PDZ and LIM domain protein

Overview
NamePDZ and LIM domain protein
Smed IDSMED30011528
Length (bp)1076
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of PDZ and LIM domain protein (SMED30011528) t-SNE clustered cells

Violin plots show distribution of expression levels for PDZ and LIM domain protein (SMED30011528) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of PDZ and LIM domain protein (SMED30011528) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for PDZ and LIM domain protein (SMED30011528) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30011528

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30011528SMESG000015397.1 dd_Smed_v4_4618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30011528SMESG000015397.1 dd_Smed_v4_4618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30011528SMESG000015397.1 Contig39235newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30011528SMESG000015397.1 Contig39235uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Human
Match: PDLIM3 (PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767])

HSP 1 Score: 104.375 bits (259), Expect = 3.405e-25
Identity = 89/299 (29.77%), Postives = 125/299 (41.81%), Query Frame = 3 
Query:  123 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFV---DKISPLITQDQSGRVKKVMHNQFNSP------------MGLYSD-SNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMY 959
            M QT+I+         PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  +A+++   I RG      +W P V    K  P               K+N  +  ++ N F    N  P PFV       P  +      V +++H+  N P             G+  D S+       ++RA     +  SG  +  P    C  CG  I G  V+   +   HP C  C  C + LK  GYF+I  +LYC+ H +   KP      VT+Y
Sbjct:    1 MPQTVILP-----GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAAHQLCLKIDRGET---HLWSPQVSEDGKAHP--------------FKINLESEPQDGNYFEHKHNIRPKPFVIPGRSSEPTASVPPESDVYRMLHDNRNEPTQPRQSGSFRVLQGMVDDGSDDRPAGTRSVRAPVTKVHGGSGGAQRMP---LCDKCGSGIVGAVVKARDKY-RHPECFVCADCNLNLKQKGYFFIEGELYCETHARARTKPPEGYDTVTLY 273
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Human
Match: PDLIM3 (PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767])

HSP 1 Score: 92.0485 bits (227), Expect = 1.972e-20
Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 3 
Query:  123 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSS 746
            M QT+I+         PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  +A+++   I RG      +W P V    K  P +                 +N   E   F  + +    +  P +        ++V+   +NSP+GLYS SN+    +  +R    +S         PP S
Sbjct:    1 MPQTVILP-----GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAAHQLCLKIDRGET---HLWSPQVSEDGKAHPFK-----------------INLESEPQEFKPIGTAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSSPQNEPTASVPPES 183
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Human
Match: PDLIM1 (PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067])

HSP 1 Score: 88.9669 bits (219), Expect = 2.653e-19
Identity = 63/207 (30.43%), Postives = 92/207 (44.44%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESG----NIKSPPSSMYCGSCGEIIK 779
            PWGFRL GG D   P+ I ++  GS A  A L   D +  I+   T  MTH +A+  I    + +T T++R  +   K+W P V    K  P               KMN  +  +E      + S       P      S    +V+ NQ+N+P GLYS  N+S+ FNN + +   AS +E+     +   PPSS+      E+ K
Sbjct:   13 PWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEH---KVWSPLVTEEGKRHP--------------YKMNLASEPQE---VLHIGSAHNRSAMPFTASPASSTTARVITNQYNNPAGLYSSENISN-FNNALESKTAASGVEANSRPLDHAQPPSSLVIDKESEVYK 198
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Human
Match: PDLIM3 (PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767])

HSP 1 Score: 87.4261 bits (215), Expect = 1.463e-18
Identity = 67/235 (28.51%), Postives = 92/235 (39.15%), Query Frame = 3 
Query:  123 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFV----------------------------------------DKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAA 695
            M QT+I+         PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  +A+++   I RG      +W P V    K  P               K+N  +  ++ N F    N  P PFV                                         K++P I  +      K++H QFN+PM LYSD N+  T    +  A
Sbjct:    1 MPQTVILP-----GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAAHQLCLKIDRGET---HLWSPQVSEDGKAHP--------------FKINLESEPQDGNYFEHKHNIRPKPFVIPGRSSGCSTPSGIDCGSGRSTPSSVSTVSTICPGDLKVAAKLAPNIPLEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTA 213
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Human
Match: PDLIM3 (PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767])

HSP 1 Score: 74.3294 bits (181), Expect = 1.166e-15
Identity = 46/133 (34.59%), Postives = 61/133 (45.86%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFV 557
            PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  +A+++   I RG      +W P V    K  P               K+N  +  ++ N F    N  P PFV
Sbjct:    8 PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAAHQLCLKIDRGET---HLWSPQVSEDGKAHP--------------FKINLESEPQDGNYFEHKHNIRPKPFV 123
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 72.0182 bits (175), Expect = 1.107e-13
Identity = 80/309 (25.89%), Postives = 126/309 (40.78%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRG-SNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTF---------NNTIRAA---------------NLASNLESG----------NIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPG-PDMYP 947
            + + + + RSD   PWGF +    D    + I+ ++ GS+A+ AGL+  D V  +     + +        ++ +  +I   ++R  S    +IW+P V  +    P ++Q      T   + +   +  R    FN    PF          DQ     +V H Q+NSP+G+YSD + +  +         N+  RAA                L    E G          N  +P     C  C   I GV  R  G+  +H  CL C  CG  L+NVG+ +I ++ YCD+H  Q    G P M P
Sbjct:    2 ERVTVRMARSDRRTPWGFGVTEAPD--GAVLIVNVIGGSLADRAGLRNGDVVDRLE--DLDNLDINAVDRLLVTAHEKIELIVTRQPSGAATRIWRPEVTENTG--PGQDQ------TPYRVNLQHSSDTRPPQGFNNSALPF--------ETDQ-----RVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNSGARAAAQRQDEPAYLRSETLRLLKEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKN-LHGDCLSCATCGNSLRNVGHHFIEDKFYCDIHGTQRKHGGRPGMDP 284
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 71.633 bits (174), Expect = 2.264e-13
Identity = 80/314 (25.48%), Postives = 130/314 (41.40%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRG-SNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTF---------NNTIRAA---------------NLASNLESGNIKSPPSSM----------YCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPG-PDMYPVTMYK 962
            + + + + RSD   PWGF +    D    + I+ ++ GS+A+ AGL+  D V  +     + +        ++ +  +I   ++R  S    +IW+P V  +    P ++Q +P+ V      +   +  R    FN    PF          DQ     +V H Q+NSP+G+YSD + +  +         N+  RAA                L    E G+     +++           C  C   I GV  R  G+  +H  CL C  CG  L+NVG+ +I ++ YCD+H  Q    G P M P    K
Sbjct:    2 ERVTVRMARSDRRTPWGFGVTEAPD--GAVLIVNVIGGSLADRAGLRNGDVVDRL--EDLDNLDINAVDRLLVTAHEKIELIVTRQPSGAATRIWRPEVTENTG--PGQDQ-TPYRV-----NLQHSSDTRPPQGFNNSALPF--------ETDQ-----RVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNSGARAAAQRQDEPAYLRSETLRLLKEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGK-NLHGDCLSCATCGNSLRNVGHHFIEDKFYCDIHGTQRKHGGRPGMDPNIFVK 289
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 71.2478 bits (173), Expect = 2.751e-13
Identity = 80/314 (25.48%), Postives = 130/314 (41.40%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRG-SNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTF---------NNTIRAA---------------NLASNLESGNIKSPPSSM----------YCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPG-PDMYPVTMYK 962
            + + + + RSD   PWGF +    D    + I+ ++ GS+A+ AGL+  D V  +     + +        ++ +  +I   ++R  S    +IW+P V  +    P ++Q +P+ V      +   +  R    FN    PF          DQ     +V H Q+NSP+G+YSD + +  +         N+  RAA                L    E G+     +++           C  C   I GV  R  G+  +H  CL C  CG  L+NVG+ +I ++ YCD+H  Q    G P M P    K
Sbjct:    2 ERVTVRMARSDRRTPWGFGVTEAPD--GAVLIVNVIGGSLADRAGLRNGDVVDRLE--DLDNLDINAVDRLLVTAHEKIELIVTRQPSGAATRIWRPEVTENTG--PGQDQ-TPYRV-----NLQHSSDTRPPQGFNNSALPF--------ETDQ-----RVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNSGARAAAQRQDEPAYLRSETLRLLKEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGK-NLHGDCLSCATCGNSLRNVGHHFIEDKFYCDIHGTQRKHGGRPGMDPNIFVK 289
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 70.8626 bits (172), Expect = 4.515e-13
Identity = 83/314 (26.43%), Postives = 129/314 (41.08%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRG-SNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTF---------NNTIRAA---------------NLASNLESG----------NIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPG-PDMYPVTMYK 962
            + + + + RSD   PWGF +    D GA + I+ ++ GS+A+ AGL+  D V  +     + +        ++ +  +I   ++R  S    +IW+P V  +    P ++Q      T   + +   +  R    FN    PF          DQ     +V H Q+NSP+G+YSD + +  +         N+  RAA                L    E G          N  +P     C  C   I GV  R  G+  +H  CL C  CG  L+NVG+ +I ++ YCD+H  Q    G P M P    K
Sbjct:    2 ERVTVRMARSDRRTPWGFGVTEAPD-GA-VLIVNVIGGSLADRAGLRNGDVVDRLE--DLDNLDINAVDRLLVTAHEKIELIVTRQPSGAATRIWRPEVTENTG--PGQDQ------TPYRVNLQHSSDTRPPQGFNNSALPF--------ETDQ-----RVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNSGARAAAQRQDEPAYLRSETLRLLKEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKN-LHGDCLSCATCGNSLRNVGHHFIEDKFYCDIHGTQRKHGGRPGMDPNIFVK 289
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Celegans
Match: C45G9.7 (pep chromosome:WBcel235:III:5046170:5047161:-1 gene:WBGene00016678.1 transcript:C45G9.7.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C45G9.7)

