slc35c-4
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30012061 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of slc35c-4 vs. Ensembl Human
Match: SLC35C2 (solute carrier family 35 member C2 [Source:HGNC Symbol;Acc:HGNC:17117]) HSP 1 Score: 115.931 bits (289), Expect = 1.273e-30 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + L G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D ++ SPD Sbjct: 171 LGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD 317
BLAST of slc35c-4 vs. Ensembl Human
Match: SLC35C2 (solute carrier family 35 member C2 [Source:HGNC Symbol;Acc:HGNC:17117]) HSP 1 Score: 116.316 bits (290), Expect = 1.454e-30 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + L G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D ++ SPD Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD 338
BLAST of slc35c-4 vs. Ensembl Human
Match: SLC35C2 (solute carrier family 35 member C2 [Source:HGNC Symbol;Acc:HGNC:17117]) HSP 1 Score: 116.316 bits (290), Expect = 1.454e-30 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + L G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D ++ SPD Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD 338
BLAST of slc35c-4 vs. Ensembl Human
Match: SLC35C2 (solute carrier family 35 member C2 [Source:HGNC Symbol;Acc:HGNC:17117]) HSP 1 Score: 116.316 bits (290), Expect = 1.454e-30 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + L G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D ++ SPD Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD 338
BLAST of slc35c-4 vs. Ensembl Human
Match: SLC35C2 (solute carrier family 35 member C2 [Source:HGNC Symbol;Acc:HGNC:17117]) HSP 1 Score: 116.316 bits (290), Expect = 2.007e-30 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + L G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D ++ SPD Sbjct: 221 LGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD 367
BLAST of slc35c-4 vs. Ensembl Celegans
Match: Y47G6A.7 (pep chromosome:WBcel235:I:3502738:3508421:1 gene:WBGene00021637.1 transcript:Y47G6A.7b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y47G6A.7) HSP 1 Score: 97.8265 bits (242), Expect = 4.962e-24 Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 105 GLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRI 518 + HP+DM+ HVQPWM++ ++P+ EG E+ +S F F + + ++ G +LAF ME +EYL++ TS +TL I GI+KE+ L LA +NKD + +N GL+ CL G+ LH + K Q++SRI Sbjct: 255 AVRHPLDMVAHVQPWMMIPIIPMIWLFEGAEINWNS-VFSFKGHYDPWLVMGLIAGGGLLAFCMEMSEYLLLVNTSGITLNIFGIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLHGMNK-----RHQRLSRI 386
BLAST of slc35c-4 vs. Ensembl Celegans
Match: Y47G6A.7 (pep chromosome:WBcel235:I:3502738:3508421:1 gene:WBGene00021637.1 transcript:Y47G6A.7b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y47G6A.7) HSP 1 Score: 97.8265 bits (242), Expect = 4.962e-24 Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 105 GLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRI 518 + HP+DM+ HVQPWM++ ++P+ EG E+ +S F F + + ++ G +LAF ME +EYL++ TS +TL I GI+KE+ L LA +NKD + +N GL+ CL G+ LH + K Q++SRI Sbjct: 255 AVRHPLDMVAHVQPWMMIPIIPMIWLFEGAEINWNS-VFSFKGHYDPWLVMGLIAGGGLLAFCMEMSEYLLLVNTSGITLNIFGIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLHGMNK-----RHQRLSRI 386
BLAST of slc35c-4 vs. Ensembl Celegans
Match: Y47G6A.7 (pep chromosome:WBcel235:I:3502738:3508421:1 gene:WBGene00021637.1 transcript:Y47G6A.7a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y47G6A.7) HSP 1 Score: 95.5153 bits (236), Expect = 4.113e-23 Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 105 GLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLH 467 + HP+DM+ HVQPWM++ ++P+ EG E+ +S F F + + ++ G +LAF ME +EYL++ TS +TL I GI+KE+ L LA +NKD + +N GL+ CL G+ LH Sbjct: 255 AVRHPLDMVAHVQPWMMIPIIPMIWLFEGAEINWNS-VFSFKGHYDPWLVMGLIAGGGLLAFCMEMSEYLLLVNTSGITLNIFGIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLH 374
