Zinc finger MYND domain-containing protein 12
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012107 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Human
Match: ZMYND12 (zinc finger MYND-type containing 12 [Source:HGNC Symbol;Acc:HGNC:21192]) HSP 1 Score: 299.671 bits (766), Expect = 1.076e-98 Identity = 151/328 (46.04%), Postives = 218/328 (66.46%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEG--IGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 A PKG L CE+C+ PA C C VTYYC V HQ+ADW SIH+KIC + L+ ++PF +EEER++ ++ ++ +IE TI +K LF+GKHE AVP ALQ L+F +++YGL+SVELVPAYL+L+EAS+GL R+ QAEEYL QAQWTVLKS DC + S LHR LGLLY AK + A +LA+DI+++S +GT+++ TSGGY+ +A +F ++D+AD L T+V IW +L + L+ + I + +G++ T LDEAQEAEAI++L SI +IR + + P +L M Y+++ + S+A+++ Sbjct: 8 AVPKGRRLCCEVCEAPAERVCAACTVTYYCGVVHQKADWDSIHEKICQLLIPLRTSMPFYNSEEERQHGLQQLQQRQKYLIEFCYTIAQKYLFEGKHEDAVPAALQSLRFRVKLYGLSSVELVPAYLLLAEASLGLGRIVQAEEYLFQAQWTVLKSTDCSNATHSLLHRNLGLLYIAKKNYEEARYHLANDIYFASCAFGTEDIRTSGGYFHLANIFYDLKKLDLADTLYTKVSEIWHAYLNNHYQVLS-QAHIQQMDLLGKLFENDT-----GLDEAQEAEAIRILTSILNIRESTSDKAPQKTIFVLKILVMFYYLMMNSSKAQEY 329
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Human
Match: ZMYND12 (zinc finger MYND-type containing 12 [Source:HGNC Symbol;Acc:HGNC:21192]) HSP 1 Score: 80.8777 bits (198), Expect = 5.591e-18 Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKK 303 A PKG L CE+C+ PA C C VTYYC V HQ+ADW SIH+KIC + L+ ++PF +EEER++ ++ ++ Sbjct: 8 AVPKGRRLCCEVCEAPAERVCAACTVTYYCGVVHQKADWDSIHEKICQLLIPLRTSMPFYNSEEERQHGLQQLQQR 83
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Zebrafish
Match: zmynd12 (zinc finger, MYND-type containing 12 [Source:ZFIN;Acc:ZDB-GENE-041114-133]) HSP 1 Score: 236.498 bits (602), Expect = 3.664e-74 Identity = 121/338 (35.80%), Postives = 203/338 (60.06%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAATCGIE 1089 ANPKG LCE+CQ+PA LQCT C VT+YC+++HQ+ADW SIH+K C + ++ +P ++ + K+ + KK +IE+ +K + + + +P AL + + VYG +VELVPAYL+L++A+IGL L QA+EYL++A+W V+K+ DC ++ QLHR LG L++A G +AL + A+D++Y+ +G D+++TSGGY+LMA+VF+KQN+ DIA L T V W L ++ ++ P+ + +EAQ EA ++L+ I + +P + A L+ML+ + ++ ++A ++ +++ G++ Sbjct: 9 ANPKGEKKLCEICQKPAKLQCTKCLVTFYCNLDHQQADWTSIHEKACPLLVSINTPVPSGTLSDQNHHHKETL-KKQKCLIEMAHLEARKWVSMKRFQDVLPAALLFQHWIMRVYGSCTVELVPAYLLLAQANIGLGSLSQAQEYLSKAEWIVMKTADCSHTVLHQLHRTLGRLHAAMGKQASALTHFANDVYYAIEMFGLDSIVTSGGYFLMADVFLKQNKPDIAHSLYTEVAGSWHTHLCKLMDGISQSATQPD--------------ECFNEAQCVEADQMLSCILEFEEQCVKPRPEQLTMLAHSLAMLWLLRDNYTKALEYGKKAEVLIQGVK 331