HSP 1 Score: 45.0542 bits (105), Expect = 8.857e-6
Identity = 27/92 (29.35%), Postives = 49/92 (53.26%), Query Frame = 3 
Query:  162 TSIPWGFRLEGGVDMG---APIR-------IMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKI 407
             +I  GF++ GG+D     AP +       I  + SGS A+ AGL+  D +L +N +    MTH++A ++ I+ +  +   ++R   PP+ +
Sbjct:   33 VTIRVGFKIGGGIDQDPTKAPFKYPDSGVYITNVESGSPADVAGLRKHDKILQVNGADFTMMTHDRA-VKFIKQSKVLHMLVARADLPPVSL 123
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0329910)

HSP 1 Score: 118.627 bits (296), Expect = 2.926e-31
Identity = 75/222 (33.78%), Postives = 113/222 (50.90%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVR 794
            Q L I L R D   PWGFRL+GG D   P+ + K+ +GS++E AGLQP D V+ IN      + H+ A+  ++RS N    T+ RG +     W+P V  +  + P  N P    VTKTSL   Q + +     +N    PF        +    G VK +++ Q+N+P+G+YSD +++ T   + +A  LA  +   N K      Y G   E++K  F+R
Sbjct:    5 QLLQIKLSRFDAQ-PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGS----TWRPHVTPTGNV-PQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF--------SNGGDGGVKSIVNKQYNTPVGIYSDESIAETL--SAQAEVLAGGVLGVNFKKNEKE-YQGDRSEVLK--FLR 207
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0302163)

HSP 1 Score: 117.857 bits (294), Expect = 2.706e-29
Identity = 75/222 (33.78%), Postives = 113/222 (50.90%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVR 794
            Q L I L R D   PWGFRL+GG D   P+ + K+ +GS++E AGLQP D V+ IN      + H+ A+  ++RS N    T+ RG +     W+P V  +  + P  N P    VTKTSL   Q + +     +N    PF        +    G VK +++ Q+N+P+G+YSD +++ T   + +A  LA  +   N K      Y G   E++K  F+R
Sbjct:    5 QLLQIKLSRFDAQ-PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGS----TWRPHVTPTGNV-PQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF--------SNGGDGGVKSIVNKQYNTPVGIYSDESIAETL--SAQAEVLAGGVLGVNFKK-NEKEYQGDRSEVLK--FLR 207
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0392918)

HSP 1 Score: 117.857 bits (294), Expect = 2.706e-29
Identity = 75/222 (33.78%), Postives = 113/222 (50.90%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVR 794
            Q L I L R D   PWGFRL+GG D   P+ + K+ +GS++E AGLQP D V+ IN      + H+ A+  ++RS N    T+ RG +     W+P V  +  + P  N P    VTKTSL   Q + +     +N    PF        +    G VK +++ Q+N+P+G+YSD +++ T   + +A  LA  +   N K      Y G   E++K  F+R
Sbjct:    5 QLLQIKLSRFDAQ-PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGS----TWRPHVTPTGNV-PQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF--------SNGGDGGVKSIVNKQYNTPVGIYSDESIAETL--SAQAEVLAGGVLGVNFKK-NEKEYQGDRSEVLK--FLR 207
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0329909)

HSP 1 Score: 117.472 bits (293), Expect = 6.687e-29
Identity = 75/222 (33.78%), Postives = 113/222 (50.90%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVR 794
            Q L I L R D   PWGFRL+GG D   P+ + K+ +GS++E AGLQP D V+ IN      + H+ A+  ++RS N    T+ RG +     W+P V  +  + P  N P    VTKTSL   Q + +     +N    PF        +    G VK +++ Q+N+P+G+YSD +++ T   + +A  LA  +   N K      Y G   E++K  F+R
Sbjct:    5 QLLQIKLSRFDAQ-PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGS----TWRPHVTPTGNV-PQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF--------SNGGDGGVKSIVNKQYNTPVGIYSDESIAETL--SAQAEVLAGGVLGVNFKK-NEKEYQGDRSEVLK--FLR 207
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0329915)

HSP 1 Score: 117.472 bits (293), Expect = 1.418e-28
Identity = 75/222 (33.78%), Postives = 113/222 (50.90%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVR 794
            Q L I L R D   PWGFRL+GG D   P+ + K+ +GS++E AGLQP D V+ IN      + H+ A+  ++RS N    T+ RG +     W+P V  +  + P  N P    VTKTSL   Q + +     +N    PF        +    G VK +++ Q+N+P+G+YSD +++ T   + +A  LA  +   N K      Y G   E++K  F+R
Sbjct:    5 QLLQIKLSRFDAQ-PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGS----TWRPHVTPTGNV-PQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF--------SNGGDGGVKSIVNKQYNTPVGIYSDESIAETL--SAQAEVLAGGVLGVNFKK-NEKEYQGDRSEVLK--FLR 207
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Zebrafish
Match: pdlim3b (PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104])

HSP 1 Score: 91.2781 bits (225), Expect = 2.121e-20
Identity = 64/203 (31.53%), Postives = 94/203 (46.31%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPF--VDKISPLITQDQSGRVKKVMHN-------QFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPP 740
            D   PWGFRL GG D   P+ I ++  GS A    L P D +L I   +T+ MTH +A+  I  S N++   I R   P  KIW P V+   K+ P           K +L+  + +     + FN  P PF    + S   +Q   G V ++          Q+NSP+ LYS  NVS    NT++ A +++ +   +  S P
Sbjct:    5 DGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILSIQGVSTDGMTHAEAQNNIKDSTNQLFLKIER---PETKIWSPQVIEEGKVNP----------FKINLEAEKQDIDYFEHKFNVRPKPFTSASQRSDSTSQTLMGNVAQMAGTPSTAHSVQYNSPVALYSADNVS----NTLQQAQMSTVVRQASPSSKP 190
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Zebrafish
Match: pdlim3b (PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104])

HSP 1 Score: 90.5077 bits (223), Expect = 4.650e-20
Identity = 58/182 (31.87%), Postives = 82/182 (45.05%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            D   PWGFRL GG D   P+ I ++  GS A    L P D +L I   +T+ MTH +A+  I  S N++   I R   P  KIW P V+   K+ P               K+N    ++EY       N    PFV   S     D++    +V+ + +N+P+GLYS  N+       IR 
Sbjct:    8 DGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILSIQGVSTDGMTHAEAQNNIKDSTNQLFLKIER---PETKIWSPQVIEEGKVNP--------------FKINLEAEKQEYKPIGTGHNRRAQPFVAAAS---LDDKT----QVVSSTYNTPIGLYSQDNIQDALQGQIRG 165
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Zebrafish
Match: pdlim3b (PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104])

HSP 1 Score: 90.5077 bits (223), Expect = 4.650e-20
Identity = 58/182 (31.87%), Postives = 82/182 (45.05%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            D   PWGFRL GG D   P+ I ++  GS A    L P D +L I   +T+ MTH +A+  I  S N++   I R   P  KIW P V+   K+ P               K+N    ++EY       N    PFV   S     D++    +V+ + +N+P+GLYS  N+       IR 
Sbjct:    8 DGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILSIQGVSTDGMTHAEAQNNIKDSTNQLFLKIER---PETKIWSPQVIEEGKVNP--------------FKINLEAEKQEYKPIGTGHNRRAQPFVAAAS---LDDKT----QVVSSTYNTPIGLYSQDNIQDALQGQIRG 165
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Zebrafish
Match: pdlim3a (PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1])

