UPF0602 protein C4orf47-like

Overview
NameUPF0602 protein C4orf47-like
Smed IDSMED30011676
Length (bp)1004
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of UPF0602 protein C4orf47-like (SMED30011676) t-SNE clustered cells

Violin plots show distribution of expression levels for UPF0602 protein C4orf47-like (SMED30011676) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of UPF0602 protein C4orf47-like (SMED30011676) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for UPF0602 protein C4orf47-like (SMED30011676) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30011676

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30011676h1SMcG0001926 dd_Smed_v4_12022_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30011676h1SMcG0001926 dd_Smed_v4_12022_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30011676h1SMcG0001926 dd_Smed_v4_12022_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30011676h1SMcG0001926 dd_Smed_v4_12022_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30011676h1SMcG0001926 dd_Smed_v6_12022_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017
whole organism asexual adult RNA-sequencing evidence
epidermisSMED30011676h1SMcG0001926 dd_Smed_v6_12022_0_1dd_Smed_v6PMID:30399335
Ross et al., 2018
whole organism asexual adult colorimetric in situ hybridization evidence
neuronSMED30011676h1SMcG0001926 dd_Smed_v6_12022_0_1dd_Smed_v6PMID:30399335
Ross et al., 2018
whole organism asexual adult colorimetric in situ hybridization evidence
epidermisSMED30011676h1SMcG0001926 dd_Smed_v4_12022_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Human
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346])

HSP 1 Score: 127.102 bits (318), Expect = 1.327e-33
Identity = 101/315 (32.06%), Postives = 152/315 (48.25%), Query Frame = 1
Query:   58 LMASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFS-NFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQ-------NKPFH-TVKSLDFFDSNPYKGSIFSEGKEKPVKENLKSFHVNTS------------HLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGT 933
            + A   K D+E+ GLF E  Y +  D Y +  N  FN +++K KQ++   +K  S L  GYF  +F+R FEGE Y +  ++RR    +   K  GK F   +  K P GLGSYYGT  GP+P    ++    K  +   +N YTN  KKGTGYGY  +T  K   + ++ Y   K   +K N+         PF   +   D+FD+NPY    FSE    P+K+  K   ++ +              + +F+ +P +  D Y  KL        N+     + F    GPK+    SI+  N+ R++N++NY T
Sbjct:    1 MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKY-KAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKANEEHHRLLKGAPFKLNLHPRDYFDANPY----FSEESLPPIKKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSADPYVAKL-------ANISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKNYKT 303          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Human
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346])

HSP 1 Score: 98.2117 bits (243), Expect = 3.432e-24
Identity = 64/162 (39.51%), Postives = 88/162 (54.32%), Query Frame = 1
Query:   58 LMASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFS-NFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNK 534
            + A   K D+E+ GLF E  Y +  D Y +  N  FN +++K KQ++   +K  S L  GYF  +F+R FEGE Y +  ++RR    +   K  GK F   +  K P GLGSYYGT  GP+P    ++    K  +   +N YTN  KKGTGYGY  +T  K
Sbjct:    1 MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKY-KAPGKNLYTNPGKKGTGYGYANITIGK 161          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Human
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346])

HSP 1 Score: 98.2117 bits (243), Expect = 5.310e-24
Identity = 64/162 (39.51%), Postives = 88/162 (54.32%), Query Frame = 1
Query:   58 LMASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFS-NFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNK 534
            + A   K D+E+ GLF E  Y +  D Y +  N  FN +++K KQ++   +K  S L  GYF  +F+R FEGE Y +  ++RR    +   K  GK F   +  K P GLGSYYGT  GP+P    ++    K  +   +N YTN  KKGTGYGY  +T  K
Sbjct:    1 MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKY-KAPGKNLYTNPGKKGTGYGYANITIGK 161          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Zebrafish
Match: C14H4orf47 (zgc:153146 [Source:NCBI gene;Acc:751702])

HSP 1 Score: 144.436 bits (363), Expect = 2.687e-40
Identity = 109/325 (33.54%), Postives = 161/325 (49.54%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSL-------------DFFDSNPYKGSIFSEGKEKPVK-ENLKSFHV----------NTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL 954
            M  D K+D+E+ G+F+E  Y S  D Y +     FN S+ K KQ+++   K+K  L  GYF + F R FE EA++DP++I R+       K  GK F   +  K   G+G+YYGTF GPI AM    I   K ++   +NFYTN  KKG+GYGY  +T +K   Y S+PY        KE   +     KS+             ++FD NPYK   F +    P K E  K F V               + +F+++P Y  + Y  K  +++     V N+  + F   PGPK+    SI++ N+ +++N+ NY  + SV S 
Sbjct:    1 MPPDGKSDMERIGVFKEMGYTSIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIP-RKQNKSAGKNFYTNPPKKGSGYGYPDITLSKMVSYSSDPY-----DRAKEMLKREITAHKSMLKGGAFRLNLHPNEYFDGNPYK---FDKPLPPPKKIEEKKHFAVPFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKNKSV-----VANNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Zebrafish
Match: C14H4orf47 (zgc:153146 [Source:NCBI gene;Acc:751702])

