G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30011980 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3U400 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS1343 PE=4 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.597e-74 Identity = 142/332 (42.77%), Postives = 208/332 (62.65%), Query Frame = 1 Query: 190 TNSTVESTPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFTT------ACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKI 1167 TN T TP V IR+ CIP+W+I++ GL GN LT+ VLR + ++ +ST+ YL+ LA+ D+LYL+ S S+ ++IFFFPS VR S C + P L Y+L++ S WL+VAVT +R I VVLPF ++ + A V++TI+ + ++ HF TM + +C+ YF VFP++DL + ++P M+ N I KLR K R + T+ S N G S+ ++K+ NLT+ML+ TN+FF++S+TPLL+YD+V+F +D +A +E+E + GG+LF IERLVYT+WY NF IHF +YCLSGP FR + I Sbjct: 28 TNVTTFVTPPLVSGIRYACIPVWSILLFFGLFGNALTVFVLRAKRLQQSSTSFYLTVLAITDVLYLLTSLVASIANFIFFFPSEVRQISNTFCVLTPFLHYTLAYISVWLLVAVTVERAIWVVLPFQARNICTKRTAKFVVVTIVSVFTLLDTHFFVTMRYIEVQPSYWSCSTTYFADKVFPFLDLLFVAVLPCAIMLIANCLIGWKLRVMRKFRS-GVAATSTSNNNQGGSDK----------REKSTNLTRMLVSTNIFFIVSVTPLLIYDVVFFSVDVRAWAEEDEDVRGGMLFAIERLVYTLWYTNFAIHFLLYCLSGPPFRAEVLVI 348
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3TQP7 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS9870 PE=4 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.634e-71 Identity = 143/349 (40.97%), Postives = 215/349 (61.60%), Query Frame = 1 Query: 163 MNKSVYQNITNSTVESTPQS-------VQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFTTA------CNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKIL 1170 M+ SV N++N++ +S+P S + IR+ IPIW +++ GL GN LT+ VL+ + +K +ST+ YL+ALA+ D+LYL+ S S+ ++I+FFP +R TS C ++P + Y+L++ S WL+VAVT +R I VVLPF + + A V+ ++I+ ++IHF TM + C FT VFPY+DL L+ ++P M+ N I KLR K R + LN + EK K+K+ NLT+ML+ TN+FF++S+TPLL+YD+V+F ID +A +ENE++ GG++FG+ER VYT+WY NF IHF +YCLSGP FR +L Sbjct: 1 MSDSV--NVSNTSTDSSPPSAFDIPLSITAIRYTYIPIWILLLFFGLFGNALTVFVLQAKRLKQSSTSFYLTALAITDMLYLLTSLVTSVANFIYFFPFELRQTSKTFCVLLPFINYTLAYISVWLLVAVTVERAIWVVLPFRAHRICTRRTAKFVVPLLVIVFTILDIHFFITMRYVNISKDKWICKPNSFTDKVFPYLDLLLVAVLPCTIMLIANCLIGWKLRVMLKFRTGT--ASASKTLNSNADPANAEK------KEKSTNLTRMLVSTNVFFIISVTPLLIYDVVFFSIDVKAWAEENEKVRGGIIFGLERFVYTLWYTNFAIHFLLYCLSGPPFRAEVFVLL 339
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3SC23 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS2081 PE=4 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 2.900e-71 Identity = 144/346 (41.62%), Postives = 212/346 (61.27%), Query Frame = 1 Query: 163 MNKSVYQNITNSTVESTPQ-------SVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFTTA------CNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAM 1161 M+ SV N++N + S P S+ IR+ IPIW +++ GL GN LT+ VL+ + +K +ST+ YL+ALA+ D+LYL+ S S+ ++ +FFP +R TS C ++P + Y+L++ S WL+VAVT +R I VVLPF + + A ++ +LI+ ++IHF TM + C FT VFPY+DL L+ ++P M+ N I KLR K R L T LN + + EK K+K+ NLT+ML+ TN+FF++S+TPLL+YD+V+F ID +A +ENE++ GG+LFG+ER VYT+WY NF IHF +YCLSGP FR + Sbjct: 1 MSDSV--NVSNISANSPPPGAFEIPLSITAIRYTYIPIWIMLLFFGLFGNALTVFVLQAKRLKQSSTSFYLTALAITDMLYLLTSLVSSIANFTYFFPFELRQTSKTFCVLLPFINYTLAYISVWLLVAVTVERAIWVVLPFRAHRICTRRTAKFIVPLLLIVFTILDIHFFITMRYVQISKDKWICRPNSFTDKVFPYLDLLLVAVLPCTVMLIANCLIGWKLRVMRKFRTGTL--TGSKTLNSNADSTNTEK------KEKSTNLTRMLVSTNVFFIISVTPLLIYDVVFFSIDVKAWAEENEKVRGGILFGLERFVYTLWYTNFAIHFLLYCLSGPPFRAEVL 336
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A068Y4I9 (Growth hormone secretagogue receptor type 1 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000433200 PE=4 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.452e-70 Identity = 133/319 (41.69%), Postives = 203/319 (63.64%), Query Frame = 1 Query: 211 TPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFTTA------CNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFR 1149 TP + IR+ CIP+W+I++ G+ GN LT+ VLR + ++ +ST+ YL+ALA+ D+LYL+ S S+ ++IFFFPS +R S C P L Y+L++ S WL+V VT +R + VVLPF ++ + A V++ ++I ++IHF TM + C YF+ VFP++DL L+ I+P M+ N I KLR K R + + + ++NN D+ K ++K+ NLT+ML+ TN+FF++S+TPLL+YD+V+F +D +A +E E++ GG++F IER VYT+WY NF IHF +YCLSGP FR Sbjct: 27 TPPLLSGIRYACIPVWSILLCFGIFGNALTVFVLRTKRLQQSSTSFYLTALAITDMLYLLTSLVASIANFIFFFPSELRQLSRTFCVFTPFLSYTLAYISVWLLVTVTVERAVWVVLPFRARHICTKRTAKFVVLLLVIGFTLLDIHFFLTMRYQEVGPGYWLCMTTYFSDKVFPFLDLLLVAILPCAIMLVANCLIGWKLRVMRKFR-------SGTAIGMVSNNNTDQGGGEK--REKSVNLTRMLVSTNVFFIVSVTPLLIYDVVFFSVDVRAWAEEAEEVRGGMIFAIERFVYTLWYTNFAIHFLLYCLSGPPFR 336
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3WQM9 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS3054 PE=4 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.182e-69 Identity = 133/319 (41.69%), Postives = 200/319 (62.70%), Query Frame = 1 Query: 211 TPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFTT------ACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFR 1149 TP + IR+ CIPIW+I++ G+ GN LT+ VLR + ++ +ST+ YL+ALA+ D+LYL+ S S+ ++IFFFP +R S C P L Y+L++ S WL+V VT +R + VVLPF ++ + A V++ ++ ++IHF TM + AC YF+ VFP++DL L+ ++P M+ N I KLR K R ++NN D+ K ++K+ NLT+ML+ TN+FF++S+TPLL+YD+V+F +D +A +E E++ GG++F IERLVYT+WY NF IHF +YCLSGP FR Sbjct: 27 TPPLISGIRYACIPIWSILLCFGIFGNALTVFVLRAKRLQQSSTSFYLTALAITDMLYLLTSLVASIANFIFFFPLELRQLSRTFCVFTPFLSYTLAYISVWLLVTVTVERAVWVVLPFRARHICTKRTAKFVVVLLVFGFTLLDIHFFVTMRYHEVRPKYWACMTTYFSDKVFPFLDLLLVAVLPCTIMLVANCLIGWKLRVMRKFRSGTASGAV-------SNNNTDQGSGDK--REKSINLTRMLVSTNVFFIVSVTPLLIYDVVFFSVDIRAWAEEAEEVRGGMIFAIERLVYTLWYTNFAIHFLLYCLSGPPFR 336