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Zebrafish
Match: zmynd12 (zinc finger, MYND-type containing 12 [Source:ZFIN;Acc:ZDB-GENE-041114-133]) HSP 1 Score: 234.187 bits (596), Expect = 2.820e-73 Identity = 119/338 (35.21%), Postives = 202/338 (59.76%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAATCGIE 1089 ANPKG LCE+CQ+PA LQCT C VT+YC+++HQ+ADW SIH+K C + ++ +P ++ + K+ + KK +IE+ +K + + + +P AL + + VYG +VELVPAYL+L++A+IG+ L QA+EYL++A+W V+K+ DC ++ QLHR LG L++A G +AL + A+D++Y+ +G D+++TSGGY+LMA+VF+KQN+ DIA L T V W L ++ ++ P+ + +E Q EA ++L+ I + +P + A L+ML+ + ++ ++A ++ +++ G++ Sbjct: 9 ANPKGEKKLCEICQKPAKLQCTKCLVTFYCNLDHQQADWTSIHEKACPLLVSINTPVPSGTLSDQNHHHKETL-KKQKCLIEMAHLEARKWVSMKRFQDVLPAALLFQHWIMRVYGSCTVELVPAYLLLAQANIGIGSLSQAQEYLSKAEWIVMKTADCSHTVLHQLHRTLGRLHAAMGKQASALTHFANDVYYAIEMFGLDSIVTSGGYFLMADVFLKQNKPDIAHSLYTEVAGSWHTHLCKLMDGISQSATQPD--------------ECFNEVQCVEADQMLSCILEFEEQCVKPRPEQLTMLAHSLAMLWLLRDNYTKALEYGKKAEVLIQGVK 331
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Zebrafish
Match: egln1b (egl-9 family hypoxia-inducible factor 1b [Source:ZFIN;Acc:ZDB-GENE-040718-338]) HSP 1 Score: 49.2914 bits (116), Expect = 2.744e-6 Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 100 LCELCQR-PAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEER 273 CELC + ++C C+ ++YCS EHQR DW H ++C EA K+ P + EEE+ Sbjct: 17 FCELCGKMENLMKCGRCRSSFYCSKEHQRQDW-KKHKRVCK--EADKQQQPVGEEEEEQ 72
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Zebrafish
Match: egln1b (egl-9 family hypoxia-inducible factor 1b [Source:ZFIN;Acc:ZDB-GENE-040718-338]) HSP 1 Score: 48.9062 bits (115), Expect = 5.934e-6 Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 100 LCELCQR-PAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEER 273 CELC + ++C C+ ++YCS EHQR DW H ++C EA K+ P + EEE+ Sbjct: 17 FCELCGKMENLMKCGRCRSSFYCSKEHQRQDW-KKHKRVCK--EADKQQQPVGEEEEEQ 72
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Xenopus
Match: pygl (phosphorylase, glycogen, liver [Source:Xenbase;Acc:XB-GENE-478383]) HSP 1 Score: 306.605 bits (784), Expect = 5.900e-101 Identity = 153/329 (46.50%), Postives = 220/329 (66.87%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEK--QTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISAL-VLSMLYFILNDKSRAEDF 1053 +NPKGV L CELC PA LQC+ CKVTYYC +HQ+ADW+SIH+KIC + L+ PF + EER + +++ + +I++T +K L+ G+H +P A+ L F+I+V+GLA+VELVPAYLIL+EA+IGL LPQAEEYL+QA WTVLK+ DC +IRS+LHR LGLLYSAKG+ +L + ++D++++S GT+++ +GGY+ MA +F +QN+MDIAD L