E3 ubiquitin-protein ligase MIB2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30011798 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 21Note: Hover over icons to view figure legend
Homology
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Human
Match: EHMT1 (euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]) HSP 1 Score: 50.0618 bits (118), Expect = 1.316e-6 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 1 Query: 172 SLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLIN 483 S LH A + DIC L+ AGA+++ + +PL+E A ENN +E K LI +GA V + + G T LAA G E++ L+SN +N Sbjct: 1 SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME--------AAENN---HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN 93
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Human
Match: EHMT1 (euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]) HSP 1 Score: 52.373 bits (124), Expect = 2.621e-6 Identity = 41/122 (33.61%), Postives = 58/122 (47.54%), Query Frame = 1 Query: 118 FVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLIN 483 VD +D H N S LH A + DIC L+ AGA+++ + +PL+E A ENN +E K LI +GA V + + G T LAA G E++ L+SN +N Sbjct: 727 LVDGIDPNFKMEHQ-NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME--------AAENN---HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN 836
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Human
Match: EHMT1 (euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]) HSP 1 Score: 52.373 bits (124), Expect = 2.655e-6 Identity = 41/122 (33.61%), Postives = 58/122 (47.54%), Query Frame = 1 Query: 118 FVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLIN 483 VD +D H N S LH A + DIC L+ AGA+++ + +PL+E A ENN +E K LI +GA V + + G T LAA G E++ L+SN +N Sbjct: 758 LVDGIDPNFKMEHQ-NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME--------AAENN---HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN 867
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Human
Match: EHMT1 (euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]) HSP 1 Score: 50.8322 bits (120), Expect = 3.838e-6 Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 1 Query: 163 NNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNN 468 N S LH A + DIC L+ AGA+++ + +PL+E A ENN +E K LI +GA V + + G T LAA G E++ L+SN Sbjct: 70 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME--------AAENN---HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 160
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Human
Match: EHMT1 (euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]) HSP 1 Score: 50.8322 bits (120), Expect = 7.411e-6 Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = 1 Query: 163 NNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLIN 483 N S LH A + DIC L+ AGA+++ + +PL+E A ENN +E K LI +GA V + + G T LAA G E++ L+SN +N Sbjct: 391 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME--------AAENN---HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN 486
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Fly
Match: mib2 (gene:FBgn0086442 transcript:FBtr0336840) HSP 1 Score: 55.8398 bits (133), Expect = 9.794e-8 Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 1213 DANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIF 1356 +++ C ICME++ ++ F CGH CS CA+ + CHMCR IL K ++ Sbjct: 1002 ESHFCGICMERKRDVAFLCGHGACSHCAETLRTCHMCRKTILKKINLY 1049
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Fly