HSP 1 Score: 89.3521 bits (220), Expect = 9.045e-20
Identity = 83/324 (25.62%), Postives = 128/324 (39.51%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTF--------NNTIRAANLASNLE----------------------SGNIKSPPSSMYC-GSCGEIIK------------------------------GVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKP--GPDM 941
            D   PWGFRL GG D   P+ + KI  GS A    L P D +L I+  + E + H +A+  I  ++ ++T T+ R   P  K+W                 SP++      KMN    R+E+    A  +    + SP +        ++V+   +NSP+GLYS  N+            +N   +    SN+E                      SG+ K+  S M   G+C  +I+                              G  V+V  +   HP C  C +C   LK  GY++I+++LYC+ H     KP   PD+
Sbjct:    8 DGPAPWGFRLIGGRDFSQPLTVAKISPGSKASTVNLSPGDIILSIDGVSAENLMHSEAQTLIKDASYQLTLTVER---PETKLW-----------------SPNMTEDNPFKMNLEAERQEHRPIGAGHN---RRASPFVAAANIDETRQVVSPTYNSPIGLYSSGNIQDALQGQLKGLIHNKAESPRKLSNIEDSDVYRMLQKNQEEDEAHEPRQSGSFKALQSFMNSEGTCPLVIRKVHAPMSKPSAPSGNLHKLPMCDKCGNGIVGTVVKVQDKF-RHPDCFVCTECEENLKQKGYYFIDDELYCESHAHARAKPPESPDL 307
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Zebrafish
Match: pdlim3a (PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1])

HSP 1 Score: 83.5741 bits (205), Expect = 1.162e-17
Identity = 50/178 (28.09%), Postives = 79/178 (44.38%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            D   PWGFRL GG D   P+ + KI  GS A    L P D +L I+  + E + H +A+  I  ++ ++T T+ R   P  K+W                 SP++      KMN    R+E+    A  +    + SP +        ++V+   +NSP+GLYS  N+       ++ 
Sbjct:    8 DGPAPWGFRLIGGRDFSQPLTVAKISPGSKASTVNLSPGDIILSIDGVSAENLMHSEAQTLIKDASYQLTLTVER---PETKLW-----------------SPNMTEDNPFKMNLEAERQEHRPIGAGHN---RRASPFVAAANIDETRQVVSPTYNSPIGLYSSGNIQDALQGQLKG 162
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Xenopus
Match: foxi4.2 (forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GENE-487658])

HSP 1 Score: 99.3673 bits (246), Expect = 1.880e-23
Identity = 77/281 (27.40%), Postives = 117/281 (41.64%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFV------DKISPLITQDQSGRVKKVMHNQFNSP------------MGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMY 959
            PWGFRL GG+D   P+ I +I  GS +  A L P D +L I+   TE MTH +A+  I  + +++   I R      +IW P V    K  P           K +L+    +     +  N  P PF+      D + P + Q     V K++H+    P              +  D         ++RA     +  +  ++  P    C  CG  I G  V+   ++  HP C  C  C + LK  GYF++  QLYC+ H +   +P      VT+Y
Sbjct:   12 PWGFRLTGGIDFNQPLIISRITPGSKSSLANLCPGDVILAIDGFGTENMTHAEAQDRIKAATDQLCLKIERAET---RIWSPQVCEDGKAHP----------FKINLEAEPQDLGYFEHKHNIRPKPFILPGRSSDPVPPAVPQSD---VYKLLHDDTEHPNKPRQSGSFKILQDMVDDDPDRPAGTRSVRAPMTKPSTGAAAVQKVP---VCDRCGNGIVGTVVKAKDKL-RHPDCFVCTDCNLNLKQKGYFFVEGQLYCEAHARARMRPPEGYDAVTVY 272
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Xenopus
Match: foxi4.2 (forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GENE-487658])

HSP 1 Score: 94.7449 bits (234), Expect = 6.802e-22
Identity = 52/174 (29.89%), Postives = 80/174 (45.98%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            PWGFRL GG+D   P+ I +I  GS +  A L P D +L I+   TE MTH +A+  I  + +++   I R      +IW P V    K  P +                 +N   E   F  + +    +  P +     G  K+V+ + +N+P+GLYS SN+   F+  +R 
Sbjct:   12 PWGFRLTGGIDFNQPLIISRITPGSKSSLANLCPGDVILAIDGFGTENMTHAEAQDRIKAATDQLCLKIERAET---RIWSPQVCEDGKAHPFK-----------------INLEAEPQEFKPIGTAHNRRAQPFVAATNIGDKKQVVSSSYNTPIGLYSSSNIKDAFHGQMRG 165
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Xenopus
Match: foxi4.2 (forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GENE-487658])

HSP 1 Score: 95.1301 bits (235), Expect = 1.150e-21
Identity = 52/174 (29.89%), Postives = 80/174 (45.98%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            PWGFRL GG+D   P+ I +I  GS +  A L P D +L I+   TE MTH +A+  I  + +++   I R      +IW P V    K  P +                 +N   E   F  + +    +  P +     G  K+V+ + +N+P+GLYS SN+   F+  +R 
Sbjct:   12 PWGFRLTGGIDFNQPLIISRITPGSKSSLANLCPGDVILAIDGFGTENMTHAEAQDRIKAATDQLCLKIERAET---RIWSPQVCEDGKAHPFK-----------------INLEAEPQEFKPIGTAHNRRAQPFVAATNIGDKKQVVSSSYNTPIGLYSSSNIKDAFHGQMRG 165
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Xenopus
Match: foxi4.2 (forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GENE-487658])

HSP 1 Score: 81.6481 bits (200), Expect = 1.221e-16
Identity = 57/203 (28.08%), Postives = 88/203 (43.35%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSR--NQPSPHLVTKTSLKMNQVNPR----REYNTFNAVPSPF-------------------------VDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTI 686
            PWGFRL GG+D   P+ I +I  GS +  A L P D +L I+   TE MTH +A+  I  + +++   I R      +IW P V    K  P +   +  P  +     K N + P+       ++ ++ PS F                           +I+P +  +      K++H QFN+PM LYSD NV  +    +
Sbjct:   12 PWGFRLTGGIDFNQPLIISRITPGSKSSLANLCPGDVILAIDGFGTENMTHAEAQDRIKAATDQLCLKIERAET---RIWSPQVCEDGKAHPFKINLEAEPQDLGYFEHKHN-IRPKPFILPGRSSGSSTPSGFDPGSGRSTPSSVSTVSTIDPVELKAASRIAPNVPLEMELPGVKIVHAQFNTPMQLYSDDNVMESLQGQV 210
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Xenopus
Match: entpd8 (ectonucleoside triphosphate diphosphohydrolase 8 [Source:Xenbase;Acc:XB-GENE-996184])

HSP 1 Score: 78.5666 bits (192), Expect = 1.060e-15
Identity = 57/179 (31.84%), Postives = 86/179 (48.04%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLAS 707
            PWGFRL GG D   P+ I +++ GS A  A L   D V+ I+   T+ MTH +A+ +I    +E+  TI+R  +   KIW P V    K       P+P+   K +L  N    ++  +  N    PF        T   +    KV+  Q+N+P GLYS  N+ + FN+ +   +  S
Sbjct:   13 PWGFRLIGGKDFDQPLTISRVMPGSKAAVADLCIGDVVISIDGENTDGMTHLEAQNKIKGCEDELILTINRVES---KIWSPLVSEDGK-------PNPY---KMNLASNPQELKQIGSAHNRSAMPF--------TAASASSTPKVITAQYNNPAGLYSSDNIEN-FNSALETKSTPS 169
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Mouse
Match: Pdlim3 (PDZ and LIM domain 3 [Source:MGI Symbol;Acc:MGI:1859274])

HSP 1 Score: 95.1301 bits (235), Expect = 9.466e-22
Identity = 78/323 (24.15%), Postives = 125/323 (38.70%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA----------------------------ANLASNLESG---------------------NIKSPPSSMYCGS-----------CGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMY 959
            PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  ++ ++   I R      ++W P V    K  P +                 +N   E   F  + +    +  P +        ++V+   +NSP+GLYS SN+    +  +R                              + A+  +SG                     ++++P + ++ G+           CG  I G  V+   +   HP C  C  C + LK  GYF++  +LYC+ H +   +P      VT+Y
Sbjct:   12 PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET---RLWSPQVSEDGKAHPFK-----------------INLEAEPQEFKPIGTAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPGSLQNEPTASVPPQSDVYRMLHDNRDDPAAPRQSGSFRVLQDLVNDGPDDRPAGTRSVRAPVTKVHGGAGSAQRMPLCDKCGSGIVGAVVKARDKY-RHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTRPPEGYDTVTLY 313
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Mouse
Match: Pdlim1 (PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Acc:MGI:1860611])

HSP 1 Score: 87.0409 bits (214), Expect = 1.133e-19
Identity = 62/187 (33.16%), Postives = 85/187 (45.45%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREY----NTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLES 719
            PWGFRL GG D   P+ I ++  GS A  A L   D +  I+   T  MTH +A+ +I   A+ +T T+SR      KIW P V    K  P               KMN  +  +E     +  N    PF    +P           +V+ NQ+NSP GLYS  N+S+ FNN + +   AS  E+
Sbjct:   13 PWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSSMTHLEAQNKIKGCADNMTLTVSRSEQ---KIWSPLVTEEGKRHP--------------YKMNLASEPQEVLHIGSAHNRSAMPFTASPAP---------STRVITNQYNSPTGLYSSENISN-FNNAVESKTSASGEEA 172
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Mouse
Match: Pdlim1 (PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Acc:MGI:1860611])