HSP 1 Score: 144.436 bits (363), Expect = 2.687e-40
Identity = 109/325 (33.54%), Postives = 161/325 (49.54%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSL-------------DFFDSNPYKGSIFSEGKEKPVK-ENLKSFHV----------NTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL 954
            M  D K+D+E+ G+F+E  Y S  D Y +     FN S+ K KQ+++   K+K  L  GYF + F R FE EA++DP++I R+       K  GK F   +  K   G+G+YYGTF GPI AM    I   K ++   +NFYTN  KKG+GYGY  +T +K   Y S+PY        KE   +     KS+             ++FD NPYK   F +    P K E  K F V               + +F+++P Y  + Y  K  +++     V N+  + F   PGPK+    SI++ N+ +++N+ NY  + SV S 
Sbjct:    1 MPPDGKSDMERIGVFKEMGYTSIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIP-RKQNKSAGKNFYTNPPKKGSGYGYPDITLSKMVSYSSDPY-----DRAKEMLKREITAHKSMLKGGAFRLNLHPNEYFDGNPYK---FDKPLPPPKKIEEKKHFAVPFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKNKSV-----VANNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Zebrafish
Match: zgc:153146 (zgc:153146 [Source:NCBI gene;Acc:751702])

HSP 1 Score: 144.05 bits (362), Expect = 3.460e-40
Identity = 109/325 (33.54%), Postives = 161/325 (49.54%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSL-------------DFFDSNPYKGSIFSEGKEKPVK-ENLKSFHV----------NTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL 954
            M  D K+D+E+ G+F+E  Y S  D Y +     FN S+ K KQ+++   K+K  L  GYF + F R FE EA++DP++I R+       K  GK F   +  K   G+G+YYGTF GPI AM    I   K ++   +NFYTN  KKG+GYGY  +T +K   Y S+PY        KE   +     KS+             ++FD NPYK   F +    P K E  K F V               + +F+++P Y  + Y  K  +++     V N+  + F   PGPK+    SI++ N+ +++N+ NY  + SV S 
Sbjct:    1 MPPDGKSDMERIGVFKEMGYISIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIP-RKQNKSAGKNFYTNPPKKGSGYGYPDITLSKMVSYSSDPY-----DRAKEMLKREITAHKSMLKGGAFRLNLHPNEYFDGNPYK---FDKPLPPPKKIEEKKHFAVPFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKTKSV-----VANNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Xenopus
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:NCBI gene;Acc:100379819])

HSP 1 Score: 139.428 bits (350), Expect = 3.493e-38
Identity = 111/307 (36.16%), Postives = 154/307 (50.16%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNK-------PFH-TVKSLDFFDSNPYKGS-------IFSEGK--EKPVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTV 936
            + D+E+ GLF E  Y S  D Y  PG+  FN S++K +QI+   +K+ + +  GYF + F R FEGE+YSD +K RR+   Q   K  GK F   S  K P GLGS+YGT  GP+ A   E ++  K+     +NFYTN  K+G+GYGY  +T  K   Y SE Y I     +KE +N        PF   +   D F+ NPY          + S+ K  EKP K +           + +F+ +P + ND Y  K  +    IK      ++ F    GPKT    SIL  N+ +S+ A NY TV
Sbjct:    5 RTDMERIGLFSEMGYTSIGDKYAPPGSKPFNESASKNRQILPGGSKSMANILGGYFDAQFKRVFEGESYSDVLKQRRQYRMQQSKKNLGKPFLPSSGEKKPSGLGSFYGTVGGPVVAFSAE-LKPRKAYTAPGKNFYTNPPKQGSGYGYTSVTIGKPYLYSSENYDIATELIKKEIENHKSKLKGGPFKLNLHPKDHFNPNPYYTDKPLPPLKVHSQKKETEKPFKPSSPGKQAG-GMKAGTFDTYPTHSNDPYTIKSAKTP--IKE-----RKIFHPPGGPKTYPVHSILTSNVIKSVTAVNYKTV 302          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Mouse
Match: 1700029J07Rik (RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729])

HSP 1 Score: 137.502 bits (345), Expect = 1.269e-37
Identity = 103/313 (32.91%), Postives = 153/313 (48.88%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQ-------NKPFHT-VKSLDFFDSNPYKGSIFSEGKEKPVKE------NLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSV 945
            K D+E+ GLF E  Y +  D Y +P N  FN +++K +QI+    K  S+L  GYF S F R FEGE Y +  ++RR        K  GK F   S  K P GLGSYYGT  GP+P      I+     +   +N YTN  KKGTGYGY  +T  K   + S+ Y   + S +KE++         PF   +   D+FD+NPY    F E    P++       + K F  ++         + +F+ +P +  D Y  K+++ +P      +  +R F    GPK+    SI+  N++R++N +NY    S 
Sbjct:    7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKPSGLGSYYGTIGGPVP-FFSAQIKPKDKYQPPGKNLYTNPGKKGTGYGYANVTIGKQLSHSSDLYDAARQSYKKESEEHHRLIKGSPFKLHLHPKDYFDTNPY----FLEHHLPPLRREEKKEVSFKPFKPSSPGKKAGGMKAGAFDPYPAHSADPYVVKVEKAIP------SKGERVFHPPNGPKSRPVESIMALNVKRALNVKNYKNASST 308          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Mouse
Match: 1700029J07Rik (RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729])