Match: mib2 (gene:FBgn0086442 transcript:FBtr0081142) HSP 1 Score: 55.8398 bits (133), Expect = 9.794e-8 Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 1213 DANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIF 1356 +++ C ICME++ ++ F CGH CS CA+ + CHMCR IL K ++ Sbjct: 1002 ESHFCGICMERKRDVAFLCGHGACSHCAETLRTCHMCRKTILKKINLY 1049
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Fly
Match: mib2 (gene:FBgn0086442 transcript:FBtr0336841) HSP 1 Score: 55.8398 bits (133), Expect = 9.794e-8 Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 1213 DANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIF 1356 +++ C ICME++ ++ F CGH CS CA+ + CHMCR IL K ++ Sbjct: 1002 ESHFCGICMERKRDVAFLCGHGACSHCAETLRTCHMCRKTILKKINLY 1049
BLAST of E3 ubiquitin-protein ligase MIB2 vs. UniProt/SwissProt
Match: sp|Q4UMH6|Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=RF_0381 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 6.230e-9 Identity = 68/281 (24.20%), Postives = 123/281 (43.77%), Query Frame = 1 Query: 178 LHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCR---NEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLME 1011 LH AV D+ S L++ GA VN N G + L ++ S ++ +LI GADV+A+ NG T A G+ +L+ L+ N + N +I ++ LIK D +N + I H N + + L+ +K+ + + E++L+ A + L L++ + + + +GET+L F K L+K+ K ++ K ++ + A E+ +L+ L+IH ++ + DG +AL +E Sbjct: 741 LHYAVYDGNLDLVSLLISHGADVNAKTNSGETILYSAVDYG-----------SPDLVYLLIAYGADVNAKTDNGETVLHYAVESGNLDLVSLLIHNGANVNNAKTI-LHFAAKSGNLNLVNWLIKNKADIHAKTNSGETILHFAAESGNLNLVNWLIKNKADIHAKTNSGETILHFAAKSGNLNLVNWLIKNKADIHAKTNSGETILHFAAKSGNLNLVNWLIKN---KADIHAKTNSGETILHFAAESGNLNLVSLLIHNGTDINTKTDDGLTALHYAVE 1006
BLAST of E3 ubiquitin-protein ligase MIB2 vs. UniProt/SwissProt
Match: sp|Q9SAL0|RGLG4_ARATH (E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.983e-7 Identity = 21/62 (33.87%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 1174 HGRLPTFLNPAGND-ANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIF 1356 + LP+ +PA + C IC+ R ++ F CGH+ C DC +I NC +CR+ I ++ +++ Sbjct: 339 NAELPSTASPASPEQTQSCPICLTNRKDVAFSCGHMTCGDCGSKISNCPICRVRITNRLKLY 400
BLAST of E3 ubiquitin-protein ligase MIB2 vs. TrEMBL
Match: A0A3M7P2D4 (Spectrin beta non-erythrocytic 1-like OS=Brachionus plicatilis OX=10195 GN=BpHYR1_003323 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.726e-9 Identity = 47/142 (33.10%), Postives = 69/142 (48.59%), Query Frame = 1 Query: 949 ETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDA----KAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1362 + E +D +D D KS + + Y + S +K+ G I +IVDS N D+ K EI E +L +A +C ICME + + FQCGH C+ CA + NCH+CR +ILSK +I++N Sbjct: 175 DAEDIDVDDPDEKSIVTYV----------STYYHIFSKMKNEAVDGKSI-------DKIVDS--NEDSLNFSKTEIGELIEKLKNL-----EEAQLCPICMEHKKDTTFQCGHTVCNICAKPLVNCHICREKILSKIKIYVN 292
BLAST of E3 ubiquitin-protein ligase MIB2 vs. TrEMBL
Match: A0A224XE36 (Putative e3 ubiquitin-protein ligase mib1 isoform x2 (Fragment) OS=Panstrongylus lignarius OX=156445 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.581e-9 Identity = 88/399 (22.06%), Postives = 170/399 (42.61%), Query Frame = 1 Query: 328 NKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQ----NQWFAYAEALIKLLPDNFLSSNITKNIFH--LCRNEHKLIQLLFDKSS--PELQQSILESLLYDAVNADENELFKHLVRT--EILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQ-----NYGRLISTVKSA----------------MRSGGDIYKIRSNGRRIVDSCTNMD-AKAEIEEFHGRLPTFLNPAGNDANI----CTICMEKRLNIRFQ-CGHL-CCSDCADQIFNCHMCRIEILSKERI-------FLN*SIMNF*PC 