Eukaryotic translation initiation factor 3 subunit M

Overview
NameEukaryotic translation initiation factor 3 subunit M
Smed IDSMED30011661
Length (bp)1226
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Eukaryotic translation initiation factor 3 subunit M (SMED30011661) t-SNE clustered cells

Violin plots show distribution of expression levels for Eukaryotic translation initiation factor 3 subunit M (SMED30011661) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Eukaryotic translation initiation factor 3 subunit M (SMED30011661) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Eukaryotic translation initiation factor 3 subunit M (SMED30011661) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30011661

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30011661h1SMcG0011291 dd_Smed_v4_2680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30011661h1SMcG0011291 dd_Smed_v4_2680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011661h1SMcG0011291 dd_Smed_v4_2680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30011661h1SMcG0011291 dd_Smed_v4_2680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Human
Match: EIF3M (eukaryotic translation initiation factor 3 subunit M [Source:HGNC Symbol;Acc:HGNC:24460])

HSP 1 Score: 233.417 bits (594), Expect = 1.409e-72
Identity = 135/366 (36.89%), Postives = 205/366 (56.01%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MSV  F + S+  Q +E+  Y       +     E   H  L  II+  D+  ++   D D+  ++NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W    E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:    1 MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE--DDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 361
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Human
Match: EIF3M (eukaryotic translation initiation factor 3 subunit M [Source:HGNC Symbol;Acc:HGNC:24460])

HSP 1 Score: 188.734 bits (478), Expect = 4.688e-57
Identity = 95/227 (41.85%), Postives = 139/227 (61.23%), Query Frame = 1 
Query:  484 EISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKL 1164
            ++  W+ +W    E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N   +   L  L
Sbjct:   14 QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 239
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Human
Match: EIF3M (eukaryotic translation initiation factor 3 subunit M [Source:HGNC Symbol;Acc:HGNC:24460])

HSP 1 Score: 169.859 bits (429), Expect = 4.210e-50
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1 
Query:  589 STESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLIS--------GAV----PRSFGADQWTKLYKDLQMWQNNF 1134
            +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S        G++     R+FG  QW +LY  L  W+ N 
Sbjct:   22 ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSCSGELEGLGSICHSTHRTFGKQQWQQLYDTLNAWKQNL 214
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Human
Match: EIF3M (eukaryotic translation initiation factor 3 subunit M [Source:HGNC Symbol;Acc:HGNC:24460])

HSP 1 Score: 125.946 bits (315), Expect = 1.019e-33
Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 1 
Query:  235 INSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRK 810
            +NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W    E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y K
Sbjct:    1 MNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVK 191
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Human
Match: EIF3M (eukaryotic translation initiation factor 3 subunit M [Source:HGNC Symbol;Acc:HGNC:24460])

HSP 1 Score: 48.1358 bits (113), Expect = 1.288e-6
Identity = 30/104 (28.85%), Postives = 52/104 (50.00%), Query Frame = 1 
Query:  235 INSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNIL 543
            +NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W    E+   +L
Sbjct:    1 MNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLL 102
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Celegans
Match: cif-1 (COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261])

HSP 1 Score: 107.071 bits (266), Expect = 1.658e-25
Identity = 101/374 (27.01%), Postives = 192/374 (51.34%), Query Frame = 1 
Query:   46 VSIFTETSDFIQVSEILQYF--HDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNN---EKKERIKRFVLNSLFLGLTKNET-KIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCL-AGEPI-HDLLTIFVSGTINDYRKFLDAYPDFMDKY-GLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQ-LEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFK 1137
            + +F    D  Q+ E+ QY   HD+ + LD     E   + +  I   +++L      D D+  ++NS+ SLI+++  +     V+ F K +  +            I   VL++L+ G +   T + K +++L++    +     +  NL+ +      W+   E  + IL  ++R  +       + + M  LL ++T++ AA+ARDDA+ C+  A+ DP + + D +  L  V+ L   +P+    L +F+SGT+ DY++F+   P F+ ++  +D+   + KIR+L+LM+LA  +  E+S + + K+L  L  E  E FVI+A++  A++ K+++    +++S    R FG +QW  L K L++   N K
Sbjct:    7 LPVFAYIDDVKQLQELRQYLNKHDSVK-LDPNGPSETAQNMI-EICSTLNVL-PSWSQDVDL--VLNSISSLIVVVPGEKCEPVVDSFIKNVAPQFYKGTGWASHAGIAVRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELECNLETLQDRFNTWKTPVEGQREILRAVHRALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSFDHLERLSAVKALKTSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKIRLLTLMSLAE-EKNEISLDELAKQLDILADETLEEFVIDAIQVNAISGKINEMARTLIVSSYQHRRFGTEQWVLLEKRLKVLIANLK 374
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Celegans
Match: cif-1 (COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261])

HSP 1 Score: 107.071 bits (266), Expect = 1.658e-25
Identity = 101/374 (27.01%), Postives = 192/374 (51.34%), Query Frame = 1 
Query:   46 VSIFTETSDFIQVSEILQYF--HDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNN---EKKERIKRFVLNSLFLGLTKNET-KIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCL-AGEPI-HDLLTIFVSGTINDYRKFLDAYPDFMDKY-GLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQ-LEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFK 1137
            + +F    D  Q+ E+ QY   HD+ + LD     E   + +  I   +++L      D D+  ++NS+ SLI+++  +     V+ F K +  +            I   VL++L+ G +   T + K +++L++    +     +  NL+ +      W+   E  + IL  ++R  +       + + M  LL ++T++ AA+ARDDA+ C+  A+ DP + + D +  L  V+ L   +P+    L +F+SGT+ DY++F+   P F+ ++  +D+   + KIR+L+LM+LA  +  E+S + + K+L  L  E  E FVI+A++  A++ K+++    +++S    R FG +QW  L K L++   N K
Sbjct:    7 LPVFAYIDDVKQLQELRQYLNKHDSVK-LDPNGPSETAQNMI-EICSTLNVL-PSWSQDVDL--VLNSISSLIVVVPGEKCEPVVDSFIKNVAPQFYKGTGWASHAGIAVRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELECNLETLQDRFNTWKTPVEGQREILRAVHRALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSFDHLERLSAVKALKTSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKIRLLTLMSLAE-EKNEISLDELAKQLDILADETLEEFVIDAIQVNAISGKINEMARTLIVSSYQHRRFGTEQWVLLEKRLKVLIANLK 374
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Fly
Match: eIF3m (gene:FBgn0033902 transcript:FBtr0339964)