HSP 1 Score: 137.502 bits (345), Expect = 1.269e-37
Identity = 103/313 (32.91%), Postives = 153/313 (48.88%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQ-------NKPFHT-VKSLDFFDSNPYKGSIFSEGKEKPVKE------NLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSV 945
            K D+E+ GLF E  Y +  D Y +P N  FN +++K +QI+    K  S+L  GYF S F R FEGE Y +  ++RR        K  GK F   S  K P GLGSYYGT  GP+P      I+     +   +N YTN  KKGTGYGY  +T  K   + S+ Y   + S +KE++         PF   +   D+FD+NPY    F E    P++       + K F  ++         + +F+ +P +  D Y  K+++ +P      +  +R F    GPK+    SI+  N++R++N +NY    S 
Sbjct:    7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKPSGLGSYYGTIGGPVP-FFSAQIKPKDKYQPPGKNLYTNPGKKGTGYGYANVTIGKQLSHSSDLYDAARQSYKKESEEHHRLIKGSPFKLHLHPKDYFDTNPY----FLEHHLPPLRREEKKEVSFKPFKPSSPGKKAGGMKAGAFDPYPAHSADPYVVKVEKAIP------SKGERVFHPPNGPKSRPVESIMALNVKRALNVKNYKNASST 308          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Mouse
Match: 1700029J07Rik (RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729])