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000060945.1 (SMESG000060945.1) HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1 Query: 163 MNKSVYQNITNSTVESTPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFTTACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKILKLKKSEDHLTNVTKTCVL 1224 MNKSVYQNITNSTVESTPQSVQIIRFLCIPIWAIIIIVGLVGNILTIKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMALIVIITILIIIISVNIHFLWTMTFTTACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKILKLKKSEDHLTNVTKTCVL Sbjct: 1 MNKSVYQNITNSTVESTPQSVQIIRFLCIPIWAIIIIVGLVGNILTIKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMALIVIITILIIIISVNIHFLWTMTFTTACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSPLNPGTSNNHDEKPFVKNFKDKAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKILKLKKSEDHLTNVTKTCVL 354
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000037421.1 (SMESG000037421.1) HSP 1 Score: 230.335 bits (586), Expect = 3.777e-70 Identity = 146/365 (40.00%), Postives = 216/365 (59.18%), Query Frame = 1 Query: 193 NSTVESTPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFT--------TACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREK-NLKKTTKSPLNPG------------------------TSNNHDEKPFVKNFKDKAG----------NLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAA 1158 NST P SV+IIR +CI +WA II+VG+ GNILT+ VL + +TST YL+ LA+VDLLYLI S ++D+ FP+++R ++ + C ++ ++ Y+L++ S WL+VAV+ DRMI V+LPF +K +A I++ I I ++IHF+WT+ F + + F K +FPYVDL L+ I+PF+ M+ N+ I+LK++ + +R+ + T P G +S N E VK FK + +LT+MLL NLFFM S PLL+YD++Y+LID + ++++ GG++FG+ERLVYT WYLNF IHF +YCLSGP FR+ A Sbjct: 9 NSTFPVMPDSVEIIRRICIAVWANIILVGVFGNILTVIVLAGPKLNTTSTTFYLTILAIVDLLYLIFSLGGQMVDFALLFPNTMRQSNELSCKLLNIILYTLAYISVWLLVAVSIDRMIWVLLPFKAKLICTRKVAKIIVSIFCIFFIGIDIHFIWTVKFVKHQTKNNCEVIDNILF-KYIFPYVDLTLIMILPFVIMLISNILIVLKIQKVSVLRQTLHRSSTIPEPNQVGILKVKMNSISSPSRFQDDTNQISISSRNRSESQ-VKFFKRRQSKYSLKDKQTTSLTRMLLSVNLFFMASTAPLLIYDVIYYLIDFKEMIQKYGIYIGGVIFGVERLVYTFWYLNFSIHFLLYCLSGPKFREEA 371
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000000903.1 (SMESG000000903.1) HSP 1 Score: 217.624 bits (553), Expect = 8.691e-66 Identity = 132/357 (36.97%), Postives = 214/357 (59.94%), Query Frame = 1 Query: 202 VESTPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTF-------TTAC--NGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREK--------------NLKKTTK--------SPLNPGTSNNHDEKPFVKNFKD-KAGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKILKL 1176 +E P++V++IR +CI +W II+ G+VGNI+T+ VL++ ++ + ST++YL ALA+ D+++LI S LID++FFFP +R ++ CH+V + +++++ S WL+V VT DRM V+ PF S+KF A I + ++ + +N HF+W+++ T C + + F K +FP DL + I+P + M+ N+ II K++ IREK NL K L P S + + +D K +LTKML+ N+FF++S PLL+YD+ Y+ ID L+K + +L+G L+FG+E+LVYT+WYL+F +HF +YC+SGP FR A+ ++ L Sbjct: 1 MEVIPETVKVIRNICIVVWTFIIVFGVVGNIMTVLVLQYPNMNTMSTSIYLKALAIADMIFLIFSVGGQLIDFMFFFPMQLRQKHSVFCHIVNLFGFTVTYISVWLLVFVTLDRMFWVIFPFKSRKFCTIQTAKSTIAGVCLVCVMINTHFMWSVSSLISVHSNKTICEWSDVRF-KLIFPIFDLIFVNILPSLTMLIANVMIIAKVKHMKNIREKMKTHQHIIKENVISNLSLENKMNSNLLKPPELVPMNSLSIQKASTSDKRRDRKTSSLTKMLMTINIFFIISTLPLLIYDLAYWFIDMNLLIKTDGKLYGPLIFGLEKLVYTLWYLHFSMHFLLYCMSGPKFRWQALYMVGL 356