HSP 1 Score: 180.259 bits (456), Expect = 2.387e-52
Identity = 123/381 (32.28%), Postives = 207/381 (54.33%), Query Frame = 1 
Query:   43 SVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWH----DALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGL-TKNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKS 1170
            S  +F + S   QV E+ +YF    + L   I  E+ +    D L+ II   D+ F+D    + + GI+NS+VS+++ +  D   + V  +C+ + K    N    ++    L  LF  L T +  +   Y  L+      ++   +   + ++         + EQ+Q +   L+ +  + + E  S++ M+ LL ++T + A  AR+DA++CIV AL DPN   +D +L LKPV+ L G+ IHDLL+IFVS  +  Y +F + + +F++  GL+ E  M K+R+L+ M LA   + E+++ T+ KELQ+  ++ E FVIE ++ + V  +LDQ N+KV IS  + R+FGA QW +L   LQ W+ N   + E L  + S
Sbjct:    3 SHPVFIDLSLDEQVQELRKYF----KKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDG-EPSQIDGILNSIVSIMITIPLDRGENIVLAYCEKMTK--APNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLE-LSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAES-SPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSS 374
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Fly
Match: eIF3m (gene:FBgn0033902 transcript:FBtr0087579)

HSP 1 Score: 180.259 bits (456), Expect = 2.387e-52
Identity = 123/381 (32.28%), Postives = 207/381 (54.33%), Query Frame = 1 
Query:   43 SVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWH----DALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGL-TKNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKS 1170
            S  +F + S   QV E+ +YF    + L   I  E+ +    D L+ II   D+ F+D    + + GI+NS+VS+++ +  D   + V  +C+ + K    N    ++    L  LF  L T +  +   Y  L+      ++   +   + ++         + EQ+Q +   L+ +  + + E  S++ M+ LL ++T + A  AR+DA++CIV AL DPN   +D +L LKPV+ L G+ IHDLL+IFVS  +  Y +F + + +F++  GL+ E  M K+R+L+ M LA   + E+++ T+ KELQ+  ++ E FVIE ++ + V  +LDQ N+KV IS  + R+FGA QW +L   LQ W+ N   + E L  + S
Sbjct:    3 SHPVFIDLSLDEQVQELRKYF----KKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDG-EPSQIDGILNSIVSIMITIPLDRGENIVLAYCEKMTK--APNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLE-LSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAES-SPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSS 374
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Zebrafish
Match: eif3m (eukaryotic translation initiation factor 3, subunit M [Source:NCBI gene;Acc:334626])

HSP 1 Score: 223.787 bits (569), Expect = 4.097e-69
Identity = 131/380 (34.47%), Postives = 210/380 (55.26%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            MSV  F + ++  Q SE+  Y       +     E   H  L  II+  D+  +D   D D+  ++NS+VSL+L+++ + Q   +E  C+ L K      ++  ++  +L++LF G+ +N   +   Y SL+      +    +  +L ++  W+ +W  N E+   +L  +    ++  +   + + M+ LL S+T++ A+ AR DA RCIV AL+DPN    D +L LKPV+ L GE IHDLLTIFVS  +  Y KF  +  DF++  GL  E  M+K+R+L+ M +A  +  E+S+ T+Q+ELQ+  ED EAFVI+AVR + V  K+DQ   KV++S +  R+FG  QW +LY  L  W+ N   +   L+ L   A
Sbjct:    1 MSVPAFIDITEEDQASELRSYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKD--DDKDVESVMNSIVSLLLILETEKQEALIESLCEKLVK--FREGERPSLRMQLLSNLFHGMDENTPVRHTVYCSLIKVAATCNAITFMPTDLDQVRKWIVDWNLNTEKKHTLLRLVYEALVDCKKSEAAAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTYLFDHLLALKPVRFLEGELIHDLLTIFVSAKLISYVKFYQSNKDFIESLGLSHEQNMSKMRLLTFMGMAV-EMKEISFETMQQELQIGAEDVEAFVIDAVRTKMVYSKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLCSWKQNLSTVKSSLQTLSPTA 375
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Zebrafish
Match: cops7a (COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680])

HSP 1 Score: 62.003 bits (149), Expect = 2.235e-10
Identity = 48/166 (28.92%), Postives = 83/166 (50.00%), Query Frame = 1 
Query:  637 AASARDDAIRCIVAALQDPNALTMDQILELKPVQCL---AGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMW 1122
            + SA   AI  I   L+ P       ILEL  V+ L      P++ LL +F  GT  DY++   + P+          A   K+R LS+++LA+ +   L Y+ + ++L+L+   + E  +IEA+    +  KLDQ+N++V +  ++ R  G ++   +   LQ W
Sbjct:   10 SGSALAQAISSI---LETPGLYVFSDILELPNVRELETGPHAPVYQLLNLFAYGTYCDYKERTASLPELTP-------AQRNKLRHLSIISLAS-NLKCLPYSLLLQQLELKNVRELEDLLIEAIYSDIIHGKLDQRNQQVEVDCSIGRDLGPNELPNIANTLQEW 164
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Zebrafish
Match: cops7a (COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680])

HSP 1 Score: 61.6178 bits (148), Expect = 2.337e-10
Identity = 48/166 (28.92%), Postives = 83/166 (50.00%), Query Frame = 1 
Query:  637 AASARDDAIRCIVAALQDPNALTMDQILELKPVQCL---AGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMW 1122
            + SA   AI  I   L+ P       ILEL  V+ L      P++ LL +F  GT  DY++   + P+          A   K+R LS+++LA+ +   L Y+ + ++L+L+   + E  +IEA+    +  KLDQ+N++V +  ++ R  G ++   +   LQ W
Sbjct:   10 SGSALAQAISSI---LETPGLYVFSDILELPNVRELETGPHAPVYQLLNLFAYGTYCDYKERTASLPELTP-------AQRNKLRHLSIISLAS-NLKCLPYSLLLQQLELKNVRELEDLLIEAIYSDIIHGKLDQRNQQVEVDCSIGRDLGPNELPNIANTLQEW 164
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Xenopus
Match: eif3m (eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:448014])