HSP 1 Score: 61.2326 bits (147), Expect = 2.400e-11
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNP 369
            K D+E+ GLF E  Y +  D Y +P N  FN +++K +QI+    K  S+L  GYF S F R FEGE Y +  ++RR        K  GK F   S  K P
Sbjct:    7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKP 107          
BLAST of UPF0602 protein C4orf47-like vs. UniProt/SwissProt
Match: sp|Q0P4C5|CD047_DANRE (UPF0602 protein C4orf47 homolog OS=Danio rerio OX=7955 GN=zgc:153146 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.265e-37
Identity = 107/325 (32.92%), Postives = 160/325 (49.23%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSL-------------DFFDSNPYKGSIFSEGKEKPVK-ENLKSFHV----------NTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL 954
            M  D K+D+E+ G+F+E  Y S  D Y +     FN S+ K KQ+++   K+K  L  GYF + F R FE EA++DP++I R+       K  GK F   +  K   G+G+YYGTF GPI AM    I   K ++   +NFYTN  K+G+GYG   +T +K   Y S+PY        KE   +     KS+             ++FD NPYK   F +    P K E  K F V               + +F+++P Y  + Y  K  +++     V N+  + F   PGPK+    SI++ N+ +++N+ NY  + SV S 
Sbjct:    1 MPPDGKSDMERIGVFKEMGYISIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIP-RKQNKSAGKNFYTNPPKEGSGYGCPDITLSKMVSYSSDPY-----DRAKEMLKREITAHKSMLKGGAFRLNLHPNEYFDGNPYK---FDKPLPPPKKIEEKKHFAVPFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKTKSV-----VANNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311          
BLAST of UPF0602 protein C4orf47-like vs. UniProt/SwissProt
Match: sp|Q3U1D9|CD047_MOUSE (UPF0602 protein C4orf47 homolog OS=Mus musculus OX=10090 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.877e-37
Identity = 103/313 (32.91%), Postives = 153/313 (48.88%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQ-------NKPFHT-VKSLDFFDSNPYKGSIFSEGKEKPVKE------NLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSV 945
            K D+E+ GLF E  Y +  D Y +P N  FN +++K +QI+    K  S+L  GYF S F R FEGE Y +  ++RR        K  GK F   S  K P GLGSYYGT  GP+P      I+     +   +N YTN  KKGTGYGY  +T  K   + S+ Y   + S +KE++         PF   +   D+FD+NPY    F E    P++       + K F  ++         + +F+ +P +  D Y  K+++ +P      +  +R F    GPK+    SI+  N++R++N +NY    S 
Sbjct:    7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKPSGLGSYYGTIGGPVP-FFSAQIKPKDKYQPPGKNLYTNPGKKGTGYGYANVTIGKQLSHSSDLYDAARQSYKKESEEHHRLIKGSPFKLHLHPKDYFDTNPY----FLEHHLPPLRREEKKEVSFKPFKPSSPGKKAGGMKAGAFDPYPAHSADPYVVKVEKAIP------SKGERVFHPPNGPKSRPVESIMALNVKRALNVKNYKNASST 308          
BLAST of UPF0602 protein C4orf47-like vs. UniProt/SwissProt
Match: sp|Q5XHC1|CD047_XENLA (UPF0602 protein C4orf47 homolog OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.393e-36
Identity = 108/310 (34.84%), Postives = 151/310 (48.71%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVK-----------SLDFFDSNPYKGS-------IFSEGK--EKPVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTV 936
            K D+E+ GLF E  Y S  D Y  PG+  FN S++K +Q++   +K+ + +  GYF   F R FEGE+YSDP K RR+   Q   K  GK F   S  K   GLGS+YGT  GP+ A   E ++  K+     +NFYTN  K G+GYGY  +T  K   Y SE Y I +   +KE ++   H  K             D+F+ NPY          + S+ K  EKP K +  +        + +F+ +P + ND Y  K  +            ++ F    GPKT    SIL  N+ +S+ A NY TV
Sbjct:    5 KTDMERIGLFSEMGYTSIGDKYAAPGSKPFNESASKNRQMLPGGSKSMANMLGGYFDGQFKRVFEGESYSDPFKQRRQHRMQQSKKNLGKPFLPSSGEKKRSGLGSFYGTLGGPVVAFSAE-LKSRKAYTAPGKNFYTNPPKDGSGYGYPSVTIGKPYPYSSENYDISRELIKKEIEH---HKSKLKGGAFKLNLHPKDYFEPNPYYTDKTLPPLKVHSQKKETEKPFKPSSPAKEAG-GMKAGTFDPYPTHSNDPYTAKPSK-------TPVKERKVFHPPGGPKTYPVHSILTSNVIKSVTALNYKTV 302          
BLAST of UPF0602 protein C4orf47-like vs. UniProt/SwissProt
Match: sp|Q2T9M0|CD047_BOVIN (UPF0602 protein C4orf47 homolog OS=Bos taurus OX=9913 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.866e-34
Identity = 104/319 (32.60%), Postives = 154/319 (48.28%), Query Frame = 1
Query:   58 LMASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFS-NFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFH-----------TVKSLDFFDSNPYKGSIFSEGKEKPVKENLKSFHVNT------------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTV 936
            + A   K D+E+ GLF E  Y +  D Y +  N  FN S++K +QI+   +K  S L  GYF  +F+R FEGE+Y +P ++RR    +   K   K F   +  K P GLGSYYGT  GP+P    ++    K  E   +N YTN  KKGTGYGY  +T  K   + S+ Y   K + +KEN+    H            + + ++FD+NPY     SE    P+K+  K   V                 + +F+ +P +  D Y  KL       K+  + S + F    GPK+    SI+  N++R++N +NY T 
Sbjct:    1 MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNESASKNRQILPGGSKEMSNLQAGYFDPHFVRIFEGESYVNPNQVRRRYMMEEAKKNLSKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPKEKY-EPPGKNLYTNPGKKGTGYGYANITIGKQFSHSSDLYDAAKLNNKKENEE---HRRLLKGTAFKLNLYTREYFDTNPY----MSEKPLPPIKKVEKKETVGNPFKPSSPGKKAGGMKAGTFDPYPSHSADPYVVKL-------KSPSSKSAKVFHPPGGPKSRPIESIMALNVKRALNMKNYKTA 304          
BLAST of UPF0602 protein C4orf47-like vs. UniProt/SwissProt
Match: sp|A7E2U8|CD047_HUMAN (UPF0602 protein C4orf47 OS=Homo sapiens OX=9606 GN=C4orf47 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.371e-33
Identity = 101/315 (32.06%), Postives = 152/315 (48.25%), Query Frame = 1
Query:   58 LMASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFS-NFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQ-------NKPFH-TVKSLDFFDSNPYKGSIFSEGKEKPVKENLKSFHVNTS------------HLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGT 933
            + A   K D+E+ GLF E  Y +  D Y +  N  FN +++K KQ++   +K  S L  GYF  +F+R FEGE Y +  ++RR    +   K  GK F   +  K P GLGSYYGT  GP+P    ++    K  +   +N YTN  KKGTGYGY  +T  K   + ++ Y   K   +K N+         PF   +   D+FD+NPY    FSE    P+K+  K   ++ +              + +F+ +P +  D Y  KL        N+     + F    GPK+    SI+  N+ R++N++NY T
Sbjct:    1 MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKY-KAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKANEEHHRLLKGAPFKLNLHPRDYFDANPY----FSEESLPPIKKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSADPYVAKL-------ANISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKNYKT 303          
BLAST of UPF0602 protein C4orf47-like vs. TrEMBL
Match: A0A267FK75 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig016035g1 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.531e-55
Identity = 119/309 (38.51%), Postives = 175/309 (56.63%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFH---------TVKSLDFFDSNPYKGS---IFSEGKEKPVKENLKSFHV---NTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFS 951
            K+D+++ G+F+E  Y +  D YK PGNF+FN S+ KG+Q++    K KS L+ GY S F R FEGE YSDPIK RR+  ++   +   + ++  S PK   G GS+YGTFSGP+      +    K+   + +N  TN  KKGTGYGY  +T NKYP+YKS+ Y   K  +++EN+              +    DFFD+NPYKG      SE K +P+    K  +    +    + +F++FP Y ++ Y    K++L     V+N S +TF    GPKT    S+L++N+ RS+N+ NY +V SV S
Sbjct:    4 KSDMDRIGIFKEMSYHTVGDPYKNPGNFQFNTSAYKGRQMLPGGTKKKSGLSQGYMSEFGRVFEGEGYSDPIKTRRQERQKASSRNLSRSWNPTSFPKVGSGTGSHYGTFSGPVQYFNAFSSSKGKA-APEGKNILTNPPKKGTGYGYAFVTLNKYPDYKSDTYEKYKDIQKRENEQHKQKVAGKGAFKLSTHPADFFDANPYKGGSALTKSEAKAEPIARPFKPSNPGKKDGGMKAGTFDSFPTYSSEKYQ---KKSLTRPVQVVNSSGKTFVPNSGPKTTLQTSVLHQNVTRSVNSSNYKSVQSVMS 308          
BLAST of UPF0602 protein C4orf47-like vs. TrEMBL
Match: A0A1S3HMA8 (UPF0602 protein C4orf47 homolog isoform X1 OS=Lingula unguis OX=7574 GN=LOC106156065 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.013e-49
Identity = 117/313 (37.38%), Postives = 170/313 (54.31%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQ-------NKPFH-TVKSLDFFDSNPYKGSIFSEGKEKPVKE------NLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSV 945
            K D+E+ G+FQE  Y +  D Y+ PG  +FN S++KGKQ++   +K +SAL HGYF   F R FE EAY+DPIKIRR+   +   K  GK F   S  K P GLG++YGTF+GP+ A      +  +  +   RNF TN +KKGTGYGY+ +T +KYPEYK   Y   K   ++EN+          F   +    +FD NP+     S+    P K+      ++K F  +          + +F+ +P +  D Y  K KR +    +V+N + + F    GPKT    SIL++N+ + +N+ NY TV SV
Sbjct:    7 KTDMERIGVFQEMSYATIGDRYRRPGEIQFNVSASKGKQMLPGGSKERSALQHGYFHEKFNRVFESEAYTDPIKIRRQRRVKEMQKNIGKQFIPSSGEKMPSGLGNHYGTFAGPVSA-FSPVAKARQGYKAPGRNFTTNPAKKGTGYGYLSVTISKYPEYKGNEYDKTKEISKRENEAHRKALKGGAFRLNMHPKAYFDGNPF----MSDRPLPPAKKGVSKPPDVKPFRPSNPPKKAGGSKAGTFDPYPSHSQDPYGIKYKRPV----HVVNKTGKIFVPSTGPKTAPISSILDQNVTKVVNSMNYRTVRSV 310          
BLAST of UPF0602 protein C4orf47-like vs. TrEMBL
Match: S4R9V4 (Zgc:153146 OS=Petromyzon marinus OX=7757 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.046e-48
Identity = 115/300 (38.33%), Postives = 149/300 (49.67%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSN-FLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSD-EIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQN-------KPFHT-VKSLDFFDSNPYKGSIFSEGKEKP--VKENLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNI 900
            M SD K D+E+ GLF E  Y S  D YK+  N  FNA++ +G+Q++ E  K++SAL  GYFS  F R  +GEAYSDPIKIRR+   Q   K  GK     S PK P GLGSYYGT  GPIPA+     Q  K       RNF TN  KKGTGYGY  +     P Y  +PY   K    KE +         PF   +  LD FD NPY+    +     P   K + K+F  ++         + +F+++P +  D Y  K    L    +        F   PGPK+    SI++ NI
Sbjct:    1 MPSDGKTDMERVGLFSELGYISIGDKYKSSFNKAFNAAANRGRQMLTEGPKSRSALPAGYFSQGFTRVMQGEAYSDPIKIRRQRRLQEAKKNLGKALLPSSCPKKPSGLGSYYGTLGGPIPAL--SPAQLPKKPYSAPGRNFVTNPPKKGTGYGYPQVMIGSLPPYMPDPYDRAKEIRRKEMETHKKMVKGAPFRLNLHPLDIFDVNPYRSDQPARATHPPRATKSSEKAFKPSSPAKKMGGMKAGTFDSYPSHSEDAYIVKRASALAGGSSGNKGGGHVFRPSPGPKSTPVRSIIDANI 298          
BLAST of UPF0602 protein C4orf47-like vs. TrEMBL
Match: A0A210QGT9 (UPF0602 protein C4orf47-like OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT05429 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.151e-48
Identity = 119/315 (37.78%), Postives = 175/315 (55.56%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSLDF---------FDSNPYKGSIF------SEGKEKPVKENLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVF 948
            KND+++ G+FQE  Y +  D YK PG  +FNA+++KGKQI+   +KT+SAL  GYF   + R  EGEAYSDPIK+RR+   +   +  GK F   S  K P GLGS+YGT +GPI A      +  K  +   +NF TN  KKGTG+G+V +T   YP+Y+++ Y   +   +KE  N   + VK   F         FD NPY           S G  K  KE++K F  ++         + +F+ +P +  D Y  K+  ++    NV+N + +TF    GPK++ T SI+N+NI ++IN QNY ++ S+ 
Sbjct:    7 KNDMDRIGVFQEMGYVTIGDRYKPPG-IQFNAAASKGKQILPGGSKTRSALQSGYFLEKYGRVMEGEAYSDPIKMRRQHRLKESQRNIGKAFLPSSGEKKPSGLGSHYGTLAGPISA-FSPNARPGKGYKSPGKNFLTNPGKKGTGFGFVEITLGSYPKYQADAYERARELTKKELANHK-NAVKGAAFKLNMHPKPYFDQNPYASDKLLGRRSVSAGVSK--KEDVKPFKPSSPGKKPAGMKAGTFDPYPSHSADPYKIKVSHSV----NVVNKTGKTFMPSQGPKSVPTNSIVNQNILKTINVQNYRSMTSII 312          
BLAST of UPF0602 protein C4orf47-like vs. TrEMBL
Match: A0A1S3HKS1 (UPF0602 protein C4orf47 homolog isoform X2 OS=Lingula unguis OX=7574 GN=LOC106156065 PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 8.700e-48
Identity = 114/313 (36.42%), Postives = 167/313 (53.35%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPY--GILKSSEEKENQNKPFH------TVKSLDFFDSNPYKGSIFSEGKEKPVKE------NLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSV 945
            K D+E+ G+FQE  Y +  D Y+ PG  +FN S++KGKQ++   +K +SAL HGYF   F R FE EAY+DPIKIRR+   +   K  GK F   S  K P GLG++YGTF+GP+ A      +  +  +   RNF TN +KKGTGYG++ +T   YP+Y +E Y  G +    E E   K          +    +FD NP+     S+    P K+      ++K F  +          + +F+ +P +  D Y  K KR +    +V+N + + F    GPKT    SIL++N+ + +N+ NY TV SV
Sbjct:    7 KTDMERIGVFQEMSYATIGDRYRRPGEIQFNVSASKGKQMLPGGSKERSALQHGYFHEKFNRVFESEAYTDPIKIRRQRRVKEMQKNIGKQFIPSSGEKMPSGLGNHYGTFAGPVSA-FSPVAKARQGYKAPGRNFTTNPAKKGTGYGFISVTIGDYPKYSTEQYEKGKILQKRENEAHRKALKGGAFRLNMHPKAYFDGNPF----MSDRPLPPAKKGVSKPPDVKPFRPSNPPKKAGGSKAGTFDPYPSHSQDPYGIKYKRPV----HVVNKTGKIFVPSTGPKTAPISSILDQNVTKVVNSMNYRTVRSV 310          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Cavefish
Match: zgc:153146 (chromosome 24 C4orf47 homolog [Source:NCBI gene;Acc:103030756])

