40S ribosomal protein S3

Overview
Name40S ribosomal protein S3
Smed IDSMED30011609
Length (bp)813
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 40S ribosomal protein S3 (SMED30011609) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S3 (SMED30011609) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S3 (SMED30011609) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S3 (SMED30011609) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30011609

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 17

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30011609h1SMcG0020880 SmedASXL_018667SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30011609h1SMcG0001619 Contig4820GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
pharynxSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30011609h1SMcG0020880 dd_Smed_v4_269_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30011609h1SMcG0020880 Contig4820GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Category 2 cellSMED30011609h1SMcG0020880 dd_Smed_v6_269_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011609h1SMcG0020880 dd_Smed_v6_269_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
pharynx progenitor cellSMED30011609h1SMcG0020880 dd_Smed_v6_269_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Human
Match: RPS3 (ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:10420])

HSP 1 Score: 327.02 bits (837), Expect = 3.391e-113
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Human
Match: RPS3 (ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:10420])

HSP 1 Score: 327.02 bits (837), Expect = 3.391e-113
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Human
Match: RPS3 (ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:10420])

HSP 1 Score: 327.02 bits (837), Expect = 3.391e-113
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Human
Match: RPS3 (ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:10420])

HSP 1 Score: 317.005 bits (811), Expect = 5.682e-109
Identity = 161/240 (67.08%), Postives = 186/240 (77.50%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDI----------------FCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V++                + EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 243
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Human
Match: RPS3 (ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:10420])

HSP 1 Score: 305.064 bits (780), Expect = 1.023e-104
Identity = 156/224 (69.64%), Postives = 177/224 (79.02%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E              L A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGS------------LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 215
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Celegans
Match: rps-3 (40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152])

HSP 1 Score: 305.064 bits (780), Expect = 5.860e-105
Identity = 147/229 (64.19%), Postives = 185/229 (80.79%), Query Frame = 2 
Query:   83 MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            M ++  ++K +K V  G+FKAEL+ F  KELAEDGYS VE+R+ P R E+II AT+TQNVLGE+GRR+KELT+V+QKRF   E  V+++ EK+ NRGL AVAQ ESLRYKL+GG+AVR+ACYGVLRFI+ESGA+G EV+VSGKLRGQRAK+MKF DGLMIHSG+PV DYI  AVRHV+LRQGV+GIKVKIM  +D  G+ GP+  LPD + I++P+ EV    P S++K
Sbjct:    1 MAANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHK 229
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Fly
Match: RpS3 (gene:FBgn0002622 transcript:FBtr0346349)

HSP 1 Score: 309.686 bits (792), Expect = 1.218e-106
Identity = 150/229 (65.50%), Postives = 184/229 (80.35%), Query Frame = 2 
Query:   83 MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            M ++  ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P+R EIII ATKTQ VLGEKGRR++ELTA++QKRF+     ++++ EK+  RGL A+AQAESLRYKL GG+AVR+ACYGVLR+I+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+P  DY++ A RHV LRQGVLGIKVK+M  +D   K+GPK+PLPD +S+++PK E    TP +E K
Sbjct:    1 MNANLPISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Fly
Match: RpS3 (gene:FBgn0002622 transcript:FBtr0084410)

HSP 1 Score: 309.686 bits (792), Expect = 1.218e-106
Identity = 150/229 (65.50%), Postives = 184/229 (80.35%), Query Frame = 2 
Query:   83 MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            M ++  ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P+R EIII ATKTQ VLGEKGRR++ELTA++QKRF+     ++++ EK+  RGL A+AQAESLRYKL GG+AVR+ACYGVLR+I+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+P  DY++ A RHV LRQGVLGIKVK+M  +D   K+GPK+PLPD +S+++PK E    TP +E K
Sbjct:    1 MNANLPISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Zebrafish
Match: rps3 (ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494])

HSP 1 Score: 327.02 bits (837), Expect = 2.579e-113
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK EV   TP SE K
Sbjct:    4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTPVSEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Zebrafish
Match: rps3 (ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494])