BLAST of slc35c-4 vs. Ensembl Celegans
Match: Y47G6A.7 (pep chromosome:WBcel235:I:3502738:3508421:1 gene:WBGene00021637.1 transcript:Y47G6A.7a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y47G6A.7) HSP 1 Score: 95.5153 bits (236), Expect = 4.113e-23 Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 105 GLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLH 467 + HP+DM+ HVQPWM++ ++P+ EG E+ +S F F + + ++ G +LAF ME +EYL++ TS +TL I GI+KE+ L LA +NKD + +N GL+ CL G+ LH Sbjct: 255 AVRHPLDMVAHVQPWMMIPIIPMIWLFEGAEINWNS-VFSFKGHYDPWLVMGLIAGGGLLAFCMEMSEYLLLVNTSGITLNIFGIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLH 374
BLAST of slc35c-4 vs. Ensembl Fly
Match: CG14971 (gene:FBgn0035449 transcript:FBtr0073143) HSP 1 Score: 117.087 bits (292), Expect = 1.140e-30 Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEI----PEISPDD 545 LGL +PIDMIY++QPWMI L+PL GIEG + + + H S E + GA+LAF ME +E+L++ +TSSLTL I+GI K+I L LAV I KD ++ IN++GLI CL GI H++ K+ + Q+ +++ E SP + Sbjct: 261 LGLHNPIDMIYYMQPWMIASLVPLVIGIEGAGLIAVIEDLHNHTSNEITWAIARISAGALLAFLMEFSEFLVLCKTSSLTLSIAGIFKDICQLALAVTIRKDHLSVINYIGLIICLAGIVCHLLHKYSNMKEMQRQQELQLDNDQEESSPGE 412
BLAST of slc35c-4 vs. Ensembl Zebrafish
Match: slc35c2 (solute carrier family 35 member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]) HSP 1 Score: 100.523 bits (249), Expect = 2.566e-24 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIK 479 LGL +PID +YH+QP M L L PL EGL V+++ K F + L L G +LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV+ D+++++N++G CL GISLH+ +K Sbjct: 189 LGLQNPIDTMYHLQPLMFLGLFPLFLLNEGLSVSTTEKLFRVSELSHLLYSLVTLSVGGMLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVEFLGDKMSTVNWLGFAVCLSGISLHIGLK 314
BLAST of slc35c-4 vs. Ensembl Zebrafish
Match: slc35c2 (solute carrier family 35 member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]) HSP 1 Score: 100.523 bits (249), Expect = 2.675e-24 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIK 479 LGL +PID +YH+QP M L L PL EGL V+++ K F + L L G +LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV+ D+++++N++G CL GISLH+ +K Sbjct: 189 LGLQNPIDTMYHLQPLMFLGLFPLFLLNEGLSVSTTEKLFRVSELSHLLYSLVTLSVGGMLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVEFLGDKMSTVNWLGFAVCLSGISLHIGLK 314
BLAST of slc35c-4 vs. Ensembl Zebrafish
Match: slc35c2 (solute carrier family 35 member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]) HSP 1 Score: 100.523 bits (249), Expect = 2.701e-24 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIK 479 LGL +PID +YH+QP M L L PL EGL V+++ K F + L L G +LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV+ D+++++N++G CL GISLH+ +K Sbjct: 189 LGLQNPIDTMYHLQPLMFLGLFPLFLLNEGLSVSTTEKLFRVSELSHLLYSLVTLSVGGMLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVEFLGDKMSTVNWLGFAVCLSGISLHIGLK 314
BLAST of slc35c-4 vs. Ensembl Zebrafish
Match: slc35c2 (solute carrier family 35 member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]) HSP 1 Score: 96.6709 bits (239), Expect = 1.591e-23 Identity = 61/144 (42.36%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIK-FRYSNDDQKVSRIEIPE 530 LGL +PID +YH+QP M L L PL EGL V+++ K F + L L G +LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV+ D+++++N++G CL GISLH+ +K +R + V + + E Sbjct: 189 LGLQNPIDTMYHLQPLMFLGLFPLFLLNEGLSVSTTEKLFRVSELSHLLYSLVTLSVGGMLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVEFLGDKMSTVNWLGFAVCLSGISLHIGLKTYRNKGNGPMVRHLPVRE 332
BLAST of slc35c-4 vs. Ensembl Zebrafish