1389 N I + K+L+ ADV + +G A AA G+E ++ L++ +N + + P + + L+KL L + H + + ++ LL D ++ ++ +L + A+ + + ++ LV + ++ + G T L N F AK L+ + K ++++N Q+A+ LA+E ++ L++ E L+ D DG + + + + ++ Q + GRL+ + S SG D+ G+ +D C + + KA + + + L+P D ++ C +C + + FQ CGH+ CCS CA ++ C +CR +LS +I + N S++ F PC Sbjct: 368 NGHINVVKLLLKQNADVEIEDKDGDRAVHHAA-FGNEPAVIELLAKAGADLNIRNSRRQTPLHIAVNKGYIGVVKTLLKLGCHPSLQDSEGDTPLHDAITKKYDDMVTLLLDHNADIKVANKNGFNALHHAALRGNPSAMWMLLVMSPRRWVVDEPKDDGYTALHLAALNNHFSVAKLLIH--HGKADMDIQNHNLQTALHLAVERQHAQIVRLLVREGANLNITDKDGDTPMHEALRHHTLSQIKQLQGVKDIGRLLMGLGSQDEVHEAKSSAAIACFLAGSGADLTIKNKKGQTPLDLCPDPNLYKALTKAHNDKEIDQLDPRKGDVDLCLEECLVCSDHKRETLFQPCGHVACCSTCAPRVKRCLICRESVLSTAKIDECMVCSYKNASVL-FKPC 762
BLAST of E3 ubiquitin-protein ligase MIB2 vs. TrEMBL
Match: A0A0P4VNN6 (Putative e3 ubiquitin-protein ligase mib1 OS=Rhodnius neglectus OX=72488 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.333e-8 Identity = 88/399 (22.06%), Postives = 170/399 (42.61%), Query Frame = 1 Query: 328 NKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQ----NQWFAYAEALIKLLPDNFLSSNITKNIFH--LCRNEHKLIQLLFDKSS--PELQQSILESLLYDAVNADENELFKHLVRT--EILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQ-----NYGRLISTVKSA----------------MRSGGDIYKIRSNGRRIVDSCTNMD-AKAEIEEFHGRLPTFLNPAGNDANI----CTICMEKRLNIRFQ-CGHL-CCSDCADQIFNCHMCRIEILSKERI-------FLN*SIMNF*PC 1389 N I + K+L+ ADV + +G A AA G+E ++ L++ +N + + P + + L+KL L + H + + ++ LL D ++ ++ +L + A+ + + ++ LV + ++ + G T L N F AK L+ + K ++++N Q+A+ LA+E ++ L++ E L+ D DG + + + + ++ Q + GRL+ + S SG D+ G+ +D C + + KA + + + L+P D ++ C +C + + FQ CGH+ CCS CA ++ C +CR +LS +I + N S++ F PC Sbjct: 464 NGHINVVKLLLKQNADVEIEDKDGDRAVHHAA-FGNEPAVIELLAKAGADLNIRNSRRQTPLHIAVNKGYIGVVKTLLKLGCHPSLQDSEGDTPLHDAITKKYDDMVTLLLDHNADIKVANKNGFNALHHAALRGNPSAMWMLLVMSPRRWVVDEPKDDGYTALHLAALNNHFSVAKLLIH--HGKADMDIQNHNLQTALHLAVERQHAQIVRLLVREGANLNITDKDGDTPMHEALRHHTLSQIKQLQGVKDIGRLLMGLGSQDEVHEAKSSAAIACFLAGSGADLTIKNKKGQTPLDLCPDPNLYKALTKAHNDKEIDQLDPRKGDVDLCLEECLVCSDHKRETLFQPCGHVACCSTCAPRVKRCLICRESVLSTAKIDECMVCSYKNASVL-FKPC 858
BLAST of E3 ubiquitin-protein ligase MIB2 vs. TrEMBL
Match: A0A069DZQ0 (Putative e3 ubiquitin-protein ligase mib1 OS=Panstrongylus megistus OX=65343 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.348e-8 Identity = 88/399 (22.06%), Postives = 170/399 (42.61%), Query Frame = 1 Query: 328 NKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQ----NQWFAYAEALIKLLPDNFLSSNITKNIFH--LCRNEHKLIQLLFDKSS--PELQQSILESLLYDAVNADENELFKHLVRT--EILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQ-----NYGRLISTVKSA----------------MRSGGDIYKIRSNGRRIVDSCTNMD-AKAEIEEFHGRLPTFLNPAGNDANI----CTICMEKRLNIRFQ-CGHL-CCSDCADQIFNCHMCRIEILSKERI-------FLN*SIMNF*PC 1389 N I + K+L+ ADV + +G A AA G+E ++ L++ +N + + P + + L+KL L + H + + ++ LL D ++ ++ +L + A+ + + ++ LV + ++ + G T L N F AK L+ + K ++++N Q+A+ LA+E ++ L++ E L+ D DG + + + + ++ Q + GRL+ + S SG D+ G+ +D C + + KA + + + L+P D ++ C +C + + FQ CGH+ CCS CA ++ C +CR +LS +I + N S++ F PC Sbjct: 464 NGHINVVKLLLKQNADVEIEDKDGDRAVHHAA-FGNEPAVIELLAKAGADLNIRNSRRQTPLHIAVNKGYIGVVKTLLKLGCHPSLQDSEGDTPLHDAITKKYDDMVTLLLDHNADIKVANKNGFNALHHAALRGNPSAMWMLLVMSPRRWVVDEPKDDGYTALHLAALNNHFSVAKLLIH--HGKADMDIQNHNLQTALHLAVERQHAQIVRLLVREGANLNITDKDGDTPMHEALRHHTLSQIKQLQGVKDIGRLLMGLGSQDEVHEAKSSAAIACFLAGSGADLTIKNKKGQTPLDLCPDPNLYKALTKAHNDKEIDQLDPRKGDVDLCLEECLVCSDHKRETLFQPCGHVACCSTCAPRVKRCLICRESVLSTAKIDECMVCSYKNASVL-FKPC 858
BLAST of E3 ubiquitin-protein ligase MIB2 vs. TrEMBL