HSP 1 Score: 87.8113 bits (216), Expect = 4.099e-19
Identity = 62/185 (33.51%), Postives = 83/185 (44.86%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQ--PSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLES 719
            PWGFRL GG D   P+ I ++  GS A  A L   D +  I+   T  MTH +A+ +I   A+ +T T+SR      KIW P V    K  P +      P  V       N     R    F A P+P                  +V+ NQ+NSP GLYS  N+S+ FNN + +   AS  E+
Sbjct:   13 PWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSSMTHLEAQNKIKGCADNMTLTVSRSEQ---KIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAHN-----RSAMPFTASPAPST----------------RVITNQYNSPTGLYSSENISN-FNNAVESKTSASGEEA 172
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Mouse
Match: Pdlim3 (PDZ and LIM domain 3 [Source:MGI Symbol;Acc:MGI:1859274])

HSP 1 Score: 82.4185 bits (202), Expect = 4.525e-17
Identity = 64/237 (27.00%), Postives = 90/237 (37.97%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFV----------------------------------------DKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAA-NLASNLESGNIKSPPSS 746
            PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  ++ ++   I R      ++W P V    K  P               K+N     ++ N F    N  P PF+                                         K++P I  +      K++H QFN+PM LYSD N+  T    +  A    S++       PP S
Sbjct:   12 PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET---RLWSPQVSEDGKAHP--------------FKINLEAEPQDVNYFEHKHNIRPKPFIIPGRTSGCSTPSGVDCGSGRSTPSSVSTVSTICPGDLKVAAKMAPNIPLEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVATALGETSSMSEPTASVPPQS 231
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Mouse
Match: Pdlim4 (PDZ and LIM domain 4 [Source:MGI Symbol;Acc:MGI:1353470])