Match: slc35c2 (solute carrier family 35 member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]) HSP 1 Score: 94.7449 bits (234), Expect = 8.194e-23 Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSND 497 LGL +PID +YH+QP M L L PL EGL V+++ K F + L L G +LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV+ D+++++N++G CL GISLH+ +K Y N Sbjct: 188 ELGLQNPIDTMYHLQPLMFLGLFPLFLLNEGLSVSTTEKLFRVSELSHLLYSLVTLSVGGMLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVEFLGDKMSTVNWLGFAVCLSGISLHIGLK-TYRNK 319
BLAST of slc35c-4 vs. Ensembl Xenopus
Match: ENSXETT00000029795.1 (solute carrier family 35 member C2-like [Source:NCBI gene;Acc:101731373]) HSP 1 Score: 97.4413 bits (241), Expect = 2.668e-24 Identity = 60/134 (44.78%), Postives = 89/134 (66.42%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQ 503 LGL +PID ++H+QP M L L PL GIEGL V +S + F +S + L L L G +LAF + +E+L+VS+TSSLTL I+GI KE+ +L LA + DE++ +N++G C+ GI+LHV +K +S ++ Sbjct: 102 LGLQNPIDTMFHLQPVMFLSLFPLFVGIEGLHVATSEQLFCSQDSHQLLALLATLALGGLLAFGLGFSEFLLVSKTSSLTLSIAGIFKELCVLLLATHLLGDELSILNWLGFAVCIAGIALHVALKTTHSRVEE 235
BLAST of slc35c-4 vs. Ensembl Mouse
Match: Slc35c2 (solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]) HSP 1 Score: 105.531 bits (262), Expect = 1.124e-26 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDD 500 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + LL G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAIFEGLHLSTSEKIFRFQDTGLLLWVLGSLLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGD 324
BLAST of slc35c-4 vs. Ensembl Mouse
Match: Slc35c2 (solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]) HSP 1 Score: 105.531 bits (262), Expect = 1.124e-26 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDD 500 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + LL G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAIFEGLHLSTSEKIFRFQDTGLLLWVLGSLLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGD 324
BLAST of slc35c-4 vs. Ensembl Mouse
Match: Slc35c2 (solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]) HSP 1 Score: 105.531 bits (262), Expect = 1.124e-26 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDD 500 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + LL G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAIFEGLHLSTSEKIFRFQDTGLLLWVLGSLLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGD 324
BLAST of slc35c-4 vs. Ensembl Mouse
Match: Slc35c2 (solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]) HSP 1 Score: 105.531 bits (262), Expect = 1.124e-26 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDD 500 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + LL G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAIFEGLHLSTSEKIFRFQDTGLLLWVLGSLLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGD 324
BLAST of slc35c-4 vs. UniProt/SwissProt
Match: sp|Q9NQQ7|S35C2_HUMAN (Solute carrier family 35 member C2 OS=Homo sapiens OX=9606 GN=SLC35C2 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 6.985e-30 Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + L G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D ++ SPD Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD 338
BLAST of slc35c-4 vs. UniProt/SwissProt
Match: sp|Q8VCX2|S35C2_MOUSE (Solute carrier family 35 member C2 OS=Mus musculus OX=10090 GN=Slc35c2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.862e-26 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDD 500 LGL +PID ++H+QP M L L PL + EGL +++S K F F ++ L + LL G ILAF + +E+L+VSRTSSLTL I+GI KE+ L LA + D+I+ +N++G CL GISLHV +K +S D Sbjct: 192 LGLQNPIDTMFHLQPLMFLGLFPLFAIFEGLHLSTSEKIFRFQDTGLLLWVLGSLLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGD 324