T V IW L +++ + E ++ +EK + LDE QEAEA+++L++I IR P AK + L L+ML+FI D +AE+F Sbjct: 39 SNPKGVKLECELCNSPAHLQCSACKVTYYCDSDHQQADWVSIHEKICQLLIPLRIAQPFSSSAEERSHSLEQLLLRKKHLIDLTLKEAQKHLYGGRHADVIPAAMHSLSFTIDVFGLATVELVPAYLILAEANIGLGHLPQAEEYLSQAYWTVLKTTDCSNAIRSKLHRNLGLLYSAKGEFEESLRHFSNDVYFASETAGTNHMSVTGGYFHMANIFFRQNKMDIADSLYTEVTDIWHAHLSKLLNV---------HVNESSRSMSSLEKDQENLDENQEAEALQILSAICDIREQAPKKDP-AKIMHILHTLTMLHFIAMDWPKAEEF 357
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Mouse
Match: Zmynd12 (zinc finger, MYND domain containing 12 [Source:MGI Symbol;Acc:MGI:2140259]) HSP 1 Score: 291.197 bits (744), Expect = 1.950e-95 Identity = 147/327 (44.95%), Postives = 213/327 (65.14%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSS-LTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 A PKG L CE+C+ PA CT C VTYYC HQ+ADW SIH KIC + L+ +PF +EEER++ ++ ++ +IE T+ +K LF+G+HE AVP AL L+F + V+GL+SVELVPAYL+L+EAS+GL R+ QAEEYL+QAQWTVLKS DC + S LHR LGLLY AK + + A +LA+DI+++S YGT+++ TSGGY+ +A +F +M++AD L T+V IW +L + L + + + +G+ V LDEAQEAEAI++L S I+ + P + LS+LY+++ + S+A+++ Sbjct: 8 AVPKGRRLSCEVCEAPAERMCTACTVTYYCGPVHQKADWDSIHAKICQLLIPLRTTMPFYNSEEERQHGLQQLQRRQKHLIEFCYTVAQKYLFEGRHEDAVPAALHSLRFRMNVHGLSSVELVPAYLLLAEASLGLGRIVQAEEYLSQAQWTVLKSTDCSNATHSLLHRNLGLLYIAKKNLDEARYHLANDIYFASCAYGTEDIRTSGGYFHLANIFYGLKKMELADTLYTKVSEIWYTYLNSHYQALLEARSQQTDLLGKQF-----VNDTGLDEAQEAEAIRILTSTLIIQESTSTKAPQKSILILKTLSILYYLMLECSKAKEY 329
BLAST of Zinc finger MYND domain-containing protein 12 vs. UniProt/SwissProt
Match: sp|Q9H0C1|ZMY12_HUMAN (Zinc finger MYND domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ZMYND12 PE=1 SV=3) HSP 1 Score: 299.671 bits (766), Expect = 5.168e-98 Identity = 151/328 (46.04%), Postives = 218/328 (66.46%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEG--IGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 A PKG L CE+C+ PA C C VTYYC V HQ+ADW SIH+KIC + L+ ++PF +EEER++ ++ ++ +IE TI +K LF+GKHE AVP ALQ L+F +++YGL+SVELVPAYL+L+EAS+GL R+ QAEEYL QAQWTVLKS DC + S LHR LGLLY AK + A +LA+DI+++S +GT+++ TSGGY+ +A +F ++D+AD L T+V IW +L + L+ + I + +G++ T LDEAQEAEAI++L SI +IR + + P +L M Y+++ + S+A+++ Sbjct: 8 AVPKGRRLCCEVCEAPAERVCAACTVTYYCGVVHQKADWDSIHEKICQLLIPLRTSMPFYNSEEERQHGLQQLQQRQKYLIEFCYTIAQKYLFEGKHEDAVPAALQSLRFRVKLYGLSSVELVPAYLLLAEASLGLGRIVQAEEYLFQAQWTVLKSTDCSNATHSLLHRNLGLLYIAKKNYEEARYHLANDIYFASCAFGTEDIRTSGGYFHLANIFYDLKKLDLADTLYTKVSEIWHAYLNNHYQVLS-QAHIQQMDLLGKLFENDT-----GLDEAQEAEAIRILTSILNIRESTSDKAPQKTIFVLKILVMFYYLMMNSSKAQEY 329