HSP 1 Score: 120.939 bits (302), Expect = 1.854e-31
Identity = 105/322 (32.61%), Postives = 161/322 (50.00%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFE-FNASSAKGKQIVIESNKTKSALNHGYF-SNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSD-EIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKE-------NQNKPFHT-VKSLDFFDSNPYK------GSIFSEGKEK----PVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNV--MNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFS 951
            M  + K+D+E+ GLF+E  Y S  D Y TP  +  FN S+ K KQ+++  +K KS L  GYF + F R FE EA +D IKI+R+   +   +  GK F   S  K   G+GSYYGT  G I AM    ++  K   +   +N YT+  KKG+GYGY G+T  K   Y S+PY   K   ++E        +  PF   +   + FD+NPYK       S  +E K+     P K +  S  +     + +F+ +P +  D Y       +P+      +N   + F   PGPK+    SI++ N+ + +N++N   + S+ +
Sbjct:    1 MPPEGKSDMERVGLFKEMGYISIGDKY-TPFLYRAFNESAHKNKQMLVGGSKKKSGLQTGYFDAQFKRIFEKEALTDLIKIQRQYKLEQTKRNLGKAFLPSSGEKKRSGIGSYYGTLGGSIQAM--SPLKIPKQPYKSPGKNMYTSPPKKGSGYGYPGVTLGKLDLYSSDPYDRAKDIVKRELIAHKSMLKGGPFRLNLHPKECFDANPYKPDKPLPPSKKTEDKKTHFGVPFKPSSPSKKIGGMK-AGTFDLYPTHSVDPY-------IPHKPKTAGLNKELKIFHPSPGPKSTPVKSIISLNVNKFVNSKNCNQIPSIMA 311          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Sea Lamprey
Match: zgc:153146 (pep scaffold:Pmarinus_7.0:GL477013:54605:76454:-1 gene:ENSPMAG00000001809.1 transcript:ENSPMAT00000001995.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zgc:153146)