HSP 1 Score: 222.246 bits (565), Expect = 2.117e-68
Identity = 133/380 (35.00%), Postives = 210/380 (55.26%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            MSV  F + ++  Q +E+  Y       +     E   H  L  II+  D+  +D   D D+   +NSVVSL+L+++ D Q   +E  C+ L K         R++  +L++LF G+ K+   +   Y  L+           I  +L ++  W+ +W  + E+   +L  L    ++  +   + + M+ LL S+TD+ A+ AR DA +CIV AL+DP A  +D +L LKPV+ L GE IHDLLTIFVS  ++ Y KF     DF+D  GL  E  M K+R+L+ M +A  D  E+S++TIQ+ELQ+  ++ EAF+I+AV+ + V CK+DQ  ++V++S +  R+FG  QW +LY  L  W+ N   +   L  + SDA
Sbjct:    1 MSVPAFIDVTEEDQAAELRAYLKSKGAEISEENSEGGLHIDLAQIIEACDVCLKD--DDKDVESSMNSVVSLVLILETDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKSIPARYTVYCGLIKVAATCGAIIYIPTDLDQVRKWISDWNLSTEKKHIVLRLLYEALVDCKKSDEAAKVMVELLGSYTDDNASQARLDAHKCIVRALKDPKAFLLDHLLALKPVKFLEGELIHDLLTIFVSAKLSSYVKFYQNNKDFIDSLGLSHEQNMEKMRLLTFMGMAV-DNKEISFDTIQQELQIGADEVEAFIIDAVKTKMVYCKIDQTQKRVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNKVKNSLYSI-SDA 374
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Xenopus
Match: eif3m (eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:448014])

HSP 1 Score: 193.741 bits (491), Expect = 6.174e-58
Identity = 129/379 (34.04%), Postives = 194/379 (51.19%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            MSV  F + ++  Q +E+  Y       +     E   H  L  II+  D+  +D   D D+   +NSVVSL+L+++ D Q   +E  C+    K+    + ER       SL L LT                   +KKH++                        L  L    ++  +   + + M+ LL S+TD+ A+ AR DA +CIV AL+DP A  +D +L LKPV+ L GE IHDLLTIFVS  ++ Y KF     DF+D  GL  E  M K+R+L+ M +A  D  E+S++TIQ+ELQ+  ++ EAF+I+AV+ + V CK+DQ  ++V++S +  R+FG  QW +LY  L  W+ N   +   L  + SDA
Sbjct:    1 MSVPAFIDVTEEDQAAELRAYLKSKGAEISEENSEGGLHIDLAQIIEACDVCLKD--DDKDVESSMNSVVSLVLILETDKQEALIESLCE----KLVKFREGER------PSLRLQLT-------------------EKKHIV------------------------LRLLYEALVDCKKSDEAAKVMVELLGSYTDDNASQARLDAHKCIVRALKDPKAFLLDHLLALKPVKFLEGELIHDLLTIFVSAKLSSYVKFYQNNKDFIDSLGLSHEQNMEKMRLLTFMGMAV-DNKEISFDTIQQELQIGADEVEAFIIDAVKTKMVYCKIDQTQKRVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNKVKNSLYSI-SDA 322
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Mouse
Match: Eif3m (eukaryotic translation initiation factor 3, subunit M [Source:MGI Symbol;Acc:MGI:1351744])

HSP 1 Score: 235.343 bits (599), Expect = 1.630e-73
Identity = 136/366 (37.16%), Postives = 206/366 (56.28%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MSV  F + S+  Q +E+  Y       L     E   H  L  II+  D+  ++   D D+  ++NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W+   E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:    1 MSVPAFIDISEEDQAAELRAYLKSKGAELSEENSEGGLHVDLAQIIEACDVCLKE--DDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWKLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 361
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Mouse
Match: Eif3m (eukaryotic translation initiation factor 3, subunit M [Source:MGI Symbol;Acc:MGI:1351744])

HSP 1 Score: 189.504 bits (480), Expect = 1.926e-57
Identity = 93/217 (42.86%), Postives = 137/217 (63.13%), Query Frame = 1 
Query:  484 EISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            ++  W+ +W+   E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:   14 QVRKWISDWKLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 229
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Mouse
Match: Eif3m (eukaryotic translation initiation factor 3, subunit M [Source:MGI Symbol;Acc:MGI:1351744])

HSP 1 Score: 114.39 bits (285), Expect = 3.992e-30
Identity = 67/188 (35.64%), Postives = 86/188 (45.74%), Query Frame = 1 
Query:  601 MMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKL 1164
            M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D                                                    VR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N   +   L  L
Sbjct:    2 MVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLA-------------------------------------------------VRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Mouse
Match: Cops7a (COP9 signalosome subunit 7A [Source:MGI Symbol;Acc:MGI:1349400])

HSP 1 Score: 48.521 bits (114), Expect = 4.266e-6
Identity = 48/185 (25.95%), Postives = 82/185 (44.32%), Query Frame = 1 
Query:  637 AASARDDAIRCIV-AALQDPNALTMDQILELKPVQCLAGEPIHD---LLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            A SA+  A+  ++   L+ P      ++L++  V+ LA         LLT+F  GT  DY       P   D       A   K+R LS++TLAA     + Y  + + L L      E  VIEAV    +   LDQ+N+++ +  ++ R       + + + LQ W    ++++  + +  S A
Sbjct:   19 AKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTD-------AQKNKLRHLSVVTLAA-KVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRA 195
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Mouse
Match: Cops7a (COP9 signalosome subunit 7A [Source:MGI Symbol;Acc:MGI:1349400])