BLAST of Zinc finger MYND domain-containing protein 12 vs. TrEMBL
Match: A0A1S3J1M0 (zinc finger MYND domain-containing protein 12 OS=Lingula unguis OX=7574 GN=LOC106169409 PE=4 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 2.713e-135 Identity = 187/326 (57.36%), Postives = 250/326 (76.69%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 ANPKGV L+CELCQ+PAF+QCT C+VTYYC VEHQ+ADW+ IH+KIC + L+ IPF+ ++EER++RKD++ ++ MI++TRT G+KLLF+G+HEQAVP A+Q L+F+IEV+GLAS+ELVP+YLIL EASIGL RL QAEEYL QAQWTV+K+P+C +I+S+L+R LGLLY+AKG+ +L LA DIF++S E+ D++ TSGGY+ MA VF +QNRM++AD L RV W ++L+ IVS T P GIG + EI Q E++ LDEAQEAEA +VLN+IY IR Q N KP A L+MLYFIL++ +A+++ Sbjct: 7 ANPKGVKLVCELCQKPAFIQCTKCRVTYYCGVEHQKADWLGIHEKICQLLIPLRTPIPFLASDEERQHRKDQLLQRQRHMIDLTRTTGQKLLFEGRHEQAVPAAMQSLRFAIEVHGLASIELVPSYLILGEASIGLGRLSQAEEYLMQAQWTVVKTPECSDAIKSKLYRNLGLLYAAKGEYEESLRQLADDIFHASMEFSPDDIRTSGGYFHMANVFFRQNRMEVADSLYARVTDSWYDYLQKIVSVRTATPIDTTGIGAIAMEINQEEEEGLDEAQEAEAKQVLNAIYDIRDQQSNKKPEIVAKICHALAMLYFILHEVEKAKEY 332
BLAST of Zinc finger MYND domain-containing protein 12 vs. TrEMBL
Match: A0A1S3J4B7 (zinc finger MYND domain-containing protein 12-like OS=Lingula unguis OX=7574 GN=LOC106170089 PE=4 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 4.197e-135 Identity = 187/326 (57.36%), Postives = 250/326 (76.69%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 ANPKGV L+CELCQ+PAF+QCT C+VTYYC VEHQ+ADW+ IH+KIC + L+ IPF+ ++EER++RKD++ ++ MI++TRT G+KLLF+G+HEQAVP A+Q L+F+IEV+GLAS+ELVP+YLIL EASIGL RL QAEEYL QAQWTV+K+P+C +I+S+L+R LGLLY+AKG+ +L LA DIF++S E+ D++ TSGGY+ MA VF +QNRM++AD L RV W ++L+ IVS T P GIG + EI Q E++ LDEAQEAEA +VLN+IY IR Q N KP A L+MLYFIL++ +A+++ Sbjct: 7 ANPKGVKLVCELCQKPAFIQCTKCRVTYYCGVEHQKADWLGIHEKICQLLIPLRTPIPFLASDEERQHRKDQLLQRQRHMIDLTRTTGQKLLFEGRHEQAVPAAMQSLRFAIEVHGLASIELVPSYLILGEASIGLGRLSQAEEYLMQAQWTVVKTPECSDAIKSKLYRNLGLLYAAKGEYEESLRQLADDIFHASMEFSPDDIRTSGGYFHMANVFFRQNRMEVADSLYARVTDSWYDYLQKIVSVRTATPIDTTGIGAIAMEINQEEEEGLDEAQEAEAKQVLNAIYDIRDQQSNKKPEIVAKICHALAMLYFILHEVEKAKEY 332
BLAST of Zinc finger MYND domain-containing protein 12 vs. TrEMBL
Match: K1PK64 (Zinc finger MYND domain-containing protein 12 OS=Crassostrea gigas OX=29159 GN=CGI_10014058 PE=4 SV=1) HSP 1 Score: 397.512 bits (1020), Expect = 6.605e-134 Identity = 193/353 (54.67%), Postives = 261/353 (73.94%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAATCGIELNSLLHVVDQMKSVL 1134 ANPKG+ L+CELCQ+PA++QCT C+VTYYC VEHQ+ADW+ IH+KIC S+ AL++ PF+ +EEER+ R+ ++ K MI +TRT G+KLLF+G+HEQAVP A+Q L+F+I+V+GLAS+ELVP+YLIL