HSP 1 Score: 175.252 bits (443), Expect = 8.034e-53
Identity = 115/300 (38.33%), Postives = 149/300 (49.67%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSN-FLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSD-EIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQN-------KPFHT-VKSLDFFDSNPYKGSIFSEGKEKP--VKENLKSFHVNT------SHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNI 900
            M SD K D+E+ GLF E  Y S  D YK+  N  FNA++ +G+Q++ E  K++SAL  GYFS  F R  +GEAYSDPIKIRR+   Q   K  GK     S PK P GLGSYYGT  GPIPA+     Q  K       RNF TN  KKGTGYGY  +     P Y  +PY   K    KE +         PF   +  LD FD NPY+    +     P   K + K+F  ++         + +F+++P +  D Y  K    L    +        F   PGPK+    SI++ NI
Sbjct:    1 MPSDGKTDMERVGLFSELGYISIGDKYKSSFNKAFNAAANRGRQMLTEGPKSRSALPAGYFSQGFTRVMQGEAYSDPIKIRRQRRLQEAKKNLGKALLPSSCPKKPSGLGSYYGTLGGPIPAL--SPAQLPKKPYSAPGRNFVTNPPKKGTGYGYPQVMIGSLPPYMPDPYDRAKEIRRKEMETHKKMVKGAPFRLNLHPLDIFDVNPYRSDQPARATHPPRATKSSEKAFKPSSPAKKMGGMKAGTFDSYPSHSEDAYIVKRASALAGGSSGNKGGGHVFRPSPGPKSTPVRSIIDANI 298          
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Nematostella
Match: EDO34007 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQL2])

HSP 1 Score: 135.191 bits (339), Expect = 2.722e-37
Identity = 110/314 (35.03%), Postives = 157/314 (50.00%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSN-FLRTFEGEAYSDPIKIRRELNRQNKDKL-AGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKK-RNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHT--------VKSLDFFDSNPYKGSIFSEGKEKPVKENLKS----FHVNTSHL--------SNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNY 927
            + +D KNDL + GLF E  Y S  D YK   N  FN ++ KGKQ++   +K +S+   GYF   F R  EGEA+SDP+K RR L+R    KL  GK F   +  K P G+G++YGTF+G +PA     +  SKS  +   +NF TN  KKGTGYGY+ +T    P+Y S+ Y   K   +KE                +    +FD NPYK    S+    PVK+  K+         SH         +  F ++P +  D +  K K+N        +  ++ F    GPK+    SI+N+N++R IN  N+
Sbjct:    4 VMNDVKNDLNRVGLFSELGYISIGDPYKI-QNGNFNLAAHKGKQMLPGGSKIRSSKQDGYFDQKFNRVMEGEAFSDPVK-RRRLDRLKATKLNIGKAFVPSNGDKLPSGIGNHYGTFAGAVPAF--SPVTKSKSAHVSPGKNFLTNPPKKGTGYGYLQVTIGASPKYMSDAYDRGKELRKKEMDTSGKQMKGGAFKLNLHPKSYFDGNPYK----SDRPLPPVKDGRKAKPDFKPFKPSHPPKEIGGMKAGCFTSYPSHSEDPFQPKKKKN-------GDGERKIFRPSQGPKSTPMKSIINQNVDRRINRLNF 302          
BLAST of UPF0602 protein C4orf47-like vs. Planmine SMEST
Match: SMESG000033217.1 (SMESG000033217.1)

HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 296/298 (99.33%), Postives = 297/298 (99.66%), Query Frame = 1
Query:   61 MASDKKNDLEKFGLFQEFPYQSDLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSLDFFDSNPYKGSIFSEGKEKPVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL 954
            MASDKKNDLEKFGLFQEFPYQSDLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSNFLRTFEGEAYSDPIKIRRELNR NK+KLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSLDFFDSNPYKGSIFSEGKEKPVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL
Sbjct:    1 MASDKKNDLEKFGLFQEFPYQSDLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSNFLRTFEGEAYSDPIKIRRELNRPNKEKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSLDFFDSNPYKGSIFSEGKEKPVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL 298          
BLAST of UPF0602 protein C4orf47-like vs. Planmine SMEST
Match: SMESG000078789.1 (SMESG000078789.1)

HSP 1 Score: 179.489 bits (454), Expect = 6.652e-54
Identity = 121/312 (38.78%), Postives = 173/312 (55.45%), Query Frame = 1
Query:   76 KNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETI-QFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILK--SSEEKENQNKPFHT-------VKSLDFFDSNPYKG--SIFSEGKEKPVKENLKSF------HVNTSHLSNSFNAFPKYENDVYDEKL-KRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVF 948
            K D+E+ GLF+E  Y +  D YK+    +FN S++KGKQ++    K+KSA N GYF  F R F+GE+YSDPIK+ R+   ++  K  GK +   +  K   G G+YYGTFSG IP    E I +  ++  I+ +NFYTN +KKG GYG+VG+T NKYPEY+SE Y   K  + +E E      H+       +   D+FD NPY G    +         +N K+F       ++    +  F +FP+Y ++ Y  K+ KR +    NV+N S RTF    GPK+    S+L +NI R+I   NY  + SV 
Sbjct:    4 KTDMERVGLFKELGYHTIGDPYKSSALQQFNQSASKGKQVLPGGEKSKSASNVGYFQEFTRIFDGESYSDPIKLMRKRRNESSKKKLGKNWVPVNGIKESCGSGTYYGTFSGAIPHF--EAISKEQRAKGIQGKNFYTNPAKKGVGYGFVGVTLNKYPEYQSEKYDRSKDITKQENEEHKSKLHSRGVFRLGMHLRDYFDMNPYSGPSEKYRVTSVNSKSQNFKTFKPSSPSKLDGGMKAGCFGSFPEYSSETYKAKIPKRPV----NVVNSSGRTFIPPIGPKSRPVNSVLQQNIIRTITPANYRQIQSVM 309          
BLAST of UPF0602 protein C4orf47-like vs. Planmine SMEST
Match: SMESG000042363.1 (SMESG000042363.1)