HSP 1 Score: 48.9062 bits (115), Expect = 5.550e-6
Identity = 48/185 (25.95%), Postives = 82/185 (44.32%), Query Frame = 1 
Query:  637 AASARDDAIRCIV-AALQDPNALTMDQILELKPVQCLAGEPIHD---LLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            A SA+  A+  ++   L+ P      ++L++  V+ LA         LLT+F  GT  DY       P   D       A   K+R LS++TLAA     + Y  + + L L      E  VIEAV    +   LDQ+N+++ +  ++ R       + + + LQ W    ++++  + +  S A
Sbjct:   19 AKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTD-------AQKNKLRHLSVVTLAA-KVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRA 195
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. UniProt/SwissProt
Match: sp|Q5DHT6|EIF3M_SCHJA (Eukaryotic translation initiation factor 3 subunit M OS=Schistosoma japonicum OX=6182 GN=SJCHGC06559 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.307e-77
Identity = 140/383 (36.55%), Postives = 222/383 (57.96%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFH-------DNERCLDVTIKEEEWHDALNHIIDNIDLLFEDK-ISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINSDKKHLIN---INLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDL 1155
            MS+++F + +D  QV+E+ ++         DN  C D       W D L   I  +++ ++D+ I+++D   ++ SV S+ + + P+   + V  FC+ L     +N ++ + K F LN LF GL  N      YE  L     ++K  ++N    + K+++ WL E  C  E+ Q +  KL    I   E R + E+M+ LLS++ +  A +AR +AI+CI++ LQDP  L+ DQ+  LKPVQ L GEP+HD   IFVSG +N ++ FL  +P+F+    L +EAC+ K+R+L+LM L+  +  ELSY+    +L L+ E+ E F+IEAVRQ+AV CKLDQ  +K+LI+GA PR+FG  QW  L+  L  W+++   +   L
Sbjct:    1 MSIAVFIDGTDAQQVTELKKFLKSYGAKVLDNTECSDAN-----WPDELIKCIKFLNVCWKDESIAESDAKDVLTSVASMFIQLPPNKLIEAVPLFCEKLLDFSGDNIRRHKNKLFPLNLLFWGL--NPKSHPRYEIFLTLIECAEKMGVLNEVITDPKKVASWLSECDCTVEECQKVWQKLYDAHIALGENRKAIEAMIYLLSTYNEVTAVNARQNAIKCIISVLQDPCLLSHDQLYALKPVQYLEGEPVHDFFKIFVSGDLNTFKNFLAKHPNFLSHNNLSEEACVHKLRLLTLMQLSE-NVNELSYHEAATQLGLKIEELEPFIIEAVRQRAVACKLDQVQKKILITGAFPRTFGRPQWINLHDTLVQWRSHLGTVQSSL 375
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. UniProt/SwissProt
Match: sp|Q99JX4|EIF3M_MOUSE (Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.140e-72
Identity = 136/366 (37.16%), Postives = 206/366 (56.28%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MSV  F + S+  Q +E+  Y       L     E   H  L  II+  D+  ++   D D+  ++NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W+   E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:    1 MSVPAFIDISEEDQAAELRAYLKSKGAELSEENSEGGLHVDLAQIIEACDVCLKE--DDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWKLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 361
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. UniProt/SwissProt
Match: sp|Q7L2H7|EIF3M_HUMAN (Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=EIF3M PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 6.766e-72
Identity = 135/366 (36.89%), Postives = 205/366 (56.01%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MSV  F + S+  Q +E+  Y       +     E   H  L  II+  D+  ++   D D+  ++NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W    E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:    1 MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE--DDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 361
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. UniProt/SwissProt
Match: sp|Q5R8C4|EIF3M_PONAB (Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.216e-72
Identity = 135/366 (36.89%), Postives = 205/366 (56.01%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MSV  F + S+  Q +E+  Y       +     E   H  L  II+  D+  ++   D D+  ++NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W    E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:    1 MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHIDLAQIIEACDVCLKE--DDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 361
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. UniProt/SwissProt
Match: sp|Q3T148|EIF3M_BOVIN (Eukaryotic translation initiation factor 3 subunit M OS=Bos taurus OX=9913 GN=EIF3M PE=2 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 3.473e-70
Identity = 135/366 (36.89%), Postives = 205/366 (56.01%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MSV  F + S+  Q +E+  Y       +     E   H  L  II+  D+  ++   D D+  ++NSVVSL+L+++PD Q   +E  C+ L K         R++  +L++LF G+ KN   +   Y SL+    +      I   L ++  W+ +W    E+   +L  L    ++  +   +++ M+ LL S+T++ A+ AR DA RCIV AL+DPNA   D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF+D  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  +D EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N 
Sbjct:    1 MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE--DDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLA-YVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 360
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. TrEMBL
Match: A0A5K4F9L7 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.165e-80
Identity = 144/379 (37.99%), Postives = 227/379 (59.89%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHD-NERCLDVT-IKEEEWHDALNHIIDNIDLLFEDK-ISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLT-KNETKIKTYESLLNAEINSDKKHLIN---INLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDL 1155
            MSV++F + +D  QV+E+ ++      + LD T   +  W D L   +  ID+ ++D+ I++ D+  ++ SV S+ + + PD   D V  FC+ L     +N ++ R K F LN LF GL  K+  + + Y +L+     ++K  ++N      K+++ WL E  C  E+ Q +  KL    I   E R + E+M+ LLS++ +  A  AR +AI+CI++ LQDP+ L+ DQ+  LKPVQ L GEP+HD   IFVSG +N +R FL  +P+F+++  L +EAC+ K+R+L+LM L+  +  ELSY     +L L+ E+ E F+IEAVRQ+AV CKLDQ  +K+LI+GA PR+FG  QW  L+  L  W+++   +   L
Sbjct:    1 MSVAVFIDGTDAKQVTELKRFLKSYGAKVLDSTECTDTNWPDELIKCLKYIDICWKDETIAEADVNDVLASVASIFIQLPPDKLIDAVHLFCEKLLDFSGDNTRRHRSKLFPLNLLFCGLNPKSHPRYEIYLTLIEC---AEKMGVLNEVITAPKKVASWLSECDCTVEECQKVWQKLYDAHISMGESRKAIEAMIYLLSTYNELTAMDARQNAIKCIISVLQDPSLLSHDQLYALKPVQYLEGEPVHDFFKIFVSGDLNTFRNFLTKHPNFLNQNNLSEEACIHKLRLLTLMQLSE-NVNELSYQDAAAQLNLKIEELEPFIIEAVRQRAVACKLDQVQKKILITGAFPRTFGRPQWVNLHDTLVQWRSHLGTVQSSL 375
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. TrEMBL
Match: A0A4S2LSN3 (Eukaryotic translation initiation factor 3 subunit M OS=Opisthorchis felineus OX=147828 GN=CRM22_005149 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.547e-75
Identity = 138/369 (37.40%), Postives = 219/369 (59.35%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNE-RCLDVT-IKEEEWHDALNHIIDNIDLLF-EDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNET-KIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
            MS+ +F   ++  QV+E+ ++   +  + LD T  ++E W D     I  + + + +D +S++D+  ++ +V SL++ + P    D ++  C+        N +K R K F LN LF GL  ++  K   Y +L+           I  + K+++ WL + QC+ E+ QN+   L     E  E R +TE+++ LLS+FT+  AA AR DAI+CI++ +QDP+ L  DQ+  L+P+Q L GEP+HD   IFVSG +  ++ FL  +PDF+ + GLD++AC+ K+R+L+LM L+  + TELSY+   KEL+L   + E F+IEAVRQ++V CKLDQ N ++LI+GA PR+FG  QW  L   L  W    
Sbjct:    1 MSLGVFISCNEAKQVTELKKFLKTHGVKTLDSTETRQENWWDDFRKCIHQLSICWKDDSVSESDVNDVLTTVASLVIQLPPTQSDDVIKLLCEQYLDFSGENTRKHRSKLFSLNLLFHGLRPDDHLKCVIYVTLVLCARKLGLVSQIIYDPKKVTAWLTKCQCSVEERQNVWRILYETHSELGETRRATEALVYLLSTFTEATAAQARQDAIKCIISVIQDPSLLAHDQLHTLRPIQFLEGEPVHDFFKIFVSGNLATFKAFLKTHPDFLSQNGLDEDACLHKLRLLTLMQLSE-NQTELSYDAAAKELELPLGELEPFIIEAVRQRSVACKLDQVNRRILITGAFPRTFGRPQWASLRDTLIQWHTGL 368
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. TrEMBL
Match: A0A4Z2DP91 (Eukaryotic translation initiation factor 3 subunit M OS=Schistosoma japonicum OX=6182 GN=EWB00_010515 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.874e-75
Identity = 140/383 (36.55%), Postives = 222/383 (57.96%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFH-------DNERCLDVTIKEEEWHDALNHIIDNIDLLFEDK-ISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINSDKKHLIN---INLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDL 1155
            MS+++F + +D  QV+E+ ++         DN  C D       W D L   I  +++ ++D+ I+++D   ++ SV S+ + + P+   + V  FC+ L     +N ++ + K F LN LF GL  N      YE  L     ++K  ++N    + K+++ WL E  C  E+ Q +  KL    I   E R + E+M+ LLS++ +  A +AR +AI+CI++ LQDP  L+ DQ+  LKPVQ L GEP+HD   IFVSG +N ++ FL  +P+F+    L +EAC+ K+R+L+LM L+  +  ELSY+    +L L+ E+ E F+IEAVRQ+AV CKLDQ  +K+LI+GA PR+FG  QW  L+  L  W+++   +   L
Sbjct:    1 MSIAVFIDGTDAQQVTELKKFLKSYGAKVLDNTECSDAN-----WPDELIKCIKFLNVCWKDESIAESDAKDVLTSVASMFIQLPPNKLIEAVPLFCEKLLDFSGDNIRRHKNKLFPLNLLFWGL--NPKSHPRYEIFLTLIECAEKMGVLNEVITDPKKVASWLSECDCTVEECQKVWQKLYDAHIALGENRKAIEAMIYLLSTYNEVTAVNARQNAIKCIISVLQDPCLLSHDQLYALKPVQYLEGEPVHDFFKIFVSGDLNTFKNFLAKHPNFLSHNNLSEEACVHKLRLLTLMQLSE-NVNELSYHEAATQLGLKIEELEPFIIEAVRQRAVACKLDQVQKKILITGAFPRTFGRPQWINLHDTLVQWRSHLGTVQSSL 375
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. TrEMBL
Match: A0A183T8X4 (PCI domain-containing protein OS=Schistocephalus solidus OX=70667 PE=4 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 8.726e-73
Identity = 126/349 (36.10%), Postives = 206/349 (59.03%), Query Frame = 1 
Query:  136 IKEEEWHDALNHIIDNIDLLF-EDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTK-NETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            + +E W  A    I  + + +  DK+++     ++ +V SLI+ +  D     VE  C + E+      ++   K + LN LF GLT+ +  + + Y++L+         H I  N + ++  LK  +C  E+ + +  +L+ + +     + +T++++ LLS++T   A  AR+DA+RCIVAA+QD + L+  +++ L+PVQ L GEPIH LL IFVSG ++D+  F   YP F+ + GL +EAC++KIRIL LM +A  +  EL Y T+ K+++L  +  EAFVIEAVRQ+ +TCKLDQ N ++LI+ A+PR+FG  QW  L K LQ W+   +++   L  +   A
Sbjct:   23 VTQENWVSAFIKCIPLLSVCWTNDKVTEAQAIDLLTTVASLIIQLPVDSIPQAVEKLCVLFEEFKSPVNRRHLAKLYSLNVLFAGLTEEDHARFRIYQALITCAHKVGALHQIFTNTERVANLLKACRCTPEECKKLWRQLSEVHMATGNTKQATQALINLLSTYTAGNAVDARNDAVRCIVAAIQDLSFLSHSRLMALEPVQFLEGEPIHKLLGIFVSGGLSDFSAFTKKYPKFLSENGLTEEACLSKIRILCLMEMAE-NIAELDYETVCKKIELPEDQLEAFVIEAVRQKVITCKLDQINRRILITSALPRNFGRSQWLSLAKTLQEWRVGLRVVQSSLGTMIGAA 370
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. TrEMBL
Match: A0A3P7EIJ1 (PCI domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS12922 PE=4 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.036e-72
Identity = 126/349 (36.10%), Postives = 206/349 (59.03%), Query Frame = 1 
Query:  136 IKEEEWHDALNHIIDNIDLLF-EDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTK-NETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            + +E W  A    I  + + +  DK+++     ++ +V SLI+ +  D     VE  C + E+      ++   K + LN LF GLT+ +  + + Y++L+         H I  N + ++  LK  +C  E+ + +  +L+ + +     + +T++++ LLS++T   A  AR+DA+RCIVAA+QD + L+  +++ L+PVQ L GEPIH LL IFVSG ++D+  F   YP F+ + GL +EAC++KIRIL LM +A  +  EL Y T+ K+++L  +  EAFVIEAVRQ+ +TCKLDQ N ++LI+ A+PR+FG  QW  L K LQ W+   +++   L  +   A
Sbjct:   23 VTQENWVSAFIKCIPLLSVCWTNDKVTEAQAIDLLTTVASLIIQLPVDSIPQAVEKLCVLFEEFKSPVNRRHLAKLYSLNVLFAGLTEEDHARFRIYQALITCAHKVGALHQIFTNTERVANLLKACRCTPEECKKLWRQLSEVHMATGNTKQATQALINLLSTYTAGNAVDARNDAVRCIVAAIQDLSFLSHSRLMALEPVQFLEGEPIHKLLGIFVSGGLSDFSAFTKKYPKFLSENGLTEEACLSKIRILCLMEMAE-NIAELDYETVCKKIELPEDQLEAFVIEAVRQKVITCKLDQINRRILITSALPRNFGRSQWLSLAKTLQEWRVGLRVVQSSLGTMIGAA 370
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Cavefish
Match: eif3m (eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:103034522])