HSP 1 Score: 67.0106 bits (162), Expect = 2.364e-12
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIW 410
            PWGFRL GG D  AP+ I ++ +GS A  A L P D +  IN  +TE MTH +A+  I    + +T ++SR  N   K W
Sbjct:   12 PWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSRPEN---KNW 88
[Close]
BLAST of PDZ and LIM domain protein vs. UniProt/SwissProt
Match: sp|A1ZA47|ZASP_DROME (PDZ and LIM domain protein Zasp OS=Drosophila melanogaster OX=7227 GN=Zasp52 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 9.684e-27
Identity = 75/226 (33.19%), Postives = 113/226 (50.00%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQ 806
            Q L I L R D   PWGFRL+GG D   P+ + K+ +GS++E AGLQP D V+ IN      + H+ A+  ++RS N    T+ RG +     W+P V  +  + P  N P    VTKTSL   Q + +     +N    PF        +    G VK +++ Q+N+P+G+YSD +++ T   + +A  LA  +   N K      Y G   E++K +     GQ
Sbjct:    5 QLLQIKLSRFDAQ-PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGS----TWRPHVTPTGNV-PQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF--------SNGGDGGVKSIVNKQYNTPVGIYSDESIAETL--SAQAEVLAGGVLGVNFKK-NEKEYQGDRSEVLKFLREEETGQ 213
[Close]
BLAST of PDZ and LIM domain protein vs. UniProt/SwissProt
Match: sp|O70209|PDLI3_MOUSE (PDZ and LIM domain protein 3 OS=Mus musculus OX=10090 GN=Pdlim3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.621e-21
Identity = 78/323 (24.15%), Postives = 125/323 (38.70%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA----------------------------ANLASNLESG---------------------NIKSPPSSMYCGS-----------CGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMY 959
            PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  ++ ++   I R      ++W P V    K  P +                 +N   E   F  + +    +  P +        ++V+   +NSP+GLYS SN+    +  +R                              + A+  +SG                     ++++P + ++ G+           CG  I G  V+   +   HP C  C  C + LK  GYF++  +LYC+ H +   +P      VT+Y
Sbjct:   12 PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET---RLWSPQVSEDGKAHPFK-----------------INLEAEPQEFKPIGTAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPGSLQNEPTASVPPQSDVYRMLHDNRDDPAAPRQSGSFRVLQDLVNDGPDDRPAGTRSVRAPVTKVHGGAGSAQRMPLCDKCGSGIVGAVVKARDKY-RHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTRPPEGYDTVTLY 313
[Close]
BLAST of PDZ and LIM domain protein vs. UniProt/SwissProt
Match: sp|Q9PU47|PDLI3_CHICK (PDZ and LIM domain protein 3 OS=Gallus gallus OX=9031 GN=PDLIM3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.907e-20
Identity = 51/174 (29.31%), Postives = 80/174 (45.98%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            PWGFRL GG+D   P+ I +I  GS A  A L P D ++ IN  +TE MTH  A+  I  +A++++  I R      K+W P V    K  P +                 +N   E   F  + +    +  P +        ++V+ + +NSP+GLYS  N+    +  +R+
Sbjct:   12 PWGFRLSGGIDFNQPLIITRITPGSKASTANLCPGDIIVAINGLSTENMTHNDAQERIKAAAHQLSLRIERAET---KLWSPQVSEDGKANPYK-----------------INLEAEPQEFKPIGTAHNRRAQPFVAAANIDDKRQVVSSSYNSPIGLYSSGNIQDALHGQLRS 165
[Close]
BLAST of PDZ and LIM domain protein vs. UniProt/SwissProt
Match: sp|Q3SYZ8|PDLI3_BOVIN (PDZ and LIM domain protein 3 OS=Bos taurus OX=9913 GN=PDLIM3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.783e-19
Identity = 54/192 (28.12%), Postives = 81/192 (42.19%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSS 746
            PWGFRL GG+D   P+ I +I  GS A  A L P D +L I+   TE MTH  A+  I  + +++   I R      ++W P V    K  P +                 +N   E   F  + +    +  P +        ++V+   +NSP+GLYS SN+    +  +R    +S         PP S
Sbjct:   12 PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAGHQLCLKIDRAE---ARLWSPQVTEDGKAHPFK-----------------INLESEPQEFKPIGAAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSSPQNEPTASVPPES 183
[Close]
BLAST of PDZ and LIM domain protein vs. UniProt/SwissProt
Match: sp|Q9PW72|PDLI4_CHICK (PDZ and LIM domain protein 4 OS=Gallus gallus OX=9031 GN=PDLIM4 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.193e-18
Identity = 91/322 (28.26%), Postives = 131/322 (40.68%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSR---------------NQPSPHLV------TKTSLKMNQVNPRREYNTFNAVPSPFVDKISPL------ITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAAN----------LASNLESG------NIKSPPSSMY------------------CGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPGPDMYPVT 953
            PWGFRL GG D   P+ I +I  GS A  A L P D +L IN  +TE MTH +A+ +I     ++  ++SR      + W P ++   K    R                +P PH        ++ +L +    P R + + +A      D   PL      I+  QS    K +    N   G+  +S+V     +  R A+          L   LE+G      +  S P S+                   C  CG  I G  V+   ++  HP C  C  CG+ LK  GYF+I  QLYC+ H K+  KP P+ Y V 
Sbjct:   12 PWGFRLVGGKDFSTPLTISRINPGSKAALANLCPGDIILAINGESTEAMTHLEAQNKIKACVEQLLLSVSRAEE---RSWSPPILEDGKAQAYRINIEPEPQDNGPAVGKRPMPHAAGGSPVDSRPALSLQHPQPSRPHASSSA------DAALPLQLSGLHISPSQSTDPLKSLPRNRN---GIDVESDVYKMLQDYERPASEPKQSGSFRYLQGMLEAGENGEKLDRLSNPRSIKPAGPKLGAAMSGLQMLPECTRCGNGIVGTIVKARDKL-YHPECFMCDDCGLNLKQRGYFFIEEQLYCETHAKERVKP-PEGYDVV 319
[Close]
BLAST of PDZ and LIM domain protein vs. TrEMBL
Match: A0A4Z2DSD9 (PDZ and LIM domain protein OS=Schistosoma japonicum OX=6182 GN=EWB00_009050 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 5.512e-65
Identity = 145/323 (44.89%), Postives = 182/323 (56.35%), Query Frame = 3 
Query:  126 SQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRG-------------SNP---------PIK--------IWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNT-FNAVPSPFVDKISP------LITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNI------KSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQ-TPKPGPDMYPVTMYK 962
            SQ   I L R DTSIPWGFRLEGG D G  I I  +  GSIA+Y+GL+  D+V+ IN+S T+ M HE AKMEIIRS+N++   + RG             S+P         PI         IWQP VVSS ++ P+ NQ      T  SL+  Q N         N  P PF    SP       + +   GR +K+ H+ +NSPMGLY+  N + TF  T+ +A+   N    +        SPP SMYCGSCG  I+GVFV+V G++PMHP CLKCCKCGIGL+N+GYFYI  QLYC+ H KQ  P P P M  V +YK
Sbjct:    3 SQLCSIRLVRQDTSIPWGFRLEGGTDFGHSIMIQHVNPGSIADYSGLRAGDHVIRINQSETKFMRHEDAKMEIIRSSNDLELYVQRGEILNSYTHQNNLSSSPMHTLSRSPKPISPQPMNKQTIWQPKVVSSIQMSPNHNQQQHEYGTHVSLEATQNNEDLSIGVKHNISPLPFGQ--SPPAPGENFLAKVGEGRYRKISHSSYNSPMGLYNQKNRNQTFERTLSSASSTGNQYDNSTPQQVSPTSPP-SMYCGSCGGFIRGVFVKVQGRVPMHPECLKCCKCGIGLRNIGYFYIKEQLYCETHAKQAAPPPQPGMKAVVVYK 322
[Close]
BLAST of PDZ and LIM domain protein vs. TrEMBL
Match: A0A0R3TGR1 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS6248 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.059e-63
Identity = 121/292 (41.44%), Postives = 171/292 (58.56%), Query Frame = 3 
Query:  126 SQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREY---------NTFNAVPSPFVDK---ISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQ-TPKPGPDMYPVTMYK 962
            +Q L + L RSD+SI WGFRLEGGVD+G P+ I +I  GS+AE  GL+  DYVL IN++ T  +THEQAKMEIIRS+N+    + RG  PP    Q    +++ I+   +      V +  +   Q N +  +          + N  P PF        P++ ++Q GR  +++H+++NSPMGLYS  N +++F N +     A++  SG  K     + CG+CG  I GV V+VHG IPMHP CL C  C I L+NVGYFYIN++LYC+ H ++ +P P   M    MYK
Sbjct:    3 AQLLTLKLIRSDSSIQWGFRLEGGVDVGHPLNIQRITDGSVAERCGLRAGDYVLRINKTDTRNLTHEQAKMEIIRSSNDFEILVQRGGAPP----QFKTTTTSTIIQPMSAKVEETVIRRVMNNGQANLKSAFAAPYVPPVGASHNVNPVPFGQAPLPGQPVVVRNQEGRTHRILHSEYNSPMGLYSQRNATTSFENALSQTG-ATSPSSGAPK-----LTCGACGGPIAGVMVKVHGSIPMHPDCLICSVCRINLRNVGYFYINDKLYCETHARKVSPLPNQGMRAGVMYK 284
[Close]
BLAST of PDZ and LIM domain protein vs. TrEMBL
Match: A0A5J4NTX3 (Uncharacterized protein OS=Paragonimus westermani OX=34504 GN=DEA37_0010307 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.667e-63
Identity = 135/322 (41.93%), Postives = 181/322 (56.21%), Query Frame = 3 
Query:  126 SQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRG------SNPPI--------------------KIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYN-----TFNAVPSPFVDK----ISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIR-----AANLASNLESGNI--KSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQ-TPKPGPDMYPVTMYK 962
            +Q   + L R DTSIPWGFRLEGGVD+G  + I ++  GS+A+Y GL+  D V+ INRS T+ M HE AKMEIIRS N+I   I RG      S+ P+                     +WQP +V +     S   P   L T+TSL+       + Y+     + N  P PF          L+ Q   GR +++ H+ +NSPMGLY+ +N++ TF  T+        N  +   SG    ++   + YCGSCGE I+ VFVRV G++PMHP CLKCCKCG+GL+NVGYFYI+ +LYC+ H KQ  P P P M PV +YK
Sbjct:    3 TQLHTVRLTREDTSIPWGFRLEGGVDIGHAVNIQRVQPGSVADYCGLRAGDQVIRINRSETKWMRHEDAKMEIIRSGNDIEMLIERGGVHVVKSSAPVTMMPSNNWDRSLPSQTITTGAVWQPKIVRA-----SHTGPQNVLTTRTSLEATS----QRYDESIGVSHNVSPLPFGQAPPKPGESLVAQGTDGRFRQIKHSSYNSPMGLYTTNNLNQTFERTVSTVSSTGVNRPTPRPSGGARPRTDTETKYCGSCGEFIRDVFVRVQGRVPMHPECLKCCKCGVGLRNVGYFYIDEKLYCERHAKQAAPPPEPGMKPVVVYK 315
[Close]
BLAST of PDZ and LIM domain protein vs. TrEMBL
Match: A0A183LU57 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS7332 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.858e-62
Identity = 142/324 (43.83%), Postives = 185/324 (57.10%), Query Frame = 3 
Query:  126 SQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITF-----------------------TISRGSNP----PIK---IWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFVDKISP------LITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIK--SP--PSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQ-TPKPGPDMYPVTMYK 962
            SQ   I L R DTSIPWGFRLEGG D G PI I  +  GSIA+Y+GL+  D+V+ IN+S T+ M H+ AKMEIIRS+N++                         ++SR   P    P+    IWQP +VSS ++ P+ N  + H    T + +   +   E ++     N  P PF    SP      ++T+   GR +K+ H+ +NSPMGLY+  N + TF  T+  +N   N   G     SP  P SMYCGSCG  I+GVFV+V G+IPMHP CLKCCKCGIGL+N+GYFYI  QLYC+ H KQ  P P P M  V +YK
Sbjct:    3 SQHCSIRLIRQDTSIPWGFRLEGGTDFGHPITIQHVNPGSIADYSGLRAGDHVIRINQSETKWMRHDDAKMEIIRSSNDLELFVQRNEIINQYTHQNNFSPSPKHSLSRSPKPVSPQPVSRQTIWQPKIVSSVQMSPNSNHNN-HQAYGTHVNLEATSRNEESSSIGVKHNISPLPFGQ--SPPAPGENVLTKVGEGRYRKISHSSYNSPMGLYNQKNRNQTFERTL--SNATGNQLDGTAPQVSPTTPPSMYCGSCGGFIRGVFVKVQGRIPMHPECLKCCKCGIGLRNIGYFYIKEQLYCETHAKQAAPPPEPGMKAVVVYK 321
[Close]
BLAST of PDZ and LIM domain protein vs. TrEMBL
Match: A0A430QSA5 (Uncharacterized protein OS=Schistosoma bovis OX=6184 GN=DC041_0009011 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.862e-61
Identity = 139/324 (42.90%), Postives = 183/324 (56.48%), Query Frame = 3 
Query:  126 SQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITF-----------------------TISRGSNP----PIK---IWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFVDKISP------LITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIK----SPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQ-TPKPGPDMYPVTMYK 962
            SQ   I L R DTSIPWGFRLEGG D G  I I  +  GSIA+Y+GL+  D+V+ IN+S T+ M H+ AKMEIIRS+N++                         ++SR   P    P+    IWQP +VSS ++ P+ N  + H    T + +   +   E ++     N  P PF    SP      ++T+   GR +K+ H+ +NSPMGLY+  N + TF  T+  +N   N   G       + P SMYCGSCG  I+GVFV+V G+IPMHP CLKCCKCGIGL+N+GYFYI  QLYC+ H KQ  P P P M  V +YK
Sbjct:    3 SQHCSIRLIRQDTSIPWGFRLEGGTDFGHSITIQHVNPGSIADYSGLRAGDHVIRINQSETKWMRHDDAKMEIIRSSNDLELFVQRNEIINQYTHQNNFSPSPKHSLSRSPKPVSPQPVSRQTIWQPKIVSSVQMSPNSNHNN-HQAYGTHVNLEATSKNEESSSIGVKHNISPLPFGQ--SPPAPGENVLTKVGEGRYRKISHSSYNSPMGLYNQKNRNQTFERTL--SNATGNQHDGTAPQVSPTTPPSMYCGSCGGFIRGVFVKVQGRIPMHPECLKCCKCGIGLRNIGYFYIKEQLYCETHAKQAAPPPEPGMKAVVVYK 321
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Cavefish
Match: pdlim3a (PDZ and LIM domain protein 3-like [Source:NCBI gene;Acc:103042722])

HSP 1 Score: 95.1301 bits (235), Expect = 8.921e-22
Identity = 91/318 (28.62%), Postives = 128/318 (40.25%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTF----NAVPSPFV------DKI--------SPL-------ITQDQSGRVKKVMHNQFNSPMGLYS--DSNV------------------SSTFN----------------NTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKP 929
            D   PWGFRL GG D   P+ I +I SGS A    L P D +L I+   T  M H  A+  I  + +++T TI R   P  ++W P V    +  P               K+N  + R+E+       N   +PFV      DK         SP+       I     G+++ ++HN+  SP  L S  +S+V                  S +F                  T+RA        +GN+   P    C  CG  I G  V+V  +   HP C  C  C   LK  GYF+I+N+LYC+ H +   KP
Sbjct:    8 DGPAPWGFRLIGGKDFNQPLTIARISSGSKASMVDLSPGDIILAIDGIATANMLHCDAQNHIREATDQLTLTIER---PEAQLWSPRVNEDGRAHP--------------FKINLESERQEFRPIGTGHNRRAAPFVAAANIDDKRQVVSSAYNSPIGLYSSGNIQDALHGQLRGLIHNKPESPRILTSIEESDVYRMLQKDKTEEEPHEPRQSGSFKALQDYINSEGTRPLVTRTVRAPTTKPPTPAGNLHKLP---MCDKCGNGIVGTVVKVQDKY-RHPGCFVCSDCEENLKQKGYFFIDNELYCETHARARSKP 304
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Cavefish
Match: pdlim3b (PDZ and LIM domain protein 3 [Source:NCBI gene;Acc:103035000])