BLAST of slc35c-4 vs. UniProt/SwissProt
Match: sp|Q8H184|PT106_ARATH (Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana OX=3702 GN=At1g06470 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 7.592e-9 Identity = 40/130 (30.77%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFG---FHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKF 482 GL +P + V P ++ +++G+ L + S+F F + F++L+G LAF M TEY++VS TS++T+ I+G++KE + +AV DE + VGL+ ++G+SL K+ Sbjct: 253 FGLKNPFIFMSCVAP-----VMAIATGLLSLLLDPWSEFRDNKYFDSGAHFARTCFLMLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKY 377
BLAST of slc35c-4 vs. UniProt/SwissProt
Match: sp|Q10354|YDB1_SCHPO (Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC22E12.01 PE=3 SV=2) HSP 1 Score: 52.373 bits (124), Expect = 5.555e-7 Identity = 41/142 (28.87%), Postives = 66/142 (46.48%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTE-GLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIE 521 H S+P ++ + P M LFLL + GL +F E G + V+L LAF M +E+ ++ +TS +TL + GI+KEI + + D + IN VGL+ L GI ++ + N + +E Sbjct: 230 HPWTSNPFTSLFALTPLMFLFLL-----VAGLIFEGPVRFIESPAWKEFGPFMSVVILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVITLCGIGVYNYYRITKGNKKEAEKEVE 366
BLAST of slc35c-4 vs. UniProt/SwissProt
Match: sp|Q9SUV2|PT432_ARATH (Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana OX=3702 GN=At4g32390 PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 2.464e-6 Identity = 34/133 (25.56%), Postives = 66/133 (49.62%), Query Frame = 3 Query: 114 HPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISL--HVIIKFRYSNDDQK 506 +PI +Y+V P ++FL +E L + + F F F + ++ AFA+ +L+V +TS+LT+ ++G++K+ L+ + + KD + +N G LG++ H ++ + D QK Sbjct: 197 NPITSLYYVAPCCLVFLFFPWIFVE-LPILRETSSFHFD--------FVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPLNLFGYGLAFLGVAYYNHCKLQALKAKDAQK 320
BLAST of slc35c-4 vs. TrEMBL
Match: A0A0H3YKF8 (Slc35c-4 OS=Schmidtea mediterranea OX=79327 GN=slc35c-4 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 4.302e-100 Identity = 149/155 (96.13%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 81 LFVIDLHLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPDD 545 LF GLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPDD Sbjct: 71 LFTQHDKFGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPDD 225
BLAST of slc35c-4 vs. TrEMBL
Match: A0A0H3YFJ8 (Slc35c-3 OS=Schmidtea mediterranea OX=79327 GN=slc35c-3 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 9.123e-40 Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKV 509 +GL +PIDMIYH+QPWMIL LLPLS+ EG+E+ S+ FF F + + + F L+ GA++AF +EC+EYL+++ TSSLTL I+GIIKE+ +L LA KIN D++N+IN +GL C+LGI LHV +K +++ V Sbjct: 190 IGLQNPIDMIYHIQPWMILTLLPLSAWFEGIEIISTKDFFRFSDINDLIINFSTLMSGAMIAFCLECSEYLVITHTSSLTLSIAGIIKEVCVLYLATKINGDQLNNINIIGLSICMLGILLHVAMKIKHNKSVNNV 325
BLAST of slc35c-4 vs. TrEMBL
Match: R7T4H5 (TPT domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_224289 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.758e-39 Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVS 512 LG+ HP+DM+YH+QPWM+L LLPL+ G EG + S FGFH S+ +L+ GA LAF +E +E+L+VS+TSSLTL ISGI KEI L LAV INKD ++ IN +GL+ CLLGI++HVI+K +S D+++V Sbjct: 213 LGVHHPLDMMYHIQPWMMLTLLPLAGGFEGRRLAISPHAFGFHESSLLARDMAILMLGAFLAFMLEMSEFLLVSKTSSLTLSISGIAKEIVTLCLAVVINKDPMSPINGIGLVVCLLGITIHVILKAVHSEDEKEVK 349
BLAST of slc35c-4 vs. TrEMBL
Match: A0A4D5RVX6 (Putative solute carrier family 35 member c2 OS=Ixodes scapularis OX=6945 PE=4 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.294e-37 Identity = 70/135 (51.85%), Postives = 97/135 (71.85%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQ 503 +GL +PIDMI+HVQPWMIL LLPL+ EG+ + +S K F FH + +L G++LAF ME +EYL+++ TSSLTL I+GI+KE+ L LAV + DEI+ +NFVGL+ CLLGI+LHV++K SN++ Sbjct: 39 EVGLGNPIDMIFHVQPWMILGLLPLAIAFEGIPIATSEKVFRFHEVEMLVRTGQYVLAGSVLAFFMELSEYLLLTYTSSLTLSIAGIVKEVCTLYLAVNYSGDEISFMNFVGLVICLLGIALHVLVKSLNSNEEN 173