EASIGL RL QAEEYLAQAQWTVLK+P+C +I+S+L+R LGLLY+AKG+ + AL LA DI++SS E+GT ++ TSGGY+ MA VF +Q RMD+AD L + V IW L IV T P +GIG ++ E + E+ +LDEAQEAEAI+VLN+IY +R Q N KP A+ L+MLYFIL D +A++F ++ A+ G ++L V + +L Sbjct: 7 ANPKGLKLVCELCQKPAYIQCTKCRVTYYCGVEHQKADWMGIHEKICQSLIALRQAAPFLPSEEERQKREKQLLSKKEHMIVLTRTTGQKLLFEGRHEQAVPAAMQSLRFAIDVHGLASIELVPSYLILGEASIGLGRLNQAEEYLAQAQWTVLKTPECSNAIKSKLYRNLGLLYAAKGEYDEALRQLADDIYHSSEEFGTGDIRTSGGYFHMANVFFRQGRMDVADSLYSEVSNIWYNHLLRIVQLRTKTPATQQGIGPLIPEQLE-EEDSLDEAQEAEAIQVLNAIYDMREHQSNRKPQDLALVCHALAMLYFILYDIQKAKEFGRKAVVASEGDPNDNLSRSVVEFMKIL 358
BLAST of Zinc finger MYND domain-containing protein 12 vs. TrEMBL
Match: A0A267EH26 (MYND-type domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008343g1 PE=4 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.699e-131 Identity = 189/339 (55.75%), Postives = 251/339 (74.04%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSI-------------RRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 AN KG DLLCELCQ+PAF+QC+ C+VTYYC EHQRADWI IH KIC + L++ +PF+ +E++RR +++E+ ++ +MI ITRT G+KLLF+ E+AVP ALQ LKF+I+V+G +SVELVP+YLIL EASIGL RL QAEEYL+QAQWTVLK+ + +I+SQLHR LGLL+SAKGD ALENLA DIF++S EYGT+++ SGGY+ MA +FM +N+ +IA DL RV IW + L IV ++T P+IP+G+GEVVAEITQ EK+ LDEAQ+AEA+K+L+SIYS+ + + A +AL L MLYF+L D+ + +F Sbjct: 16 ANAKGTDLLCELCQKPAFIQCSKCRVTYYCGPEHQRADWIGIHAKICDELAVLRKPVPFLTSEKDRREKREELIQQQLRMIVITRTTGQKLLFENHFEEAVPAALQSLKFAIDVHGSSSVELVPSYLILGEASIGLQRLSQAEEYLSQAQWTVLKTDNPSNAIKSQLHRNLGLLFSAKGDYGRALENLAIDIFHASDEYGTEDIRVSGGYFSMANIFMYKNKQEIAYDLFGRVIDIWYDHLWRIVQAMTAPPDIPDGLGEVVAEITQEEKEHLDEAQQAEALKILHSIYSLLVETSEAVDSGSEAESVWESRRMYTAKTALCLLMLYFVLGDREKIGEF 354
BLAST of Zinc finger MYND domain-containing protein 12 vs. TrEMBL
Match: A0A210PX77 (Zinc finger MYND domain-containing protein 12 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT21023 PE=4 SV=1) HSP 1 Score: 389.808 bits (1000), Expect = 8.600e-131 Identity = 188/336 (55.95%), Postives = 257/336 (76.49%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAATCG 1083 ANPKGV L CELCQ+PAF+QCT C+VTYYC VEHQ+ADW+ IH+KIC S+ L++ PF+ +EEER+ R + ++ K +MI++TRT G+KLLF+G+HEQAVP A+Q L+F+I+V+GLAS+ELVP+YLIL EASIGL RL QAEEYLAQAQWT LK+P+C +I+S+L+R LGLLY+AKG + +L A DI+++S ++GTD++ TSGGYY MA VF +Q RMDIAD L +V IW + L IV T P++P+GIG V++E + E+ +LDEAQEAEA++VLN+IY +R Q N + A + L+MLYFIL D ++A++F ++ A+ G Sbjct: 7 ANPKGVKLACELCQKPAFIQCTKCRVTYYCGVEHQKADWMGIHEKICQSLIQLRQASPFLPSEEERQKRINHLNVKKRQMIDLTRTTGQKLLFEGRHEQAVPAAMQSLRFAIDVHGLASIELVPSYLILGEASIGLGRLSQAEEYLAQAQWTALKTPECSNAIKSKLYRNLGLLYAAKGQYDDSLRQHADDIYHASEDFGTDDIRTSGGYYHMANVFFRQGRMDIADTLYRQVAEIWYKHLLQIVKVRTATPDVPKGIGPVISEESLEEEDSLDEAQEAEAVQVLNAIYDMREHQSNRRAQDLAKVSHALAMLYFILMDITKAKEFGRKAVVASEG 342
