DF  H     +   Q P  GCF  K + N  SK+ +R   ++   + R  RR K IA GCSSH   +  A+ G FL
Sbjct:   35 LPALEKATSFMEKTFRELNLDGVSGFWVLEVQLK-----GVLEKWGQETA-----LKPLRLRVEKIMKKLLPLITRATIYLKLSDSKYLKEFQEILQPGFWKLPYSWNHTNGSMIYSKFDNSESFSEELSDSCMMLLLGTKKDHLQPCTVTDLCKELMT-KPNCMEYTLSHQLIYFLFAKLKGCSDGLFLQSEYYMDV---------FCANMMALNLK--TEEDGFPFLSRDIFMENIMFCGLS-GYSDFYKHRWLQSILTWQRPKEGCFG-KPYDN--SKQLLRDAEDQQQSLRRVKRREKRIADGCSSHNTAVAVAALGGFL 332
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. TrEMBL
Match: A0A4X2KPN7 (Uncharacterized protein OS=Vombatus ursinus OX=29139 GN=LOC114025773 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.220e-13
Identity = 81/333 (24.32%), Postives = 129/333 (38.74%), Query Frame = 2 
Query:  188 SENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLE----NYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCM-------KEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKC----FLKHESHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNP-NGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFL 1138
            SEN   +    L A+ K+  F+   +  +++DG+ GF +LE      L    +   +K      + I  KL      L  I    I +       +     +    F N+ H+W  ++ +     F      ++ F++EE  DSCM       KE    C++++ C  L    P    Y  +HQ +Y        C    FL+ + ++++          C N++A N K    E     +  DLF+E ++ CG    Y DF        +   Q P  GCF           R  +     L  V+RR      GCSSH  G+  A+ G FL
Sbjct:   24 SENKVAIGRMILPALEKATSFMEKRFRELNLDGVVGFWVLEVQLKGVLEKWGQEPALKPLSLRVENIVKKL------LPLITRATIYLKLSDSMYFKEFQETLQPGFWNLPHSWSQINTSMIYSKFD-----NSDFFSEELSDSCMALLLGTKKEGLQPCTVTDVCRELMT-KPGCTGYTLSHQLLYFLFAKMKGCSDGLFLQSKYYMDI---------FCANMMALNLK--TEEVGYPFLDRDLFMENIMFCGIS-GYSDFYKPRWLQIILTWQQPKEGCFGKPYDNRKQLPRVGKDQQQSLRRVKRREKGFSDGCSSHKTGVAVAALGGFL 332
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. TrEMBL
Match: A0A2Y9HWF9 (UPF0764 protein C16orf89 homolog OS=Neomonachus schauinslandi OX=29088 GN=CUNH16orf89 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.744e-13
Identity = 80/323 (24.77%), Postives = 140/323 (43.34%), Query Frame = 2 
Query:  221 LEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHT--WKLLHANHRGYNFQVLPA-KSAAFYNEEKGDSCMKEI----TDN---CSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKC----FLKHESHINVSDLKMKLEDVCVNLLATNRKI-LVGETEVNKMTADLFLEIVVICG-GQFRYLDFLTHAAFNFVQKIQNPN-GCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFL 1138
            L A+ ++  FL+     I++DG+ GF++LE  L  +          +       +L   ++ + K++E  + ++ +            +  F+ +     WKL HA        V P  +    ++EE+ DSC+ ++    TD+   C +S+ C  L    P    Y  +HQ ++  L     C    F + + ++N+          C N++  NR+   +G       T D+F+E ++ CG G F  LDF        +   Q P  GCF     K+ +SK A++   + L  V+RR  +   GCSSH   +  A+ G FL
Sbjct:   41 LSALERATSFLKKRLPEINLDGVVGFRVLEVQLKGV----------QEKWAWDPQLQWPRLRVGKLVEKLVPLLHRSIFYLKLSDPKYLREFQPIIQPGFWKLPHAWTSTDASMVYPTFEPWDSFSEERSDSCLVQLLGTGTDSSQPCRLSDFCRTLMT-KPGCSGYCLSHQLLFFLLARMKGCTGGLFCQSQHYMNL---------FCANMMDLNRRAEAIG---YAYPTRDIFMENIMFCGIGGF--LDFYKLRWLEAILNWQKPQEGCFGRPAAKDELSK-AIQRQQHVLRRVKRREKQFTDGCSSHNTAMAVAALGGFL 337