HSP 1 Score: 88.9669 bits (219), Expect = 1.377e-19
Identity = 48/174 (27.59%), Postives = 77/174 (44.25%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            PWGFRL GG D   P+ + ++  GS A    L P D +L I   +TE MTH +A+ +I  S  ++   I R   P  K+W P V+   K  P +                 +N   E   +  + +    +  P +        ++V+ + +N+P+GLYS  N+    +  IR 
Sbjct:   12 PWGFRLSGGKDFNQPLTVTRVTPGSKAALVNLTPGDVILAIEGVSTEGMTHGEAQNKIKDSTYQLCLKIER---PETKLWSPQVMEEGKTHPFK-----------------INLEAEQQEYKPIGTGHNRRAQPFVAAANLDEKRQVVSSSYNTPIGLYSQGNIQDALHGQIRG 165
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Cavefish
Match: pdlim3b (PDZ and LIM domain protein 3 [Source:NCBI gene;Acc:103035000])

HSP 1 Score: 88.9669 bits (219), Expect = 2.124e-19
Identity = 48/174 (27.59%), Postives = 77/174 (44.25%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            PWGFRL GG D   P+ + ++  GS A    L P D +L I   +TE MTH +A+ +I  S  ++   I R   P  K+W P V+   K  P +                 +N   E   +  + +    +  P +        ++V+ + +N+P+GLYS  N+    +  IR 
Sbjct:   12 PWGFRLSGGKDFNQPLTVTRVTPGSKAALVNLTPGDVILAIEGVSTEGMTHGEAQNKIKDSTYQLCLKIER---PETKLWSPQVMEEGKTHPFK-----------------INLEAEQQEYKPIGTGHNRRAQPFVAAANLDEKRQVVSSSYNTPIGLYSQGNIQDALHGQIRG 165
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Cavefish
Match: pdlim3b (PDZ and LIM domain protein 3 [Source:NCBI gene;Acc:103035000])

HSP 1 Score: 87.0409 bits (214), Expect = 7.387e-19
Identity = 58/189 (30.69%), Postives = 89/189 (47.09%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFV------DKISPLITQD--QS------GRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAA 695
            PWGFRL GG D   P+ + ++  GS A    L P D +L I   +TE MTH +A+ +I  S  ++   I R   P  K+W P V+   K  P           K +L+  Q +     + FN  P PF+      D  S  + ++  QS      G+ + +  +Q+NSP+ LYSD+++S        +A
Sbjct:   12 PWGFRLSGGKDFNQPLTVTRVTPGSKAALVNLTPGDVILAIEGVSTEGMTHGEAQNKIKDSTYQLCLKIER---PETKLWSPQVMEEGKTHP----------FKINLEAEQQDLGYFEHKFNVRPKPFIPGGQSRDNTSQGVMRNALQSVPVTNLGQNEALALSQYNSPINLYSDASLSEALQQAQMSA 187
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Cavefish
Match: pdlim1 (PDZ and LIM domain 1 [Source:NCBI gene;Acc:103027512])

HSP 1 Score: 73.559 bits (179), Expect = 2.419e-14
Identity = 56/176 (31.82%), Postives = 78/176 (44.32%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREY----NTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTI 686
            PWGFRL GG D   P+ I ++  GS A  A L   D +L I+   TE MTH +A+ +I     E+  +I R  +   K+W P V    K  P R              MN  +  +E     +  N    PF    S +IT            +Q+N+P GLYS  N+ S FN+ +
Sbjct:   12 PWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDMILAIDGEPTEGMTHLEAQNKIKGCVEEMVLSIDRSES---KMWSPLVSEEGKSHPYR--------------MNLASEPQEVKHIGSAHNRSALPFNSPGSRVIT------------SQYNNPAGLYSSENIQS-FNSAV 157
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002484.1 (pep scaffold:Pmarinus_7.0:GL476548:370238:411117:1 gene:ENSPMAG00000002245.1 transcript:ENSPMAT00000002484.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 89.3521 bits (220), Expect = 3.281e-20
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILP------SRNQPSPHLVTKTSLKMNQVNPRREYNTF---NAVPSPFVDKISPLIT-------QDQSGRVK--------------KVMHNQFNSPMGLYSDSNVSSTFNNTIRAA 695
            PWGFRL GG D+  P+ I ++  GS+A  A L P D +L I     E MTH +A+ E I++ +  T T+ +   P   +W+P V+   K+ P      S  Q   +   K + +     P R  +T    +AVPS    + +P +T       QD     +              KV H QFNSPM LYS  N+  +    + +A
Sbjct:   12 PWGFRLVGGRDLDQPLTISRVTPGSVASSANLSPGDVILAIEGENAEEMTHAEAQ-ERIKACSTATLTL-KIDRPQTTLWRPNVLEEGKVHPYKVNLASEPQDEDYFEHKFNARPKPYVPPRSRSTASLRHAVPSVSSGRNTPSVTSLLSVNPQDLKDMARAAPNKPIEVEVPGMKVFHAQFNSPMQLYSQDNIMDSLQGQVSSA 214
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007081.1 (pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-1 gene:ENSPMAG00000006392.1 transcript:ENSPMAT00000007081.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 68.9366 bits (167), Expect = 4.182e-13
Identity = 49/176 (27.84%), Postives = 78/176 (44.32%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKK------------VMHNQFNSPMGLYSDSNV 662
            PWGFRL+GG D   P+ I +I  GS A  A + P D VL I+ + T+ MTH +A+ +I  S   +  T+ R         Q  V + A          PH     +     V P+++  T N   +  +   SP + +D      K            ++H Q+N+P+ +YS  ++
Sbjct:   13 PWGFRLQGGKDFNMPLTISRISPGSKAAQATVVPGDVVLQIDGTPTDSMTHLEAQTKIKNSVGNLRLTLQRSK------LQGRVTTGA----------PH-----ADGTRAVTPQQQVYTANTAKTRSLPPPSPALLKDSLAFAHKPIAVTGPGGQATIIHAQYNTPISMYSQDSI 167
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Nematostella
Match: EDO30217 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T1F1])

HSP 1 Score: 63.929 bits (154), Expect = 3.888e-13
Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISR 383
            PWGFRL+GG D  AP++I K+  GS AE AG++P  YV  IN    E M+H  A   I R+   +   + +
Sbjct:   16 PWGFRLQGGKDFRAPLKIAKVEQGSKAERAGIRPNLYVRSINNDPCETMSHGDALNNIKRTGTNLNLLLCK 86
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Nematostella
Match: EDO47763 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKY1])

HSP 1 Score: 54.6842 bits (130), Expect = 8.195e-10
Identity = 28/75 (37.33%), Postives = 39/75 (52.00%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISR 383
            D   PWGFRL+GG D G    + ++  G  A   GL+  D +L IN    E MTH +A+  I R+ N +   + R
Sbjct:   11 DGGGPWGFRLKGGKDFGQIPTVSQLTPGGKAITNGLRVEDQILSINGMGCEDMTHMEAQESIKRTGNALRLQVRR 85
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Nematostella
Match: EDO42539 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S157])

HSP 1 Score: 52.373 bits (124), Expect = 2.073e-7
Identity = 32/102 (31.37%), Postives = 55/102 (53.92%), Query Frame = 3 
Query:   81 KTASNKFRVH*NWKMSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAG-LQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISR 383
            K+ S   R     +++Q L I+L R +    +GF + GG +M  PI ++KI  G +A+  G ++  D VL IN  +T+ M H  A + +IR  +++   + R
Sbjct: 1032 KSESELMRDPRTGEVTQVLEIELIRKNQG--YGFSIRGGQEMDMPIYVLKIAEGGVADLDGRIKVGDEVLEINGRSTQHMLHTDA-ISMIRGGSKVRLVLRR 1130
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Nematostella
Match: EDO44244 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWE0])

HSP 1 Score: 50.8322 bits (120), Expect = 4.812e-7
Identity = 23/68 (33.82%), Postives = 44/68 (64.71%), Query Frame = 3 
Query:  174 WGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTI 377
            +GF + GG + G  + +  I +GS++E  GL P D++L +N    + +TH+QA ++IIRS+ +++  +
Sbjct:  131 FGFCMRGGSEHGVGLYVSSIDTGSVSEAIGLLPGDHILAVNDVNFDGLTHDQA-VKIIRSSKKLSVVV 197
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Nematostella
Match: EDO48682 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIC6])

HSP 1 Score: 45.4394 bits (106), Expect = 1.940e-6
Identity = 24/74 (32.43%), Postives = 39/74 (52.70%), Query Frame = 3 
Query:  177 GFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPP 398
            GF L GG + G  I +  +  GS+AE AG +  D +L +N  + E + H++A ++ I+S   I  T+      P
Sbjct:   24 GFNLRGGAEYGLGIYVSGVDQGSLAEQAGFRVGDQILNVNDKSFENIKHKEA-VDFIKSNKHIIVTLKAAGKLP 96
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Medaka
Match: pdlim3a (PDZ and LIM domain 3 [Source:NCBI gene;Acc:101158506])