Match: A0A0V0G4N4 (Putative e3 ubiquitin-protein ligase mib1 OS=Triatoma dimidiata OX=72491 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.522e-8 Identity = 88/399 (22.06%), Postives = 170/399 (42.61%), Query Frame = 1 Query: 328 NKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQ----NQWFAYAEALIKLLPDNFLSSNITKNIFH--LCRNEHKLIQLLFDKSS--PELQQSILESLLYDAVNADENELFKHLVRT--EILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQ-----NYGRLISTVKSA----------------MRSGGDIYKIRSNGRRIVDSCTNMD-AKAEIEEFHGRLPTFLNPAGNDANI----CTICMEKRLNIRFQ-CGHL-CCSDCADQIFNCHMCRIEILSKERI-------FLN*SIMNF*PC 1389 N I + K+L+ ADV + +G A AA G+E ++ L++ +N + + P + + L+KL L + H + + ++ LL D ++ ++ +L + A+ + + ++ LV + ++ + G T L N F AK L+ + K ++++N Q+A+ LA+E ++ L++ E L+ D DG + + + + ++ Q + GRL+ + S SG D+ G+ +D C + + KA + + + L+P D ++ C +C + + FQ CGH+ CCS CA ++ C +CR +LS +I + N S++ F PC Sbjct: 464 NGHINVVKLLLKQNADVEIEDKDGDRAVHHAA-FGNEPAVIELLAKAGADLNIRNSRRQTPLHIAVNKGYIGVVKTLLKLGCHPSLQDSEGDTPLHDAITKKYDDMVTLLLDHNADIKVANKNGFNALHHAALRGNPSAMWMLLVMSPRRWVVDEPKDDGYTALHLAALNNHFSVAKLLIH--HGKADMDIQNHNLQTALHLAVERQHAQIVRLLVREGANLNITDKDGDTPMHEALRHHTLSQIKQLQGVKDIGRLLMGLGSQDEVHEAKSSAAIACFLAGSGADLTIKNKKGQTPLDLCPDPNLYKALTKAHNDKEIDQLDPRKGDVDLCLEECLVCSDHKRETLFQPCGHVACCSTCAPRVKRCLICRESVLSTAKIDECMVCSYKNASVL-FKPC 858
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Cavefish
Match: ENSAMXT00000048767.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Source:NCBI gene;Acc:103025232]) HSP 1 Score: 52.373 bits (124), Expect = 1.522e-6 Identity = 64/286 (22.38%), Postives = 124/286 (43.36%), Query Frame = 1 Query: 163 NNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEI-----LLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKF---VNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSAL 996 + + LH+AV+ KP + LL GA V G L L+ A V + ++ ++L+ SGA+V+A+ NG TA +AA G+ ++M AL L + S + P +++ + N LSS ++ LC + + S E + L + V+ DE ++ ++RT + + + GET L + + + +L ++ + +N ++ +S + LA E ++ +++ + +D D +G +AL Sbjct: 353 DGQTALHIAVQNCKPQVVQMLLGFGAQVQL---RGGKDLETPLHVAARV------KEGEKVAEMLLKSGAEVNAEQENGETAMHVAARYGALQMMRALTEEGADL-TWRSKVGETPLHVAVHHCHAHMVEAI-LNSLSSERSREEAELCVRQ--------ENQSGETALHLAAELKNETVHRDEEDVV--IIRTLMEYNADITAATRQMGETPLHYCARVGNAAVLQEMLDNVPSSRLQSAINKHSKNGRSPLLLAAERGHTAVVRVLLENSARVDVFDEEGIAAL 617
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Cavefish
Match: ENSAMXT00000016978.2 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Source:NCBI gene;Acc:103025232]) HSP 1 Score: 51.9878 bits (123), Expect = 1.854e-6 Identity = 64/286 (22.38%), Postives = 124/286 (43.36%), Query Frame = 1 Query: 163 NNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEI-----LLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKF---VNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSAL 996 + + LH+AV+ KP + LL GA V G L L+ A V + ++ ++L+ SGA+V+A+ NG TA +AA G+ ++M AL L + S + P +++ + N LSS ++ LC + + S E + L + V+ DE ++ ++RT + + + GET L + + + +L ++ + +N ++ +S + LA E ++ +++ + +D D +G +AL Sbjct: 353 DGQTALHIAVQNCKPQVVQMLLGFGAQVQL---RGGKDLETPLHVAARV------KEGEKVAEMLLKSGAEVNAEQENGETAMHVAARYGALQMMRALTEEGADL-TWRSKVGETPLHVAVHHCHAHMVEAI-LNSLSSERSREEAELCVRQ--------ENQSGETALHLAAELKNETVHRDEEDVV--IIRTLMEYNADITAATRQMGETPLHYCARVGNAAVLQEMLDNVPSSRLQSAINKHSKNGRSPLLLAAERGHTAVVRVLLENSARVDVFDEEGIAAL 617
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Cavefish