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. TrEMBL
Match: A0A0B6ZMU5 (Uncharacterized protein OS=Arion vulgaris OX=1028688 GN=ORF71356 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.203e-13
Identity = 89/344 (25.87%), Postives = 151/344 (43.90%), Query Frame = 2 
Query:  227 AISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMK----------EITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHI---NVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRA-MRSISNKLHVV------ERR---------------RSKTIAG-CSSHTLGLGAASNGAFLQKFL 1150
            A SK+V FL  +Y  I++DGL+G +L +  +    R   + + H     + S+L   K  +SK+ E A+  V ++   YY + L T+++   V +  +    +       V P    + Y+E++GD C                 C+I++ C+  +V  P   +Y  TH  +Y     +N C  + E HI   NVS L+    + C  +    + +    T VN ++ DLF+E  V+C G   + DF +      V   QN  GCF + N  N I  +A +  I+NK  ++      E R               R K++ G C +H  GL   + G +++  +
Sbjct:   41 ATSKTVSFLEEDYSAINLDGLFGIRLCQGSVIGSIRDCKLPEFH-CPNDLISRLEIMKEQISKMAEYAMPYVQQQDALYYKQFLKTIDAPYIVNYIPEKFEES------TVEPGFENS-YDEDRGDKCFAMMFGTYSDQVRTYPKCTITDDCWT-YVTRPNSSKYKITHDLLYFIFGEKNGCVGEIEKHIHKENVSSLRELERNFCHKIYMEAKDMSKFGT-VNVLSQDLFMEQTVLC-GILGFEDFFSRKWIYMVLSWQNAVGCFTLPN--NMIKVQATLNDIANKQRILLTMLNNEAREIDKAGSGETGRQLLREKSMNGDCLAHKTGLAFGTMGTYIRHLI 371
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Cavefish
Match: si:ch211-76l23.7 (chromosome 2 C16orf89 homolog [Source:NCBI gene;Acc:103033375])

HSP 1 Score: 59.6918 bits (143), Expect = 1.950e-9
Identity = 81/355 (22.82%), Postives = 143/355 (40.28%), Query Frame = 2 
Query:  221 LEAISKSVRFLRFNYVRIDVDGLYGFQLLENYL----HTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMN-SFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCM-------KEITDNCSISNSCYNLFV--GSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSDLKMKLED----VCVNLLATNRKILVGETEVNKMTADLFLEIVVICG----GQFRYLDFLTHAAFNFVQKIQNPNGCFE--------VKNFKNTISKRA-MRSISNKLHVVE-------------RRRSKTIA-GCSSHTLGLGAASNGAFLQKFL 1150
            LE++SK V F       I++DG+ G+ +L+  L     + P    V    +++     K       L + +  A++ + +    YY +    ++ SF  +   W    +      +  L  KS   Y+E+ GD CM       K+    C ++ SC +     G P    Y  +HQ +Y  +     C    +  + +S + + +E      C N++ +N   +     +     D+F+E +++CG      F   D+L H     +Q      GCF          + F +T  KRA  R  + K H  +             +RR KT+  GCSSH  G+  ++ G +L  +L
Sbjct:   33 LESLSKGVSFFEKQSGNINLDGVVGYVILQAQLLEATRSWPHSDFVSLSQRSTAMSLIK------KLDRSLTHAVRSLQQTDPKYYKEFEPILDTSFWVLPQEWS---STDPSLVYSSL--KSTECYDEQLGDKCMTLLLGTWKDNGTPCIVTKSCRDTMTRFGCP---HYSLSHQLLYFMIGTMKGCSWMLKGDMRLSRINITVEHYQRIFCSNMMKSNLDSI--SNGITGQIQDIFIENILLCGLAGFSDFYKADWLQH----ILQWQDRELGCFGKDEDYSQMFEEFLDTPHKRAKRRDKAMKEHCSQMFEEFLDIPHKRVKRREKTLKDGCSSHMTGVAVSTLGGYLNFYL 367
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Nematostella
Match: EDO43037 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZR6])

HSP 1 Score: 56.6102 bits (135), Expect = 7.673e-9
Identity = 53/226 (23.45%), Postives = 94/226 (41.59%), Query Frame = 2 