HSP 1 Score: 327.02 bits (837), Expect = 2.579e-113
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK EV   TP SE K
Sbjct:    4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTPVSEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Xenopus
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:394724])

HSP 1 Score: 325.865 bits (834), Expect = 1.007e-112
Identity = 160/224 (71.43%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Xenopus
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:394724])

HSP 1 Score: 317.39 bits (812), Expect = 2.002e-109
Identity = 155/216 (71.76%), Postives = 180/216 (83.33%), Query Frame = 2 
Query:  122 VRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    8 VADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISEQK 223
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Xenopus
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:394724])

HSP 1 Score: 317.39 bits (812), Expect = 2.294e-109
Identity = 155/216 (71.76%), Postives = 180/216 (83.33%), Query Frame = 2 
Query:  122 VRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:   11 VADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISEQK 226
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Xenopus
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:394724])

HSP 1 Score: 126.331 bits (316), Expect = 1.297e-35
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKAC 445
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RG+  +     L +   G +  +K  
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGVLGIKVKIMLPWDPSGKIGPKKPL 119

HSP 2 Score: 63.5438 bits (153), Expect = 5.960e-12
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 2 
Query:  623 QGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +GVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:   94 RGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISEQK 142
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Mouse
Match: Rps3 (ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:1350917])

HSP 1 Score: 325.479 bits (833), Expect = 8.465e-113
Identity = 160/224 (71.43%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Mouse
Match: Rps3 (ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:1350917])

HSP 1 Score: 253.832 bits (647), Expect = 2.762e-85
Identity = 126/176 (71.59%), Postives = 146/176 (82.95%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQ 625
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D A   +ELR 
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTA--GLELRN 177
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Mouse
Match: Rps3 (ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:1350917])

HSP 1 Score: 159.844 bits (403), Expect = 4.597e-49
Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRK 439
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
[Close]
BLAST of 40S ribosomal protein S3 vs. UniProt/SwissProt
Match: sp|Q0Z8U2|RS3_PIG (40S ribosomal protein S3 OS=Sus scrofa OX=9823 GN=RPS3 PE=1 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 1.629e-112
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. UniProt/SwissProt
Match: sp|P23396|RS3_HUMAN (40S ribosomal protein S3 OS=Homo sapiens OX=9606 GN=RPS3 PE=1 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 1.629e-112
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. UniProt/SwissProt
Match: sp|Q3T169|RS3_BOVIN (40S ribosomal protein S3 OS=Bos taurus OX=9913 GN=RPS3 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 1.629e-112
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. UniProt/SwissProt
Match: sp|P02350|RS31_XENLA (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 3.801e-112
Identity = 160/224 (71.43%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIVPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. UniProt/SwissProt
Match: sp|Q5R465|RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii OX=9601 GN=RPS3 PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 5.485e-112
Identity = 160/224 (71.43%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ E++  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. TrEMBL
Match: A0A3Q3VY84 (Ribosomal protein S3 OS=Mola mola OX=94237 PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 3.431e-111
Identity = 161/226 (71.24%), Postives = 187/226 (82.74%), Query Frame = 2 
Query:   92 SNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            + +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E P  TP SE K
Sbjct:    2 AAQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKVGPKKPLPDHVSIVEPKEETPPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. TrEMBL
Match: A0A0B7AZ66 (KH type-2 domain-containing protein (Fragment) OS=Arion vulgaris OX=1028688 GN=ORF151595 PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 3.814e-111
Identity = 158/226 (69.91%), Postives = 188/226 (83.19%), Query Frame = 2 
Query:   92 SNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            + ++SK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELT+V+QKRF   E  V+++ EK+  RGL A+AQ ESLRYKL+GG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF+DGLMIHSG+P+ DY+D AVRHV LRQGVLGIKVKIM   D TGK+GP+RPLPD +SI++PK EVP   P SE K
Sbjct:    5 ATQLSKKRKFVTDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFPEGTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGDPLNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPRRPLPDHVSIVEPKEEVPPAQPYSEAK 230
[Close]
BLAST of 40S ribosomal protein S3 vs. TrEMBL
Match: W5MH79 (Ribosomal protein S3 OS=Lepisosteus oculatus OX=7918 PE=3 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.792e-111
Identity = 162/226 (71.68%), Postives = 187/226 (82.74%), Query Frame = 2 
Query:   92 SNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            + +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D TGK+GPK+PLPD +SI++PK EV   TP SE K
Sbjct:    2 AAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPENSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEVLPTTPISEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. TrEMBL
Match: R7VKP0 (KH type-2 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_171942 PE=4 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.986e-110
Identity = 160/226 (70.80%), Postives = 188/226 (83.19%), Query Frame = 2 
Query:   92 SNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            + +ISK RK V +GVFKAEL+ FF +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELT+V+QKRF+  E  V+++ EK+  RGL A+AQAESLRYKL+GG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSGNP  DY+D AVRHV LRQGVLGI+VKIM   D TGK+GPKRPLPD +SI++PK E     P SE+K
Sbjct:    2 ATQISKKRKFVANGVFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVDKAVRHVLLRQGVLGIQVKIMLPWDPTGKIGPKRPLPDHVSIVEPKDERAPEHPYSEHK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. TrEMBL
Match: A0A3Q3KL54 (Ribosomal protein S3 OS=Monopterus albus OX=43700 PE=3 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 2.176e-110
Identity = 161/224 (71.88%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK EV   TP SE K
Sbjct:    4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVLPTTPMSEQK 227
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Cavefish
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:103028699])