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:103034310]) HSP 1 Score: 50.447 bits (119), Expect = 4.965e-6 Identity = 94/406 (23.15%), Postives = 156/406 (38.42%), Query Frame = 1 Query: 397 GITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKN----IFHLCRNEH--KLIQLLFDKSSP-ELQQSILESLLYDAVNADENELFKHLVRTEILLPG-----QLETGETLLTFM-IKENKFL-------------------FAKNLLKSINKKKFV------------NLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSAL------AQLMEKLSICNNDQN--YGRLIST---------VKSAM-----RSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEF-----------------HGRLPTFLN---PAGNDANICTICMEKRLNIRFQ-CGH-LCCSDCADQIFNCHMCRIEILSKER 1350 G TA Q+AA+ G E++ L+ N I D F + +LL + N+ N H+ N+ ++++L + S+ LQ S ++ L+DA+ D F+ ++ ++P Q G LL +K NK F+ L ++N + V N++N RNQ+ +QLA+ L+ L++ E ++ ED +G +A+ QL LS + + Y RL S+ V +A+ + G DI G+ +D T+ I F H T N P+ + C IC E L + F C H + C +CA ++ C C++ I K R Sbjct: 466 GKTALQVAAHQGHMEVVKVLLQANSS-IEAKDEDGDAALHYTAFGNQAEIARLLLSKGANVNLLNNSMCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKD----FRSIIEILTVVPNIDFTQQNNRGFNLLHHAALKGNKLATEMILSRARQLADVKKEDGFSALHLAALNNHRDVAEILVKEGRCDANIRNNRNQTPLQLAVTQGHVALVALLVSEGADVNAEDEEGDTAMHTALSRQQLTNMLSTSEREASALYCRLSSSGLLGNTELNVGAAIACFLAQEGADINYANHKGKSPLDLVTDSTTLQLIRSFSEKHRYVVSSSSSLRRVHTTPNTMTNLAMPSAPGPSECLICSELALLVLFSPCQHSVACEECAHRMKKCIKCQVTITKKIR 866
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 52.373 bits (124), Expect = 1.238e-6 Identity = 95/427 (22.25%), Postives = 163/427 (38.17%), Query Frame = 1 Query: 397 GITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKN----IFHLCRNEH--KLIQLLFDKSSP-ELQQSILESLLYDAVNADENELFKHLVRTEILLPG-----QLETGETLLTFM-IKENKFLFAKNLLKS---INKKKF----------------------------VNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSA---------LAQLMEKLSI-----------CNNDQNYGRLIS---------TVKSAM-----RSGGDIYKIRSNGRRIVD--------------------------SCTNMDAKAEIEEFHGRLPTFLN---PAGNDANICTICMEKRLNIRF-QCGH-LCCSDCADQIFNCHMCRIEILSKER 1350 G TA Q+AA+ G E++ AL+ N + D F + +LL + N+ N H+ N+ ++++L + S+ LQ S ++ L+DA+ D F+ ++ +++P Q G LL +K NK K L ++ ++ KK +N++N RNQ+A+QLA+ +L+ L++ E ++ ED DG +A LA +M ++ C+ +GRL S +V +A+ + G DI G+ +D +C + A + H T N P + C IC E L + F C H + C +CA ++ C C++ I K R Sbjct: 457 GKTALQVAAHQGHMEVVKALLQANCS-VEVKDEDGDTALHYAAFGNQAEIARLLLSKGANVNLLNNSMCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKD----FRSIIEMLVVVPSIDFTQQNHRGFNLLHHAALKGNKLATEKILARARQLVDVKKDDGFSALHLAALNNHRDVAEVLVKEGRCDINVRNNRNQTALQLAVTQGHTELVQLLVDEGADVNMEDEDGDTAMHVALLRPQLANVMLSPAVGTGATEDNSEGCSPTTLHGRLSSSGLLGNGELSVGTAIACFLAQEGADINYANHKGKSPLDLLADSGALQLIKSFSEKHRLQRLQAITCGQGLSSASLRRVHTTPNTMTNLVLPTPPGPSECLICSELALLVLFCPCQHSVACEECAHRMKKCIKCQVTITKKIR 878
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 52.373 bits (124), Expect = 1.321e-6 Identity = 95/427 (22.25%), Postives = 163/427 (38.17%), Query Frame = 1 Query: 397 GITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKN----IFHLCRNEH--KLIQLLFDKSSP-ELQQSILESLLYDAVNADENELFKHLVRTEILLPG-----QLETGETLLTFM-IKENKFLFAKNLLKS---INKKKF----------------------------VNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSA---------LAQLMEKLSI-----------CNNDQNYGRLIS---------TVKSAM-----RSGGDIYKIRSNGRRIVD--------------------------SCTNMDAKAEIEEFHGRLPTFLN---PAGNDANICTICMEKRLNIRF-QCGH-LCCSDCADQIFNCHMCRIEILSKER 1350 G TA Q+AA+ G E++ AL+ N + D F + +LL + N+ N H+ N+ ++++L + S+ LQ S ++ L+DA+ D F+ ++ +++P Q G LL +K NK K L ++ ++ KK +N++N RNQ+A+QLA+ +L+ L++ E ++ ED DG +A LA +M ++ C+ +GRL S +V +A+ + G DI G+ +D +C + A + H T N P + C IC E L + F C H + C +CA ++ C C++ I K R Sbjct: 582 GKTALQVAAHQGHMEVVKALLQANCS-VEVKDEDGDTALHYAAFGNQAEIARLLLSKGANVNLLNNSMCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKD----FRSIIEMLVVVPSIDFTQQNHRGFNLLHHAALKGNKLATEKILARARQLVDVKKDDGFSALHLAALNNHRDVAEVLVKEGRCDINVRNNRNQTALQLAVTQGHTELVQLLVDEGADVNMEDEDGDTAMHVALLRPQLANVMLSPAVGTGATEDNSEGCSPTTLHGRLSSSGLLGNGELSVGTAIACFLAQEGADINYANHKGKSPLDLLADSGALQLIKSFSEKHRLQRLQAITCGQGLSSASLRRVHTTPNTMTNLVLPTPPGPSECLICSELALLVLFCPCQHSVACEECAHRMKKCIKCQVTITKKIR 1003