Query:  563 PAKSAAFYNEEKG----DSCMKEI-------TDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSD----LKMKLEDVCVN----LLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFK-----------NTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFL 1150
            P +  AF +++ G      CM+ +       +  C+++++C+   +  P    Y  THQA+Y     E  C    +  + +++    L+   + +C +    +LA  R  + G+T+      DL+LE+  +C G   Y  FL+      + + Q PNGC+   N+             T   RA RS+     + E        GC SH  G+  A    +L+  L
Sbjct:  171 PKRHLAFNDKKAGTQAPQPCMEALFGSAGPGSKTCNVTDACWTA-MRRPGALGYELTHQALYFMFGEERGCIKAFQDRLRLANEPASLRPVYDRICADTFYQMLALER--MRGKTQ---QEVDLYLEMSAVC-GLLGYSQFLSFKRMGRLLRWQMPNGCYGDPNYDALLNEAGGVLYQTSHSRATRSLLTVKELEE--------GCESHITGVATALISVYLRWVL 381
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Nematostella
Match: EDO43038 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZR7])

HSP 1 Score: 56.6102 bits (135), Expect = 8.092e-9
Identity = 53/226 (23.45%), Postives = 94/226 (41.59%), Query Frame = 2 
Query:  563 PAKSAAFYNEEKG----DSCMKEI-------TDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSD----LKMKLEDVCVN----LLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFK-----------NTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFL 1150
            P +  AF +++ G      CM+ +       +  C+++++C+   +  P    Y  THQA+Y     E  C    +  + +++    L+   + +C +    +LA  R  + G+T+      DL+LE+  +C G   Y  FL+      + + Q PNGC+   N+             T   RA RS+     + E        GC SH  G+  A    +L+  L
Sbjct:  171 PKRHLAFNDKKAGTQAPQPCMEALFGSAGPGSKTCNVTDACWTA-MRRPGALGYELTHQALYFMFGEERGCIKAFQDRLRLANEPASLRPVYDRICADTFYQMLALER--MRGKTQ---QEVDLYLEMSAVC-GLLGYSQFLSFKRMGRLLRWQMPNGCYGDPNYDALLNEAGGVLYQTSHSRATRSLLTVKELEE--------GCESHITGVATALISVYLRWVL 381
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Medaka
Match: si:ch211-76l23.7 (chromosome 8 C16orf89 homolog [Source:NCBI gene;Acc:101172164])

HSP 1 Score: 61.2326 bits (147), Expect = 6.449e-10
Identity = 86/349 (24.64%), Postives = 145/349 (41.55%), Query Frame = 2 
Query:  173 SCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLH----TIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAK-SAAFYNEEKGDSCM-------KEITDNCSISNSCYNLFV--GSPIGEEYIATHQAIYLELYIENKC--FLKHE---SHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPN-GCFEVKN--FKNTISKRAMRSISNKLHVVERRRSKTIA-GCSSHTLGLGAASNGAFLQKFL 1150
            +C++ +E I D+    L ++S  V FL   +  I++DG  GF LL+  L     T P    V    + S     +   Q ++ + I   A+K    KY   +  +LS   +F      WK+           V P+  SA  Y+E+  D C+       KE    C ++  C +     G P    Y  +HQ +Y  +     C   LK +   S  NV++ + +    C N++ TN+ ++     + + T D+F E ++ICG    + DF        +  +Q+   GCF   +      I    +  +     V  +RR K +  GCSSH   +   + G +L  +L
Sbjct:   21 ACSSRAEVIDDV----LSSLSLGVSFLERQHEHINLDGGVGFVLLQAELKEAVGTWPHTDPVSWAQRTSAVALLRRLDQALDKAFI---ALKRNDPKYYKEFEPLLSW--TF------WKIPLEGDSTDPSLVYPSTISAECYDEQLSDKCLTLLLGTWKENGTPCIVTKPCLDTMTRFGCP---HYSLSHQLLYFLVGRMGGCSNLLKGDTRASRANVTEQQYQ-NIFCSNMMKTNQDVVAAG--LTEQTVDIFTENILICG-LAGFSDFFKADWLQHILGLQDKEVGCFGRDHSILSQIIGDELLEQLQPHRRV--KRREKILPDGCSSHMTAVAVGALGGYLNFYL 345
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Planmine SMEST