HSP 1 Score: 225.328 bits (573), Expect = 9.210e-70
Identity = 133/381 (34.91%), Postives = 211/381 (55.38%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDAP 1179
            MSV  F + ++  Q SE+  Y       +     E   H  L  II+  D+  +D   D D+  ++NS+VSL+L+++ + Q   +E  C+ L K      ++  ++  +L++LF G+ +N   +   Y SL+      +  + I  +L ++  W+ +W    E+   +L  +    ++  +   + + M+ LL S+T++ A+ AR DA RCIV AL+DPN    D +L LKPV+ L GE IHDLLTIFVS  +  Y KF  +  DF+D  GL  E  M K+R+L+ M +A  +  E+ ++T+Q+ELQ+  ED EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +LY  L  W+ N   +   L+ L S  P
Sbjct:    1 MSVPAFIDITEEDQASELRAYIKSKGAEISEENSEGGLHVDLAQIIEACDVCLKD--DDKDVESVMNSIVSLLLILETEKQEALIESLCEKLVK--FREGERPSLRMQLLSNLFHGMDENTPVRYMVYCSLIKVAATCNAINFIPTDLDQVRKWIIDWNLTTEKKHTLLRLVYDALVDCKKSEPAAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLALKPVRFLEGELIHDLLTIFVSAKLVSYVKFYQSNKDFIDSLGLSHEQNMAKMRLLTFMGMAV-EMKEILFDTMQQELQIGAEDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLSSWKQNLVTVKSSLQTL-SPTP 375
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Cavefish
Match: cops7a (COP9 signalosome subunit 7A [Source:NCBI gene;Acc:103036911])