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Cavefish
Match: zmynd12 (zinc finger, MYND-type containing 12 [Source:ZFIN;Acc:ZDB-GENE-041114-133]) HSP 1 Score: 219.55 bits (558), Expect = 1.051e-67 Identity = 115/328 (35.06%), Postives = 202/328 (61.59%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPE--IPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 A+PKGV LCELCQ+PA L+C+ C+VT+YC HQ+ADW SIH K C + ++ +P++ + +R +++ K+L +++E++R + + +G++ +++P A L +I++YG +VELVPAYL+L+EA++G L +A+ YL+QA+WTVLK+PDC +++ +LHR LG L++ G +AL + A+ ++Y+S E+G ++ T+ GY++MA+VF KQ + DIA L ++ + LT+K + + AE+ Q+ + L EA E + + + + + P A +S +ML+F+ ++ S+A +F Sbjct: 9 ASPKGVKRLCELCQKPAHLRCSHCRVTFYCDAAHQQADWNSIHKKACELLIHIRAPVPYLPLKADRDHQQTLAQKRLEQLMEVSRAEARVQVVEGRYTESLPAAQLSLHCAIDLYGHDAVELVPAYLLLAEANMGSGSLSKAQSYLSQAEWTVLKTPDCSRTVLLELHRNLGRLHTFTGSYQSALLHFANYVYYASEEFGLNSTETARGYFMMADVFGKQEKPDIASSLYSQA--------RHPHRHLTYKCRSVLKDKDKAQCAEVDQMLRVML-EAHEQQQQQQQHQDARAHPARSDSLPQAAVLSH-SRAMLWFLCSNSSKALEF 326
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Nematostella
Match: EDO42363 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1R4]) HSP 1 Score: 353.984 bits (907), Expect = 1.324e-120 Identity = 172/326 (52.76%), Postives = 233/326 (71.47%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDF 1053 ANPKGV L+CELCQ+PAF+QCT C+VTYYC EHQRADW+ IH+KIC + AL+ IPF+ +E+ER++RK + + +MI++ RT G+KLLF+GK+++AVP ALQ LKFSI++YGL+S+ELVP+YLIL EASIGL +L QAEEYLAQA+WT LK+P C +I+S+L+R LGLL +AKG+ + AL LA DI++SS ++GTD++ TSGGY+ MA VF +QN++D+A L +V IW E L +V T P P GIG LDEAQEAEAI+V+++I +R Q P ++ML F+L + +A DF Sbjct: 8 ANPKGVKLVCELCQKPAFVQCTDCRVTYYCGPEHQRADWLGIHEKICQLLMALRSPIPFLGSEDERQHRKQQQIIRQKQMIDLCRTEGQKLLFEGKYDRAVPAALQSLKFSIDIYGLSSIELVPSYLILGEASIGLGKLSQAEEYLAQAEWTALKTPGCDNAIKSRLYRNLGLLNAAKGNFSDALTLLADDIYHSSLQHGTDDIHTSGGYFHMANVFNRQNKLDVAFSLYNQVTDIWYEHLSKLVGQRTQTPAKPSGIGPAFNSGIPTGFDVLDEAQEAEAIQVIHAILELREQQSVQTPSVMCKIYFTVAMLQFVLGNMQKARDF 333
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Medaka