Match: SMESG000053422.1 (SMESG000053422.1)

HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0
Identity = 346/347 (99.71%), Postives = 346/347 (99.71%), Query Frame = 2 
Query:  116 MIIFVKMKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT 1156
            MIIFVKMKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAKKYKNYYYKMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVS LKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT
Sbjct:    1 MIIFVKMKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAKKYKNYYYKMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSHLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT 347
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Planmine SMEST
Match: SMESG000053422.1 (SMESG000053422.1)

HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0
Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 2 
Query:  134 MKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT 1156
            MKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAKKYKNYYYKMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVS LKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT
Sbjct:    1 MKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNYVRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAKKYKNYYYKMLSTMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSHLKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT 341
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Planmine SMEST
Match: SMESG000032159.1 (SMESG000032159.1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.318e-12
Identity = 84/336 (25.00%), Postives = 145/336 (43.15%), Query Frame = 2 
Query:  164 LILSCNASSENICDLSLQSLEAISKSV-RFLRFNYVRID---VDGLYGFQLLENYLHTIP---RHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXML-STMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSDLKMKLEDVCVNLLATNRKILV---GETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFL 1138
            L+ S N S     D      + I KS+ R LRF+ ++ID   +D ++G + L  Y+       + +  K+  K  K +   + K K  L K+I   I+  +K  KN    M+ +     + +R   +    NH   +   L   +  F N +      +E  + C++  SC    + +    EY  THQ +Y  L  +++C+ + ES  N+S  ++++ D+C       +K+++       V K   DLF+EIV +C     ++ FL       +   QN +GC     F N ISK   R +    ++         + C  HT G+ A   G +L
Sbjct:   16 LLKSLNLSESMPTDSPKTPNQGIIKSIYRLLRFSDIQIDELNIDAIFGLKSLHVYVTKTVLCLKETFNKQKTKILKVLIESMGKIKKILEKLISHWIENSSKFLKNEMTFMIVNKWEPMRVLRSVGEFPLENHSKVSADKLEI-NLCFQNIQTE----REKPEICTVDESCIKQMLFNRSFREYFLTHQILYTILMQQSRCWREVESSYNISINQVQI-DLCSKSYYFAQKLIIHNGTSLNVAKENKDLFMEIVYVCAS-IGFIQFLDLVPLETILFWQNSSGC-----FGNKISKSPSRKLLWDFYIG--------SNCQVHTTGVAAGLMGIYL 331
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Planmine SMEST
Match: SMESG000032159.1 (SMESG000032159.1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.024e-11
Identity = 89/353 (25.21%), Postives = 154/353 (43.63%), Query Frame = 2 