BLAST of slc35c-4 vs. TrEMBL
Match: A0A1I8HNZ9 (TPT domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.893e-37 Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKV 509 LGL++P+DMIYHVQPWM+L LLPLS EG E+ +++ F ++T +LL GA LAF +EC+EYL++SRTSSLTL +SGI KE+ + LA IN D IN +N+ G+ CL GI LH +K S+ D V Sbjct: 207 LGLANPVDMIYHVQPWMVLVLLPLSVAFEGTEIATTANLFRASSATAAFGTVRILLVGAFLAFGLECSEYLLLSRTSSLTLSVSGIFKEVCTIVLAAGINDDVINPVNWAGMALCLSGIGLHCGLKAAASSADATV 342
BLAST of slc35c-4 vs. Ensembl Cavefish
Match: ENSAMXT00000013197.2 (pep primary_assembly:Astyanax_mexicanus-2.0:15:25809036:25860556:1 gene:ENSAMXG00000012384.2 transcript:ENSAMXT00000013197.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 116.701 bits (291), Expect = 6.770e-30 Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSND 497 LGL +PID +YH+QP M L L PL EGL +++S K F L L G LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV D+++++N++G + CL GISLHV +K YS D Sbjct: 189 LGLQNPIDTMYHLQPLMFLGLFPLFVVNEGLGLSTSEKLFRVSELQPLLYSLLTLSVGGTLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVGFMGDKMSTVNWLGFVVCLAGISLHVGLKTYYSKD 320
BLAST of slc35c-4 vs. Ensembl Cavefish
Match: ENSAMXT00000044703.1 (pep primary_assembly:Astyanax_mexicanus-2.0:15:25808986:25818566:1 gene:ENSAMXG00000012384.2 transcript:ENSAMXT00000044703.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 108.612 bits (270), Expect = 4.157e-28 Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPD 542 LGL +PID +YH+QP M L L PL EGL +++S K F L L G LAF + +E+L+VSRTSSLTL I+GI KE+ L LAV D+++++N++G + CL GISLHV +K YS + R +PD Sbjct: 188 ELGLQNPIDTMYHLQPLMFLGLFPLFVVNEGLGLSTSEKLFRVSELQPLLYSLLTLSVGGTLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAVGFMGDKMSTVNWLGFVVCLAGISLHVGLKTYYSKGNGSSLRPLPGRDNPD 335
BLAST of slc35c-4 vs. Ensembl Sea Lamprey
Match: slc35c2 (solute carrier family 35 member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]) HSP 1 Score: 109.383 bits (272), Expect = 2.592e-29 Identity = 60/127 (47.24%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIK 479 LGL +P+D +YH+QP M+ L PL EG+ + + K FGFH+S L L G +LAF + +E+L+VS+TS LTL ISGI KE+ L LA IN D ++ +N+VG CL GISLHV +K Sbjct: 189 ELGLHNPVDALYHLQPLMLAALFPLFLYNEGVSLACTEKLFGFHDSEVLLWSVGTLALGGVLAFGLSFSEFLLVSQTSGLTLSISGIFKEVCTLVLATHINGDIMSPLNWVGFGVCLAGISLHVALK 315
BLAST of slc35c-4 vs. Ensembl Nematostella
Match: EDO40549 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S701]) HSP 1 Score: 106.686 bits (265), Expect = 9.229e-28 Identity = 55/135 (40.74%), Postives = 83/135 (61.48%), Query Frame = 3 Query: 102 LGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQK 506 LGL +P+D IYH+QP M L L PL+ IEG + S + F + + ++ +G LAF + +E++++S TSSLTL ISGI KE+ L LA + DE+N +NF GL+ CL GI++HV+ +++ K Sbjct: 191 LGLHNPLDTIYHLQPLMALALTPLAFTIEGPSMALSEQLFNAPSMHVAITSASMVFFGCFLAFMLSVSEFMLLSHTSSLTLSISGIFKEVCTLSLATEFGGDEMNIVNFCGLVLCLTGIAVHVVTNASKDSENGK 325
BLAST of slc35c-4 vs. Ensembl Medaka
Match: slc35c2 (solute carrier family 35 member C2 [Source:NCBI gene;Acc:101157129]) HSP 1 Score: 106.301 bits (264), Expect = 3.483e-27 Identity = 63/156 (40.38%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDD-------QKVSRIEIPEISPDD 545 LGL +PID +YH+QP M L L PL E L ++ S K F L F L G +LAF + +E+L+VS+TSSLTL ISGI KE+ L LA + DE++ +N++G CL GISLHV +K YS + + S++ +P + + Sbjct: 188 ELGLQNPIDAMYHLQPLMFLGLFPLFLYNEALNLSMSEKLFRVTELRPLLYSLFTLTVGGLLAFGLGFSEFLLVSKTSSLTLSISGIFKEVCTLLLAASLMGDELSMLNWLGFAVCLCGISLHVGLKTYYSKNKLPSLQQHNRSSKLALPLLRQES 343