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000002498.1 (SMESG000002498.1) HSP 1 Score: 209.92 bits (533), Expect = 2.307e-62 Identity = 132/349 (37.82%), Postives = 212/349 (60.74%), Query Frame = 1 Query: 214 PQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFT------TACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREKNLKKTTKSP-------LNP---------GTSNNHDE-------KPFVKNFKDK-AGNLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYTIWYLNFCIHFFVYCLSGPNFRDAAMKIL 1170 P ++ IIR +CI +WAII++ GL GN LT+ VL + ++ST YL+ LA++D+LYLI S ++++ FFP+++R + C + M++++L++ S WL+VAV DRMI V+ PF +K +A I++I+++ +++ +++HF WT+ FT +C + F Y+DL L+ +PF M N II KLR K+R K +K T + P LN +NN +E + + +DK +LTKMLL N+FF++S TPLL Y+I++++ ++LL + E GL+FGIER++YT+WYLNF +HF +YC+SGP FR A+++L Sbjct: 16 PPAIDIIRNICIGVWAIIVLFGLFGNCLTVAVLISPKLNNSSTTFYLTVLALIDILYLIFSLGGQMLNFSIFFPAALRQKNMFACISLSMIRFTLTYISVWLLVAVAIDRMIWVIFPFKAKMICTRKIAKIIVISLIAMLVLIDLHFYWTLKFTYNKGSVNSCELKESYRNPFLYIDLTLVMGLPFFVMSVANSLIISKLREMEKLR-KGMKSTNRIPNDSVIPNLNATSKFSNRKHAKNNNVEEITCEIVKRSTRRRSRDKQTTSLTKMLLSVNIFFLVSTTPLLSYNILFYVPHIKSLLLQFENQLTGLIFGIERIIYTLWYLNFAVHFLLYCMSGPKFRQEAIRLL 363
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000047150.1 (SMESG000047150.1) HSP 1 Score: 189.504 bits (480), Expect = 1.290e-55 Identity = 129/341 (37.83%), Postives = 197/341 (57.77%), Query Frame = 1 Query: 193 NSTVESTPQSVQIIRFLCIPIWAXXXXXXXXXXXXXXKVLRFRHIKSTSTAVYLSALAVVDLLYLICSTNVSLIDYIFFFPSSVRHTSAILCHVVPMLQYSLSHFSAWLVVAVTFDRMILVVLPFSSKKFSNENMAXXXXXXXXXXXXXXXXHFLWTMTFT--------TACNGLYFTKTVFPYVDLALMGIVPFMAMICCNLAIILKLRAQTKIREK-NLKKTTKSPLNPG------------------------TSNNHDEKPFVKNFKDKAG----------NLTKMLLCTNLFFMLSMTPLLVYDIVYFLIDAQALLKENEQLWGGLLFGIERLVYT 1086 NST P SV+IIR +CI +WA II+VG+ GNILT+ VL + +TST YL+ LA+VDLLYLI S ++D+ FP+++R ++ + C ++ ++ Y+L++ S WL+VAV+ DRMI V+LPF +K +A I++ I I ++IHF+WT+ F + + F K +FPYVDL L+ I+PF+ M+ N+ I+LK++ + +R+ + T P G +S N E VK FK + +LT+MLL NLFFM S PLL+YD++Y+LID + ++++ GG++FG+ERLVYT Sbjct: 9 NSTFPVMPDSVEIIRRICIAVWANIILVGVFGNILTVIVLAGPKLNTTSTTFYLTILAIVDLLYLIFSLGGQMVDFALLFPNTMRQSNELSCKLLNIILYTLAYISVWLLVAVSIDRMIWVLLPFKAKLICTRKVAKIIVSIFCIFFIGIDIHFIWTVKFVKHQTKNNCEVIDNILF-KYIFPYVDLTLIMILPFVIMLISNILIVLKIQKVSVLRQTLHRSSTIPEPNQVGILKVKMNSISSPSRFQDDTNQISISSRNRSESQ-VKFFKRRQSKYSLKDKQTTSLTRMLLSVNLFFMASTAPLLIYDVIYYLIDFKEMIQKYGIYIGGVIFGVERLVYT 347 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30011980 ID=SMED30011980|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1449bpback to top protein sequence of SMED30011980-orf-1 >SMED30011980-orf-1 ID=SMED30011980-orf-1|Name=SMED30011980-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=355bp MNKSVYQNITNSTVESTPQSVQIIRFLCIPIWAIIIIVGLVGNILTIKVLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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