HSP 1 Score: 326.25 bits (835), Expect = 3.499e-113
Identity = 160/224 (71.43%), Postives = 186/224 (83.04%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E+   TP SE K
Sbjct:    4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPVSEQK 227
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BLAST of 40S ribosomal protein S3 vs. Ensembl Cavefish
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:103028699])

HSP 1 Score: 115.931 bits (289), Expect = 7.047e-32
Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDI 346
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V++
Sbjct:    4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVEV 86
[Close]
BLAST of 40S ribosomal protein S3 vs. Ensembl Sea Lamprey
Match: rps3 (ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494])

HSP 1 Score: 292.352 bits (747), Expect = 4.172e-101
Identity = 140/192 (72.92%), Postives = 163/192 (84.90%), Query Frame = 2 
Query:  116 KVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPK 691
            K V DGVFKAE++ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELT+V+QKRF+  E  V+++ EK+ NRGL A+AQ ESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D A+RHV LRQGVLGIKVKIM   D TGK+GP+
Sbjct:    3 KFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGVLGIKVKIMLPWDTTGKMGPR 194
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BLAST of 40S ribosomal protein S3 vs. Ensembl Yeast
Match: RPS3 (Protein component of the small (40S) ribosomal subunit; has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; nascent Rps3p is bound by specific chaperone Yar1p during translation; homologous to mammalian ribosomal protein S3 and bacterial S3 [Source:SGD;Acc:S000005122])

HSP 1 Score: 270.781 bits (691), Expect = 3.576e-92
Identity = 131/218 (60.09%), Postives = 171/218 (78.44%), Query Frame = 2 
Query:  101 ISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTP 754
            ISK RK+V DGVF AEL+ FF +ELAE+GYS VE+R  P + E+II AT+TQ+VLGE GRR+ ELT ++QKRF      + ++ E++ +RGLSAVAQAES+++KLL G+A+R+A YGV+R+++ESGAKG EVVVSGKLR  RAK+MKF+DG +IHSG PV D+ID A RHV +RQGVLGIKVKIM+      + GPK  LPD ++I++PK E PI+ P
Sbjct:    5 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMR-DPAKSRTGPK-ALPDAVTIIEPKEEEPILAP 220
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BLAST of 40S ribosomal protein S3 vs. Ensembl Nematostella
Match: EDO49796 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFX1])