HSP 1 Score: 60.4622 bits (145), Expect = 6.019e-10
Identity = 45/157 (28.66%), Postives = 80/157 (50.96%), Query Frame = 1 
Query:  664 RCIVAALQDPNALTMDQILELKPVQCL---AGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMW 1122
            + I + L+ P       ILEL  V+ L      P++ LL +F  GT +DY++   + P+              K+R LS+++LA+ +   L Y+ + ++L+L+   + E  +IEAV    +  KLDQ+N++V +  +V R  G ++   +   LQ W
Sbjct:   16 QAISSLLETPGLYVFSDILELPNVRELETGPHAPVYQLLNLFAYGTYSDYKERAASLPELTPSQ-------RNKLRHLSIISLAS-NLKCLPYSLLLQQLELKNVRELEDLLIEAVYCDIIHGKLDQRNQQVEVDFSVGRDLGPNELPNIANTLQEW 164
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Nematostella
Match: EDO34250 (Eukaryotic translation initiation factor 3 subunit M [Source:UniProtKB/Swiss-Prot;Acc:A7SPX9])

HSP 1 Score: 202.601 bits (514), Expect = 2.220e-61
Identity = 116/332 (34.94%), Postives = 192/332 (57.83%), Query Frame = 1 
Query:  154 HDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRF-VLNSLFLGLT-KNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTES---MMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNF 1134
             D L  I++   + F++   D ++  ++NS++SL+L++ P+ + + ++  C  L+  M  +E      R  VL+ LF GL  K+  + + Y + L     +     I   L+ + GWL  W  + +Q + +   L+      H+E+ S E+   M+ LLS++TDE A++AR+DA  C+V+ L  PN L MD IL LKPV  L G+PI+ LL IFVSG + DY+KF D+  DF++  GL  E  + K+R+L+LM++   +T E+SY  +  +L +  ++ E F+IEA++   V  +LDQ + KV+IS    R+FG +QW  L+  L  W++N 
Sbjct:   40 QDELAEILECCQVCFKE---DAELESVMNSILSLVLVV-PEKRNELIKKCCDKLKANMSEDENSSAAARLRVLSVLFSGLPEKDPMRHEVYCTQLTIAAKASLVDDIPTELELVKGWLGLWDVDADQRRQVFRLLHGAL---HDEKRSEEASKVMIELLSTYTDENASAAREDAKSCVVSCLTKPNVLIMDNILSLKPVAVLQGDPIYQLLQIFVSGDVQDYKKFYDSNTDFINSIGLSHEMNLKKMRVLTLMSIGK-ETDEISYEDLATKLGISSDEIEQFLIEAIQTGLVKARLDQVHRKVIISSVAQRTFGINQWQNLHSRLVKWRDNL 363
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Nematostella
Match: EDO38492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCT7])