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 51.9878 bits (123), Expect = 1.730e-6 Identity = 95/428 (22.20%), Postives = 163/428 (38.08%), Query Frame = 1 Query: 394 NGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKN----IFHLCRNEH--KLIQLLFDKSSP-ELQQSILESLLYDAVNADENELFKHLVRTEILLPG-----QLETGETLLTFM-IKENKFLFAKNLLKS---INKKKF----------------------------VNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSA---------LAQLMEKLSI-----------CNNDQNYGRLIS---------TVKSAM-----RSGGDIYKIRSNGRRIVD--------------------------SCTNMDAKAEIEEFHGRLPTFLN---PAGNDANICTICMEKRLNIRF-QCGH-LCCSDCADQIFNCHMCRIEILSKER 1350 G TA Q+AA+ G E++ AL+ N + D F + +LL + N+ N H+ N+ ++++L + S+ LQ S ++ L+DA+ D F+ ++ +++P Q G LL +K NK K L ++ ++ KK +N++N RNQ+A+QLA+ +L+ L++ E ++ ED DG +A LA +M ++ C+ +GRL S +V +A+ + G DI G+ +D +C + A + H T N P + C IC E L + F C H + C +CA ++ C C++ I K R Sbjct: 581 QGKTALQVAAHQGHMEVVKALLQANCS-VEVKDEDGDTALHYAAFGNQAEIARLLLSKGANVNLLNNSMCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKD----FRSIIEMLVVVPSIDFTQQNHRGFNLLHHAALKGNKLATEKILARARQLVDVKKDDGFSALHLAALNNHRDVAEVLVKEGRCDINVRNNRNQTALQLAVTQGHTELVQLLVDEGADVNMEDEDGDTAMHVALLRPQLANVMLSPAVGTGATEDNSEGCSPTTLHGRLSSSGLLGNGELSVGTAIACFLAQEGADINYANHKGKSPLDLLADSGALQLIKSFSEKHRLQRLQAITCGQGLSSASLRRVHTTPNTMTNLVLPTPPGPSECLICSELALLVLFCPCQHSVACEECAHRMKKCIKCQVTITKKIR 1003
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 51.9878 bits (123), Expect = 1.830e-6 Identity = 95/427 (22.25%), Postives = 163/427 (38.17%), Query Frame = 1 Query: 397 GITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKN----IFHLCRNEH--KLIQLLFDKSSP-ELQQSILESLLYDAVNADENELFKHLVRTEILLPG-----QLETGETLLTFM-IKENKFLFAKNLLKS---INKKKF----------------------------VNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSA---------LAQLMEKLSI-----------CNNDQNYGRLIS---------TVKSAM-----RSGGDIYKIRSNGRRIVD--------------------------SCTNMDAKAEIEEFHGRLPTFLN---PAGNDANICTICMEKRLNIRF-QCGH-LCCSDCADQIFNCHMCRIEILSKER 1350 G TA Q+AA+ G E++ AL+ N + D F + +LL + N+ N H+ N+ ++++L + S+ LQ S ++ L+DA+ D F+ ++ +++P Q G LL +K NK K L ++ ++ KK +N++N RNQ+A+QLA+ +L+ L++ E ++ ED DG +A LA +M ++ C+ +GRL S +V +A+ + G DI G+ +D +C + A + H T N P + C IC E L + F C H + C +CA ++ C C++ I K R Sbjct: 526 GKTALQVAAHQGHMEVVKALLQANCS-VEVKDEDGDTALHYAAFGNQAEIARLLLSKGANVNLLNNSMCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKD----FRSIIEMLVVVPSIDFTQQNHRGFNLLHHAALKGNKLATEKILARARQLVDVKKDDGFSALHLAALNNHRDVAEVLVKEGRCDINVRNNRNQTALQLAVTQGHTELVQLLVDEGADVNMEDEDGDTAMHVALLRPQLANVMLSPAVGTGATEDNSEGCSPTTLHGRLSSSGLLGNGELSVGTAIACFLAQEGADINYANHKGKSPLDLLADSGALQLIKSFSEKHRLQRLQAITCGQGLSSASLRRVHTTPNTMTNLVLPTPPGPSECLICSELALLVLFCPCQHSVACEECAHRMKKCIKCQVTITKKIR 947
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Planmine SMEST