HSP 1 Score: 317.39 bits (812), Expect = 4.103e-110
Identity = 155/226 (68.58%), Postives = 183/226 (80.97%), Query Frame = 2 
Query:   92 SNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            + +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELT+V+QKRF   E  V+++ EK+  RGL A+AQ ESLRYKL+GG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLM+H+G P   Y+D AVRHV LRQGVLGIKVKIM   D TGK GPK+PLPD +SI++PK EV    P SE+K
Sbjct:    2 AAQISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQGVLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQPTSEHK 227
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BLAST of 40S ribosomal protein S3 vs. Ensembl Medaka
Match: rps3 (ribosomal protein S3 [Source:NCBI gene;Acc:101166236])

HSP 1 Score: 322.398 bits (825), Expect = 1.357e-111
Identity = 159/224 (70.98%), Postives = 184/224 (82.14%), Query Frame = 2 
Query:   98 KISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            +ISK RK V DG+FKAEL+ F  +ELAEDGYS VE+R  P R EIII AT+TQNVLGEKGRR++ELTAV+QKRF   E  V+++ EK+  RGL A+AQAESLRYKLLGG+AVR+ACYGVLRFI+ESGAKG EVVVSGKLRGQRAKSMKF DGLMIHSG+PV  Y+D AVRHV LRQGVLGIKVKIM   D +GK+GPK+PLPD +SI++PK E     P SE K
Sbjct:    4 QISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTAPISEQK 227
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BLAST of 40S ribosomal protein S3 vs. Planmine SMEST
Match: SMESG000016955.1 (SMESG000016955.1)

HSP 1 Score: 474.552 bits (1220), Expect = 4.272e-172
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 2 
Query:   83 MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENKPLSAN 784
            MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENKPLSAN
Sbjct:    1 MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENKPLSAN 234
[Close]
BLAST of 40S ribosomal protein S3 vs. Planmine SMEST
Match: SMESG000079237.1 (SMESG000079237.1)