HSP 1 Score: 56.225 bits (134), Expect = 6.081e-9
Identity = 44/167 (26.35%), Postives = 81/167 (48.50%), Query Frame = 1 
Query:  637 AASARDDAIRCIVA-ALQDPNALTMDQILELKPVQCLA---GEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMW 1122
            A SAR  A+  ++   L+ P      +++E+  +Q LA     P   LL IF  GT  DY+  +   P             + K+R L++++LA+  +  + Y+ + KEL++    + E  +IEA+    +  KLDQ+N+++ +  A+ R    +    + + LQ W
Sbjct:   20 AKSARGAALTALIKQVLEAPALYVFGELIEMSNIQELAKTENAPFWQLLNIFAFGTYTDYKDNMGTLPPLTP-------VQIKKLRHLTIVSLAS-KSKFIPYSLLLKELEISNLRELEDLIIEAIYADIIHGKLDQKNKQLEVEYAMGRDIKPETVGTIAEILQDW 178
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Medaka
Match: EIF3M (eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:101174734])

HSP 1 Score: 227.639 bits (579), Expect = 1.184e-70
Identity = 133/380 (35.00%), Postives = 210/380 (55.26%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKN-ETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDA 1176
            MSV  F + ++  Q SE+  Y       +     E   H  L  II+  D+  +D   D D+  ++NS+VSL+L+++ D Q   +E  C+ L K         R++  +L++LF G+ +N   +   + SL+      +    I  +L ++  W+ +W  N E+   +L  +    ++  +   + + M+ LL S+T++ A+ AR DA RCIV AL+DPN    D +L LKPV+ L GE IHDLLTIFVS  +  Y KF     DF++  GL  E  M K+R+L+ M +A  +  E+S++T+Q+ELQ+  ED EAFVI+AVR + V CK+DQ   KV++S +  R+FG  QW +L++ L  W+ N   +   L+ L   A
Sbjct:    1 MSVPAFIDITEEDQASELRAYIKSKGAEISEENAEGGLHVDLAQIIEACDVCLKD--DDKDVESVMNSIVSLLLILETDKQEALIESLCEKLVKFREGERPSLRLQ--LLSNLFHGMDENTPVRYTVFCSLIKVAATCNAISFIPTDLDQVRKWIVDWNLNTEKKHTLLRLVYEALVDCKKSEPAAKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLTLKPVRFLEGELIHDLLTIFVSAKLAAYVKFYQNNKDFIESLGLSHEQNMAKMRLLTFMGMAV-EFKEISFDTMQQELQVGAEDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLHEKLSSWKANLATVKTSLQALSPSA 375
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Medaka
Match: cops7a (COP9 signalosome subunit 7A [Source:NCBI gene;Acc:101156353])

HSP 1 Score: 59.6918 bits (143), Expect = 8.816e-10
Identity = 45/165 (27.27%), Postives = 83/165 (50.30%), Query Frame = 1 
Query:  664 RCIVAALQDPNALTMDQILELKPVQCL---AGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLER-EDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIII 1146
            + + + L+ P       ILEL  V+ L      P++ LL +F  GT  DY++   + P+          A   K+R LS+++LA+ +   L Y+ + ++L+L+   + E  +IEAV    +  KLDQ+N++V +  +V R  G ++   +   LQ W    + ++
Sbjct:   16 QAVSSLLETPGLYVFSDILELPNVRELENGPHAPVYQLLNLFAYGTYCDYKERAASLPELTP-------AQRNKLRHLSIISLAS-NLKCLPYSLLLQQLELKNVRELEDLLIEAVYCDIIQGKLDQRNQQVEVDCSVGRDLGPNELPNIINTLQEWCTGCEAVL 172
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Planmine SMEST
Match: SMESG000077210.1 (SMESG000077210.1)