Query:  128 VKMKINFVSILLL-----ILSCNASSENICDLSLQSLEAISKSV-RFLRFNYVRID---VDGLYGFQLLENYLHTIP---RHSIVKKCHKNSKKIFSKLFKQKMNLSKIIEMAIKVVAXXXXXXXXXML-STMNSFKNVRHTWKLLHANHRGYNFQVLPAKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKCFLKHESHINVSDLKMKLEDVCVNLLATNRKILV---GETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTISKRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFL 1138
            +KM+ +  +ILLL     + S N S     D      + I KS+ R LRF+ ++ID   +D ++G + L  Y+       + +  K+  K  K +   + K K  L K+I   I+  +K  KN    M+ +     + +R   +    NH   +   L   +  F N +      +E  + C++  SC    + +    EY  THQ +Y  L  +++C+ + ES  N+S  ++++ D+C       +K+++       V K   DLF+EIV +C     ++ FL       +   QN +GC     F N ISK   R +    ++         + C  HT G+ A   G +L
Sbjct:    1 MKMERSTEAILLLFTISLLKSLNLSESMPTDSPKTPNQGIIKSIYRLLRFSDIQIDELNIDAIFGLKSLHVYVTKTVLCLKETFNKQKTKILKVLIESMGKIKKILEKLISHWIENSSKFLKNEMTFMIVNKWEPMRVLRSVGEFPLENHSKVSADKLEI-NLCFQNIQTE----REKPEICTVDESCIKQMLFNRSFREYFLTHQILYTILMQQSRCWREVESSYNISINQVQI-DLCSKSYYFAQKLIIHNGTSLNVAKENKDLFMEIVYVCAS-IGFIQFLDLVPLETILFWQNSSGC-----FGNKISKSPSRKLLWDFYIG--------SNCQVHTTGVAAGLMGIYL 333
[Close]
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Planmine SMEST
Match: SMESG000041522.1 (SMESG000041522.1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.019e-7
Identity = 38/145 (26.21%), Postives = 63/145 (43.45%), Query Frame = 2 
Query:  584 YNEEKGDSCMKEI-----TDNCSISNSCYNLFVGSPIGEEYIATHQAIYLELYIENKC---FLKHESHINVSD-LKMKLEDVCVNLLATNRKILVGETEVNKMTADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEV 991
            Y E  GD CM  +      D C+I+  C+ +         Y  THQ  Y  + IE +C     K  + +  S  + M ++ +C N+   +   L+ E  +N   +DL +E + +CG    Y  F      + +   Q PNGC+ +
Sbjct:  104 YGERFGDDCMSLLMGTSGNDKCTITLKCWKMMTAHGF-SNYSLTHQVFYFLIGIETECNNNIEKMAASVKGSQTMPMIMDRLCSNVWRESN--LLVENGLNLDYSDLLMEQIGLCGYAGYYKSFSNPKWIDAIISWQRPNGCYGI 245
The following BLAST results are available for this feature:
BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
C3H16orf896.443e-822.80si:ch211-76l23.7 [Source:NCBI gene;Acc:566173][more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
AU0210923.727e-1025.62expressed sequence AU021092 [Source:MGI Symbol;Acc... [more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q3UST5|CP089_MOUSE2.607e-925.62UPF0764 protein C16orf89 homolog OS=Mus musculus O... [more]
sp|A7MCS3|CP089_DANRE4.864e-722.80UPF0764 protein C16orf89 homolog OS=Danio rerio OX... [more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210PUY51.261e-1424.93UPF0764 protein C16orf89-like OS=Mizuhopecten yess... [more]
G3VD672.382e-1425.62Uncharacterized protein OS=Sarcophilus harrisii OX... [more]
A0A4X2KPN71.220e-1324.32Uncharacterized protein OS=Vombatus ursinus OX=291... [more]
A0A2Y9HWF91.744e-1324.77UPF0764 protein C16orf89 homolog OS=Neomonachus sc... [more]
A0A0B6ZMU54.203e-1325.87Uncharacterized protein OS=Arion vulgaris OX=10286... [more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
si:ch211-76l23.71.950e-922.82chromosome 2 C16orf89 homolog [Source:NCBI gene;Ac... [more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO430377.673e-923.45Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO430388.092e-923.45Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