HSP 1 Score: 288.886 bits (738), Expect = 1.032e-98
Identity = 142/218 (65.14%), Postives = 174/218 (79.82%), Query Frame = 2 
Query:  116 KVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEIIISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSAVAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAKSMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKLGPKRPLPDFISILQPKVEVPIVTPRSENK 769
            K++ DGV KAEL++FFQ EL+E GY+ V+LR APNRYEII+  TKTQ  LG KG+RV+ELTA+L KRFD  EK + I+ EK+ NRGLSA AQAES+++KLL GVAVRKA  GVLRF +E+GA+G EV++SGK+RGQRAK+MKF+ GLMIHSG P  D+++ A+R VELRQGVLG+KVKIMK  D TGKLGP + +PD I I  PK E  I TP SENK
Sbjct:    9 KIIEDGVIKAELNKFFQNELSECGYAGVDLRCAPNRYEIILRVTKTQEALGNKGQRVRELTAILCKRFDWEEKNLSIYIEKVENRGLSAAAQAESVKFKLLEGVAVRKAASGVLRFAMEAGAQGVEVIISGKIRGQRAKAMKFTTGLMIHSGQPSKDFVEQAIRSVELRQGVLGVKVKIMKGQDPTGKLGPVQQIPDKIIINAPKEEKFIETPYSENK 226
The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPS33.391e-11371.88ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS33.391e-11371.88ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS33.391e-11371.88ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS35.682e-10967.08ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS31.023e-10469.64ribosomal protein S3 [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps-35.860e-10564.1940S ribosomal protein S3 [Source:UniProtKB/Swiss-... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
RpS31.218e-10665.50gene:FBgn0002622 transcript:FBtr0346349[more]
RpS31.218e-10665.50gene:FBgn0002622 transcript:FBtr0084410[more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rps32.579e-11371.88ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030... [more]
rps32.579e-11371.88ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
rps31.007e-11271.43ribosomal protein S3 [Source:NCBI gene;Acc:394724][more]
rps32.002e-10971.76ribosomal protein S3 [Source:NCBI gene;Acc:394724][more]
rps32.294e-10971.76ribosomal protein S3 [Source:NCBI gene;Acc:394724][more]
rps31.297e-3553.45ribosomal protein S3 [Source:NCBI gene;Acc:394724][more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Rps38.465e-11371.43ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:13... [more]
Rps32.762e-8571.59ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:13... [more]
Rps34.597e-4967.54ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:13... [more]
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BLAST of 40S ribosomal protein S3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q0Z8U2|RS3_PIG1.629e-11271.8840S ribosomal protein S3 OS=Sus scrofa OX=9823 GN=... [more]
sp|P23396|RS3_HUMAN1.629e-11271.8840S ribosomal protein S3 OS=Homo sapiens OX=9606 G... [more]
sp|Q3T169|RS3_BOVIN1.629e-11271.8840S ribosomal protein S3 OS=Bos taurus OX=9913 GN=... [more]
sp|P02350|RS31_XENLA3.801e-11271.4340S ribosomal protein S3-A OS=Xenopus laevis OX=83... [more]
sp|Q5R465|RS3_PONAB5.485e-11271.4340S ribosomal protein S3 OS=Pongo abelii OX=9601 G... [more]
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BLAST of 40S ribosomal protein S3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3Q3VY843.431e-11171.24Ribosomal protein S3 OS=Mola mola OX=94237 PE=3 SV... [more]
A0A0B7AZ663.814e-11169.91KH type-2 domain-containing protein (Fragment) OS=... [more]
W5MH798.792e-11171.68Ribosomal protein S3 OS=Lepisosteus oculatus OX=79... [more]
R7VKP01.986e-11070.80KH type-2 domain-containing protein OS=Capitella t... [more]
A0A3Q3KL542.176e-11071.88Ribosomal protein S3 OS=Monopterus albus OX=43700 ... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rps33.499e-11371.43ribosomal protein S3 [Source:NCBI gene;Acc:1030286... [more]
rps37.047e-3266.27ribosomal protein S3 [Source:NCBI gene;Acc:1030286... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps34.172e-10172.92ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
RPS33.576e-9260.09Protein component of the small (40S) ribosomal sub... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO497964.103e-11068.58Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 40S ribosomal protein S3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps31.357e-11170.98ribosomal protein S3 [Source:NCBI gene;Acc:1011662... [more]
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BLAST of 40S ribosomal protein S3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000016955.14.272e-172100.00SMESG000016955.1[more]
SMESG000079237.11.032e-9865.14SMESG000079237.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011609 ID=SMED30011609|Name=40S ribosomal protein S3|organism=Schmidtea mediterranea sexual|type=transcript|length=813bp
AATTTTGTTAACATTAACATTTGTTTAAACTAATAATATAATTGGATTTC
ATAAATATTCAAAAGAAATTGTTTATCGTCAAATGTTTAGTTCTAACAAA
ATATCAAAGACCAGAAAAGTCGTTAGAGATGGGGTTTTTAAAGCCGAATT
AGATCGATTTTTTCAGAAAGAATTAGCTGAAGATGGCTATTCTAATGTCG
AGTTACGAGCTGCTCCAAATAGATATGAAATAATCATTAGTGCCACAAAG
ACACAAAATGTCCTAGGTGAAAAGGGTCGAAGAGTTAAAGAACTTACTGC
TGTTCTTCAGAAAAGATTTGATTTGAATGAAAAAGAAGTGGATATATTCT
GTGAAAAAATGGTAAATCGAGGATTGAGTGCAGTTGCACAAGCAGAGTCT
CTTAGATACAAATTGCTTGGTGGTGTTGCTGTTCGTAAAGCATGTTATGG
AGTTCTTCGATTTATTCTTGAAAGTGGAGCTAAAGGTGCAGAGGTTGTCG
TATCTGGAAAATTAAGAGGCCAGCGAGCAAAATCTATGAAGTTTAGCGAT
GGACTTATGATCCACAGTGGCAATCCAGTTATTGATTATATTGATGTGGC
TGTTCGTCATGTAGAACTTCGACAAGGTGTTCTTGGTATTAAAGTTAAAA
TAATGAAATGTCATGATATTACTGGAAAACTTGGACCCAAGCGTCCTCTA
CCGGACTTTATAAGTATTTTGCAACCAAAGGTAGAAGTTCCAATAGTTAC
CCCTCGAAGTGAAAATAAGCCTTTAAGTGCTAATTAAAGTTTTAATAAAA
ATTTGTGGATTTG
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protein sequence of SMED30011609-orf-1