Match: SMESG000010218.1 (SMESG000010218.1) HSP 1 Score: 861.677 bits (2225), Expect = 0.000e+0 Identity = 420/448 (93.75%), Postives = 436/448 (97.32%), Query Frame = 1 Query: 19 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1362 AP+IPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRL+LRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSP+LEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDF+LPFQNQWFAYAEALIKLLPDNFLSSNIT+NIF+LCR EHKLIQLLFDKSSPELQQSILESLLYDAVNADENELF+HL++T+IL+P QLE GETLLTFMIKENK +FA NLL+SINK KFVNLKNR NQSAVQLAI ADQFDLIDLMIHETEGLDCED+ GKSALAQLMEKLSICNN+Q YG+LISTVK AMRSGGDIYKI SNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN Sbjct: 476 APTIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLNLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPMLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFQLPFQNQWFAYAEALIKLLPDNFLSSNITRNIFYLCRAEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFRHLIKTQILMPRQLEDGETLLTFMIKENKIVFATNLLQSINKMKFVNLKNRTNQSAVQLAIGADQFDLIDLMIHETEGLDCEDTVGKSALAQLMEKLSICNNEQKYGKLISTVKYAMRSGGDIYKITSNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 923
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Planmine SMEST
Match: SMESG000010549.1 (SMESG000010549.1) HSP 1 Score: 857.825 bits (2215), Expect = 0.000e+0 Identity = 421/448 (93.97%), Postives = 434/448 (96.88%), Query Frame = 1 Query: 19 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1362 AP+IPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGA VN +NNFGNSPLLEMLNDAQLVAN+NNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNIT+NIFHLCR EHKLIQL+FDKSS ELQQSILESLLYDAVNADENELF+HL++T+IL+P QLE GETLLTFMIKENK +FA NLLKS+NK KFVNLKNR NQSAVQLAIEADQFD IDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFH RLPT LNPAGNDANICTICM+K LNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN Sbjct: 565 APAIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAQVNTLNNFGNSPLLEMLNDAQLVANKNNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITRNIFHLCRAEHKLIQLIFDKSSRELQQSILESLLYDAVNADENELFRHLIKTQILMPRQLEDGETLLTFMIKENKIVFATNLLKSVNKMKFVNLKNRTNQSAVQLAIEADQFDPIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHDRLPTALNPAGNDANICTICMDKPLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1012
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Planmine SMEST
Match: SMESG000010549.1 (SMESG000010549.1) HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0 Identity = 421/448 (93.97%), Postives = 434/448 (96.88%), Query Frame = 1 Query: 19 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1362 AP+IPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGA VN +NNFGNSPLLEMLNDAQLVAN+NNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNIT+NIFHLCR EHKLIQL+FDKSS ELQQSILESLLYDAVNADENELF+HL++T+IL+P QLE GETLLTFMIKENK +FA NLLKS+NK KFVNLKNR NQSAVQLAIEADQFD IDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFH RLPT LNPAGNDANICTICM+K LNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN Sbjct: 597 APAIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAQVNTLNNFGNSPLLEMLNDAQLVANKNNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITRNIFHLCRAEHKLIQLIFDKSSRELQQSILESLLYDAVNADENELFRHLIKTQILMPRQLEDGETLLTFMIKENKIVFATNLLKSVNKMKFVNLKNRTNQSAVQLAIEADQFDPIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHDRLPTALNPAGNDANICTICMDKPLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1044
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Planmine SMEST