HSP 1 Score: 784.252 bits (2024), Expect = 0.000e+0
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 
Query:   40 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDAPV 1182
            MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDAPV
Sbjct:    1 MSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEEWHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEPFCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINSDKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTESMMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAGEPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMTLAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVLISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDAPV 381
The following BLAST results are available for this feature:
BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
EIF3M1.409e-7236.89eukaryotic translation initiation factor 3 subunit... [more]
EIF3M4.688e-5741.85eukaryotic translation initiation factor 3 subunit... [more]
EIF3M4.210e-5045.88eukaryotic translation initiation factor 3 subunit... [more]
EIF3M1.019e-3337.31eukaryotic translation initiation factor 3 subunit... [more]
EIF3M1.288e-628.85eukaryotic translation initiation factor 3 subunit... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
cif-11.658e-2527.01COP9/Signalosome and eIF3 complex-shared subunit 1... [more]
cif-11.658e-2527.01COP9/Signalosome and eIF3 complex-shared subunit 1... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
eIF3m2.387e-5232.28gene:FBgn0033902 transcript:FBtr0339964[more]
eIF3m2.387e-5232.28gene:FBgn0033902 transcript:FBtr0087579[more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
eif3m4.097e-6934.47eukaryotic translation initiation factor 3, subuni... [more]
cops7a2.235e-1028.92COP9 constitutive photomorphogenic homolog subunit... [more]
cops7a2.337e-1028.92COP9 constitutive photomorphogenic homolog subunit... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
eif3m2.117e-6835.00eukaryotic translation initiation factor 3 subunit... [more]
eif3m6.174e-5834.04eukaryotic translation initiation factor 3 subunit... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Eif3m1.630e-7337.16eukaryotic translation initiation factor 3, subuni... [more]
Eif3m1.926e-5742.86eukaryotic translation initiation factor 3, subuni... [more]
Eif3m3.992e-3035.64eukaryotic translation initiation factor 3, subuni... [more]
Cops7a4.266e-625.95COP9 signalosome subunit 7A [Source:MGI Symbol;Acc... [more]
Cops7a5.550e-625.95COP9 signalosome subunit 7A [Source:MGI Symbol;Acc... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q5DHT6|EIF3M_SCHJA1.307e-7736.55Eukaryotic translation initiation factor 3 subunit... [more]
sp|Q99JX4|EIF3M_MOUSE1.140e-7237.16Eukaryotic translation initiation factor 3 subunit... [more]
sp|Q7L2H7|EIF3M_HUMAN6.766e-7236.89Eukaryotic translation initiation factor 3 subunit... [more]
sp|Q5R8C4|EIF3M_PONAB7.216e-7236.89Eukaryotic translation initiation factor 3 subunit... [more]
sp|Q3T148|EIF3M_BOVIN3.473e-7036.89Eukaryotic translation initiation factor 3 subunit... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5K4F9L75.165e-8037.99Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
A0A4S2LSN32.547e-7537.40Eukaryotic translation initiation factor 3 subunit... [more]
A0A4Z2DP913.874e-7536.55Eukaryotic translation initiation factor 3 subunit... [more]
A0A183T8X48.726e-7336.10PCI domain-containing protein OS=Schistocephalus s... [more]
A0A3P7EIJ11.036e-7236.10PCI domain-containing protein OS=Schistocephalus s... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
eif3m9.210e-7034.91eukaryotic translation initiation factor 3 subunit... [more]
cops7a6.019e-1028.66COP9 signalosome subunit 7A [Source:NCBI gene;Acc:... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO342502.220e-6134.94Eukaryotic translation initiation factor 3 subunit... [more]
EDO384926.081e-926.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
EIF3M1.184e-7035.00eukaryotic translation initiation factor 3 subunit... [more]
cops7a8.816e-1027.27COP9 signalosome subunit 7A [Source:NCBI gene;Acc:... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit M vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000077210.10.000e+0100.00SMESG000077210.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011661 ID=SMED30011661|Name=Eukaryotic translation initiation factor 3 subunit M|organism=Schmidtea mediterranea sexual|type=transcript|length=1226bp
GTTGCACATCTTGTTTTAATATTGCTGTTATTTAAAAACATGAGTGTGTC
TATTTTTACAGAAACTTCTGATTTTATTCAAGTATCTGAAATTCTTCAAT
ACTTCCATGATAATGAGAGATGTTTAGATGTTACGATAAAAGAGGAAGAA
TGGCACGATGCATTGAACCATATTATAGACAATATTGATCTTTTATTCGA
AGATAAGATATCGGATACAGATATGGGTGGAATTATTAATTCAGTTGTAT
CGTTAATTTTGTTAATGCAACCGGATATTCAAACAGACTTTGTGGAACCA
TTTTGCAAAGTTCTCGAAAAGAAGATGTGCAACAACGAGAAAAAAGAAAG
AATTAAAAGATTTGTGCTTAATTCATTGTTTCTTGGATTAACCAAAAATG
AGACAAAAATAAAAACTTATGAAAGTTTATTAAACGCTGAAATTAATAGT
GATAAAAAACATTTAATCAACATCAACTTAAAGGAAATATCAGGCTGGTT
GAAAGAATGGCAATGCAATCAAGAACAGATTCAAAACATTTTAAGCAAAC
TTAATAGAATTTTTATTGAACGTCACGAAGAAAGGTATTCAACAGAGAGT
ATGATGATGTTGTTAAGTTCATTTACCGACGAACGAGCTGCAAGTGCTCG
AGATGATGCGATTAGATGTATTGTTGCAGCATTGCAAGATCCTAATGCTT
TGACAATGGATCAAATTCTTGAGTTAAAGCCCGTTCAATGTTTAGCCGGT
GAACCAATTCATGATCTGTTAACGATATTTGTGAGTGGAACAATTAACGA
CTATAGAAAATTCCTTGACGCTTACCCGGATTTCATGGACAAATATGGAT
TAGATAAAGAAGCTTGTATGACAAAAATCCGAATACTCTCCTTGATGACT
TTGGCTGCCGGTGATACAACTGAATTGTCTTACAATACCATCCAAAAAGA
ATTACAATTGGAAAGAGAAGATTTCGAAGCATTTGTCATTGAGGCTGTGA
GGCAGCAAGCAGTCACTTGCAAACTAGATCAACAAAATGAAAAAGTTCTA
ATTTCTGGAGCCGTGCCGCGCTCATTTGGTGCAGATCAATGGACAAAATT
ATACAAAGATTTGCAAATGTGGCAAAACAATTTCAAAATTATAATCGAAG
ATCTTCGAAAATTGAAATCTGATGCTCCAGTTTAATTATTATTGATCGAT
TTTTTGTTGATATATCTAATATAATA
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protein sequence of SMED30011661-orf-1

>SMED30011661-orf-1 ID=SMED30011661-orf-1|Name=SMED30011661-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=395bp
VAHLVLILLLFKNMSVSIFTETSDFIQVSEILQYFHDNERCLDVTIKEEE
WHDALNHIIDNIDLLFEDKISDTDMGGIINSVVSLILLMQPDIQTDFVEP
FCKVLEKKMCNNEKKERIKRFVLNSLFLGLTKNETKIKTYESLLNAEINS
DKKHLININLKEISGWLKEWQCNQEQIQNILSKLNRIFIERHEERYSTES
MMMLLSSFTDERAASARDDAIRCIVAALQDPNALTMDQILELKPVQCLAG
EPIHDLLTIFVSGTINDYRKFLDAYPDFMDKYGLDKEACMTKIRILSLMT
LAAGDTTELSYNTIQKELQLEREDFEAFVIEAVRQQAVTCKLDQQNEKVL
ISGAVPRSFGADQWTKLYKDLQMWQNNFKIIIEDLRKLKSDAPV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0001732formation of cytoplasmic translation initiation complex
GO:0002183cytoplasmic translational initiation
GO:0006412translation
GO:0006413translational initiation
Vocabulary: cellular component
TermDefinition
GO:0016282eukaryotic 43S preinitiation complex
GO:0033290eukaryotic 48S preinitiation complex
GO:0071541eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 282..372
e-value: 3.3E-7
score: 40.0
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 250..348
e-value: 1.3E-11
score: 44.9
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 191..354
score: 16.389
NoneNo IPR availableSMARTSM00753PINTcoord: 282..372
e-value: 3.3E-7
score: 40.0
NoneNo IPR availableGENE3DG3DSA:1.25.40.570coord: 196..362
e-value: 3.2E-30
score: 106.9
NoneNo IPR availablePANTHERPTHR15350:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Mcoord: 28..387
NoneNo IPR availablePANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 28..387
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.626