HSP 1 Score: 81.2629 bits (199), Expect = 7.332e-17
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3 
Query:  159 DTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRA 692
            D   PWGFRL GG D   P+ I +I  GS A  A L P D +L I       M H +A+ +I  S+ ++  T+ R  +   ++W P V+   +  P               K++    ++EY    A  +    +  P I        ++V+   +N+P+GLYS  N+       IR 
Sbjct:   41 DGPAPWGFRLTGGRDFNQPLTISRITPGSKASSANLCPGDVILAIEGVPATDMLHCEAQNKIKESSKQLCLTVERNQS---RLWSPHVMEDGRAHP--------------FKVDLETKQQEYKPIGATHN---RRAQPFIAAANIDDKRQVVSTSYNTPIGLYSSGNIQDAMEGQIRG 198
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Medaka
Match: pdlim1 (PDZ and LIM domain 1 [Source:NCBI gene;Acc:101156764])

HSP 1 Score: 77.7962 bits (190), Expect = 9.159e-16
Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREY----NTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNV 662
            PWGFRL GG D   P+ I ++ +GS A  A L   D +L I+   T+ MTH +A+ +I    +E+  ++ R      K+W P      K  P               KMN  +  RE     +T N    PF            +G   KV+ NQ+NSP GLYS  N+
Sbjct:   12 PWGFRLVGGKDFEQPLAISRVNTGSKAAQANLCIGDIILAIDGEPTDNMTHLEAQNKIKACGDEMVLSVDRSE---AKLWSPLSADEGKSHP--------------YKMNLASEPREVKHIGSTHNRSALPF------------AGFGPKVVTNQYNSPSGLYSSDNI 150
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Medaka
Match: ldb3a (LIM domain-binding protein 3 [Source:NCBI gene;Acc:101165171])

HSP 1 Score: 68.5514 bits (166), Expect = 7.543e-13
Identity = 51/196 (26.02%), Postives = 87/196 (44.39%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTS-----LKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPS 743
            PWGFRL+GG D   P+ I +I  GS A    L   D ++ I+  +TE MTH +A+ +I  + + +  T+S+   PP  +  P + S   ++P   Q  P   T        LK N ++  +            ++   P       G    ++H Q+N+P+ +YS   +     + I   + A   ++G    PP+
Sbjct:   13 PWGFRLQGGKDFNMPLTISRITPGSKAALGNLIQGDVIVAIDGVSTEGMTHLEAQNKIKMANHSLALTMSKSKRPP-PLAAPRIDSGISMIP-HQQAFPLAATNAGFNPGMLKENTISTHKA-----------IEVTGP-------GGKATIIHAQYNTPISMYSQDAIM----DAIAGQSQAKGHDAGQYGPPPT 184
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Medaka
Match: pdlim4 (PDZ and LIM domain 4 [Source:NCBI gene;Acc:101166681])

HSP 1 Score: 67.781 bits (164), Expect = 2.422e-12
Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSN 392
            PWGFRL GG D   P+ + ++  GS A    L P D +L IN  +TE MTH +A+  I     ++T +ISR  N
Sbjct:   12 PWGFRLVGGRDFSTPLTVSRVTPGSKAAQGDLCPGDTILTINGDSTEHMTHMEAQNRIKTCTQQLTLSISRYGN 85
[Close]
BLAST of PDZ and LIM domain protein vs. Ensembl Medaka
Match: ldb3a (LIM domain-binding protein 3 [Source:NCBI gene;Acc:101165171])

HSP 1 Score: 67.781 bits (164), Expect = 5.670e-12
Identity = 46/169 (27.22%), Postives = 77/169 (45.56%), Query Frame = 3 
Query:  171 PWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTS-----LKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNV 662
            PWGFRL+GG D   P+ I +I  GS A    L   D ++ I+  +TE MTH +A+ +I  + + +  T+S+   PP  +  P + S   ++P   Q  P   T        LK N ++  +            ++   P       G    ++H Q+N+P+ +YS   +
Sbjct:   13 PWGFRLQGGKDFNMPLTISRITPGSKAALGNLIQGDVIVAIDGVSTEGMTHLEAQNKIKMANHSLALTMSKSKRPP-PLAAPRIDSGISMIP-HQQAFPLAATNAGFNPGMLKENTISTHKA-----------IEVTGP-------GGKATIIHAQYNTPISMYSQDAI 161
[Close]
BLAST of PDZ and LIM domain protein vs. Planmine SMEST
Match: SMESG000015397.1 (SMESG000015397.1)

HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 3 
Query:  123 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPAXXXXXXXXXXXXNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMYK 962
            MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPACLKCCKCGIGLKNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMYK
Sbjct:    1 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTVVSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISPLITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESGNIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPACLKCCKCGIGLKNVGYFYINNQLYCDVHVKQTPKPGPDMYPVTMYK 280
[Close]
BLAST of PDZ and LIM domain protein vs. Planmine SMEST
Match: SMESG000015639.1 (SMESG000015639.1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.090e-19
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISR 383
            +T+++ LRR+ T  PWGF L+GG D G P+ + K+    IA  +GL+P D ++ I  S     TH Q K EI+R+ NEI FT+ +
Sbjct:    4 ETIVLSLRRTVTDKPWGFVLQGGSDQGLPVFVHKVTRNGIAHKSGLEPGDVIIQIGNSQLTGKTHAQIKAEILRAGNEIDFTVKK 88
[Close]
BLAST of PDZ and LIM domain protein vs. Planmine SMEST
Match: SMESG000032524.1 (SMESG000032524.1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.792e-17
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:  123 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTI-SRGSN 392
            MS+ +++ LRR +T   WGF L+GG D G PI I K++  SI   AGL P D +L IN  T   MT+E+ K  I+R+ NE+   +  RG N
Sbjct:    1 MSEIIVLFLRRDNTDKSWGFVLQGGSDQGLPIFIHKLMRQSIGHKAGLDPGDVILRINGQTLLGMTNEEVKAIILRAGNEMEMRVKKRGFN 91
[Close]
BLAST of PDZ and LIM domain protein vs. Planmine SMEST
Match: SMESG000032524.1 (SMESG000032524.1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.151e-16
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:  123 MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTI-SRGSN 392
            MS+ +++ LRR +T   WGF L+GG D G PI I K++  SI   AGL P D +L IN  T   MT+E+ K  I+R+ NE+   +  RG N
Sbjct:   14 MSEIIVLFLRRDNTDKSWGFVLQGGSDQGLPIFIHKLMRQSIGHKAGLDPGDVILRINGQTLLGMTNEEVKAIILRAGNEMEMRVKKRGFN 104
[Close]
BLAST of PDZ and LIM domain protein vs. Planmine SMEST
Match: SMESG000023284.1 (SMESG000023284.1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.728e-11
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 3 
Query:  129 QTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQPADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPI 401
            QTL + L R + S PWGFRL+GG D G P+ + ++ SGS AE   LQ  D + +I+ S  E  T +Q +  I  S +++ F + R  N  I
Sbjct:    2 QTLNLRLTRDNLSRPWGFRLQGGSDTGYPLSVQRVFSGSPAE-GILQRNDEIKIIDNSDVEHGTLKQVQDLIRTSGSQLNFIVVRDPNKEI 91
The following BLAST results are available for this feature:
BLAST of PDZ and LIM domain protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PDLIM33.405e-2529.77PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
PDLIM31.972e-2028.85PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
PDLIM12.653e-1930.43PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:... [more]
PDLIM31.463e-1828.51PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
PDLIM31.166e-1534.59PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
alp-11.107e-1325.89ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
alp-12.264e-1325.48ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
alp-12.751e-1325.48ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
alp-14.515e-1326.43ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
C45G9.78.857e-629.35pep chromosome:WBcel235:III:5046170:5047161:-1 gen... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Zasp522.926e-3133.78gene:FBgn0265991 transcript:FBtr0329910[more]
Zasp522.706e-2933.78gene:FBgn0265991 transcript:FBtr0302163[more]
Zasp522.706e-2933.78gene:FBgn0265991 transcript:FBtr0392918[more]
Zasp526.687e-2933.78gene:FBgn0265991 transcript:FBtr0329909[more]
Zasp521.418e-2833.78gene:FBgn0265991 transcript:FBtr0329915[more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pdlim3b2.121e-2031.53PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-06... [more]
pdlim3b4.650e-2031.87PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-06... [more]
pdlim3b4.650e-2031.87PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-06... [more]
pdlim3a9.045e-2025.62PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-05... [more]
pdlim3a1.162e-1728.09PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-05... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
foxi4.21.880e-2327.40forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GEN... [more]
foxi4.26.802e-2229.89forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GEN... [more]
foxi4.21.150e-2129.89forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GEN... [more]
foxi4.21.221e-1628.08forkhead box I4, gene 2 [Source:Xenbase;Acc:XB-GEN... [more]
entpd81.060e-1531.84ectonucleoside triphosphate diphosphohydrolase 8 [... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pdlim39.466e-2224.15PDZ and LIM domain 3 [Source:MGI Symbol;Acc:MGI:18... [more]
Pdlim11.133e-1933.16PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Ac... [more]
Pdlim14.099e-1933.51PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Ac... [more]
Pdlim34.525e-1727.00PDZ and LIM domain 3 [Source:MGI Symbol;Acc:MGI:18... [more]
Pdlim42.364e-1242.50PDZ and LIM domain 4 [Source:MGI Symbol;Acc:MGI:13... [more]
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BLAST of PDZ and LIM domain protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|A1ZA47|ZASP_DROME9.684e-2733.19PDZ and LIM domain protein Zasp OS=Drosophila mela... [more]
sp|O70209|PDLI3_MOUSE6.621e-2124.15PDZ and LIM domain protein 3 OS=Mus musculus OX=10... [more]
sp|Q9PU47|PDLI3_CHICK9.907e-2029.31PDZ and LIM domain protein 3 OS=Gallus gallus OX=9... [more]
sp|Q3SYZ8|PDLI3_BOVIN6.783e-1928.13PDZ and LIM domain protein 3 OS=Bos taurus OX=9913... [more]
sp|Q9PW72|PDLI4_CHICK1.193e-1828.26PDZ and LIM domain protein 4 OS=Gallus gallus OX=9... [more]
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BLAST of PDZ and LIM domain protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4Z2DSD95.512e-6544.89PDZ and LIM domain protein OS=Schistosoma japonicu... [more]
A0A0R3TGR12.059e-6341.44Uncharacterized protein OS=Rodentolepis nana OX=10... [more]
A0A5J4NTX33.667e-6341.93Uncharacterized protein OS=Paragonimus westermani ... [more]
A0A183LU574.858e-6243.83Uncharacterized protein OS=Schistosoma margrebowie... [more]
A0A430QSA51.862e-6142.90Uncharacterized protein OS=Schistosoma bovis OX=61... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pdlim3a8.921e-2228.62PDZ and LIM domain protein 3-like [Source:NCBI gen... [more]
pdlim3b1.377e-1927.59PDZ and LIM domain protein 3 [Source:NCBI gene;Acc... [more]
pdlim3b2.124e-1927.59PDZ and LIM domain protein 3 [Source:NCBI gene;Acc... [more]
pdlim3b7.387e-1930.69PDZ and LIM domain protein 3 [Source:NCBI gene;Acc... [more]
pdlim12.419e-1431.82PDZ and LIM domain 1 [Source:NCBI gene;Acc:1030275... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSPMAT00000002484.13.281e-2030.73pep scaffold:Pmarinus_7.0:GL476548:370238:411117:1... [more]
ENSPMAT00000007081.14.182e-1327.84pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of PDZ and LIM domain protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO302173.888e-1342.25Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO477638.195e-1037.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO425392.073e-731.37Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO442444.812e-733.82Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO486821.940e-632.43Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of PDZ and LIM domain protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pdlim3a7.332e-1727.53PDZ and LIM domain 3 [Source:NCBI gene;Acc:1011585... [more]
pdlim19.159e-1632.14PDZ and LIM domain 1 [Source:NCBI gene;Acc:1011567... [more]
ldb3a7.543e-1326.02LIM domain-binding protein 3 [Source:NCBI gene;Acc... [more]
pdlim42.422e-1241.89PDZ and LIM domain 4 [Source:NCBI gene;Acc:1011666... [more]
ldb3a5.670e-1227.22LIM domain-binding protein 3 [Source:NCBI gene;Acc... [more]
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BLAST of PDZ and LIM domain protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000015397.10.000e+0100.00SMESG000015397.1[more]
SMESG000015639.19.090e-1942.35SMESG000015639.1[more]
SMESG000032524.19.792e-1743.96SMESG000032524.1[more]
SMESG000032524.11.151e-1643.96SMESG000032524.1[more]
SMESG000023284.13.728e-1139.56SMESG000023284.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011528 ID=SMED30011528|Name=PDZ and LIM domain protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1076bp
CACTTTTAGAAAAATGTGCAAAATTGTGCTAGTCGATCCGACAGCAACAT
GTGATAATTTGTTGTGTGTTAGTTGGGTTTAAAACTGCTTCAAATAAATT
TCGTGTTCATTGAAACTGGAAAATGTCGCAAACGCTAATTATTGATTTAC
GAAGATCTGACACTTCTATTCCATGGGGTTTTCGTTTGGAAGGTGGTGTA
GATATGGGAGCCCCAATACGAATTATGAAAATAGTTTCCGGAAGTATCGC
TGAATATGCTGGTTTGCAGCCTGCAGATTATGTGCTCCTGATCAACCGAT
CAACCACTGAAAGGATGACCCATGAACAAGCAAAAATGGAAATTATTAGA
TCAGCGAATGAAATTACTTTTACAATTTCCAGAGGATCTAATCCACCAAT
AAAAATATGGCAACCAACCGTGGTTTCATCTGCAAAGATTTTGCCATCTC
GAAACCAACCATCTCCTCATTTGGTAACTAAGACCTCTTTAAAAATGAAT
CAAGTAAATCCTAGACGAGAATATAATACTTTCAATGCGGTTCCGTCTCC
TTTTGTCGATAAAATTTCACCGTTGATTACCCAGGATCAATCAGGTCGAG
TTAAAAAAGTCATGCATAACCAATTTAATTCTCCAATGGGACTTTATTCT
GACTCAAATGTTTCATCTACATTCAACAACACAATCAGAGCTGCTAATTT
GGCCTCAAATTTAGAGTCAGGAAATATCAAGTCGCCTCCATCGTCAATGT
ACTGTGGCTCATGTGGCGAAATTATCAAAGGGGTTTTTGTTCGAGTCCAT
GGTCAAATTCCAATGCATCCAGCTTGTTTGAAGTGTTGCAAATGTGGAAT
CGGTTTAAAAAATGTCGGTTACTTTTACATTAACAACCAATTATATTGCG
ATGTTCACGTGAAACAAACCCCAAAACCGGGACCCGACATGTACCCGGTA
ACTATGTACAAGTGATTAATGCTAGTTTGAAAACAACTCGCATGTAACTT
ATCTCAAGATGATCAACTAATTGCTCTTTCCTATCCCTTCCTAGGTGTAG
TGATATCCAAATAAAGTTTAATAAAC
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protein sequence of SMED30011528-orf-1

>SMED30011528-orf-1 ID=SMED30011528-orf-1|Name=SMED30011528-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=281bp
MSQTLIIDLRRSDTSIPWGFRLEGGVDMGAPIRIMKIVSGSIAEYAGLQP
ADYVLLINRSTTERMTHEQAKMEIIRSANEITFTISRGSNPPIKIWQPTV
VSSAKILPSRNQPSPHLVTKTSLKMNQVNPRREYNTFNAVPSPFVDKISP
LITQDQSGRVKKVMHNQFNSPMGLYSDSNVSSTFNNTIRAANLASNLESG
NIKSPPSSMYCGSCGEIIKGVFVRVHGQIPMHPACLKCCKCGIGLKNVGY
FYINNQLYCDVHVKQTPKPGPDMYPVTMYK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
Vocabulary: INTERPRO
TermDefinition
IPR031847DUF4749
IPR036034PDZ_sf
IPR006643Zasp-like_motif
IPR001478PDZ
IPR001781Znf_LIM
Vocabulary: molecular function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0046872metal ion binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006643Zasp-like motifSMARTSM00735zasp_3coord: 162..187
e-value: 3.7E-8
score: 43.1
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 210..262
e-value: 2.4E-6
score: 37.1
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 211..262
e-value: 1.6E-6
score: 28.2
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 209..269
score: 10.197
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 16..89
e-value: 1.4E-9
score: 47.8
IPR001478PDZ domainPFAMPF00595PDZcoord: 10..85
e-value: 3.4E-10
score: 40.1
IPR001478PDZ domainPROSITEPS50106PDZcoord: 6..89
score: 14.697
IPR031847Domain of unknown function DUF4749PFAMPF15936DUF4749coord: 162..191
e-value: 4.5E-6
score: 27.7
IPR036034PDZ superfamilyGENE3DG3DSA:2.30.42.10coord: 9..106
e-value: 1.8E-19
score: 71.3
IPR036034PDZ superfamilySUPERFAMILYSSF50156PDZ domain-likecoord: 12..90
NoneNo IPR availableGENE3DG3DSA:2.10.110.10coord: 198..266
e-value: 3.0E-11
score: 45.1
NoneNo IPR availablePANTHERPTHR24214FAMILY NOT NAMEDcoord: 210..279
coord: 15..108
NoneNo IPR availablePANTHERPTHR24214:SF7PDZ AND LIM DOMAIN PROTEIN 3coord: 210..279
coord: 15..108
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 7..85
e-value: 6.78143E-17
score: 71.829
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 238..265