si:ch211-76l23.76.449e-1024.64chromosome 8 C16orf89 homolog [Source:NCBI gene;Ac... [more]
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BLAST of UPF0764 protein C16orf89 homolog isoform X3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000053422.10.000e+099.71SMESG000053422.1[more]
SMESG000053422.10.000e+099.71SMESG000053422.1[more]
SMESG000032159.19.318e-1225.00SMESG000032159.1[more]
SMESG000032159.11.024e-1125.21SMESG000032159.1[more]
SMESG000041522.11.019e-726.21SMESG000041522.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30012198 ID=SMED30012198|Name=UPF0764 protein C16orf89 homolog isoform X3|organism=Schmidtea mediterranea sexual|type=transcript|length=1296bp
CTTCCGATCTCATAAATCGATAATTTGTGCCGACCACACAGTCACCAAGA
GCGCTCAATATTTATTAGATAAATAAATAATCATTCTTAATCTGAGTGAA
GTCACTGATATCTATATGATTATTTTTGTAAAAATGAAAATCAATTTTGT
TTCAATTCTATTGCTCATTTTGAGTTGTAATGCATCTTCAGAAAATATTT
GTGATTTATCTTTACAAAGTTTGGAAGCCATAAGCAAATCAGTTAGATTT
CTCAGATTCAATTATGTTCGAATTGATGTCGACGGACTATACGGATTTCA
ACTGCTAGAAAATTATTTGCATACGATTCCCAGACATTCCATTGTAAAAA
AATGCCACAAAAATTCCAAAAAAATATTTTCAAAACTTTTCAAACAGAAA
ATGAACCTATCGAAAATAATTGAAATGGCTATAAAGGTTGTGGCCAAGAA
ATACAAAAATTATTATTATAAAATGCTAAGTACAATGAATTCGTTTAAAA
ATGTAAGACATACTTGGAAACTTCTTCATGCCAATCATCGAGGTTACAAT
TTTCAAGTTTTGCCAGCAAAATCGGCTGCTTTCTACAATGAAGAAAAAGG
CGACTCATGTATGAAAGAAATAACTGACAATTGTTCCATATCTAACAGTT
GCTACAACCTATTTGTCGGATCTCCTATCGGAGAGGAATACATTGCGACC
CACCAGGCGATATATTTAGAACTCTACATAGAGAATAAGTGTTTTCTGAA
ACATGAATCACATATAAATGTTTCAGATCTAAAAATGAAACTGGAAGACG
TTTGTGTGAATCTTTTGGCTACCAACAGGAAGATTCTTGTTGGCGAAACA
GAAGTCAATAAAATGACAGCTGACTTGTTCCTAGAAATAGTTGTCATATG
TGGGGGTCAGTTTCGATATTTGGATTTTCTCACTCATGCAGCATTTAATT
TCGTTCAAAAAATTCAGAATCCCAACGGATGTTTTGAAGTTAAAAATTTT
AAAAATACCATTAGCAAAAGAGCAATGAGATCAATTTCAAATAAACTTCA
TGTTGTGGAGAGAAGAAGGAGTAAAACGATAGCTGGCTGTTCGAGTCACA
CATTGGGCCTTGGAGCGGCTTCAAATGGAGCATTTTTACAAAAGTTTTTG
ATGACTTAATAAAACAATTTGAAAGATGCGTTTCATTTTTTCTCAGATAT
TAAAAATAACCTCTATATAGTATGACTAAGAATTTTGTTGAATACTTTAT
GGATATAAGTAAATTTTGTGATTCAAGATGAAAATAAATGTAAAAC
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protein sequence of SMED30012198-orf-1

>SMED30012198-orf-1 ID=SMED30012198-orf-1|Name=SMED30012198-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=348bp
MIIFVKMKINFVSILLLILSCNASSENICDLSLQSLEAISKSVRFLRFNY
VRIDVDGLYGFQLLENYLHTIPRHSIVKKCHKNSKKIFSKLFKQKMNLSK
IIEMAIKVVAKKYKNYYYKMLSTMNSFKNVRHTWKLLHANHRGYNFQVLP
AKSAAFYNEEKGDSCMKEITDNCSISNSCYNLFVGSPIGEEYIATHQAIY
LELYIENKCFLKHESHINVSDLKMKLEDVCVNLLATNRKILVGETEVNKM
TADLFLEIVVICGGQFRYLDFLTHAAFNFVQKIQNPNGCFEVKNFKNTIS
KRAMRSISNKLHVVERRRSKTIAGCSSHTLGLGAASNGAFLQKFLMT*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000026gut
PLANA:0000034epidermis
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR031751DUF4735
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031751Protein of unknown function DUF4735PFAMPF15882DUF4735coord: 56..342
e-value: 1.2E-34
score: 120.1
IPR031751Protein of unknown function DUF4735PANTHERPTHR33539FAMILY NOT NAMEDcoord: 21..342
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.802