Match: SMESG000010222.1 (SMESG000010222.1) HSP 1 Score: 850.892 bits (2197), Expect = 0.000e+0 Identity = 416/448 (92.86%), Postives = 433/448 (96.65%), Query Frame = 1 Query: 19 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1362 AP+IPFAQSIISLTCTENALTLSMKFHGTLFPCF+DRLDLRSSN+HDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLV+NENNLNKSIEITKILIG GADVSAQLSNGITAF+LAANIGSEELMLALVSNNPKLINFISIDF+LPFQNQWFAYAEALIKLLPDNFLSSNIT+ IFHLCR EHKLIQLLFDKSS ELQQSILESLLY AVNADENELF+HL++T+IL+P QLE GETLLTFMIK+NK +FA NLLKS+NK KFVNLKNR NQSAVQLAIEADQ DLIDLMIHETEGLDCEDS GKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEI+EFHGRLPTFLNPAGNDANICTICM+K LNIRFQCGHLC SDCADQIFNCHMCRIEILSKERIFLN Sbjct: 148 APTIPFAQSIISLTCTENALTLSMKFHGTLFPCFLDRLDLRSSNLHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVSNENNLNKSIEITKILIGKGADVSAQLSNGITAFRLAANIGSEELMLALVSNNPKLINFISIDFQLPFQNQWFAYAEALIKLLPDNFLSSNITRKIFHLCRAEHKLIQLLFDKSSSELQQSILESLLYHAVNADENELFRHLIKTQILMPRQLEDGETLLTFMIKKNKIVFATNLLKSVNKMKFVNLKNRTNQSAVQLAIEADQLDLIDLMIHETEGLDCEDSVGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIKEFHGRLPTFLNPAGNDANICTICMDKPLNIRFQCGHLCSSDCADQIFNCHMCRIEILSKERIFLN 595
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Planmine SMEST
Match: SMESG000010579.1 (SMESG000010579.1) HSP 1 Score: 845.499 bits (2183), Expect = 0.000e+0 Identity = 415/448 (92.63%), Postives = 430/448 (95.98%), Query Frame = 1 Query: 19 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGAHVNNINNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGSGADVSAQLSNGITAFQLAANIGSEELMLALVSNNPKLINFISIDFKLPFQNQWFAYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLVRTEILLPGQLETGETLLTFMIKENKFLFAKNLLKSINKKKFVNLKNRRNQSAVQLAIEADQFDLIDLMIHETEGLDCEDSDGKSALAQLMEKLSICNNDQNYGRLISTVKSAMRSGGDIYKIRSNGRRIVDSCTNMDAKAEIEEFHGRLPTFLNPAGNDANICTICMEKRLNIRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 1362 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLK DICSSLLNAGAHVN +NNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIG+GAD++AQLSNGITAFQLAANIGSEELML LVSNNPKLINFISIDFKLPFQNQWF+YAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHL++ +IL+P LE GETLLTFMIKENK +FA NLLKS+NK KFVNLKNR NQSAVQLAIEADQFDLIDLMIHE+EGLDCEDSDGKSALAQLMEKLSI NNDQNYG+LISTVKSAMRSGGDIYKI +NGRRIVD CTNMDAKAEIEEFHGRLPT LN AGNDANICTICM+K LN RFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN Sbjct: 528 APSIPFAQSIISLTCTENALTLSMKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKQDICSSLLNAGAHVNTLNNFGNSPLLEMLNDAQLVANENNLNKSIEITKILIGNGADINAQLSNGITAFQLAANIGSEELMLTLVSNNPKLINFISIDFKLPFQNQWFSYAEALIKLLPDNFLSSNITKNIFHLCRNEHKLIQLLFDKSSPELQQSILESLLYDAVNADENELFKHLIKKQILMPRTLEDGETLLTFMIKENKIVFATNLLKSVNKMKFVNLKNRTNQSAVQLAIEADQFDLIDLMIHESEGLDCEDSDGKSALAQLMEKLSILNNDQNYGKLISTVKSAMRSGGDIYKITTNGRRIVDLCTNMDAKAEIEEFHGRLPTALNTAGNDANICTICMDKPLNTRFQCGHLCCSDCADQIFNCHMCRIEILSKERIFLN 975 The following BLAST results are available for this feature:
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 2
BLAST of E3 ubiquitin-protein ligase MIB2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 3
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of E3 ubiquitin-protein ligase MIB2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30011798 ID=SMED30011798|Name=E3 ubiquitin-protein ligase MIB2|organism=Schmidtea mediterranea sexual|type=transcript|length=1721bpback to top protein sequence of SMED30011798-orf-1 >SMED30011798-orf-1 ID=SMED30011798-orf-1|Name=SMED30011798-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=426bp MKFHGTLFPCFVDRLDLRSSNVHDGNNNSLLHLAVKCLKPDICSSLLNAGback to top Annotated Terms
The following terms have been associated with this transcript:
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