Match: ENSORLT00000005859.2 (pep primary_assembly:ASM223467v1:7:8763134:8770695:-1 gene:ENSORLG00000004657.2 transcript:ENSORLT00000005859.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 171.014 bits (432), Expect = 2.065e-49 Identity = 92/258 (35.66%), Postives = 150/258 (58.14%), Query Frame = 1 Query: 76 ANPKGV----DLLCELCQRPAFLQCTLCKVTYYCSV-------EHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHD--IFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIV 810 +N G+ + +CELCQ PA LQC + +VT+YC+V EHQRADW+ IH++I L IP + E + +IEI + + LF+GKH++A+P AL CL+++ +V+G SV A+L+L+EA+IGL L A E L+QA+W +L++P+C S+ +L+R G L++A G+ A A+D IF+++ E+G ++ +T+G +L+ +VF K + + L V IW + L ++ Sbjct: 5 SNSSGISQRNEKVCELCQSPACLQCAMWQVTFYCTVFCHCTHAEHQRADWVGIHERI----SKLFVPIPIVVYFHELFRLE---------LIEICTLVVQSKLFEGKHQEALPAALLCLRYTEDVHGPQSVHQAHAFLLLAEANIGLGNLALAAELLSQAEWVLLETPECRNSLLQRLNRNFGCLHAATGNLEDARFYFANDVNIFFATVEFGVNSTVTAGSLFLVVDVFAKMKKTVMTRSLYQEVARIWYDHLTKLL 249
BLAST of Zinc finger MYND domain-containing protein 12 vs. Planmine SMEST
Match: SMESG000023516.1 (SMESG000023516.1) HSP 1 Score: 729.169 bits (1881), Expect = 0.000e+0 Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 1 Query: 76 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAATCGIELNSLLHVVDQMKSVLS 1137 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAA CGIELNSLLHVVDQMKSVLS Sbjct: 14 ANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRADWISIHDKICSSVEALKRNIPFIKTEEERRNRKDEVHKKLGKMIEITRTIGKKLLFQGKHEQAVPTALQCLKFSIEVYGLASVELVPAYLILSEASIGLNRLPQAEEYLAQAQWTVLKSPDCPKSIRSQLHRKLGLLYSAKGDANAALENLAHDIFYSSTEYGTDNVLTSGGYYLMAEVFMKQNRMDIADDLLTRVCTIWMEFLKDIVSSLTFKPEIPEGIGEVVAEITQVEKQTLDEAQEAEAIKVLNSIYSIRRTQLNCKPFAKAISALVLSMLYFILNDKSRAEDFLAESDAAACGIELNSLLHVVDQMKSVLS 367 The following BLAST results are available for this feature:
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of Zinc finger MYND domain-containing protein 12 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 1
BLAST of Zinc finger MYND domain-containing protein 12 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Zinc finger MYND domain-containing protein 12 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of Zinc finger MYND domain-containing protein 12 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012107 ID=SMED30012107|Name=Zinc finger MYND domain-containing protein 12|organism=Schmidtea mediterranea sexual|type=transcript|length=1207bpback to top protein sequence of SMED30012107-orf-1 >SMED30012107-orf-1 ID=SMED30012107-orf-1|Name=SMED30012107-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=368bp MSLPPPGYPLYPLANPKGVDLLCELCQRPAFLQCTLCKVTYYCSVEHQRAback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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