>SMED30011609-orf-1 ID=SMED30011609-orf-1|Name=SMED30011609-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=235bp
MFSSNKISKTRKVVRDGVFKAELDRFFQKELAEDGYSNVELRAAPNRYEI
IISATKTQNVLGEKGRRVKELTAVLQKRFDLNEKEVDIFCEKMVNRGLSA
VAQAESLRYKLLGGVAVRKACYGVLRFILESGAKGAEVVVSGKLRGQRAK
SMKFSDGLMIHSGNPVIDYIDVAVRHVELRQGVLGIKVKIMKCHDITGKL
GPKRPLPDFISILQPKVEVPIVTPRSENKPLSAN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000028Category 2 cell
PLANA:0000110pharynx progenitor cell
PLANA:0000429neoblast
PLANA:0002032epidermal cell
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR036419Ribosomal_S3_C_sf
IPR005703Ribosomal_S3_euk/arc
IPR004044KH_dom_type_2
IPR015946KH_dom-like_a/b
IPR001351Ribosomal_S3_C
IPR018280Ribosomal_S3_CS
IPR009019KH_sf_prok-type
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
GO:0003677DNA binding
GO:0003684damaged DNA binding
GO:0003906DNA-(apurinic or apyrimidinic site) lyase activity
GO:0008534oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0016829lyase activity
Vocabulary: biological process
TermDefinition
GO:0006412translation
GO:0006281DNA repair
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0006417regulation of translation
GO:0006915apoptotic process
GO:0006974cellular response to DNA damage stimulus
GO:0007049cell cycle
GO:0007067mitotic nuclear division
GO:0051301cell division
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
GO:0005634nucleus
GO:0005730nucleolus
GO:0005737cytoplasm
GO:0005739mitochondrion
GO:0005743mitochondrial inner membrane
GO:0005819spindle
GO:0005856cytoskeleton
GO:0015935small ribosomal subunit
GO:0016020membrane
GO:0022627cytosolic small ribosomal subunit
GO:0030529intracellular ribonucleoprotein complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036419Ribosomal protein S3, C-terminal domain superfamilyGENE3DG3DSA:3.30.1140.32coord: 95..233
e-value: 1.6E-60
score: 204.8
IPR036419Ribosomal protein S3, C-terminal domain superfamilySUPERFAMILYSSF54821Ribosomal protein S3 C-terminal domaincoord: 95..192
IPR001351Ribosomal protein S3, C-terminalPFAMPF00189Ribosomal_S3_Ccoord: 108..190
e-value: 1.8E-21
score: 76.4
IPR005703Ribosomal protein S3, eukaryotic/archaealTIGRFAMTIGR01008TIGR01008coord: 10..212
e-value: 1.3E-62
score: 209.0
IPR015946K homology domain-like, alpha/betaGENE3DG3DSA:3.30.300.20coord: 2..93
e-value: 6.3E-37
score: 127.4
IPR004044K Homology domain, type 2PFAMPF07650KH_2coord: 22..93
e-value: 2.7E-10
score: 39.9
IPR004044K Homology domain, type 2PROSITEPS50823KH_TYPE_2coord: 23..94
score: 10.381
NoneNo IPR availablePANTHERPTHR1176030S/40S RIBOSOMAL PROTEIN S3coord: 5..229
NoneNo IPR availablePANTHERPTHR11760:SF3240S RIBOSOMAL PROTEIN S3coord: 5..229
NoneNo IPR availableCDDcd0241340S_S3_KHcoord: 17..97
e-value: 1.14136E-35
score: 119.634
IPR018280Ribosomal protein S3, conserved sitePROSITEPS00548RIBOSOMAL_S3coord: 149..185
IPR009019K homology domain superfamily, prokaryotic typeSUPERFAMILYSSF54814Prokaryotic type KH domain (KH-domain type II)coord: 15..101