BLAST of slc35c-4 vs. Ensembl Medaka
Match: slc35c2 (solute carrier family 35 member C2 [Source:NCBI gene;Acc:101157129]) HSP 1 Score: 104.375 bits (259), Expect = 1.154e-26 Identity = 61/135 (45.19%), Postives = 80/135 (59.26%), Query Frame = 3 Query: 99 HLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQ 503 LGL +PID +YH+QP M L L PL E L ++ S K F L F L G +LAF + +E+L+VS+TSSLTL ISGI KE+ L LA + DE++ +N++G CL GISLHV +K YS Sbjct: 188 ELGLQNPIDAMYHLQPLMFLGLFPLFLYNEALNLSMSEKLFRVTELRPLLYSLFTLTVGGLLAFGLGFSEFLLVSKTSSLTLSISGIFKEVCTLLLAASLMGDELSMLNWLGFAVCLCGISLHVGLKTYYSKSKS 322
BLAST of slc35c-4 vs. Planmine SMEST
Match: SMESG000017437.1 (SMESG000017437.1) HSP 1 Score: 300.442 bits (768), Expect = 8.285e-103 Identity = 149/155 (96.13%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 81 LFVIDLHLGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPDD 545 LF GLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPDD Sbjct: 187 LFTQHDKFGLSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKVSRIEIPEISPDD 341
BLAST of slc35c-4 vs. Planmine SMEST
Match: SMESG000055160.1 (SMESG000055160.1) HSP 1 Score: 145.591 bits (366), Expect = 1.136e-42 Identity = 69/134 (51.49%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 108 LSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKV 509 +++PIDMIYH+QPWMIL LLPLS+ EG+E+ S+ FF F + + + F L+ GA++AF +EC+EYL+++ TSSLTL I+GIIKE+ +L LA KIN D++N+IN +GL C+LGI LHV +K +++ V Sbjct: 131 ITNPIDMIYHIQPWMILTLLPLSAWFEGIEIISTKDFFRFSDINDLIINFSTLMSGAMIAFCLECSEYLVITHTSSLTLSIAGIIKEVCVLYLATKINGDQLNNINIIGLSICMLGILLHVAMKIKHNKSVNNV 264
BLAST of slc35c-4 vs. Planmine SMEST
Match: SMESG000055160.1 (SMESG000055160.1) HSP 1 Score: 145.591 bits (366), Expect = 3.910e-42 Identity = 69/134 (51.49%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 108 LSHPIDMIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGAILAFAMECTEYLMVSRTSSLTLCISGIIKEITLLGLAVKINKDEINSINFVGLIFCLLGISLHVIIKFRYSNDDQKV 509 +++PIDMIYH+QPWMIL LLPLS+ EG+E+ S+ FF F + + + F L+ GA++AF +EC+EYL+++ TSSLTL I+GIIKE+ +L LA KIN D++N+IN +GL C+LGI LHV +K +++ V Sbjct: 178 ITNPIDMIYHIQPWMILTLLPLSAWFEGIEIISTKDFFRFSDINDLIINFSTLMSGAMIAFCLECSEYLVITHTSSLTLSIAGIIKEVCVLYLATKINGDQLNNINIIGLSICMLGILLHVAMKIKHNKSVNNV 311 The following BLAST results are available for this feature:
BLAST of slc35c-4 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of slc35c-4 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 4
BLAST of slc35c-4 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of slc35c-4 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of slc35c-4 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of slc35c-4 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of slc35c-4 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of slc35c-4 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of slc35c-4 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of slc35c-4 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of slc35c-4 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of slc35c-4 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of slc35c-4 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of slc35c-4 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30012061 ID=SMED30012061|Name=slc35c-4|organism=Schmidtea mediterranea sexual|type=transcript|length=601bpback to top protein sequence of SMED30012061-orf-1 >SMED30012061-orf-1 ID=SMED30012061-orf-1|Name=SMED30012061-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=141bp MIYHVQPWMILFLLPLSSGIEGLEVTSSSKFFGFHNSTEGLDLFFVLLYGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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