HSP 1 Score: 112.464 bits (280), Expect = 1.914e-28
Identity = 95/315 (30.16%), Postives = 152/315 (48.25%), Query Frame = 1
Query:   73 KKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSN-FLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKS----SEEKENQNKPFHTVKSL------DFFDSNPYKGSI--FSEGKEKPVKENLKSFHVNTSH-------LSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFS 951
            +K D+E+ GLF+E  Y +  D YK P  +       KGK  + +  ++K+A + GYF+  F R FEGE+ ++ + +RR    QNK+K  GK F + +  K   G GS  G     IP   G T +  +     K+NF TN  KKG+GYGY  +  N YPE+KS+ Y   ++     E  E+Q +  +  + +       +F SNPY+G +  + E   K V    K   +  S+              +P      Y +K  RNL  + +V N++ + +   PG K+    S+L KN+   +N  N  ++ +V +
Sbjct:    3 EKTDMERVGLFKEMGYHTINDPYK-PFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGIT-RTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNL--VHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMN 313          
The following BLAST results are available for this feature:
BLAST of UPF0602 protein C4orf47-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
C4orf471.327e-3332.06chromosome 4 open reading frame 47 [Source:HGNC Sy... [more]
C4orf473.432e-2439.51chromosome 4 open reading frame 47 [Source:HGNC Sy... [more]
C4orf475.310e-2439.51chromosome 4 open reading frame 47 [Source:HGNC Sy... [more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
C14H4orf472.687e-4033.54zgc:153146 [Source:NCBI gene;Acc:751702][more]
C14H4orf472.687e-4033.54zgc:153146 [Source:NCBI gene;Acc:751702][more]
zgc:1531463.460e-4033.54zgc:153146 [Source:NCBI gene;Acc:751702][more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
C4orf473.493e-3836.16chromosome 4 open reading frame 47 [Source:NCBI ge... [more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
1700029J07Rik1.269e-3732.91RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:... [more]
1700029J07Rik1.269e-3732.91RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:... [more]
1700029J07Rik2.400e-1139.60RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:... [more]
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BLAST of UPF0602 protein C4orf47-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q0P4C5|CD047_DANRE1.265e-3732.92UPF0602 protein C4orf47 homolog OS=Danio rerio OX=... [more]
sp|Q3U1D9|CD047_MOUSE8.877e-3732.91UPF0602 protein C4orf47 homolog OS=Mus musculus OX... [more]
sp|Q5XHC1|CD047_XENLA2.393e-3634.84UPF0602 protein C4orf47 homolog OS=Xenopus laevis ... [more]
sp|Q2T9M0|CD047_BOVIN5.866e-3432.60UPF0602 protein C4orf47 homolog OS=Bos taurus OX=9... [more]
sp|A7E2U8|CD047_HUMAN6.371e-3332.06UPF0602 protein C4orf47 OS=Homo sapiens OX=9606 GN... [more]
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BLAST of UPF0602 protein C4orf47-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267FK752.531e-5538.51Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1S3HMA83.013e-4937.38UPF0602 protein C4orf47 homolog isoform X1 OS=Ling... [more]
S4R9V41.046e-4838.33Zgc:153146 OS=Petromyzon marinus OX=7757 PE=4 SV=1[more]
A0A210QGT91.151e-4837.78UPF0602 protein C4orf47-like OS=Mizuhopecten yesso... [more]
A0A1S3HKS18.700e-4836.42UPF0602 protein C4orf47 homolog isoform X2 OS=Ling... [more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zgc:1531461.854e-3132.61chromosome 24 C4orf47 homolog [Source:NCBI gene;Ac... [more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zgc:1531468.034e-5338.33pep scaffold:Pmarinus_7.0:GL477013:54605:76454:-1 ... [more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO340072.722e-3735.03Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of UPF0602 protein C4orf47-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UPF0602 protein C4orf47-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000033217.10.000e+099.33SMESG000033217.1[more]
SMESG000078789.16.652e-5438.78SMESG000078789.1[more]
SMESG000042363.11.914e-2830.16SMESG000042363.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011676 ID=SMED30011676|Name=UPF0602 protein C4orf47-like|organism=Schmidtea mediterranea sexual|type=transcript|length=1004bp
GTGTTACTTGGCTACTACAATCATGGCTAAATGAATTCATAAATCTGTAT
CATTTACTTAATGGCTAGTGACAAAAAAAATGATTTAGAGAAGTTTGGAT
TATTTCAAGAATTTCCTTATCAAAGTGATTTGTATAAAACTCCAGGTAAT
TTTGAATTTAACGCATCTTCAGCTAAGGGAAAGCAAATTGTTATCGAGTC
AAATAAAACAAAATCTGCTTTGAATCATGGATATTTTTCAAATTTTCTAC
GAACGTTTGAAGGTGAAGCTTATTCTGATCCTATTAAAATTCGAAGAGAA
TTGAATAGACAGAATAAAGATAAGCTTGCAGGCAAAGTTTTTCACCTCCC
TAGTATTCCTAAAAACCCCGAGGGATTAGGAAGTTATTATGGAACTTTTT
CTGGACCTATTCCAGCGATGTTAGGGGAAACAATACAATTCTCAAAATCT
GATGAGATTAAAAAAAGAAACTTTTACACAAATTGTTCAAAGAAGGGTAC
TGGCTATGGATATGTTGGACTTACTTTTAATAAATATCCTGAATATAAAA
GTGAACCTTATGGCATATTGAAATCAAGTGAAGAGAAAGAAAATCAAAAT
AAACCTTTCCACACTGTTAAATCTTTGGATTTTTTTGATTCTAATCCTTA
TAAAGGATCTATATTTTCGGAAGGTAAAGAAAAACCAGTAAAAGAGAATT
TAAAGTCATTTCATGTCAACACGTCTCACTTATCAAATTCATTCAATGCA
TTTCCAAAATATGAAAATGATGTTTACGATGAAAAATTAAAAAGAAATTT
ACCCTATATTAAAAATGTAATGAATGATAGCAAGAGAACATTTGGAGCTA
TTCCAGGTCCTAAAACAATGAGAACATTTTCAATATTAAACAAAAACATC
GAAAGATCTATAAATGCACAGAATTATGGAACAGTTGGATCTGTGTTTTC
ATTATAAAAATAAAATATGAATTGTCAATATGAAATGAATGCCATGTGAA
TTAC
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protein sequence of SMED30011676-orf-1

>SMED30011676-orf-1 ID=SMED30011676-orf-1|Name=SMED30011676-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=299bp
MASDKKNDLEKFGLFQEFPYQSDLYKTPGNFEFNASSAKGKQIVIESNKT
KSALNHGYFSNFLRTFEGEAYSDPIKIRRELNRQNKDKLAGKVFHLPSIP
KNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYG
YVGLTFNKYPEYKSEPYGILKSSEEKENQNKPFHTVKSLDFFDSNPYKGS
IFSEGKEKPVKENLKSFHVNTSHLSNSFNAFPKYENDVYDEKLKRNLPYI
KNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFSL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000099neuron
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR029358DUF4586
IPR013809ENTH
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
GO:0005813centrosome
GO:0005815microtubule organizing center
GO:0005856cytoskeleton
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029358Protein of unknown function DUF4586PFAMPF15239DUF4586coord: 8..280
e-value: 1.2E-52
score: 180.0
IPR029358Protein of unknown function DUF4586PANTHERPTHR31144FAMILY NOT NAMEDcoord: 4..288